strain description source location cluster AFS058113 B.thuringiensis AFS058113 Plant, core (2014) USA, North Carolina clusterIV AFS034981 B.toyonensis AFS034981 Plant, Corn core (2014) USA, Illinois clusterV NRRLB-23152 B.thuringiensis malayensis NRRLB-23152 Animal, Insect, Isoptera (2013) UK clusterIII AFS070891 B.cereus AFS070891 Plant, Corn (2014) USA, Iowa clusterIV AFS045516 B.thuringiensis AFS045516 Plant, Corn core (2014) USA, North Carolina clusterIV MOD1Bc18 B.cereus MOD1 Bc18 Plant, Sesame Seed White (2015) USA, Maryland clusterIII AFS016365 B.cereus AFS016365 Plant, Soybean core (2014) USA, Iowa clusterIV CDC684 B.anthracis CDC684 (NRRL3495, NRS234) [originally labeled B.megaterium; shows significant attenuation of virulence; pXO1+/pXO2+] clusterIII DE0363 B.nitratireducens DE0363 clusterVI K2129 B.anthracis K2129 (1997) China, Changping clusterIII AFS028292 B.cereus AFS028292 Plant, Corn core (2014) USA, North Carolina clusterIV GOE3#1 B.thuringiensis GOE3#1 Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014) Germany, Goettingen clusterIV MOD1Bc194 B.cereus MOD1 Bc194 Human, Baby Wipes (2016) USA, Maryland clusterIII SB4 B.mycoides SB4 Food (2016) Netherlands unclustered AFS058833 B.cereus AFS058833 Plant, Corn core (2014) USA, North Carolina clusterIV AFS012491 B.cereus AFS012491 Plant, Core Other Plant (2014) USA, North Carolina unclustered TN10 B.cereus TN10 Other, Environment (2016) Bangladesh, Dhaka clusterIV AFS081127 B.toyonensis AFS081127 Plant, Soybean core (2014) USA, Iowa clusterV L-7601 B.thuringiensis L-7601 (2015) China, Tianjin clusterIV FSLM8-0091 B.cereus FSL M8-0091 Dairy products, raw milk (2012) USA clusterII AFS082261 B.cereus AFS082261 Plant, Corn core (2014) USA, North Carolina clusterIV AFS064159 B.wiedmannii AFS064159 Plant, Weed leaf (2014) USA, Ohio clusterII AFS059886 B.cereus AFS059886 Plant, Corn core (2014) USA, Illinois unclustered AFS025735 B.wiedmannii AFS025735 Soil (2014) USA, New York clusterII MOD1Bc212 B.cereus MOD1 Bc212 Human, Baby Wipes (2016) USA, Maryland clusterIII AFS001911 B.wiedmannii AFS001911 Plant, core (2014) USA, North Carolina clusterII AFS073305 B.cereus AFS073305 Plant, Corn core (2014) USA, North Carolina clusterIV 29 B.cereus 29 Animal, crab (Callinectes sp.) gastrointestinal tract (2016) Brazil, Ceara, Pacoti River, Fortaleza clusterIV AFS034818 B.thuringiensis AFS034818 Plant, core (2014) USA, North Carolina clusterIV GOE12 B.weihenstephanensis GOE12 Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014) Germany, Goettingen clusterVI AFS070925 B.pseudomycoides AFS070925 Plant, Corn core (2014) USA, Illinois clusterI BGSC4E3 B.thuringiensis sotto BGSC4E3 Animal, Insect, silkworm (Bombyx mori) (2013) UK clusterIV AFS084149 B.toyonensis AFS084149 Plant, Soybean core (2014) USA, Iowa clusterV G1-1 B.cereus G1-1 clusterIV DE0143 B.cereus DE0143 unclustered BGSC4U1#2 B.thuringiensis kyushuensis BGSC4U1#2 (HD541, 74-F-6-18, DSM6079, T11a001) Animal, Insect, silkworm (Bombyx mori) (1979) [two complete genomes sequenced for this strain with different MLST sequences and origins; strain sequenced by Biology and Biochemistry, University of Bath, England, UK; sequences conflicting with isolate BGSC4U1#1] Japan clusterV 81/1 B.anthracis 81/1 Human, blood (1979) Russia clusterIII LCT-BC235 B.cereus LCT-BC235 Other, culture sent to space aboard the Shenzhou-8 spacecraft; isolated after space flight clusterIII FSLW8-0003 B.cereus FSL W8-0003 Dairy products, Ricotta/mozzarella whey (2012) USA, New York clusterIII Strain32 B.anthracis Strain 32 Human (1974) UK clusterIII DE0191 B.cereus DE0191 clusterII AFS006579 B.toyonensis AFS006579 Soil (2014) USA, New York clusterV AFS052350 B.toyonensis AFS052350 Soil (2014) USA, New York clusterV AFS010831 B.cereus AFS010831 Soil (2014) USA, North Carolina clusterIV GOE4#1 B.thuringiensis GOE4#1 Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014) Germany, Goettingen clusterIV MB.18 B.cereus MB.18 Food (2014) Germany, Munich clusterIII AFS025653 B.cereus AFS025653 Plant, Corn core (2014) USA, North Carolina clusterIV AFS007599 B.cereus AFS007599 Soil (2014) USA, New York unclustered 14RA5914 B.anthracis 14RA5914 Animal, cattle (bovine) (Bos primigenius taurus) spleen (2014) Germany, Dobichau clusterIII 2000032892 B.anthracis 2000032892 clusterIII AFS089729 B.toyonensis AFS089729 Soil (2014) USA, North Carolina clusterV AFS015017 B.toyonensis AFS015017 Plant, Corn core (2014) USA, Illinois clusterV SN4-3 B.cereus SN4-3 Animal, dead insect from maize field (2018) Vietnam clusterIV AFS079268 B.wiedmannii AFS079268 Plant, Soybean core (2014) USA, Iowa clusterII SJ-S5 B.cereus SJ-S5 Human USA, Tennessee, Memphis clusterIV FSLW8-0640 B.cereus FSL W8-0640 Dairy products, Skim milk CLT (2012) USA, New York clusterIV AFS084862 B.thuringiensis AFS084862 Plant, Corn core (2014) USA, Illinois clusterIV FSLP2-0558 B.wiedmannii FSL P2-0558 Dairy food in process (2009) USA, New York clusterII MOD1Bc222 B.cereus MOD1 Bc222 Food, food product (2016) USA, Maryland clusterIII Rock1-15 B.cereus Rock1-15 Soil USA, Maryland, Rockville clusterIV ISSFR-9F B.cereus ISSFR-9F Other, Air (2011) clusterIII Bt407 B.thuringiensis 407 (Bt407, AH1031) [Pasteur Institute; well studied isolate that has been cured of the plasmid that encodes the insecticidal crystal toxin; three complete genomes sequenced for this strain with identical MLST sequences] France, Paris clusterIV AFS099306 B.cereus AFS099306 Plant, core (2014) USA, North Carolina clusterIV FORC024 B.cereus FORC 024 Food, chicken soup South Korea, Incheon clusterIV NCTC6474 B.cereus NCTC6474 clusterIV BGSC4AZ1 B.thuringiensis nigeriensis BGSC4AZ1 (82-8001, T08B001) (1984) Czechoslovakia clusterIV AFS029396 B.wiedmannii AFS029396 Plant, Corn core (2014) USA, Illinois clusterII ZBG4 B.thuringiensis ZBG4 Soil (2014) France, Zellenberg clusterV BPN401 B.mycoides BPN401 Soil (2013) Poland, Bialowieza National Park clusterVI AFS024404 B.cereus AFS024404 Soil (2014) USA, New York clusterII AFS017891 B.mycoides AFS017891 Soil (2014) USA, New York clusterVI INRASAp B.cereus INRA SA- (INRA SAp) clusterII AFS031210 B.thuringiensis AFS031210 Plant, core (2014) USA, North Carolina clusterIV NVH0861/00 B.cereus NVH0861-00 (NVH0861/00) (2000) [diarrheal food poisoning outbreak] Norway clusterII AFS045425 B.toyonensis AFS045425 Plant, Soybean leaf (2014) USA, Missouri clusterV AFS081271 B.anthracis AFS081271 Plant, Soybean leaf (2014) USA, Minnesota unclustered AFS000445 B.toyonensis AFS000445 Plant, Weed plant (2014) USA, Indiana clusterV AFS009840 B.cereus AFS009840 Plant, core (2014) USA, North Carolina clusterIV AFS079194 B.cereus AFS079194 Plant, core (2014) USA, North Carolina clusterVI AFS020608 B.thuringiensis AFS020608 Plant, Corn root (2014) USA, Iowa clusterIV AFS030055 B.cereus AFS030055 Plant, tree leaf (2014) USA, North Carolina unclustered OM02-3AC B.cereus OM02-3AC Human, faeces/stools (2013) China, Shenzhen clusterIII MOD1Bc219 B.cereus MOD1 Bc219 Human, Baby Wipes (2016) USA, Maryland clusterIV BGSC4AT1 B.thuringiensis japonensis BGSC4AT1 (1986) Japan clusterIV AFS061448 B.cereus AFS061448 Soil (2013) USA, North Carolina clusterIV HBF-18 B.thuringiensis HBF-18 Soil (2003) China, Hebei, Baoding clusterIV ATCC53522 B.cereus ATCC53522 (AH1085, UW85, DSM6791) Plant, roots of field-grown alfalfa/Lucerne grass (Medicago sativa) (1985) USA, Wisconsin, Arlington clusterIV BR145 B.thuringiensis BR145 Soil, soybean field (2010) Brazil, Parana, Bela Vista do Paraiso unclustered BAG4X2-1 B.c_group BAG4X2-1 Soil USA, Massachusetts, Boston clusterV BAG2X1-3 B.c_group BAG2X1-3 Soil USA, Massachusetts, Boston unclustered AFS064582 B.toyonensis AFS064582 Plant, Soybean leaf (2014) USA, Minnesota clusterV FSLW8-0767 B.cereus FSL W8-0767 Other, Sifter powder (2012) USA, New York clusterIV AFS083043 B.cereus AFS083043 Plant, tree leaf (2014) USA, North Carolina unclustered AFS048756 B.cereus AFS048756 Plant, Soybean core (2014) USA, Iowa unclustered B5-2 B.c_group B5-2 Soil China clusterII BGSC4AA1 B.thuringiensis morrisoni BGSC4AA1 Soil (1987) [originally classified as B.thuringiensis tenebrionis; two complete genomes sequenced for this strain with identical MLST sequences] UK clusterIV AFS032444 B.cereus AFS032444 Plant, Corn core (2014) USA, North Carolina clusterIV AFS055514 B.toyonensis AFS055514 Plant, Weed plant (2014) USA, Indiana clusterV AFS009340 B.wiedmannii AFS009340 Plant, Soybean core (2014) USA, Iowa clusterII BGSC4J2 B.thuringiensis aizawai BGSC4J2 Animal, Insect, Indian meal moth (Plodia interpunctella) UK, England clusterIV AFS029508 B.thuringiensis AFS029508 Plant, Soybean leaf (2014) USA, Minnesota clusterIV AFS011531 B.cereus AFS011531 Plant, Corn plant (2014) USA, North Carolina clusterIV F4430/73 B.cereus B-4ac (F4430/73, DSM4384, B4ac) Other, pea soup or faeces/stools (1973) [diarrheal food poisoning outbreak] Belgium clusterIV XL6 B.thuringiensis XL6 Soil (2006) China, Inner Mongolia clusterIII T26 B.thuringiensis T26 Soil (2005) India, Tamil Nadu clusterIV AFS085011 B.thuringiensis AFS085011 Plant, core (2014) USA, North Carolina clusterIV AFS019346 B.toyonensis AFS019346 Plant, Soybean leaf (2014) USA, Iowa clusterV AFS060154 B.cereus AFS060154 Plant, Soybean leaf (2014) USA, Iowa unclustered AFS032151 B.cereus AFS032151 Plant, Soybean core (2014) USA, Iowa clusterIV GM6LP B.mycoides GM6LP Plant, English ray-grass (Lolium perenne) Germany clusterVI AFS022238 B.cereus AFS022238 Food, Mushroom (2013) USA, Iowa clusterVI AFS002102 B.cereus AFS002102 Plant, Soybean leaf (2013) USA, Minnesota clusterIV DAR81934#1 B.thuringiensis DAR81934 (DAR81934#1) [exhibits molluscicidal activity toward the pest snail Cernuella virgata; two complete genomes sequenced for this strain with different MLST sequences; strain sequenced by School of Agricultural and Wine Sciences, Charles Sturt University, Wagga Wagga, New South Wales, Australia; sequences conflicting with isolate DAR81934#2] Australia, Port Campbell National Park clusterIV HM-311 B.thuringiensis HM-311 Soil (2018) China, Xinjiang Uyghur Autonomous Region clusterIV AFS070352 B.toyonensis AFS070352 Plant, Soybean leaf (2014) USA, Iowa clusterV BGSC4M3#1 B.thuringiensis darmstadiensis HD146 (T10003, AH451, DSM6091, 10/103, BGSC4M1 or BGSC4M3, BGSC4M3#1) (1968) [two complete genomes sequenced for this strain with different MLST sequences and origins; strain sequenced by State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, Hubei, China; sequences conflicting with isolate BGSC4M3#2] UK, England clusterIV PCr B.anthracis PCr Other, bone powder (1978) [imported bone powder from Thailand, which was fed to cattle diagnosed with anthrax in Shizuoka Prefecture, Japan; penicillin-resistant] clusterIII FSLK6-0040 B.cereus FSL K6-0040 Dairy products, Laboratory Heat Treated Raw Milk (2012) USA, New York clusterIV AFS097377 B.cereus AFS097377 Plant, Corn core (2014) USA, North Carolina clusterIV AFS040286 B.thuringiensis AFS040286 Plant, Corn seed (2014) USA, Iowa clusterIV I141 B.cereus I141 Plant, Grass (2017) Israel, Karie Deshe clusterIV MOD1Bc200 B.cereus MOD1 Bc200 Human, Baby Wipes (2016) USA, Maryland clusterIII DE0502 B.thuringiensis DE0502 unclustered UBA5641 B.cereus UBA5641 clusterIII 9080-G B.anthracis 9080-G Soil (1998) [pXO1+/pXO2+] Georgia, Gardabani clusterIII HuB1-1 B.c_group HuB1-1 Soil Belgium clusterIV AFS075781 B.cereus AFS075781 Plant, Soybean core (2014) USA, Iowa clusterIV AFS014939 B.toyonensis AFS014939 Plant, Grass core (2014) USA, Iowa clusterV T30001 B.thuringiensis medellin T30001 clusterIV B7-s B.cereus B7-s clusterIV NRRLB-18679 B.thuringiensis sotto NRRLB-18679 Animal, Insect, Coleoptera (2013) UK clusterII AFS011216 B.wiedmannii AFS011216 Plant, Corn grain bin dust (2014) USA, Iowa clusterII AH676#2 B.c_group AH676 (AH676#2) Soil, heather soil (1994) [strain sequenced by Biological Defense Research Directorate (BDRD), Rockville, Maryland, USA; sequences conflicting with isolate AH676#1] Norway, Tromsoe clusterIV AFS022121 B.toyonensis AFS022121 Plant, Soybean core (2014) USA, Iowa clusterV RIVMBC964 B.cereus RIVMBC964 Food, kebab (2002) Netherlands unclustered I175 B.cereus I175 Plant, Grass (2017) Israel, Karie Deshe clusterIV AFS005614 B.cereus AFS005614 Plant, Corn core (2014) USA, Illinois clusterII AFS084744 B.cereus AFS084744 Soil (2014) USA, New York clusterIV M13 B.cereus M13 Food, Korean fermented food (2016) South Korea clusterIV AFS097554 B.toyonensis AFS097554 Plant, Corn core (2014) USA, Illinois clusterV AFS028516 B.cereus AFS028516 Plant, Corn leaf (2014) USA, Illinois clusterIV AFS080536 B.cereus AFS080536 Plant, Corn core (2014) USA, North Carolina clusterIV AFS030961 B.thuringiensis AFS030961 Plant, Soybean core (2014) USA, Iowa clusterIV MB.8 B.cereus MB.8 Food (2014) Germany, Munich clusterIII FSLH8-0492 B.weihenstephanensis FSL H8-0492 Dairy products, raw milk (2006) USA clusterVI AFS099102 B.cereus AFS099102 Plant, Weed leaf (2014) USA, Indiana clusterIV K2883 B.anthracis K2883 Human (1997) India clusterIII VD133 B.c_group VD133 Soil Martinique clusterIV AFS064516 B.cereus AFS064516 Plant, Corn core (2014) USA, Illinois clusterIV AFS041581 B.cereus AFS041581 Plant, Soybean root (2014) USA, Missouri clusterIV AFS043402 B.thuringiensis AFS043402 Plant, Corn core (2014) USA, Illinois clusterIV AFS056615 B.thuringiensis AFS056615 Plant, Soybean leaf (2014) USA, Missouri clusterIV I109 B.cereus I109 Plant, Grass (2017) Israel, Ramat HaNadiv clusterIV MOD1Bc199 B.cereus MOD1 Bc199 Human, Baby Wipes (2016) USA, Maryland clusterIII AFS000414 B.wiedmannii AFS000414 Plant, Corn core (2014) USA, Illinois clusterII BGSC4BK1 B.thuringiensis balearica BGSC4BK1 Soil Spain clusterII AFS067315 B.cereus AFS067315 Plant, Corn core (2014) USA, North Carolina clusterIV AFS014136 B.cereus AFS014136 Plant, Corn core (2014) USA, North Carolina clusterIV AFS061705 B.toyonensis AFS061705 Soil (2014) USA, New York clusterV VD166 B.c_group VD166 Soil UAE, Dubai clusterIV MOD1Bc69 B.cereus MOD1 Bc69 Food, Paprika (2015) USA, Maryland clusterIII AFS096303 B.toyonensis AFS096303 Plant, Soybean leaf (2014) USA, Minnesota clusterV AFS034546 B.thuringiensis AFS034546 Plant, Soybean root (2014) USA, Minnesota clusterIV AFS040159 B.pseudomycoides AFS040159 Plant, Soybean root (2014) USA, Missouri clusterI A.Br.003 B.anthracis Scotland A.Br.003 Human, child cutaneous anthrax UK, Scotland, Dundee clusterIII MOD1Bc107 B.cereus MOD1 Bc107 Other, Oxytetracycline Medicated Fish Feed (2006) USA, Maryland clusterIII AFS049840 B.cereus AFS049840 Plant, Wheat plant (2014) USA, North Carolina clusterIV WSBC10311 B.c_group WSBC10311 (KB011) [B.cereus or B.weihenstephanensis] Germany, Weihenstephan clusterII CH3 B.cytotoxicus CH 3 Food, Mashed potatoes (2015) Switzerland clusterVII AFS060054 B.thuringiensis AFS060054 Plant, core (2014) USA, North Carolina clusterIV AFS046388 B.cereus AFS046388 Plant, Soybean core (2014) USA, Iowa unclustered AFS067103 B.cereus AFS067103 Plant, Corn core (2014) USA, North Carolina clusterIII AFS032644 B.pseudomycoides AFS032644 Plant, Corn (2014) USA, Iowa clusterI AFS070615 B.toyonensis AFS070615 Plant, Weed leaf (2014) USA, Indiana clusterV AFS023898 B.cereus AFS023898 Plant, Corn core (2014) USA, Illinois clusterIV AFS079942 B.cereus AFS079942 Plant, Corn root (2014) USA, Iowa clusterIV AFS072260 B.cereus AFS072260 Soil (2014) USA, New York clusterVI VD021 B.c_group VD021 Other, Water from a small pond site Belgium clusterVI Kafkas-215 B.anthracis Kafkas-215 Soil (2014) Turkey, Selim clusterIII AFS047635 B.thuringiensis AFS047635 Plant, Soybean leaf (2014) USA, Minnesota clusterIV AFS042006 B.cereus AFS042006 Plant, Corn core (2014) USA, North Carolina unclustered AFS075030 B.cereus AFS075030 Plant, Soybean core (2014) USA, Iowa clusterIV Schrouff B.c_group Schrouff Food clusterIV AFS096719 B.thuringiensis AFS096719 Plant, Corn core (2014) USA, North Carolina clusterIV B4083 B.cereus B4083 Food (2013) Netherlands clusterVI AFS055990 B.toyonensis AFS055990 Plant, Corn core (2014) USA, Illinois clusterV AFS014747 B.wiedmannii AFS014747 Plant, Corn core (2014) USA, Illinois clusterII AFS071099 B.wiedmannii AFS071099 Plant, Soybean leaf (2014) USA, Minnesota clusterII 2000032832 B.anthracis 2000032832 clusterIII AFS038776 B.wiedmannii AFS038776 Animal, earthworm (2013) USA, Minnesota clusterII AFS077577 B.pseudomycoides AFS077577 Soil (2014) USA, New York unclustered AFS072084 B.anthracis AFS072084 Plant, Corn (2014) USA, North Carolina clusterIII AFS061925 B.toyonensis AFS061925 Plant, Corn root (2014) USA, Iowa clusterV AFS054163 B.cereus AFS054163 Plant, core (2014) USA, North Carolina unclustered AFS093377 B.toyonensis AFS093377 Plant, Soybean root (2014) USA, Minnesota clusterV AFS012870 B.anthracis AFS012870 Plant, core (2014) USA, North Carolina clusterIII 1126_1 B.thuringiensis 1126_1 Soil (2017) China, Hebei Province clusterIV AFS065666 B.thuringiensis AFS065666 Soil (2014) USA, New York clusterIV AFS021040 B.cereus AFS021040 Plant, core (2014) USA, North Carolina clusterIII AFS055854 B.thuringiensis AFS055854 Plant, core (2014) USA, North Carolina clusterIV tsu1 B.cereus tsu1 Other, contaminated cellulose-agar plate (2009) USA, Tennessee, Nashville clusterIV AFS045348 B.cereus AFS045348 Plant, core (2014) USA, North Carolina unclustered AFS070970 B.wiedmannii AFS070970 Plant, tree leaf (2014) USA, North Carolina clusterII BGSC4T1 B.thuringiensis wuhanensis HD525 (BGSC4T1) Soil (1976) China clusterIV AFS003807 B.cereus AFS003807 Plant, Corn core (2014) USA, North Carolina clusterIV PR09-1 B.anthracis PR09-1 USA clusterIII AFS093598 B.cereus AFS093598 Plant, tree leaf (2014) USA, North Carolina clusterIII AFS023641 B.thuringiensis AFS023641 Plant, core (2014) USA, North Carolina clusterIV MOD1Bc110 B.cereus MOD1 Bc110 Other, Oxytetracycline Medicated Fish Feed (2007) USA, Maryland clusterIII MC67 B.weihenstephanensis MC67 Soil, mud [emetic toxin/cereulide producer] Denmark clusterVI MB.22 B.cereus MB.22 Food (2014) Germany, Munich clusterIII NC7401 B.cereus NC7401 Human, faeces/stools or vomit (1974 or 1994) [human vomiting, emetic food poisoning outbreak, emetic toxin/cereulide producer] Japan clusterIII AFS069354 B.toyonensis AFS069354 Plant, Soybean core (2014) USA, Iowa clusterV AFS065496 B.cereus AFS065496 Plant, Corn core (2014) USA, North Carolina clusterIV VD148 B.c_group VD148 Soil UK, Scotland clusterV AFS048537 B.pseudomycoides AFS048537 Plant, Soybean core (2014) USA, Iowa clusterI I75 B.cereus I75 Plant, Grass (2017) Israel, Ramat HaNadiv unclustered AFS055530 B.toyonensis AFS055530 Plant, Corn core (2014) USA, Illinois clusterV AFS074325 B.toyonensis AFS074325 Plant, Corn core (2014) USA, Illinois clusterV AFS013396 B.pseudomycoides AFS013396 Plant, Corn core (2014) USA, Illinois clusterI DB27 B.thuringiensis DB27 [highly nematicidal] clusterIV AFS015939 B.cereus AFS015939 Plant, Corn core (2014) USA, North Carolina clusterIV MCCC1A02161 B.anthracis MCCC1A02161 (N1ZF-2) Other, sediment (2002) [two complete genomes sequenced for this strain with identical MLST sequences] China, South China Sea clusterIII AFS094802 B.toyonensis AFS094802 Plant, Soybean core (2014) USA, Iowa clusterV AFS089278 B.toyonensis AFS089278 Plant, core (2014) USA, North Carolina clusterV AFS080756 B.cereus AFS080756 Plant, Soybean core (2014) USA, Iowa clusterIV AFS040987 B.thuringiensis AFS040987 Plant, Soybean root (2014) USA, Minnesota clusterIV B4085 B.cereus B4085 Food (2013) Netherlands clusterIII AFS066483 B.thuringiensis AFS066483 Plant, Corn leaf (2014) USA, Illinois clusterIV AFS002707 B.wiedmannii AFS002707 Plant, Soybean leaf (2014) USA, Illinois clusterII AFS001977 B.cereus AFS001977 Plant, Corn core (2014) USA, North Carolina clusterIV AFS033400 B.cereus AFS033400 Plant, Corn core (2014) USA, North Carolina clusterIV WestNA B.anthracis Western North America USA6153 (A0071) Animal, Bison [pXO1+/pXO2+] Canada clusterIII FSLH7-687 B.weihenstephanensis FSL H7-687 Dairy products, pasteurized milk (2005) USA clusterVI 2000032819 B.anthracis 2000032819 clusterIII AFS024499 B.toyonensis AFS024499 Plant, Wheat plant (2014) USA, North Carolina clusterV MOD1Bc235 B.cereus MOD1 Bc235 Food, food product (2016) USA, Maryland unclustered AFS013151 B.wiedmannii AFS013151 Plant, Corn root (2014) USA, Iowa clusterII MOD1Bc149 B.cereus MOD1 Bc149 Food, Hybrid Tilapia (2006) USA, Maryland clusterIV AFS034600 B.thuringiensis AFS034600 Plant, core (2014) USA, North Carolina clusterIV 16-00176 B.cereus 16-00176 clusterIII DPC6431 B.thuringiensis DPC6431 Human, faeces/stools (2008) Ireland clusterIII Et10/1 B.thuringiensis Et10/1 Other, Water (2011) [altitude 3997 m.] Chile, Lirima thermal springs clusterIII AFS096226 B.cereus AFS096226 Plant, Soybean leaf (2013) USA, Minnesota clusterIV AmesAnc B.anthracis Ames Ancestor (A0581, A2084) Animal, cattle (Cow) (1981) [this strain is the progenitor of all the Ames strains used as research tools in laboratories around the world; pXO1+/pXO2+] USA, Texas, Sarita clusterIII AFS039283 B.cereus AFS039283 Soil (2014) USA, New York clusterVI LK9 B.cereus LK9 (2010) Malaysia, Malacca clusterIV AFS073128 B.toyonensis AFS073128 Plant, Corn grain bin dust (2013) USA, Iowa clusterV AFS085114 B.cereus AFS085114 Plant, Core Other Plant (2014) USA, North Carolina unclustered MHI226 B.cereus MHI 226 Dairy products, milk and milk products Germany clusterII AFS065610 B.wiedmannii AFS065610 Soil (2014) USA, New York clusterII AFS058668 B.pseudomycoides AFS058668 Soil (2014) USA, North Carolina clusterI SDAKA96 B.cereus SDA KA 96 Dairy products, raw milk (1997) Sweden clusterIII BGSC4BR1 B.thuringiensis poloniensis BGSC4BR1 (Pbt23) Animal, Insect, Black Arches/Nun Moth (Lymantria monacha) larvae Denmark clusterIV AFS004748 B.cereus AFS004748 Plant, Soybean core (2014) USA, Iowa clusterIV AFS081470 B.thuringiensis AFS081470 Plant, Weed plant (2014) USA, North Carolina clusterIV Rock3-28 B.cereus Rock3-28 Soil USA, Maryland, Rockville clusterV BcFL2013 B.cereus BcFL2013 clusterIII IS845/00 B.c_group IS845/00 Animal, Mammals Poland clusterIII 78-2 B.thuringiensis 78-2 Soil (2003) China, Hebei, Baoding clusterIV PR01 B.anthracis PR01 USA clusterIII BAG3X2-1 B.c_group BAG3X2-1 Soil USA, Massachusetts, Boston clusterVI A16R B.anthracis A16R [attenuated variant of strain A16; pXO1+/pXO2-] clusterIII BGSC4U1#1 B.thuringiensis kyushuensis BGSC4U1#1 (HD541, 74-F-6-18, DSM6079, T11a001) Animal, Insect, silkworm (Bombyx mori) (1979) [two complete genomes sequenced for this strain with different MLST sequences and origins; strain sequenced by State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, Hubei, China; sequences conflicting with isolate BGSC4U1#2] Japan clusterIV AFS032951 B.toyonensis AFS032951 Soil (2014) USA, Iowa clusterV AFS002094 B.cereus AFS002094 Plant, Corn plant (2014) USA, North Carolina clusterIV AFS099758 B.cereus AFS099758 Plant, Corn (2014) USA, North Carolina clusterIII AFS000524 B.cereus AFS000524 Plant, Weed core (2014) USA, North Carolina clusterIV AFS056670 B.thuringiensis AFS056670 Plant, Corn grain bin dust (2013) USA, Iowa clusterIV HD867 B.thuringiensis kumamotoensis 3-71 (BGSC4W1, T18001, AH459, HD867) Animal, Insect, litter of silkworm (Bombyx mori) [two complete genomes sequenced for this strain with identical MLST sequences] Japan clusterIV AFS009835 B.thuringiensis AFS009835 Soil (2014) USA, New York clusterIV TH26 B.mycoides TH26 Soil core (2017) [from a boreal forest soil associated with permafrost thaw] USA, Alaska, Fairbanks clusterVI VDM022 B.c_group VDM022 Soil Greenland clusterVI AFS087909 B.pseudomycoides AFS087909 (2014) USA, Iowa unclustered AFS062925 B.pseudomycoides AFS062925 Plant, Soybean core (2014) USA, Iowa clusterI AFS022412 B.cereus AFS022412 Plant, core (2014) USA, North Carolina clusterII AFS004741 B.pseudomycoides AFS004741 Soil (2014) USA, Iowa unclustered AFS036086 B.cereus AFS036086 Plant, Weed core (2014) USA, North Carolina clusterII AFS094329 B.thuringiensis AFS094329 Plant, core (2014) USA, North Carolina clusterIV AFS024711 B.wiedmannii AFS024711 Plant, Corn core (2014) USA, Illinois clusterII PJC48 B.cereus PJC48 Other, activated sludge (2016) China, Shihezi clusterII PFYN01#1 B.albus PFYN01#1 Other, Silt in the tailings reservoir area (2016) China, Panzhihua clusterII AFS089520 B.wiedmannii AFS089520 Plant, Corn core (2014) USA, Illinois clusterII AFS093149 B.anthracis AFS093149 Plant, Weed core (2014) USA, North Carolina clusterIII AFS036336 B.thuringiensis AFS036336 Plant, core (2014) USA, North Carolina clusterIV VD115 B.c_group VD115 Soil Guadeloupe clusterV 3631_1C B.anthracis 3631_1C Animal, greater kudu (Tragelaphus strepsiceros) (2009) [from a sporadic anthrax outbreak; pXO1+/pXO2-] South Africa, Northern Cape Province, Klipfontein clusterIII AFS047869 B.pseudomycoides AFS047869 Soil (2014) USA, Iowa clusterI AFS002920 B.thuringiensis AFS002920 Plant, Soybean seed (2014) USA, Iowa clusterIV BGSC4I4 B.thuringiensis entomocidus/subtoxicus BGSC4I4 (HD9) Animal, Insect, stored nut moth (Paralipsa gularis) (1958) [two complete genomes sequenced for this strain with identical MLST sequences] Canada clusterIV 97-27 B.thuringiensis konkukian 97-27 (97/027, CEB97/27, CEB97/027, AH1248) Human, tissue necrosis (1995) [two complete genomes sequenced for this strain with identical MLST sequences] Yugoslavia, Bosnia-Herzegovina, Sarajevo clusterIII FORC013 B.cereus FORC 013 Food, fried eel (2013) South Korea clusterIV AFS017202 B.cereus AFS017202 Plant, Corn root (2014) USA, Iowa clusterVI MOD1Bc105 B.cereus MOD1 Bc105 Other, Oxytetracycline Medicated Fish Feed (2006) USA, Maryland clusterIII AFS047607 B.thuringiensis AFS047607 Plant, Soybean leaf (2014) USA, Minnesota clusterIV Q1 B.cereus Q1 Other, deep-subsurface oil reservoir China (Northeastern), Daqing oil field clusterIII AFS010752 B.toyonensis AFS010752 Plant, core (2014) USA, North Carolina clusterV DE0338 B.toyonensis DE0338 clusterV S2E19 B.mycoides S2E19 Soil (2016) Netherlands clusterVI T13001 B.thuringiensis pakistani T13001 (Pak94) Animal, Insect, Lepidoptera (1976) Pakistan clusterIV 781 B.anthracis BA781 clusterIII HD789 B.thuringiensis HD789 clusterIV AFS072350 B.cereus AFS072350 Plant, Soybean leaf (2013) USA, Minnesota clusterIV BGSC4N1 B.thuringiensis toumanoffi HD201 (BGSC4N1, AH452, B-30-2) Animal, Insect, Greater Wax Moth/Honeycomb Moth (Galleria mellonella) UK, England clusterIV BGSC4AE1 B.thuringiensis amagiensis T29001 (BGSC4AE1, 84F, 58.20) Animal, Insect, litter of silkworm (Bombyx mori) Japan clusterIV AFS064122 B.pseudomycoides AFS064122 Other, excrement (2014) USA, Iowa unclustered AFS007396 B.cereus AFS007396 Soil (2014) USA, North Carolina clusterVI BAG5X2-1 B.c_group BAG5X2-1 Soil USA, Massachusetts, Boston clusterII AFS031495 B.toyonensis AFS031495 Plant, Soybean leaf (2014) USA, Minnesota clusterV AFS035137 B.pseudomycoides AFS035137 Plant, Corn root (2014) USA, Iowa unclustered AFS090198 B.pseudomycoides AFS090198 Plant, Corn leaf (2014) USA, Iowa unclustered AFS057383 B.anthracis AFS057383 Plant, core (2014) USA, North Carolina unclustered VU-DES13 B.toyonensis VU-DES13 Animal, Springtail/Collembola (Folsomia candida) midgut Netherlands, Amsterdam clusterV MOD1Bc216 B.cereus MOD1 Bc216 Human, Baby Wipes (2016) USA, Maryland clusterIII BF1 B.anthracis BF1 Animal, cattle (cow) carcass (2009) [from a cow that had succumbed to anthrax; pXO1+/pXO2+] Germany, Bavaria clusterIII AFS030475 B.cereus AFS030475 (2014) USA, Iowa unclustered AFS009013 B.pseudomycoides AFS009013 Plant, Corn leaf (2014) USA, Illinois clusterI AFS009443 B.cereus AFS009443 Plant, Corn core (2014) USA, Illinois clusterIV BGSC4K1 B.thuringiensis morrisoni BGSC4K1 Animal, Insect, silkworm (Bombyx mori) (2013) UK clusterIV AFS041167 B.pseudomycoides AFS041167 Soil (2014) USA, North Carolina unclustered 823BTHU B.cereus 823 BTHU Human USA, Washington clusterIV AFS060060 B.thuringiensis AFS060060 Plant, Soybean core (2014) USA, Iowa clusterIV AFS006079 B.toyonensis AFS006079 Plant, Soybean root (2014) USA, Minnesota clusterV DE0326 B.thuringiensis DE0326 clusterII AFS058004 B.thuringiensis AFS058004 Plant, Corn grain bin dust (2013) USA, Iowa clusterIV T0137 B.thuringiensis T0137 Soil (2015) Brazil, Tocantins State clusterIV INRASLp B.weihenstephanensis INRA SL- (INRA SLp) clusterVI AFS057725 B.cereus AFS057725 Soil (2014) USA, New York unclustered AFS063157 B.cereus AFS063157 Plant, core (2014) USA, North Carolina clusterIV FSLM7-1251 B.wiedmannii FSL M7-1251 Dairy products, raw milk (2011) USA, New York clusterII AFS049141 B.cereus AFS049141 Soil (2014) USA, New York clusterIV BP865 B.thuringiensis kurstaki BP865 Plant, phylloplane (1993) South Korea unclustered MOD1Bc75 B.cereus MOD1 Bc75 Plant, Sesame Seed (2015) USA, Maryland clusterIII AFS072183 B.cereus AFS072183 Plant, Corn core (2014) USA, Illinois unclustered I147 B.cereus I147 Plant, Grass (2017) Israel, Karie Deshe clusterIV AFS059859 B.thuringiensis AFS059859 (2014) USA, Iowa clusterIV AFS069947 B.cereus AFS069947 Plant, Corn core (2014) USA, North Carolina clusterIV AFS013362 B.cereus AFS013362 Plant, Corn (2014) USA, Iowa clusterII AFS026537 B.cereus AFS026537 Plant, Weed core (2014) USA, North Carolina unclustered AFS089449 B.toyonensis AFS089449 Plant, Soybean leaf (2014) USA, Minnesota clusterV AFS066175 B.thuringiensis AFS066175 Plant, core (2014) USA, North Carolina clusterIV AFS029838 B.wiedmannii AFS029838 Plant, Corn core (2014) USA, Illinois clusterII DE0269 B.cereus DE0269 clusterIV AFS053866 B.wiedmannii AFS053866 Plant, Corn leaf (2014) USA, Illinois clusterII AFS021634 B.thuringiensis AFS021634 Plant, Soybean core (2014) USA, Iowa clusterIV AFS046754 B.cereus AFS046754 Plant, core (2014) USA, North Carolina clusterVI AFS069564 B.cereus AFS069564 Plant, Corn root (2013) USA, Iowa clusterII AFS053253 B.thuringiensis AFS053253 Plant, Soybean leaf (2014) USA, Minnesota clusterIV AFS050757 B.wiedmannii AFS050757 Plant, Soybean root (2014) USA, Iowa clusterII AFS096463 B.thuringiensis AFS096463 Food, Mushroom (2013) USA, Iowa clusterIV MOD1Bc135 B.cereus MOD1 Bc135 Food, Dietary Supplements (2015) USA, Maryland clusterIII NVH0391/98 B.cytotoxicus type strain NVH0391-98 (KB007, CytK, DSM22905, CIP110041, NVH0391/98) Food, Vegetable puree (1998) [diarrheal food poisoning outbreak, fatal] France, Essone clusterVII DE0537 B.thuringiensis DE0537 clusterIII BGSC4D1 B.thuringiensis kurstaki BGSC4D1 (HD1, AH248, KB004) Animal, Insect, diseased larvae of Pink Bollworm (Pectinophora gossypiella) (1970) [sequences conflicting with isolates HD1#1, HD1#2, and HD1#3] USA, Texas, Brownsville unclustered BGSC4AD1 B.thuringiensis toguchini T31001 (BGSC4AD1) Soil USSR, Russia clusterIV Gmb1 B.anthracis Gmb1 Gambia clusterIII AFS074234 B.wiedmannii AFS074234 Plant, Corn core (2014) USA, Illinois clusterII AFS089424 B.wiedmannii AFS089424 Plant, Soybean core (2014) USA, Iowa clusterII MOD1Bc180 B.cereus MOD1 Bc180 Human, Baby Wipes (2016) USA, Maryland clusterIII AFS036437 B.thuringiensis AFS036437 Food, Mushroom (2013) USA, Iowa clusterIV AFS008176 B.wiedmannii AFS008176 Plant, Corn root (2013) USA, Minnesota clusterII C3-5-14 B.cereus C3-5-14 Animal, camel faeces/stools (2015) United Arab Emirates clusterIII AFS039717 B.cereus AFS039717 Plant, core (2014) USA, North Carolina clusterII 16-00183 B.cereus 16-00183 clusterIII AFS006334 B.cereus AFS006334 Plant, core (2014) USA, North Carolina clusterIV AFS077622 B.toyonensis AFS077622 Plant, Soybean core (2014) USA, Iowa clusterV S612 B.cereus S612 Other, groundwater (2015) USA clusterII 2000031765 B.anthracis 2000031765 clusterIII 2000031027 B.anthracis 2000031027 Animal, cattle (1957) USA, Oklahoma clusterIII UAEU-H3K6M1 B.cereus UAEU-H3K6M1 clusterIII DE0184 B.pseudomycoides DE0184 clusterI AFS095077 B.pseudomycoides AFS095077 Soil (2014) USA, Iowa unclustered AFS009644 B.thuringiensis AFS009644 Plant, tree leaf (2014) USA, North Carolina clusterIV AFS098022 B.cereus AFS098022 Plant, Corn grain bin dust (2013) USA, Iowa clusterIV MSX-A12 B.c_group MSX-A12 clusterIII c-21 B.thuringiensis c-21 Animal, ob/ob mouse animal manure (2016) China, Beijing clusterIV AFS068806 B.cereus AFS068806 Plant, Corn core (2014) USA, North Carolina clusterIV AFS007743 B.cereus AFS007743 Plant, Corn core (2014) USA, North Carolina clusterIV MGYG-HGUT-02288 B.cereus MGYG-HGUT-02288 unclustered SN1 B.tropicus SN1 Animal, Insect, European Corn Borer (Ostrinia nubilalis) (2018) Vietnam clusterIII AFS053272 B.cereus AFS053272 Soil (2014) USA, North Carolina clusterVI AFS025179 B.toyonensis AFS025179 Plant, Corn core (2014) USA, Illinois clusterV MOD1Bc192 B.cereus MOD1 Bc192 Human, Baby Wipes (2016) USA, Maryland clusterIII FSLW8-0483 B.cereus FSL W8-0483 Other, Raw liquid milk silo (2012) USA, New York clusterIII CVUAS2833 B.cytotoxicus CVUAS2833 Food, potato puree (2007) [related to food poisoning] Germany clusterVII AFS009283 B.cereus AFS009283 Plant, Corn core (2014) USA, North Carolina clusterIV AFS064975 B.cereus AFS064975 (2014) USA, Iowa clusterIV 2000031006 B.anthracis 2000031006 (1956) USA, New Mexico clusterIII AFS062254 B.pseudomycoides AFS062254 Plant, Corn leaf (2014) USA, Illinois unclustered HuA2-3 B.c_group HuA2-3 Soil Belgium clusterV DE0088 B.paranthracis DE0088 clusterIII BGSC4Q7 B.thuringiensis israelensis BGSC4Q7 (4Q2-81, AH424, KB006) Soil (1976) [plasmid-cured; acrystalliferous; widely used as a recombination host] Israel clusterIV AFS068624 B.anthracis AFS068624 Plant, core (2014) USA, North Carolina clusterIII AFS017361 B.anthracis AFS017361 Plant, core (2014) USA, North Carolina clusterIII SJ-S26 B.cereus SJ-S26 Human USA, Tennessee, Memphis clusterIV CH2 B.cytotoxicus CH 2 Food, Mashed potatoes (2015) Switzerland clusterVII 6113 B.cereus 6113 Human, vomit (2016) China clusterIII AFS011939 B.thuringiensis AFS011939 Plant, Soybean root (2014) USA, Iowa clusterIV AFS023305 B.anthracis AFS023305 Plant, Corn core (2014) USA, North Carolina clusterIII Bti B.thuringiensis Bti Soil (2015) Brazil clusterIV AFS008930 B.wiedmannii AFS008930 Plant, Soybean leaf (2014) USA, Minnesota clusterII GOE6#2 B.weihenstephanensis GOE6#2 Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014) Germany, Goettingen clusterVI SB8 B.mycoides SB8 Soil (2016) Netherlands clusterVI AFS017221 B.toyonensis AFS017221 Plant, Soybean core (2014) USA, Iowa clusterV AFS081174 B.toyonensis AFS081174 Plant, Soybean core (2014) USA, Iowa clusterV AFS039999 B.thuringiensis AFS039999 Plant, Corn root (2014) USA, Iowa clusterIV AFS011659 B.thuringiensis AFS011659 Plant, core (2014) USA, North Carolina clusterIV AFS051626 B.cereus AFS051626 Plant, Weed leaf (2014) USA, Indiana clusterIV ATCC35646 B.thuringiensis israelensis ATCC35646 (IMSNU12089, KB005, KCTC1509, HD522, BGSC4Q12) Other, raw sewage pond (1977) Israel, Kibbutz Hulda clusterIV AFS051634 B.cereus AFS051634 Plant, Corn core (2014) USA, North Carolina clusterIV AFS056359 B.wiedmannii AFS056359 Plant, Weed plant (2014) USA, Indiana clusterII F1-15 B.cereus F1-15 clusterIII BS16 B.cereus BS16 clusterIV AFS080704 B.cereus AFS080704 Plant, core (2014) USA, North Carolina clusterII AFS068057 B.toyonensis AFS068057 Plant, Corn core (2014) USA, Illinois clusterV AFS015432 B.thuringiensis AFS015432 Soil (2014) USA, Iowa clusterIV AFS073631 B.cereus AFS073631 Plant, Soybean core (2014) USA, Iowa clusterIV AFS099737 B.cereus AFS099737 Plant, Corn core (2014) USA, North Carolina clusterIV AFS059517 B.thuringiensis AFS059517 Plant, Corn grain bin dust (2013) USA, Iowa clusterIV BGSC4BD1 B.thuringiensis huazhongensis BGSC4BD1 (T40001, YBT-978) China clusterIV NVH0674/98 B.cereus NVH0674-98 (NVH0674/98) Food, Scrambled eggs or mashed swede (1998) [diarrheal food poisoning outbreak] Norway clusterII MOD1Bc57 B.cereus MOD1 Bc57 Human, Baby Wipes (2016) USA, Maryland clusterIV AFS068756 B.cereus AFS068756 Plant, Soybean core (2014) USA, Iowa clusterIV AFS050801 B.toyonensis AFS050801 Soil (2014) USA, North Carolina clusterV A8S3 B.cereus A8S3 Other, Sediments (2003) Pacific Ocean clusterIV JM-Mgvxx-63 B.thuringiensis JM-Mgvxx-63 (BrMgv02-JM63) Other, oil-contaminated mangrove sediment (2013) Brazil, Sao Paulo, Bertioga unclustered AFS004252 B.toyonensis AFS004252 Plant, Soybean leaf (2014) USA, Minnesota clusterV HYU01 B.anthracis HYU01 Soil (2009) [pXO1+/pXO2+] South Korea, Changnyeong clusterIII AFS022438 B.cereus AFS022438 Plant, Corn core (2014) USA, North Carolina clusterIV AFS068456 B.cereus AFS068456 Plant, Soybean root (2014) USA, Missouri unclustered AFS006512 B.cereus AFS006512 Plant, Corn core (2014) USA, North Carolina clusterIV AFS040661 B.thuringiensis AFS040661 Plant, Corn leaf (2014) USA, Illinois clusterIV AFS035656 B.wiedmannii AFS035656 Plant, Soybean core (2014) USA, Iowa clusterII AFS018975 B.pseudomycoides AFS018975 Soil (2014) USA, New York unclustered AFS052650 B.toyonensis AFS052650 Animal, Insect, Japanese beetle (2013) USA, Illinois clusterV AFS001538 B.cereus AFS001538 Plant, Corn core (2014) USA, North Carolina clusterIV AFS023094 B.wiedmannii AFS023094 Plant, Soybean core (2014) USA, Iowa clusterII AFS097488 B.thuringiensis AFS097488 Plant, Corn core (2014) USA, Illinois clusterIV MOD1Bc228 B.mycoides MOD1 Bc228 Food, food product (2016) USA, Maryland clusterVI AFS086130 B.toyonensis AFS086130 Plant, Corn grain bin dust (2013) USA, Iowa clusterV FSLM7-1219 B.cereus FSL M7-1219 Dairy products, raw milk (2011) USA clusterVI BGSC4AO1 B.thuringiensis sumiyoshiensis BGSC4AO1 (1989) Japan clusterIV AFS082943 B.cereus AFS082943 Plant, Corn core (2014) USA, North Carolina clusterIV A42 B.cereus A42 Plant, black pepper plant root (2018) Vietnam clusterIV AFS041242 B.cereus AFS041242 Soil (2014) USA, New York clusterII MOD1Bc139 B.cereus MOD1 Bc139 Food, Dietary Supplements (2015) USA, Maryland clusterIV MM_3 B.cereus MM_3 (BGSC6A71) Food (2003) USA clusterII AFS018617 B.thuringiensis AFS018617 Soil (2014) USA, New York clusterIV AFS029963 B.thuringiensis AFS029963 Plant, core (2014) USA, North Carolina clusterIV AFS091573 B.cereus AFS091573 Soil (2014) USA, New York clusterVI MOD1Bc229 B.cereus MOD1 Bc229 Food, food product (2016) USA, Maryland clusterIII AFS028955 B.wiedmannii AFS028955 Plant, Soybean leaf (2014) USA, Minnesota clusterII AFS095018 B.cereus AFS095018 Plant, Weed core (2014) USA, North Carolina clusterIV AFS049861 B.toyonensis AFS049861 Plant, Wheat plant (2014) USA, North Carolina clusterV AFS029692 B.wiedmannii AFS029692 Plant, core (2014) USA, North Carolina clusterII AFS050081 B.thuringiensis AFS050081 Plant, Soybean root (2014) USA, Iowa clusterIV AFS022504 B.thuringiensis AFS022504 Plant, Corn core (2014) USA, Illinois clusterIV LP1YM B.thuringiensis LP 1 YM USA, Yosemite National Park, California clusterII G12 B.cereus G12 Food, cucumber (2015) Germany, Kiel clusterIII AFS063010 B.wiedmannii AFS063010 (2014) USA, North Carolina clusterII AFS007907 B.cereus AFS007907 Plant, core (2014) USA, North Carolina clusterVI AFS059039 B.thuringiensis AFS059039 Soil (2014) USA, North Carolina clusterIV AFS022086 B.thuringiensis AFS022086 Soil (2014) USA, New York clusterIV AFS053905 B.pseudomycoides AFS053905 Plant, Corn core (2014) USA, Illinois unclustered AFS005149 B.pseudomycoides AFS005149 Soil (2014) USA, New York unclustered AFS099364 B.toyonensis AFS099364 Plant, Corn core (2014) USA, Illinois clusterV Rock4-2 B.cereus Rock4-2 Soil USA, Maryland, Rockville clusterIV BAG2X1-2 B.c_group BAG2X1-2 Soil USA, Massachusetts, Boston clusterII ANSES118 B.anthracis ANSES118 clusterIII HuB13-1 B.c_group HuB13-1 Soil Belgium unclustered K3 B.anthracis K3 Human [pXO1+/pXO2+] South Africa clusterIII BT62 B.thuringiensis BT62 clusterIV SJ-S22 B.cereus SJ-S22 clusterIV AFS005430 B.toyonensis AFS005430 Plant, soybean seed (2014) USA, Iowa clusterV K-5975c B.c_group K-5975c Food clusterIV AFS097856 B.thuringiensis AFS097856 Plant, Soybean leaf (2014) USA, Minnesota clusterIV AFS077084 B.cereus AFS077084 Soil (2014) USA, New York clusterIV AFS055788 B.pseudomycoides AFS055788 Plant, Corn core (2014) USA, Illinois clusterI AFS088215 B.pseudomycoides AFS088215 Plant, Corn grain bin dust (2014) USA, Iowa unclustered MOD1Bc207 B.cereus MOD1 Bc207 Human, Baby Wipes (2016) USA, Maryland clusterIV MOD1Bc112 B.cereus MOD1 Bc112 Other, Powdered Infant Formula (2015) USA, Maryland clusterIII LM1212-W3 B.tropicus LM1212-W3 Animal, Insect, beetle (Oryctes gigas) (2013) France, Paris clusterIII 14294-3 B.cereus 14294-3 (M6) Food, ice cream (2004) Germany clusterII CH15 B.cytotoxicus CH 15 Food, Mashed potatoes (2015) Switzerland clusterVII CD3-2 B.tropicus CD3-2 Soil or plant, Brassica juncea rhizosphere (2018) Vietnam clusterIII AFS094460 B.cereus AFS094460 Plant, Corn core (2014) USA, North Carolina clusterIV AFS007693 B.cereus AFS007693 Soil (2013) USA, North Carolina clusterIV AFS031451 B.cereus AFS031451 Plant, core (2014) USA, North Carolina clusterVI 3166 B.anthracis 3166 Soil Bulgaria clusterIII AFS096268 B.cereus AFS096268 Plant, core (2014) USA, North Carolina clusterII AFS088784 B.cereus AFS088784 Plant, Corn core (2014) USA, North Carolina clusterIV AFS093833 B.cereus AFS093833 Plant, Corn core (2014) USA, North Carolina clusterIV AFS037512 B.cereus AFS037512 Plant, Corn core (2014) USA, North Carolina clusterIV AFS041711 B.cereus AFS041711 Plant, core (2014) USA, North Carolina clusterIV SVA11 B.anthracis SVA11 Animal, cattle (2011) [from an outbreak in cattle that occurred in a Swedish nature reserve; pXO1+/pXO2+] Sweden clusterIII AFS076597 B.thuringiensis AFS076597 Plant, core (2014) USA, North Carolina clusterIV AFS096978 B.thuringiensis AFS096978 Plant, Corn core (2014) USA, Illinois clusterIV AFS054440 B.thuringiensis AFS054440 Plant, Soybean leaf (2014) USA, Minnesota clusterIV 822BCER B.cereus 822 BCER Human USA, Washington clusterIV HD682 B.thuringiensis finitimus HD682 Japan clusterIII T03a001 B.thuringiensis kurstaki T03a001 Animal, Insect, Mediterranean flour moth/mill moth (Ephestia kuhniella/Anagasta kuehniella) (1962) France unclustered KrugerB B.anthracis Kruger B [pXO1+/pXO2+] South Africa, Kruger National Park clusterIII AFS084242 B.toyonensis AFS084242 Animal, Insect, Japanese beetle (2013) USA, Illinois clusterV AFS027629 B.toyonensis AFS027629 Plant, Soybean core (2014) USA, Iowa clusterV AFS033534 B.toyonensis AFS033534 Plant, Soybean leaf (2014) USA, Iowa clusterV AFS023418 B.thuringiensis AFS023418 Plant, Soybean core (2014) USA, Iowa clusterIV GOE8 B.weihenstephanensis GOE8 Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014) Germany, Goettingen clusterVI AFS079281 B.cereus AFS079281 Plant, Corn core (2014) USA, Illinois clusterVI AFS064137 B.thuringiensis AFS064137 Soil (2014) USA, North Carolina clusterIV AFS050333 B.thuringiensis AFS050333 Plant, Soybean core (2014) USA, Iowa clusterIV BGSC4A4 B.thuringiensis thuringiensis HD120 (BGSC4A4, HDB-2) Animal, Insect, tobacco moth/cacao moth/warehouse moth (Ephestia elutella) UK, England clusterIV 147 B.thuringiensis 147 Soil (2014) Brazil, Tocantins State clusterIV AFS051073 B.toyonensis AFS051073 Plant, Corn core (2014) USA, North Carolina clusterV 16-00191 B.cereus 16-00191 clusterIII AFS091626 B.cereus AFS091626 Plant, Soybean core (2014) USA, Iowa clusterIV AFS057784 B.thuringiensis AFS057784 Plant, Corn core (2014) USA, Illinois clusterIV AFS068272 B.wiedmannii AFS068272 Plant, Corn root (2014) USA, Iowa clusterII BGSC4BJ1 B.thuringiensis wratislaviensis BGSC4BJ1 Soil Poland clusterII AFS069829 B.pseudomycoides AFS069829 Plant, Corn core (2014) USA, Illinois unclustered I8 B.wiedmannii I8 Soil, quaking grass (Briza maxima) undisturbed soil (2016) Israel, Ramat HaNadiv clusterII AFS038153 B.toyonensis AFS038153 Plant, core (2014) USA, North Carolina clusterV K4516 B.anthracis BA1015 (A0376, K4516) Animal, cattle (Bovine) (1939) [pXO1+/pXO2+] USA, Maryland clusterIII AFS024629 B.cereus AFS024629 Soil (2014) USA, North Carolina clusterIV DE0462 B.cereus DE0462 clusterIV B4077 B.cereus B4077 Food, chilled dessert (2012) Netherlands clusterII AFS030866 B.thuringiensis AFS030866 Plant, Soybean core (2014) USA, Iowa clusterIV Kafkas-78 B.anthracis Kafkas-78 Animal, Cattle (2008) Turkey, Kars clusterIII ATCC10876 B.cereus ATCC10876 (569, AH181, IMSNU13045, NRRLB-569, NCTC7464, KCTC1092) Other, contaminated flask (1945) [well-studied strain used in many structural studies of the spore and exospore] clusterIV AFS013932 B.toyonensis AFS013932 Soil (2014) USA, New York clusterV DE0463 B.cereus DE0463 clusterIV A0248 B.anthracis A0248 (K2802, 28, LSU248) Human (1968) [pXO1+/pXO2+] USA, Ohio clusterIII VDM021 B.c_group VDM021 Soil Greenland unclustered AFS080777 B.wiedmannii AFS080777 Plant, Soybean leaf (2014) USA, Minnesota clusterII AFS045893 B.wiedmannii AFS045893 Soil (2014) USA, North Carolina clusterII AFS023506 B.thuringiensis AFS023506 Plant, Soybean core (2014) USA, Iowa clusterIV HD12 B.thuringiensis HD12 Soil (2012) USA clusterIV B4117 B.mycoides B4117 Food (2013) Netherlands clusterVI AFS078926 B.wiedmannii AFS078926 Plant, Soybean core (2014) USA, Iowa clusterII FSLK6-0069 B.wiedmannii FSL K6-0069 Dairy products, Laboratory Heat Treated Raw Milk (2012) USA, New York clusterII BAG1O-1 B.c_group BAG1O-1 Soil USA, Massachusetts, Boston clusterVI Hu4-2 B.thuringiensis aizawai Hu4-2 Other, dust sample from maize grain silo Spain clusterIV AFS008260 B.cereus AFS008260 Plant, Corn core (2014) USA, Illinois unclustered AFS057349 B.wiedmannii AFS057349 Plant, core (2014) USA, North Carolina clusterII AFS045869 B.cereus AFS045869 Plant, Corn core (2014) USA, North Carolina clusterIV AFS046081 B.thuringiensis AFS046081 Plant, Soybean leaf (2014) USA, Minnesota clusterIV SJ-S7 B.cereus SJ-S7 Human USA, Tennessee, Memphis clusterIII HuB2-9 B.c_group HuB2-9 Soil Belgium clusterV VD146 B.c_group VD146 Soil UK, Scotland clusterVI AFS048014 B.thuringiensis AFS048014 Plant, Soybean leaf (2014) USA, Iowa clusterIV JAS83/3 B.weihenstephanensis JAS83/3 Soil (2011) [MLST data different from isolate PL JAS83/3] Poland clusterVI AFS092012 B.pseudomycoides AFS092012 Plant, Corn leaf (2014) USA, Illinois clusterI MOD1Bc65 B.cereus MOD1 Bc65 Human, Baby Wipes (2016) USA, Maryland clusterIII AFS095928 B.cereus AFS095928 Plant, core (2014) USA, North Carolina clusterII AFS018409 B.thuringiensis AFS018409 Plant, Oats (2014) USA, North Carolina unclustered BA1035 B.anthracis BA1035 Human, Clinical [pXO1+/pXO2+] South Africa clusterIII BGSC4AJ1 B.thuringiensis monterrey BGSC4AJ1#1 (AH1355, GM33, T28001) [produces a polyglutamate capsule resembling that of B.anthracis; three complete genomes sequenced for this strain with identical MLST sequences] Mexico clusterIII Han B.anthracis Han Animal, dead cow blood (2013) [from the site of an anthrax outbreak] China, Liaoning Province clusterIII AFS032297 B.anthracis AFS032297 Soil (2014) USA, North Carolina clusterIII AFS013213 B.thuringiensis AFS013213 Plant, Corn core (2014) USA, Illinois clusterIV MOD1Bc90 B.cereus MOD1 Bc90 Food, Whole Black Pepper (2015) USA, Maryland clusterIII ISSFR-23F B.cereus ISSFR-23F Other, Air from the International Space Station (ISS) (2011) clusterIII MGYG-HGUT-01712 B.thuringiensis MGYG-HGUT-01712 clusterIV MOD1Bc23 B.cereus MOD1 Bc23 Food, Black Pepper Powder (2015) USA, Maryland clusterIV Ba-8785/92-Geo B.anthracis Ba-8785/92-Geo Human, Patient ulcer (1992) Georgia clusterIII AFS092659 B.cereus AFS092659 Plant, Corn core (2014) USA, North Carolina clusterIV Ba-8776/92-Geo B.anthracis Ba-8776/92-Geo Human, Patient ulcer (1992) Georgia clusterIII HKI4363/88 B.anthracis HKI4363/88 Animal, cattle (bovine) (Bos primigenius taurus) (1988) Finland, Ostrobothnia clusterIII Btm27 B.thuringiensis mexicanensis 27 (BGSC4AC2, Btm27) Animal, Insect, Citrus mealybug (Planococcus citri) (2010) Egypt unclustered BGSC4CF1 B.thuringiensis jegathesan BGSC4CF1 Malaysia clusterIV AFS067297 B.cereus AFS067297 Plant, core (2014) USA, North Carolina clusterIV MOD1Bc83 B.cereus MOD1 Bc83 Food, Whole Black Pepper (2015) USA, Maryland clusterIV BAG6O-1 B.c_group BAG6O-1 Soil USA, Massachusetts, Boston clusterV AFS039264 B.toyonensis AFS039264 Plant, Soybean core (2014) USA, Iowa clusterV AFS033388 B.cereus AFS033388 Soil (2014) USA, New York clusterVI DE0281 B.nitratireducens DE0281 clusterVI HuA4-10 B.c_group HuA4-10 Soil Belgium clusterVI BTZ B.pseudomycoides BTZ [originally submitted as B.thuringiensis but later determined to be B.mycoides and then changed to B.pseudomycoides] clusterI AFS029677 B.cereus AFS029677 Soil (2014) USA, North Carolina unclustered AFS047135 B.cereus AFS047135 Plant, Soybean core (2014) USA, Iowa clusterIV MOD1Bc195 B.cereus MOD1 Bc195 Human, Baby Wipes (2016) USA, Maryland clusterIII INTAFr7-4 B.thuringiensis INTA Fr7-4 Soil Argentina, Misiones clusterIV AFS089650 B.toyonensis AFS089650 Plant, Corn root (2014) USA, Iowa clusterV AFS057829 B.thuringiensis AFS057829 Plant, Wheat plant (2014) USA, North Carolina clusterIV T70001 B.thuringiensis sinensis T70001 clusterII B4158 B.cereus B4158 Food, vegetables and (fermented) vegetable products (2012) Netherlands clusterIV AFS025120 B.cereus AFS025120 Plant, Soybean core (2014) USA, Iowa clusterIV AFS085075 B.cereus AFS085075 Soil (2014) USA, New York clusterVI AFS040105 B.cereus AFS040105 Plant, tree leaf (2014) USA, North Carolina unclustered AFS053336 B.cereus AFS053336 Plant, Weed core (2014) USA, North Carolina clusterIV AFS060621 B.cereus AFS060621 Plant, Soybean core (2014) USA, Iowa clusterIV DE0434 B.cereus DE0434 clusterIV HD1#3 B.thuringiensis kurstaki HD1 (HD1#3) Animal, Insect larvae (2000) [strain sequenced by Los Alamos National Laboratory, Los Alamos, New Mexico, USA; MLST data conflicting with isolates BGSC4D1, ATCC33679, and HD1#2; three complete genomes sequenced for this strain: identical MLST sequences between isolates HD1#1 and HD1#3 and different sequences in isolate HD1#2] USA unclustered GOE2#1 B.thuringiensis GOE2#1 Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014) Germany, Goettingen unclustered DE0345 B.mycoides DE0345 unclustered AH1273 B.cereus AH1273 Human, blood; Reykjavik University Hospital (1997) [from the same hospital as isolates AH1270, AH1271, and AH1272] Iceland, Reykjavik clusterVI AFS094413 B.cereus AFS094413 Plant, Soybean core (2014) USA, Iowa clusterIV Rock3-44 B.cereus Rock3-44 Soil USA, Maryland, Rockville unclustered AFS045887 B.cereus AFS045887 (2014) USA, North Carolina clusterIV A0389#1 B.anthracis A0389 (K1938, 89, A0389#1) [pXO1+/pXO2+; two complete genomes sequenced for this strain with different MLST sequences; strain sequenced by Los Alamos National Laboratory, Los Alamos, New Mexico, USA; sequences conflicting with isolate A0389#2] Indonesia, West Java, Bekasi clusterIII AFS026926 B.thuringiensis AFS026926 Soil (2014) USA, Iowa clusterIV AFS099506 B.thuringiensis AFS099506 Plant, Corn root (2014) USA, Iowa clusterIV I189 B.cereus I189 Plant, Grass (2017) Israel, Karie Deshe clusterIV BGSC4AR1 B.thuringiensis jinghongiensis BGSC4AR1 Soil China clusterIV AFS088016 B.thuringiensis AFS088016 Soil (2014) USA, Iowa clusterIV MS12 B.thuringiensis MS12 Food, Mixed salad (2015) Germany, Kiel clusterIV AFS072832 B.toyonensis AFS072832 Plant, Soybean root (2014) USA, Iowa clusterV BGSC4CA1 B.thuringiensis yosoo BGSC4CA1 South Korea clusterIV AFS001991 B.thuringiensis AFS001991 Plant, Corn leaf (2014) USA, Illinois clusterIV Kafkas-149 B.anthracis Kafkas-149 Soil (2012) Turkey, Selim clusterIII AFS020011 B.toyonensis AFS020011 Plant, Grass core (2014) USA, Iowa clusterV AFS024973 B.cereus AFS024973 Plant, core (2014) USA, North Carolina clusterIV BGSC4BX1 B.thuringiensis pingluonsis BGSC4BX1 Soil, sandy soil China clusterIII AFS001073 B.cereus AFS001073 Plant, Weed leaf (2014) USA, Ohio clusterIV BR58 B.thuringiensis BR58 Plant, stored grain (2000) Brazil, Londrina clusterIV AFS067879 B.toyonensis AFS067879 Plant, Soybean leaf (2014) USA, Minnesota clusterV AFS012518 B.cereus AFS012518 Plant, Weed core (2014) USA, North Carolina clusterIII DE0306 B.mobilis DE0306 clusterII AFS031631 B.thuringiensis AFS031631 Plant, Corn root (2013) USA, Minnesota clusterIV DE0604 B.thuringiensis DE0604 clusterIV AFS088431 B.cereus AFS088431 Soil (2014) USA, New York clusterVI SJ-S2 B.cereus SJ-S2 Human USA, Tennessee, Memphis clusterIII DE0383 B.tropicus DE0383 clusterIII AFS022225 B.pseudomycoides AFS022225 Plant, Soybean core (2014) USA, Iowa unclustered MOD1Bc177 B.cereus MOD1 Bc177 Human, Baby Wipes (2016) USA, Maryland clusterIII PR06 B.anthracis PR06 USA clusterIII BGSC4BZ1 B.thuringiensis zhaodongensis BGSC4BZ1 Soil, black soil China clusterIV MS195 B.toyonensis MS195 Food, Mixed salad (2015) Germany, Kiel clusterV DE0029 B.cereus DE0029 clusterIV DAR81934#2 B.thuringiensis DAR81934 (DAR81934#2) [exhibits molluscicidal activity toward the pest snail Cernuella virgata; two complete genomes sequenced for this strain with different MLST sequences; strain sequenced by Joint Genome Institute, Walnut Creek, California, USA; sequences conflicting with isolate DAR81934#1] Australia, Port Campbell National Park clusterIV QZL38 B.thuringiensis QZL38 Soil (2018) China, Liaoning Province clusterIV AFS065710 B.pseudomycoides AFS065710 Plant, Soybean core (2014) USA, Iowa unclustered FSLH8-0534 B.pseudomycoides FSL H8-0534 Soil (2006) [soil adjacent to bovine farm] USA clusterI AFS059198 B.cereus AFS059198 Plant, Weed core (2014) USA, North Carolina clusterIV Rock3-42 B.cereus Rock3-42 Soil USA, Maryland, Rockville clusterIII AFS016919 B.thuringiensis AFS016919 Plant, core (2014) USA, North Carolina clusterIV AFS031264 B.cereus AFS031264 Plant, Soybean core (2014) USA, Iowa clusterIV AFS036159 B.cereus AFS036159 Plant, Soybean core (2014) USA, Iowa clusterIV AFS039146 B.cereus AFS039146 Plant, core (2014) USA, North Carolina clusterIV ANSES92 B.anthracis ANSES92 clusterIII AFS000938 B.wiedmannii AFS000938 Plant, Corn core (2014) USA, Illinois clusterII AFS053345 B.wiedmannii AFS053345 Plant, Soybean core (2014) USA, Iowa clusterII MOD1Bc59 B.cereus MOD1 Bc59 Human, Baby Wipes (2016) USA, Maryland clusterIII K8#2 B.cereus K8 (K8#2) Food, Korean fermented food (2016) South Korea clusterIV GM5LP B.mycoides GM5LP Plant, English ray-grass (Lolium perenne) Germany clusterVI AFS072900 B.anthracis AFS072900 Plant, Weed core (2014) USA, North Carolina clusterIII AFS066354 B.cereus AFS066354 Soil (2014) USA, North Carolina clusterIV AFS042904 B.cereus AFS042904 Plant, Wheat plant (2014) USA, North Carolina clusterII AFS035470 B.cereus AFS035470 Soil (2014) USA, New York clusterII FSLW8-0824 B.cereus FSL W8-0824 Food, Finished RTE food product (2012) USA, New York clusterIV AFS009278 B.cereus AFS009278 Plant, core (2014) USA, North Carolina clusterII HD5 B.thuringiensis kenyae HD5 clusterIV TG1-6 B.cereus TG1-6 Plant, common cord-grass (Sporobolus anglicus) China, Fujian Province, area of Zhangpu Yanchang clusterIV AFS065825 B.thuringiensis AFS065825 Plant, Soybean root (2014) USA, Minnesota clusterIV AFS017068 B.cereus AFS017068 Plant, Corn core (2014) USA, North Carolina unclustered AFS017032 B.cereus AFS017032 Plant, Corn core (2014) USA, North Carolina clusterIV AFS074602 B.toyonensis AFS074602 Plant, Soybean leaf (2014) USA, Iowa clusterV AFS002866 B.thuringiensis AFS002866 Plant, Soybean leaf (2014) USA, Minnesota clusterIV DE0589 B.thuringiensis DE0589 unclustered AFS029617 B.cereus AFS029617 Plant, Corn core (2014) USA, North Carolina clusterIV AFS089089 B.thuringiensis AFS089089 Plant, Corn grain bin dust (2013) USA, Iowa clusterIV AFS071454 B.thuringiensis AFS071454 Plant, Soybean root (2014) USA, Missouri clusterIV BAG1X2-1 B.c_group BAG1X2-1 Soil USA, Massachusetts, Boston unclustered BGSC4M3#2 B.thuringiensis darmstadiensis HD146 (T10003, AH451, DSM6091, 10/103, BGSC4M1 or BGSC4M3, BGSC4M3#2) Animal, Insect, silkworm (Bombyx mori) (2013) [two complete genomes sequenced for this strain with different MLST sequences and origins; strain sequenced by Biology and Biochemistry, University of Bath, England, UK; sequences conflicting with isolate BGSC4M3#1] UK clusterIV Tyrol4675 B.anthracis Tyrol 4675 Animal, cattle (Cow) (1988) Austria, Tyrol clusterIII m1293 B.cereus m1293 (BPS-2, BGSC6A54) Dairy products, cream cheese (1987) Brazil clusterIII IBL4222 B.thuringiensis IBL4222 Animal, cat-s paw (1985) [israelensis-like serovar] USA, Maryland clusterIV AFS031473 B.thuringiensis AFS031473 Plant, Oats (2014) USA, North Carolina unclustered MOD1Bc71 B.cereus MOD1 Bc71 Food, Paprika (2015) USA, Maryland unclustered AFS085606 B.cereus AFS085606 Soil (2014) USA, North Carolina clusterIV AFS090477 B.thuringiensis AFS090477 Plant, Soybean leaf (2014) USA, Minnesota clusterIV AFS042581 B.wiedmannii AFS042581 Animal, earthworm (2013) USA, Minnesota clusterII FSLW8-0275 B.cereus FSL W8-0275 Dairy products, Raw liquid milk and whey perm (2012) USA, New York clusterIII AFS027250 B.thuringiensis AFS027250 Plant, Corn leaf (2014) USA, Illinois clusterIV AFS095548 B.cereus AFS095548 Plant, Soybean core (2014) USA, Iowa clusterIV BT-59 B.thuringiensis BT-59 Soil (2015) China, Yangzhou clusterIV AFS009778 B.cereus AFS009778 Soil (2013) USA, North Carolina clusterIV Bt-ICA/UNMSM10RA B.thuringiensis ICA/UNMSM10RA (Bt-ICA/UNMSM10RA) (2010) Peru, Huaral unclustered BGSC4BM1 B.thuringiensis navarrensis BGSC4BM1 Soil Spain clusterVI AFS080834 B.pseudomycoides AFS080834 Plant, Weed leaf (2014) USA, Ohio unclustered KB1 B.thuringiensis KB1 Plant, thale cress (Arabidopsis thaliana) apoplast (2012) South Korea, Daejeon clusterIII MOD1Bc72 B.cereus MOD1 Bc72 Food, Paprika (2015) USA, Maryland clusterIII AFS036381 B.cereus AFS036381 Plant, Corn core (2014) USA, North Carolina clusterIV INTAMo4-4 B.thuringiensis INTA Mo4-4 Other, Stored product dust (1998) Argentina, Chacabuco, Buenos Aires province clusterIV BMG1.7 B.c_group BMG1.7 unclustered AFS037926 B.cereus AFS037926 Plant, Soybean core (2014) USA, Iowa clusterIV AFS029052 B.cereus AFS029052 Plant, Weed core (2014) USA, North Carolina clusterIV MS17 B.mycoides MS17 Food, Mixed salad (2015) Germany, Kiel clusterVI AFS042818 B.toyonensis AFS042818 (2014) USA, North Carolina clusterV BGSC4BQ1 B.thuringiensis asturiensis BGSC4BQ1 Soil Spain clusterVI AFS076861 B.thuringiensis AFS076861 Plant, tree leaf (2014) USA, North Carolina clusterIV MOD1Bc89 B.cereus MOD1 Bc89 Food, Whole Black Pepper (2015) USA, Maryland clusterIII AFS084444 B.cereus AFS084444 (2014) USA, North Carolina clusterVI I153 B.cereus I153 Plant, Grass (2017) Israel, Karie Deshe clusterIV Ba-1802/12-Geo B.anthracis Ba-1802/12-Geo Human, Patient ulcer (2012) Georgia clusterIII BLB406 B.thuringiensis BLB406 Soil (2009) Tunisia clusterIV LLCG23 B.wiedmannii LLCG23 Soil (2005) China, Tibet clusterII AFS038754 B.cereus AFS038754 Soil (2013) USA, North Carolina clusterIV AFS067814 B.wiedmannii AFS067814 Soil (2014) USA, New York clusterII AFS093610 B.cereus AFS093610 (2014) USA, North Carolina clusterII AFS086528 B.cereus AFS086528 Plant, core (2014) USA, North Carolina clusterIV AFS040794 B.anthracis AFS040794 Plant, core (2014) USA, North Carolina clusterIII AFS085496 B.thuringiensis AFS085496 Plant, core (2014) USA, North Carolina clusterIV AFS054136 B.thuringiensis AFS054136 Plant, Corn grain bin dust (2013) USA, Iowa clusterIV AFS051123 B.toyonensis AFS051123 Plant, Wheat plant (2014) USA, North Carolina clusterV AFS045152 B.cereus AFS045152 Plant, Corn core (2014) USA, North Carolina clusterIV A1075 B.anthracis A1075 Animal, cattle [pXO1+/pXO2+] Chile, Lago Ranco-Valdivia Agricola Quillin Va. Region clusterIII Bc601 B.thuringiensis Bc601 (2012) China, Tianjin unclustered FSLM8-0117 B.cereus FSL M8-0117 Dairy products, Laboratory Heat Treated Raw Milk (2012) USA, New York clusterIII HD29 B.thuringiensis galleriae galleriae HD29 (AH445, BGSC4G5, CCEB565, DSM6110) Animal, Insect, Siberian moth (Dendrolimus sibiricus) Czechoslovakia or USSR clusterIV 13061 B.cereus 13061 clusterIII AFS046374 B.cereus AFS046374 Plant, Corn core (2014) USA, North Carolina clusterIV MOD1Bc68 B.cereus MOD1 Bc68 Food, Black Pepper Powder (2015) USA, Maryland clusterIV ATCC6462 B.mycoides type strain DSM2048 (ATCC6462, WS2641, NRS273, NCTC12974, CIP103472, KCTC3453) Soil South Korea, Seoul clusterVI KNU-07 B.thuringiensis KNU-07 Plant, Ginseng (2015) South Korea clusterIV AFS053130 B.cereus AFS053130 Soil (2014) USA, Iowa clusterVI NA205-3 B.thuringiensis tolworthi NA205-3 Other, dust from maize silo Spain clusterIV AFS041003 B.cereus AFS041003 Plant, Tomato plant (2014) USA, North Carolina unclustered AFS088703 B.pseudomycoides AFS088703 Plant, Soybean core (2014) USA, Iowa unclustered Rock3-17 B.mycoides Rock3-17 Soil USA, Maryland, Rockville unclustered AFS098983 B.cereus AFS098983 Soil (2014) USA, New York clusterVI AFS047977 B.cereus AFS047977 Plant, core (2014) USA, North Carolina clusterII AFS079629 B.cereus AFS079629 (2014) USA, North Carolina clusterII VD140 B.c_group VD140 Soil UK, Scotland clusterIV Kafkas-68 B.anthracis Kafkas-68 Animal, Cattle (2007) Turkey, Kars clusterIII DE0364 B.nitratireducens DE0364 clusterVI DSM2302 B.cereus DSM2302 Food poisoning incident (1980) Canada, Ontario, Toronto clusterIII 16-00187 B.cereus 16-00187 clusterIV AFS099300 B.toyonensis AFS099300 Plant, core (2014) USA, North Carolina clusterV MRIK1 B.cereus MRIK1 Soil (2013) India, Majuli River Island, Assam clusterIV S2-8 B.cereus S2-8 (FRI42) Soil (1993) [University of Wisconsin-Madison] USA, Wisconsin, Madison clusterIII 2000032967 B.anthracis 2000032967 clusterIII AFS009314 B.toyonensis AFS009314 Soil (2014) USA, Iowa clusterV AFS013084 B.wiedmannii AFS013084 Soil (2014) USA, New York clusterII AFS040392 B.thuringiensis AFS040392 Plant, Grass leaf (2013) USA, North Carolina clusterIV MOD1Bc225 B.cereus MOD1 Bc225 Human, faeces/stools (2016) USA, Maryland clusterIII MOD1Bc208 B.cereus MOD1 Bc208 Human, Baby Wipes (2016) USA, Maryland clusterIV ANSES88 B.anthracis ANSES88 clusterIII AFS014334 B.thuringiensis AFS014334 Plant, Soybean core (2014) USA, Iowa clusterIV AFS066710 B.thuringiensis AFS066710 Plant, Corn root (2014) USA, Iowa clusterIV AFS028351 B.cereus AFS028351 Plant, core (2014) USA, North Carolina clusterIV AFS024615 B.thuringiensis AFS024615 Plant, core (2014) USA, North Carolina clusterIV DE0018 B.nitratireducens DE0018 clusterVI AFS081367 B.cereus AFS081367 Plant, core (2014) USA, North Carolina clusterIV AFS004701 B.cereus AFS004701 Plant, Corn core (2014) USA, North Carolina unclustered AFS033741 B.cereus AFS033741 Plant, Oats plant (2014) USA, North Carolina clusterIV VD045 B.c_group VD045 Soil Greenland clusterIV 16-00175 B.cereus 16-00175 clusterIII FJAT-13831 B.bingmayongensis type strain FJAT-13831 (CGMCC1.12043, DSM25427) Soil (2010) [soil on the Terracotta Warriors from the No. 1 pit of the Mausoleum of the First Qin Emperor] China, Shaanxi, Xi-an City unclustered AFS089785 B.cereus AFS089785 Plant, Corn core (2014) USA, Illinois clusterVI MH19 B.cereus MH19 Soil (2017) [two complete genomes sequenced for this strain with identical MLST sequences] China, Luoyang clusterIII AFS022050 B.pseudomycoides AFS022050 Plant, Corn core (2014) USA, Illinois unclustered MSX-D12 B.c_group MSX-D12 clusterIII I16 B.cereus I16 Plant, Grass (2017) Israel, Ramat HaNadiv clusterIV AFS051208 B.toyonensis AFS051208 Plant, Weed plant (2014) USA, Indiana clusterV HD11 B.thuringiensis aizawai HD11 (T07001, BGSC4J4, HA3, HD114, HD227) Animal, Insect, Oriental Tobacco Budworm/Cape Gooseberry Budworm (Heliothis assulta/Helicoverpa assulta) Japan clusterIV AFS046340 B.cereus AFS046340 Plant, Corn core (2014) USA, North Carolina unclustered HuB5-5 B.c_group HuB5-5 Soil Belgium clusterV DE0332 B.thuringiensis DE0332 clusterIV SJ-S4 B.toyonensis SJ-S4 Human USA, Tennessee, Memphis clusterV Sbt003 B.thuringiensis Sbt003 Soil (2010) China, Hubei Province clusterIV CH39 B.cytotoxicus CH 39 Food, Mashed potatoes (2014) Switzerland clusterVII COVASU B.anthracis COVASU clusterIII GOE3#2 B.weihenstephanensis GOE3#2 Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014) Germany, Goettingen clusterVI AFS070247 B.toyonensis AFS070247 Plant, Weed leaf (2014) USA, Indiana clusterV AFS076904 B.cereus AFS076904 Plant, Corn root (2013) USA, Iowa clusterIII AFS038126 B.cereus AFS038126 Plant, Weed core (2014) USA, North Carolina clusterIV AFS048213 B.cereus AFS048213 Plant, core (2014) USA, North Carolina clusterIV SN4-1 B.pacificus SN4-1 Animal, Insect, European Corn Borer (Ostrinia nubilalis) (2018) Vietnam clusterIII K1285 B.anthracis K1285 (93/37, A0188) [pXO1+/pXO2+] Namibia clusterIII DS201579 B.anthracis DS201579 Animal, Blue Wildebeest (Connochaetes taurinus) (2015) South Africa, Kruger National Park, Pafuri clusterIII AFS058633 B.anthracis AFS058633 Plant, Corn core (2014) USA, North Carolina clusterIII N24 B.tropicus type strain N24 (MCCC1A01406, KCTC33711, LMG28874) Other, sediments (2002) China, South China Sea clusterIII AFS079389 B.cereus AFS079389 Plant, Soybean leaf (2014) USA, Illinois unclustered AFS073563 B.wiedmannii AFS073563 Plant, Corn grain bin dust (2013) USA, Iowa clusterII AFS079591 B.anthracis AFS079591 Plant, Corn core (2014) USA, North Carolina clusterIII AFS095804 B.toyonensis AFS095804 Plant, Corn core (2014) USA, Illinois clusterV AFS045441 B.cereus AFS045441 (2014) USA, Iowa clusterIV AFS049517 B.toyonensis AFS049517 Plant, Corn core (2014) USA, Illinois clusterV VDM053 B.c_group VDM053 Other, Water from a small pond site Belgium clusterVI RIVMBC485 B.cereus RIVMBC485 (KAL285) (2001) clusterII AFS090208 B.pseudomycoides AFS090208 Plant, Corn grain bin dust (2013) USA, Iowa clusterI AFS027674 B.toyonensis AFS027674 Plant, Corn core (2014) USA, Illinois clusterV AFS032210 B.pseudomycoides AFS032210 Plant, Weed leaf (2014) USA, Ohio unclustered AFS037584 B.cereus AFS037584 Plant, Corn core (2014) USA, Illinois clusterIV AFS002508 B.wiedmannii AFS002508 Plant, Soybean core (2014) USA, Iowa clusterII AFS063338 B.wiedmannii AFS063338 Soil (2014) USA, Iowa clusterII FSLH7-0926 B.cereus FSL H7-0926 Dairy products, Pasteurized 2% milk (2005) USA, New York clusterVI SJ-S25 B.cereus SJ-S25 Human USA, Tennessee, Memphis clusterIII AFS074533 B.cereus AFS074533 Plant, core (2014) USA, North Carolina clusterII AFS066620 B.toyonensis AFS066620 Plant, Soybean core (2014) USA, Iowa clusterV BGSC4AY1 B.thuringiensis brasilensis BGSC4AY1 (AH1356, T39001) Food, black pepper powder Brazil clusterIII AFS024429 B.wiedmannii AFS024429 Plant, Corn core (2014) USA, Illinois clusterII T63001 B.thuringiensis bolivia T63001 Bolivia unclustered I69 B.cereus I69 Plant, Grass (2017) Israel, Ramat HaNadiv unclustered AFS075683 B.thuringiensis AFS075683 Animal, earthworm (2013) USA, Minnesota clusterIV YBT-1520#2 B.thuringiensis kurstaki YBT-1520 (YBT-1520#2) [two complete genomes sequenced for this strain with different MLST sequences; both genomes sequenced by State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, Hubei, China; sequences conflicting with isolate YBT-1520#1] unclustered AFS038165 B.cereus AFS038165 Soil (2014) USA, New York clusterII Zimbabwe89 B.anthracis Zimbabwe89 Zimbabwe clusterIII AFS022028 B.thuringiensis AFS022028 Plant, Soybean leaf (2014) USA, Minnesota clusterIV AFS025457 B.cereus AFS025457 Plant, Corn leaf (2014) USA, North Carolina unclustered MB.21 B.cereus MB.21 Food (2014) Germany, Munich clusterIII HZBCE-01 B.cereus HZBCE-01 Human, stomach (2015) China, Hangzhou clusterIII BacAer B.toyonensis BacAer Human, biopsy of an epithelial lesion Brazil, Rio de Janeiro clusterV AFS074793 B.cereus AFS074793 Plant, Corn core (2014) USA, North Carolina clusterIV AFS065389 B.toyonensis AFS065389 Plant, Corn root (2014) USA, Indiana clusterV AFS041497 B.cereus AFS041497 Plant, core (2014) USA, North Carolina clusterIV MOD1Bc182 B.cereus MOD1 Bc182 Human, Baby Wipes (2016) USA, Maryland clusterIII AFS008599 B.pseudomycoides AFS008599 Soil (2014) USA, Iowa clusterI FSLM7-0669 B.mycoides FSL M7-0669 Dairy products, raw milk (2011) USA clusterVI Ba-1897/12-Geo B.anthracis Ba-1897/12-Geo Food, Beef (2012) Georgia clusterIII I186 B.mycoides I186 Plant, Grass (2017) Israel, Karie Deshe clusterVI CVCS12 B.cereus CVC S12 Human, central venous catheter (2013) Pakistan, Lahore clusterIII AFS010272 B.cereus AFS010272 Plant, Corn core (2014) USA, Illinois clusterIV NZAS03 B.cereus NZAS03 Food, unpasteurized egg white (2015) New Zealand, Dunedin clusterII 062011msu B.cereus 062011 msu Animal, domestic sheep (Ovis aries) (2010) India, Tamil Nadu, Tirunelveli District, Maruthamputhur village near Alangulam Region clusterIII AFS034338 B.cereus AFS034338 Plant, Core Other Plant (2014) USA, North Carolina clusterII AFS072097 B.cereus AFS072097 Plant, Tomato plant (2014) USA, North Carolina unclustered AFS043269 B.toyonensis AFS043269 Plant, Corn leaf (2014) USA, Ohio clusterV BM-BT15426 B.thuringiensis BM-BT15426 (2015) China, Guangzhou clusterIII AFS016962 B.cereus AFS016962 Plant, core (2014) USA, North Carolina clusterVI AFS049391 B.toyonensis AFS049391 Plant, Corn core (2014) USA, Illinois clusterV AFS005864 B.wiedmannii AFS005864 Plant, Corn (2014) USA, Minnesota clusterII AFS034073 B.wiedmannii AFS034073 Plant, Soybean core (2014) USA, Iowa clusterII AFS047495 B.thuringiensis AFS047495 Plant, Corn (2014) USA, Iowa clusterIV AFS020690 B.wiedmannii AFS020690 Food, Mushroom (2013) USA, Iowa clusterII DE0555 B.thuringiensis DE0555 clusterII AFS052460 B.thuringiensis AFS052460 Soil (2014) USA, Iowa clusterIV F14/1 B.thuringiensis F14/1 clusterIV DE0313 B.mobilis DE0313 clusterII MIT0214 B.cereus MIT0214 Other, Deep subsurface (2010) [isolated through enrichment of samples from geologic sequestration sites in pressurized bioreactors containing a supercritical CO2 headspace] USA, Texas clusterIV FORC60 B.cereus FORC60 Food, cucumber (2016) South Korea, Gwangju clusterIV AFS068780 B.toyonensis AFS068780 Other, excrement (2014) USA, Iowa clusterV AFS001949 B.pseudomycoides AFS001949 Plant, Soybean core (2014) USA, Iowa unclustered AFS084980 B.toyonensis AFS084980 Plant, Corn core (2014) USA, North Carolina clusterV SPV842_15 B.anthracis SPV842_15 Animal, cattle (bovine) (Bos taurus) liver [from bovine aborted fetus] (2015) Brazil clusterIII FSLW8-0169 B.wiedmannii FSL W8-0169 Dairy products, Raw milk (2012) USA, New York clusterII AFS072674 B.toyonensis AFS072674 Plant, Soybean leaf (2014) USA, Iowa clusterV WH2015 B.cereus WH2015 Food, turbot (2015) China, Wuhan clusterIII SJ-S18 B.cereus SJ-S18 Human USA, Tennessee, Memphis clusterIV AFS061806 B.cereus AFS061806 Plant, Corn root (2014) USA, Iowa clusterVI AFS035117 B.toyonensis AFS035117 Plant, Grass core (2014) USA, Iowa clusterV AFS082731 B.toyonensis AFS082731 Plant, Weed plant (2014) USA, Indiana clusterV AFS045990 B.toyonensis AFS045990 Plant, Corn (2014) USA, Iowa clusterV AFS056280 B.thuringiensis AFS056280 Plant, core (2014) USA, North Carolina clusterIV AFS040438 B.thuringiensis AFS040438 Plant, Corn core (2014) USA, Illinois clusterIV 11kri323 B.mycoides 11kri323 Other, Water (2011) Greece, Kavala, Krinides clusterVI LP2YM B.thuringiensis LP 2 YM USA, Yosemite National Park, California clusterII AFS000230 B.pseudomycoides AFS000230 Plant, Corn root (2014) USA, Iowa unclustered AFS066590 B.toyonensis AFS066590 Plant, Soybean leaf (2014) USA, Minnesota clusterV AFS057498 B.wiedmannii AFS057498 Plant, Weed plant (2014) USA, Indiana clusterII AFS067067 B.toyonensis AFS067067 Plant, Corn (2014) USA, Iowa clusterV AFS099677 B.thuringiensis AFS099677 Plant, core (2014) USA, North Carolina clusterIV Rock4-18 B.cereus Rock4-18 Soil USA, Maryland, Rockville clusterV AFS031137 B.wiedmannii AFS031137 Plant, core (2014) USA, North Carolina clusterII PgBE311 B.cereus PgBE311 Plant, ginseng (Panax ginseng) (2017) clusterIV G9241#2 B.cereus G9241#2 (G9241) Animal, fish from river (2013) [carries pXO1 plasmid with anthrax virulence genes and produces a polysaccharide capsule; two complete genomes sequenced for this strain with identical MLST sequences; strain named G9241 but sequences conflicting with isolate G9241#1 and different origin] Pakistan, Ravi River clusterIII EB422 B.pacificus type strain EB422 (MCCC1A06182, KCTC33858) Other, seawater (2007) Pacific Ocean clusterIII BGSC4C3 B.thuringiensis alesti HD4 (BGSC4C3, 143) Animal, Insect, silkworm (Bombyx mori) France clusterIV G03 B.thuringiensis G03 Soil (2003) China, Hebei, Baoding clusterIV VD048 B.c_group VD048 Soil Greenland clusterVI AFS004356 B.thuringiensis AFS004356 Plant, Corn root (2014) USA, Iowa clusterIV Es2-45 B.toyonensis Es2-45 Soil (2012) China, Enshi clusterII AFS074868 B.cereus AFS074868 Plant, Corn leaf (2014) USA, Iowa clusterIV BGSC4AG1 B.thuringiensis silo BGSC4AG1 Other, grain silo France clusterIV FSLK6-0073 B.cereus FSL K6-0073 Dairy products, Laboratory Heat Treated Raw Milk (2012) USA, New York clusterIV AFS001450 B.toyonensis AFS001450 Plant, Corn (2014) USA, Iowa clusterV AFS030602 B.toyonensis AFS030602 Plant, Tomato plant (2014) USA, North Carolina clusterV VD022 B.c_group VD022 Other, Water from a small pond site Belgium clusterIV B4084 B.cereus B4084 Food (2013) Netherlands clusterIV DE0163 B.thuringiensis DE0163 clusterIII AFS042177 B.cereus AFS042177 Plant, core (2014) USA, North Carolina clusterII EGD-AQ9 B.cereus EGD-AQ9 Other, sewage (2016) India, Maharashtra, Nagpur clusterIII MOD1Bc60 B.cereus MOD1 Bc60 Human, Baby Wipes (2016) USA, Maryland clusterIII AFS008436 B.cereus AFS008436 Plant, Corn core (2014) USA, North Carolina clusterIV FSLW8-0523 B.cereus FSL W8-0523 Other, Blended liquid whey silo (2012) USA, New York clusterIII BGSC4BG1 B.thuringiensis roskildiensis BGSC4BG1 (T45001, DMU38) Plant, leaves of ivy Denmark unclustered AFS076401 B.cereus AFS076401 Soil (2014) USA, North Carolina clusterIV AFS058037 B.anthracis AFS058037 Plant, core (2014) USA, North Carolina clusterIII AFS072190 B.toyonensis AFS072190 Plant, Corn root (2014) USA, Iowa clusterV AFS002053 B.toyonensis AFS002053 Plant, Corn (2014) USA, Minnesota clusterV A50 B.cereus A50 (2014) Australia clusterIV DE0246 B.cereus DE0246 clusterIV AFS067935 B.cereus AFS067935 Plant, Weed core (2014) USA, North Carolina clusterIV I62 B.cereus I62 Plant, Grass (2017) Israel, Ramat HaNadiv clusterIV AFS033440 B.cereus AFS033440 Plant, Soybean core (2014) USA, Iowa unclustered AFS012232 B.thuringiensis AFS012232 Plant, Weed plant (2014) USA, Indiana clusterIV A0157 B.anthracis A0157 (NR-1041) Animal, Pig (1996) [derived from strain ATCC4728; pXO1-/pXO2+] USA clusterIII GOE11 B.weihenstephanensis GOE11 Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014) Germany, Goettingen clusterVI AFS093065 B.toyonensis AFS093065 Plant, Soybean root (2014) USA, Iowa clusterV WBt-2 B.thuringiensis WBt-2 Soil (2003) China, Hebei, Baoding clusterIV AFS007502 B.cereus AFS007502 Soil (2014) USA, New York clusterVI AFS038041 B.cereus AFS038041 Plant, Corn core (2014) USA, North Carolina unclustered AFS044250 B.toyonensis AFS044250 Soil (2013) USA, North Carolina clusterV AFS086178 B.thuringiensis AFS086178 (2014) USA, Iowa clusterIV 910BCER B.cereus 910 BCER Human USA, Washington clusterIII AFS014679 B.cereus AFS014679 Plant, core (2014) USA, North Carolina clusterIV FSLR5-860 B.weihenstephanensis FSL R5-860 Dairy products, pasteurized milk (2006) USA unclustered TI B.anthracis Tsiankovskii-I (TI) [Soviet Union livestock vaccine strain; pXO1+/pXO2+] USSR clusterIII AFS098399 B.thuringiensis AFS098399 Plant, Soybean leaf (2014) USA, Iowa clusterIV AFS058254 B.thuringiensis AFS058254 Plant, Soybean leaf (2014) USA, Minnesota clusterIV KCTC13318 B.gaemokensis type strain KCTC13318 (MCCC1A00707, BL3-6, JCM15801) [Yellow Sea tidal flat sediment (2011) [two complete genomes sequenced for this strain with different MLST sequences and origins; strain sequenced by Super-Bacteria Research Center, KRIBB, Daejeon, South Korea; sequences conflicting with isolate JCM15801]] South Korea, Yellow Sea clusterI ATCC10792#2 B.thuringiensis thuringiensis type strain ATCC10792 (IMSNU12088, DSM2046, WS2734, AH1083, HD735, CIP53.137, KCTC3452, KCTC1034, BGSC4A11, ATCC10792#2) Animal tissue (1946) [three complete genomes sequenced for this strain with different sequences and origins; strain sequenced by School of Applied Biosciences, Kyungpook National University, Daegu, South Korea; sequences conflicting with isolates ATCC10792#1 and ATCC10792#3] USA clusterIV AFS075396 B.thuringiensis AFS075396 Plant, Soybean leaf (2014) USA, Minnesota clusterIV AFS028541 B.toyonensis AFS028541 Plant, Corn core (2014) USA, Illinois clusterV MLY1 B.cereus MLY1 Other, activated sludge (2008) China, Shaoxing clusterIV AFS019647 B.cereus AFS019647 Plant, Corn core (2014) USA, North Carolina clusterIV AFS095482 B.thuringiensis AFS095482 Other, excrement (2014) USA, Iowa clusterIV AFS077649 B.cereus AFS077649 Soil (2014) USA, New York clusterII N35-10-2 B.albus type strain N35-10-2 (MCCC1A02146, KCTC33710, LMG28875) Other, sediments (2002) China, South China Sea clusterII AFS020202 B.toyonensis AFS020202 Plant, Weed plant (2014) USA, North Carolina clusterV AFS037377 B.anthracis AFS037377 Plant, core (2014) USA, North Carolina clusterIII MOD1Bc30 B.cereus MOD1 Bc30 Food, Dietary Supplements (2015) USA, Maryland unclustered LM1212 B.thuringiensis LM1212 Animal, Insect, beetle (Oryctes gigas) cadaver [differentiates into crystal producers or spore formers during the stationary phase; two complete genomes sequenced for this strain with identical MLST sequences] Madagascar clusterIII BGSC4J3 B.thuringiensis aizawai/pacificus HD133 (BGSC4J3, HDB-20) Animal, Insect, Indian meal moth (Plodia interpunctella) [three complete genomes sequenced for this strain with identical MLST sequences] UK, England clusterIV ANSES00-82 B.anthracis ANSES00-82 (00-82) Animal, cattle (bovine) (2000) France, Savoie clusterIII MOD1Bc106 B.cereus MOD1 Bc106 Other, Oxytetracycline Medicated Fish Feed (2006) USA, Maryland clusterIII BGSC4R1 B.thuringiensis indiana or dakota BGSC4R1 clusterIV AFS050720 B.cereus AFS050720 Plant, Soybean plant (2014) USA, North Carolina unclustered CH4 B.cytotoxicus CH 4 Food, Mashed potatoes (2015) Switzerland clusterVII AFS095380 B.toyonensis AFS095380 (2014) USA, Iowa clusterV MOD1Bc186 B.cereus MOD1 Bc186 Human, Baby Wipes (2016) USA, Maryland clusterIII BGSC4H2 B.thuringiensis canadensis P1 EM4 (BGSC4H2, T05a001, AH252, KB003) (1968) Canada unclustered AFS085871 B.cereus AFS085871 Plant, Weed core (2014) USA, North Carolina clusterIV ATCC14579#2 B.cereus type strain ATCC14579 (AH923, BGSC6A5, KB001, KCTC3624, NCTC2599, ATCC14579#2) Other, Farm, cow-shed air (1916) [strain sequenced by Key Laboratory of Microbial Technology and Bioinformatics of Zhejiang Province, Hangzhou, China; MLST data conflicting with isolate ATCC14579#1; three complete genomes sequenced for this strain: identical MLST sequences between isolates ATCC14579#2 and ATCC14579#3 and different sequences in isolate ATCC14579#1] clusterIV AFS083349 B.toyonensis AFS083349 Soil (2014) USA, North Carolina clusterV MOD1Bc223 B.wiedmannii MOD1 Bc223 Food, food product (2016) USA, Maryland clusterII B4086 B.cereus B4086 Food, boiled rice (2012) Netherlands clusterIII ATCC11950 B.cereus W (ATCC11950) Soil [carries the prophage W; W and its lytic variant, phage gamma, infect B.anthracis] clusterIII AFS018041 B.cereus AFS018041 Soil (2014) USA, New York clusterIV MW B.thuringiensis MW Other, freshwater stream (2019) USA, New Hampshire, Mont Vernon clusterIV AFS092566 B.cereus AFS092566 Soil (2014) USA, New York unclustered BGSC4AW1#2 B.thuringiensis andalousiensis BGSC4AW1 (T37001, BGSC4AW1#2) [two complete genomes sequenced for this strain with different MLST sequences; strain sequenced by State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, Hubei, China; sequences conflicting with isolate BGSC4AW1#1] Spain clusterIV 16-00221 B.cereus 16-00221 clusterIII AFS095385 B.toyonensis AFS095385 Plant, Corn root (2014) USA, Iowa clusterV AFS045932 B.pseudomycoides AFS045932 Soil (2014) USA, New York unclustered Rock1-4 B.mycoides Rock1-4 Soil USA, Maryland, Rockville unclustered HZBCE-07 B.cereus HZBCE-07 Food, Fried fish (2015) China, Hangzhou clusterIII AFS052676 B.thuringiensis AFS052676 Plant, Soybean leaf (2014) USA, Iowa clusterIV AFS079244 B.cereus AFS079244 Plant, Corn core (2014) USA, North Carolina clusterIV BGSC4BC1 B.thuringiensis guiyangiensis BGSC4BC1 Soil China unclustered DE0302 B.thuringiensis DE0302 clusterIV AFS080002 B.cereus AFS080002 Soil (2014) USA, New York clusterIV AFS003097 B.thuringiensis AFS003097 (2014) USA, North Carolina clusterIV AH621 B.c_group AH621 Soil, heather soil (1994) Norway, Singsaas/Saetereng clusterVI AFS051030 B.cereus AFS051030 (2014) USA, Iowa clusterIV A0465 B.anthracis LSU465 (K2762, A0465, RA3, 6445/RA3) Animal, cattle (Cow), spleen (1997) [two complete genomes sequenced for this strain with identical MLST sequences; pXO1+/pXO2+] France, Pyrenees mountains clusterIII AFS017700 B.cereus AFS017700 Plant, Soybean core (2014) USA, Iowa clusterIV 105Ne B.cereus 105Ne Other, Water (2011) Switzerland, Neuchatel, Ponts-de-Martel clusterV MOD1Bc98 B.cereus MOD1 Bc98 Other, Oxytetracycline Medicated Fish Feed (2006) USA, Maryland clusterIII HuB4-10 B.c_group HuB4-10 Soil Belgium clusterV Buibui B.thuringiensis japonensis Buibui Animal, Insect, Coleoptera (2013) UK clusterIV VD154 B.c_group VD154 Soil UAE, Abu Dhabi clusterIV SDANFFE664 B.weihenstephanensis SDA NFFE664 Dairy water hose (1997) [from the same dairy as isolates SDANFFE640 and SDANFFE647] Norway (Southern) clusterVI Ba-9065/08-Geo B.anthracis Ba-9065/08-Geo Human, Patient ulcer (2008) Georgia clusterIII AFS048789 B.thuringiensis AFS048789 Soil (2014) USA, Iowa clusterIV AFS028514 B.cereus AFS028514 Plant, Corn core (2014) USA, Illinois clusterIV AFS058843 B.thuringiensis AFS058843 Plant, core (2014) USA, North Carolina clusterIV AFS023732 B.wiedmannii AFS023732 Soil (2014) USA, Iowa clusterII FSLP4-0569 B.wiedmannii FSL P4-0569 Dairy food in process (2010) USA, New York clusterII ATCC4342 B.cereus ATCC4342 (AH226, AH821) Dairy products, milk (1900) [sensitive to gamma phage infecting B.anthracis; two complete genomes sequenced for this strain with identical MLST sequences] USA clusterIII AFS061931 B.wiedmannii AFS061931 Soil (2014) USA, New York clusterII CT-43 B.thuringiensis chinensis CT-43 (BGSC4CG1) China clusterIV AFS065707 B.thuringiensis AFS065707 Soil (2014) USA, North Carolina clusterIV AFS025485 B.cereus AFS025485 Plant, Corn (2014) USA, Iowa clusterIV GOE2#2 B.weihenstephanensis GOE2#2 Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014) Germany, Goettingen clusterVI AFS043837 B.cereus AFS043837 Plant, Corn core (2014) USA, North Carolina unclustered AFS036423 B.cereus AFS036423 Plant, Corn root (2014) USA, Iowa clusterVI NCTC7464 B.cereus NCTC7464 clusterIV MOD1Bc56 B.cereus MOD1 Bc56 Human, Baby Wipes (2016) USA, Maryland clusterIII AFS030663 B.cereus AFS030663 Plant, Soybean core (2014) USA, Iowa clusterIV AFS045844 B.wiedmannii AFS045844 Plant, core (2014) USA, North Carolina clusterII AFS045312 B.toyonensis AFS045312 Soil (2014) USA, North Carolina clusterV AFS026346 B.wiedmannii AFS026346 Soil (2014) USA, North Carolina clusterII MOD1Bc231 B.cereus MOD1 Bc231 Food, food product (2016) USA, Maryland unclustered AFS066671 B.thuringiensis AFS066671 Plant, Corn root (2014) USA, Iowa clusterIV AFS070359 B.thuringiensis AFS070359 Plant, Corn core (2014) USA, Illinois clusterIV SJ-S1 B.cereus SJ-S1 clusterIV AFS010157 B.wiedmannii AFS010157 Plant, Corn core (2014) USA, Illinois clusterII AFS039692 B.cereus AFS039692 Soil (2013) USA, North Carolina clusterIV AFS043063 B.thuringiensis AFS043063 Plant, Soybean leaf (2014) USA, Minnesota clusterIV AFS022362 B.cereus AFS022362 Soil (2014) USA, New York clusterVI BGSC4BP1 B.thuringiensis kim BGSC4BP1 Soil, sesame field South Korea clusterIV Australia94 B.anthracis Australia94 (K4834, A0039, 29/32) Animal, cattle (Bovine) (1994) [pXO1+/pXO2+] Australia, Victoria Province clusterIII P417 B.anthracis BAP417 clusterIII 2000032979 B.anthracis 2000032979 USA, New Jersey clusterIII AFS079576 B.thuringiensis AFS079576 Plant, core (2014) USA, North Carolina clusterIV DE0085 B.mobilis DE0085 clusterII BDRD-ST196 B.cereus BDRD-ST196 [Biological Defense Research Directorate (BDRD)] USA, Maryland, Rockville clusterVI AFS043930 B.thuringiensis AFS043930 Plant, Oats (2014) USA, North Carolina unclustered AFS070860 B.cereus AFS070860 Plant, Soybean core (2014) USA, Iowa clusterIV F2404B/79 B.cereus F2404B/79 (1979) [diarrheal food poisoning outbreak] clusterII I7 B.mycoides I7 Soil, quaking grass (Briza maxima) undisturbed soil (2016) Israel, Ramat HaNadiv clusterVI MOD1Bc198 B.cereus MOD1 Bc198 Human, Baby Wipes (2016) USA, Maryland clusterIII FSLJ3-0123 B.cereus FSL J3-0123 Dairy products, pasteurized milk (2012) USA clusterVI CH23 B.cytotoxicus CH 23 Food, Mashed potatoes (2015) Switzerland clusterVII MOD1Bc213 B.cereus MOD1 Bc213 Human, Baby Wipes (2016) USA, Maryland clusterIII MOD1Bc138 B.cereus MOD1 Bc138 Food, Dietary Supplements (2015) USA, Maryland clusterIII AFS005083 B.thuringiensis AFS005083 Plant, leaf (2014) USA, North Carolina clusterIV MOD1Bc204 B.cereus MOD1 Bc204 Human, Baby Wipes (2016) USA, Maryland clusterIII AFS003503 B.pseudomycoides AFS003503 Plant, Corn grain bin dust (2014) USA, Iowa unclustered AFS027605 B.anthracis AFS027605 Plant, Soybean core (2014) USA, Iowa clusterII AFS098506 B.thuringiensis AFS098506 Plant, Corn root (2014) USA, Iowa clusterIV BIOML-A1 B.cereus BIOML-A1 Human, fecal material (2015) USA, Boston clusterIII AFS016553 B.toyonensis AFS016553 Plant, Weed plant (2014) USA, Indiana clusterV AFS031232 B.cereus AFS031232 (2014) USA, North Carolina clusterII FSLK6-0267 B.cereus FSL K6-0267 Dairy products, Laboratory Heat Treated Raw Milk (2012) USA, New York clusterVI AFS003709 B.toyonensis AFS003709 Plant, Soybean core (2014) USA, Iowa clusterV T07030 B.thuringiensis aizawai T07030 clusterIV F528/94 B.cereus F528/94 Food, Chinese restaurant beef and chow mein and rice (1994) [diarrheal food poisoning outbreak] UK clusterII ANSES101 B.anthracis ANSES101 clusterIII Ba-7673/89-Geo B.anthracis Ba-7673/89-Geo Soil (1989) Georgia clusterIII AFS042307 B.cereus AFS042307 Plant, core (2014) USA, North Carolina clusterIV 16-00195 B.cereus 16-00195 clusterIII BAG3X2-2 B.c_group BAG3X2-2 Soil USA, Massachusetts, Boston clusterIV B4087 B.cereus B4087 Food, pea soup (2012) Netherlands clusterIII AFS091268 B.toyonensis AFS091268 Plant, Corn root (2014) USA, Ohio clusterV Sen2Col2 B.anthracis Sen2Col2 Senegal clusterIII VD078 B.c_group VD078 Soil Greenland clusterVI #17 B.cereus #17 Animal, Mouse microbiota clusterIV AFS075012 B.cereus AFS075012 Plant, Corn core (2014) USA, North Carolina clusterIV HD977 B.thuringiensis yunnanensis HD977 (BGSC4AM1, T20001) Animal, Insect, Oriental Leafworm Moth/Cluster caterpillar/Cotton leafworm/Tobacco cutworm/Tobacco caterpillar/Tropical armyworm (Spodoptera litura/Prodenia litura) China clusterIV AFS033477 B.toyonensis AFS033477 Plant, Corn core (2014) USA, North Carolina clusterV WSBC10035 B.cereus WSBC10035 Dairy products, pasteurized milk (1993) Germany clusterIII h16 B.thuringiensis indiana or dakota h16 clusterIV MROC2 B.cereus MROC2 Animal, Chicken/Red junglefowl (Gallus gallus) faeces/stools (2010) USA, California, Fresno County unclustered PFYN01#2 B.albus PFYN01#2 Soil (2017) USA, Texas, Galveston, East Beach clusterIV 905 B.cereus 905 Soil or plant [wheat (Triticum) rhizosphere (1985)] China, Beijing clusterIV AFS057502 B.cereus AFS057502 Plant, core (2014) USA, North Carolina unclustered RIVMBC126#1 B.cereus RIVMBC126 (RIVMBC126#1) Human, faeces/stools (1999) [diarrheal food poisoning; two complete genomes sequenced for this strain with different MLST sequences; strain sequenced by INRA-MIG, Unit MIG (Mathematique, Informatique et Genome), Jouy en Josas, France; sequences conflicting with isolate RIVMBC126#2] Netherlands clusterII AFS070964 B.cereus AFS070964 Plant, core (2014) USA, North Carolina clusterIV MOD1Bc122 B.cereus MOD1 Bc122 Food, Paprika (2015) USA, Maryland clusterIII AFS075487 B.thuringiensis AFS075487 Plant, Core Other Plant (2014) USA, North Carolina clusterIV SJ-S21 B.cereus SJ-S21 Human USA, Tennessee, Memphis clusterIV A0463 B.anthracis LSU463 (K5135, A0463, PAK-1) Animal, sheep (1978) [reported as pXO1+/pXO2+ but no pXO2 sequence in genome] Pakistan clusterIII AFS052400 B.cereus AFS052400 Plant, Corn core (2014) USA, Illinois clusterIV B4147 B.cereus B4147 Food, cereals, cereal products, (fermented) breads, pasta and pastries (2012) Netherlands clusterII AFS061996 B.cereus AFS061996 (2014) USA, North Carolina clusterIII AFS027918 B.wiedmannii AFS027918 Plant, Soybean core (2014) USA, Iowa clusterII AFS048418 B.cereus AFS048418 Soil (2014) USA, New York clusterVI K8215 B.anthracis K8215 (ZB80, A0489) [pXO1+/pXO2+] Argentina clusterIII MOD1Bc92 B.cereus MOD1 Bc92 Food, Whole Black Pepper (2015) USA, Maryland clusterIV HZBCE-08 B.cereus HZBCE-08 Food, Fried fish (2015) China, Hangzhou clusterIII 44-NIAH B.anthracis 44-NIAH [pXO1+/pXO2+] clusterIII AFS034541 B.cereus AFS034541 Plant, core (2014) USA, North Carolina clusterIV AFS071554 B.cereus AFS071554 (2014) USA, North Carolina clusterII Mn5 B.paranthracis type strain Mn5 (MCCC1A00395, KCTC33714, LMG28873) Other, sediments (2003) Pacific Ocean clusterIII ADRIAI21 B.weihenstephanensis ADRIA I21 (INRA I21) (1991) France clusterVI I32 B.cereus I32 Plant, Grass (2017) Israel, Ramat HaNadiv unclustered AFS061148 B.cereus AFS061148 Plant, Weed core (2014) USA, North Carolina clusterIV AFS029987 B.anthracis AFS029987 Plant, tree leaf (2014) USA, North Carolina clusterIII AFS071044 B.cereus AFS071044 Plant, Soybean core (2014) USA, Iowa clusterIV RIVMBC90 B.cereus RIVMBC90 (PAL5) Human, faeces/stools (1999) [diarrheal food poisoning outbreak] Netherlands clusterIII NVH0075/95 B.cereus NVH0075-95 (NVH0075/95) Food, stew with vegetables, food poisoning (1995) (1995) [diarrheal food poisoning outbreak] Norway clusterIII AFS084669 B.weihenstephanensis AFS084669 Soil (2014) USA, New York clusterVI FORC021 B.cereus FORC021 Other, Knife South Korea, Ulsan clusterIV DSM626 B.cereus DSM626 (1966) USA, Illinois clusterIV AFS097327 B.cereus AFS097327 Plant, Corn core (2014) USA, North Carolina clusterIV CITVM-11.1 B.cereus CITVM-11.1 Soil (2014) Argentina, Cordoba, Oncativo unclustered m401 B.thuringiensis m401 Food, honey (2001) Argentina, Pigue clusterIV AFS086269 B.toyonensis AFS086269 Plant, Corn core (2014) USA, Illinois clusterV AFS071894 B.cereus AFS071894 Plant, core (2014) USA, North Carolina clusterVI CC-1 B.cereus CC-1 Other, marine sediments (2015) China, Bo Hai, Liaodong Bay, Panjin clusterIII AFS076343 B.pseudomycoides AFS076343 Plant, Soybean core (2014) USA, Iowa unclustered BMB171 B.thuringiensis kurstaki BMB171 (BGSC4XX6) Other, acrystalliferous mutant derived from B.thuringiensis kurstaki strain YBT-1463 cured of the insecticidal toxin plasmid at Huazhong Agricultural University China, Wuhan clusterIV AFS067272 B.cereus AFS067272 Plant, Weed plant (2014) USA, North Carolina unclustered BAG2O-3 B.c_group BAG2O-3 Soil USA, Massachusetts, Boston clusterII AFS000175 B.cereus AFS000175 Plant, Soybean core (2014) USA, Iowa clusterIV MOD1Bc12 B.cereus MOD1 Bc12 Other, Powdered Infant Formula (2015) USA, Maryland clusterIII AFS024089 B.cereus AFS024089 Plant, core (2014) USA, North Carolina clusterVI BGSC4V1 B.thuringiensis tohokuensis BGSC4V1 Animal, Insect, silkworm (Bombyx mori) (1981) Japan clusterIV AFS054178 B.cereus AFS054178 Plant, Corn core (2014) USA, North Carolina unclustered BtAlHakam B.thuringiensis Al Hakam (BtAlHakam) Other, suspected bioweapons facility Iraq clusterIII AFS057097 B.cereus AFS057097 Plant, Corn core (2014) USA, North Carolina clusterIV NMSL88 B.wiedmannii NMSL88 Plant, Asparagus roots (2005) China, Tibet, Nyingchi clusterII MOD1Bc183 B.cereus MOD1 Bc183 Human, Baby Wipes (2016) USA, Maryland clusterIII AFS097325 B.thuringiensis AFS097325 Plant, core (2014) USA, North Carolina clusterIV BGSC4BF1 B.thuringiensis londrina BGSC4BF1 Germany clusterIV AFS018179 B.thuringiensis AFS018179 Plant, Corn grain bin dust (2013) USA, Iowa clusterIV BDRD-ST26 B.cereus BDRD-ST26 [Biological Defense Research Directorate (BDRD)] USA, Maryland, Rockville clusterIII AFS073833 B.cereus AFS073833 Plant, Corn core (2014) USA, North Carolina unclustered AFS039118 B.pseudomycoides AFS039118 Plant, Corn leaf (2014) USA, Indiana clusterI AFS054059 B.thuringiensis AFS054059 Plant, Corn core (2014) USA, Illinois clusterIV AFS087654 B.cereus AFS087654 Plant, Corn core (2014) USA, North Carolina clusterIV AFS002659 B.wiedmannii AFS002659 Soil (2014) USA, New York clusterII MOD1Bc64 B.cereus MOD1 Bc64 Human, Baby Wipes (2016) USA, Maryland clusterIII AFS064200 B.cereus AFS064200 Soil (2014) USA, New York clusterIV MOD1Bc185 B.cereus MOD1 Bc185 Human, Baby Wipes (2016) USA, Maryland clusterIII MOD1Bc63 B.cereus MOD1 Bc63 Human, Baby Wipes (2016) USA, Maryland clusterIII FORC086 B.cereus FORC 086 Food, chives (2016) South Korea, Seoul clusterIV AFS045501 B.wiedmannii AFS045501 Soil (2014) USA, New York clusterII AFS074395 B.cereus AFS074395 Plant, tree leaf (2014) USA, North Carolina unclustered BDRD-Cer4 B.cereus BDRD-Cer4 [Biological Defense Research Directorate (BDRD)] USA, Maryland, Rockville clusterIV AFS024024 B.wiedmannii AFS024024 Plant, Corn core (2014) USA, Illinois clusterII E33L B.cereus E33L (Zebra Killer) Animal, Carcass of dead zebra (1996) [two complete genomes sequenced for this strain with identical MLST sequences] Namibia, Etosha National Park clusterIII AFS098222 B.wiedmannii AFS098222 Plant, Soybean leaf (2014) USA, Minnesota clusterII AFS078211 B.cereus AFS078211 Plant, Corn core (2014) USA, North Carolina clusterIV MOD1Bc20 B.cereus MOD1 Bc20 Food, Paprika (2015) USA, Maryland clusterIII AFS055002 B.thuringiensis AFS055002 Plant, Corn core (2014) USA, Illinois clusterIV AFS056801 B.pseudomycoides AFS056801 Soil (2014) USA, Iowa unclustered AFS041525 B.thuringiensis AFS041525 Plant, core (2014) USA, North Carolina clusterIV MOD1Bc220 B.cereus MOD1 Bc220 Food, food product (2016) USA, Maryland clusterIII BGSC4AU1 B.thuringiensis higo T44001 (BGSC4AU1, 92-KU-137-4) Animal, Insect, litter of silkworm (Bombyx mori) Japan unclustered VD118 B.c_group VD118 Soil Guadeloupe clusterVI K0021 B.anthracis K0021 Animal, Sheep (1995) Italy clusterIII AFS027869 B.cereus AFS027869 Plant, Corn core (2014) USA, Illinois unclustered AFS067617 B.cereus AFS067617 Plant, Soybean core (2014) USA, Iowa unclustered MOD1Bc210 B.cereus MOD1 Bc210 Human, Baby Wipes (2016) USA, Maryland clusterIII SJ-S29 B.cereus SJ-S29 Human USA, Tennessee, Memphis clusterIV AFS063234 B.cereus AFS063234 Plant, Corn core (2014) USA, North Carolina clusterIV AFS022719 B.pseudomycoides AFS022719 Plant, Corn root (2014) USA, Iowa unclustered AFS015413 B.thuringiensis AFS015413 Plant, Corn grain bin dust (2014) USA, Iowa clusterIV AFS066501 B.cereus AFS066501 Food, Mushroom (2013) USA, Iowa clusterIV AFS018713 B.wiedmannii AFS018713 Plant, Corn (2014) USA, Iowa clusterII AFS029941 B.anthracis AFS029941 Plant, Corn plant (2014) USA, North Carolina clusterIII AFS086766 B.cereus AFS086766 (2014) USA, North Carolina clusterII AFS044634 B.toyonensis AFS044634 Plant, Soybean root (2013) USA, Missouri clusterV ach14 B.cereus ach14 clusterIV MOD1Bc191 B.cereus MOD1 Bc191 Human, Baby Wipes (2016) USA, Maryland clusterIII AFS075467 B.cereus AFS075467 Plant, Corn core (2014) USA, North Carolina clusterIV QHF158 B.mycoides QHF158 Soil (2014) China, Hainan, Qiongzhong county, Limushan National Forest Park clusterVI A22 B.cereus A22 Plant, coffee root (2018) Vietnam unclustered Kafkas-100 B.anthracis Kafkas-100 Soil (2009) Turkey, Digor clusterIII EC18 B.mycoides EC18 Soil (2016) Netherlands clusterVI AFS081374 B.pseudomycoides AFS081374 Plant, Corn root (2014) USA, Iowa unclustered 219298 B.mycoides 219298 (BA0098) clusterI AFS045876 B.thuringiensis AFS045876 Plant, core (2014) USA, North Carolina clusterIV HD600 B.thuringiensis morrisoni HD600 Animal, Insect, silkworm (2007) Japan clusterIV AFS053994 B.thuringiensis AFS053994 Plant, Soybean core (2014) USA, Iowa clusterIV HD1#2 B.thuringiensis kurstaki HD1 (HD1#2) Animal, Insect, Pink Bollworm (Pectinophora gossypiella) (1970) [strain sequenced by State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, Hubei, China; MLST data conflicting with isolates BGSC4D1, ATCC33679, HD1#1, and HD1#3; three complete genomes sequenced for this strain: identical MLST sequences between isolates HD1#1 and HD1#3 and different sequences in isolate HD1#2] USA clusterIV AFS056211 B.wiedmannii AFS056211 Plant, Soybean core (2014) USA, Iowa clusterII GOE6#1 B.thuringiensis GOE6#1 Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014) Germany, Goettingen clusterII BR37 B.thuringiensis BR37 Plant, stored grains (2009) [two complete genomes sequenced for this strain with identical MLST sequences] Brazil, Sertanopolis clusterIV AFS090123 B.cereus AFS090123 Plant, Corn plant (2014) USA, North Carolina clusterIV DE0280 B.thuringiensis DE0280 clusterIV AFS077416 B.cereus AFS077416 Plant, Weed plant (2014) USA, North Carolina unclustered AFS030086 B.cereus AFS030086 Soil (2014) USA, New York clusterVI AFS059543 B.toyonensis AFS059543 Plant, Corn (2014) USA, Iowa clusterV AFS066485 B.thuringiensis AFS066485 Food, Mushroom (2013) USA, Iowa clusterIV Pasteur B.anthracis Pasteur Animal, cat [pXO1-/pXO2+] clusterIII AFS056399 B.cereus AFS056399 Plant, Soybean core (2014) USA, Iowa clusterIV INRABc05-F1 B.cereus INRA Bc05-F1 clusterII AFS021466 B.cereus AFS021466 Plant, Soybean core (2014) USA, Iowa clusterIV AFS003761 B.anthracis AFS003761 Plant, Corn core (2014) USA, North Carolina clusterIII AFS028249 B.toyonensis AFS028249 Plant, Soybean core (2014) USA, Iowa clusterV Pollino B.anthracis Pollino Animal, cattle (bovine) carcass (2014) [from a bovine anthrax-burial site; pXO1+/pXO2+] Italy, Pollino National Park, Basilicata clusterIII UR-1 B.anthracis UR-1 Human, blood (2012) [from a german heroin user; fatal case of injectional anthrax; pXO1+/pXO2+] Germany, Bavaria clusterIII PR05 B.anthracis PR05 USA clusterIII AFS015248 B.anthracis AFS015248 (2014) USA, North Carolina clusterIII AFS020704 B.cereus AFS020704 Plant, Corn core (2014) USA, North Carolina unclustered AFS093276 B.cereus AFS093276 Plant, core (2014) USA, North Carolina clusterIV AFS041580 B.anthracis AFS041580 Plant, core (2014) USA, North Carolina clusterIII Carbosap B.anthracis Carbosap [attenuated, toxigenic, capsulated strain; shows significant attenuation of virulence; used in Italy as a live spore vaccine for cattle and sheep; pXO1+/pXO2+; two complete genomes sequenced for this strain with identical MLST sequences between] Somalia, Asmara, Institute Vacci nogeno or Italy, Rome clusterIII T69001 B.thuringiensis pahangi T69001 Malaysia clusterIV MOD1Bc113 B.cereus MOD1 Bc113 Other, Powdered Infant Formula (2015) USA, Maryland clusterIII AFS032503 B.wiedmannii AFS032503 Soil (2014) USA, New York clusterII NBIN-866 B.thuringiensis NBIN-866 Soil China, Hubei Province clusterIV VDM019 B.c_group VDM019 Soil Greenland clusterVI K4834 B.anthracis K4834 Animal, cattle (Bovine) (1997) Australia clusterIII AFS063645 B.cereus AFS063645 Plant, Corn core (2014) USA, North Carolina clusterIV AFS026312 B.cereus AFS026312 Soil (2014) USA, New York clusterII AFS040984 B.cereus AFS040984 Plant, Corn core (2014) USA, Illinois unclustered AFS020694 B.wiedmannii AFS020694 Plant, Soybean core (2014) USA, Iowa clusterII AFS055421 B.thuringiensis AFS055421 Plant, Corn core (2014) USA, Illinois clusterIV ANSES99-100 B.anthracis ANSES99-100 (99-100) Animal, cattle (bovine) (1999) France, Nievre clusterIII AFS006440 B.wiedmannii AFS006440 Plant, Soybean core (2014) USA, Iowa clusterII AFS066156 B.wiedmannii AFS066156 Plant, core (2014) USA, North Carolina clusterII MGYG-HGUT-02283 B.cereus MGYG-HGUT-02283 clusterIII 55-VNIIVViM B.anthracis 55-VNIIVViM Other, Commercial vial (2014) Georgia, Tbilisi clusterIII AFS019758 B.thuringiensis AFS019758 Plant, Soybean core (2014) USA, Iowa clusterIV AFS025510 B.thuringiensis AFS025510 Soil (2014) USA, Iowa clusterIV DE0030 B.thuringiensis israelensis DE0030 clusterIV ATCC14579#1 B.cereus type strain ATCC14579 (AH923, BGSC6A5, KB001, KCTC3624, NCTC2599, ATCC14579#1) Other, Farm, cow-shed air (1916) [strain sequenced by INRA, Genetique Microbienne, Jouy en Josas, France; MLST data conflicting with isolates ATCC14579#2 and ATCC14579#3; three complete genomes sequenced for this strain: identical MLST sequences between isolates ATCC14579#2 and ATCC14579#3 and different sequences in isolate ATCC14579#1] USA clusterIV MOD1Bc179 B.cereus MOD1 Bc179 Human, Baby Wipes (2016) USA, Maryland clusterIII Sen3 B.anthracis Sen3 Senegal clusterIII London499 B.anthracis London 499 Animal hide (2006) UK, London clusterIII BGSC6E1 B.cereus BGSC6E1 (AH263, GP7) [produces chitinase] clusterIII AFS011058 B.cereus AFS011058 Plant, Corn plant (2014) USA, North Carolina clusterIV IS075 B.c_group IS075 Animal, Mammals Poland clusterIII AFS018489 B.cereus AFS018489 Plant, Corn core (2014) USA, North Carolina clusterIV AFS010456 B.cereus AFS010456 Soil (2014) USA, New York clusterVI AFS027394 B.wiedmannii AFS027394 Plant, Soybean leaf (2014) USA, Minnesota clusterII AFS002224 B.cereus AFS002224 Soil (2014) USA, Iowa clusterVI BGSC4AK1 B.thuringiensis leesis BGSC4AK1 (1994) South Korea clusterIV INRAZB5-J B.cereus INRA ZB5-J clusterII BGSC4BT1#2 B.thuringiensis rongseni BGSC4BT1 (T56001, Scg04-02, BGSC4BT1#2) [two complete genomes sequenced for this strain with different MLST sequences; both genomes sequenced by State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, Hubei, China; sequences conflicting with isolate BGSC4BT1#1] China clusterIV TS2 B.cereus TS2 Other, Saltern sediment (2014) India, Tamil Nadu, Tuticorin (Thoothukudi) clusterIII T414 B.thuringiensis T414 Soil (2005) India, Tamil Nadu unclustered K3974 B.anthracis K3974 (1995) Slovakia clusterIII MYb220 B.cereus MYb220 Soil, compost Germany, Roxel clusterIII 1230 B.thuringiensis 1230 USA, Nebraska clusterIV VDM062 B.c_group VDM062 Soil UK, Scotland clusterVI AFS097474 B.cereus AFS097474 Plant, Weed leaf (2014) USA, Indiana clusterIV MC118 B.weihenstephanensis MC118 Soil, mud [emetic toxin/cereulide producer] Denmark clusterVI AFS081508 B.cereus AFS081508 Plant, core (2014) USA, North Carolina clusterVI AFS065951 B.toyonensis AFS065951 Plant, Corn core (2014) USA, Illinois clusterV B4118 B.cereus B4118 Food (2013) Netherlands clusterIV AFS082630 B.toyonensis AFS082630 Plant, Soybean leaf (2014) USA, Iowa clusterV AFS044532 B.cereus AFS044532 Plant, Corn root (2014) USA, Iowa clusterIV ANSES08-8_20 B.anthracis ANSES08-8_20 (08-8_20) Animal, cattle (bovine) (2008) France, Doubs clusterIII AFS050653 B.cereus AFS050653 Plant, Soybean core (2014) USA, Iowa unclustered SJ1 B.cereus SJ1 Other, chromium-contaminated wastewater of a metal electroplating factory [chromate-resistant and reducing isolate] China, Guangdong clusterIII INRA5 B.weihenstephanensis INRA5 clusterVI AFS098856 B.pseudomycoides AFS098856 Soil (2014) USA, New York clusterI T07153 B.thuringiensis aizawai T07153 clusterIV MOD1Bc234 B.cereus MOD1 Bc234 Human, faeces/stools (2016) USA, Maryland clusterIII AFS036521 B.wiedmannii AFS036521 Plant, Tomato plant (2014) USA, North Carolina clusterII A0174 B.anthracis LSU174 (K1979, A0174, 74-412C-8) Animal, cattle (bovine) (1974) [pXO1+/pXO2-] Canada clusterIII AFS043555 B.thuringiensis AFS043555 Soil (2014) USA, Iowa clusterIV AH1134 B.cereus BC006 (AH1134) Human, eye [pediatric endophthalmitis case] USA, Oklahoma clusterIV AFS053744 B.thuringiensis AFS053744 Soil (2014) USA, New York clusterIV A0193 B.anthracis LSU193 (K1256, A0193, 96-10355) Animal, cattle (cow) (1996) [pXO1+/pXO2+] USA, South Dakota clusterIII LA2007 B.cereus LA2007 Human, blood and BAL (2007) USA, Louisiana, Galliano clusterIII MYb212 B.cereus MYb212 Soil, compost Germany, Roxel clusterIII AFS031162 B.toyonensis AFS031162 Plant, Corn core (2014) USA, Illinois clusterV AFS092859 B.anthracis AFS092859 Plant, core (2014) USA, North Carolina clusterIII DE0336 B.nitratireducens DE0336 clusterVI AFS079395 B.cereus AFS079395 Plant, core (2014) USA, North Carolina clusterVI AFS086955 B.cereus AFS086955 Soil (2014) USA, New York clusterVI AFS010764 B.wiedmannii AFS010764 Plant, Soybean leaf (2014) USA, Minnesota clusterII AFS099621 B.cereus AFS099621 Plant, Corn core (2014) USA, North Carolina unclustered Larissa B.anthracis Larissa Animal, sheep (Ovis) (2012) Greece clusterIII AFS042863 B.cereus AFS042863 Plant, Corn core (2014) USA, North Carolina clusterIV AFS095498 B.cereus AFS095498 Plant, Corn core (2014) USA, North Carolina clusterIV AK47 B.thuringiensis AK47 Soil (2010) India, Odisha unclustered GOE5#1 B.thuringiensis GOE5#1 Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014) Germany, Goettingen clusterV AFS044547 B.cereus AFS044547 Soil (2014) USA, Iowa clusterIV Sterne34F2 B.anthracis Sterne 34F2 (ASC245) Animal, cattle (cow) (1937) [Animal vaccine strain; pXO1+/pXO2-; two complete genomes sequenced for this strain with identical MLST sequences] South Africa clusterIII AFS068816 B.pseudomycoides AFS068816 Soil (2014) USA, Iowa unclustered AFS050593 B.toyonensis AFS050593 Plant, Corn core (2014) USA, Illinois clusterV AFS040108 B.cereus AFS040108 Plant, Oats plant (2014) USA, North Carolina clusterII BAG6X1-2 B.c_group BAG6X1-2 Soil USA, Massachusetts, Boston clusterVI AFS056690 B.pseudomycoides AFS056690 Soil (2014) USA, Iowa unclustered MOD1Bc217 B.cereus MOD1 Bc217 Human, Baby Wipes (2016) USA, Maryland clusterIII AFS001542 B.cereus AFS001542 Plant, Corn core (2014) USA, North Carolina clusterIV KPR-7A B.cereus KPR-7A clusterII A1 B.cereus A1 Other, sludge of an anaerobic digestion reactor (2011) [efficient starch-utilizing producer of hydrogen] China, Beijing clusterIV AFS083341 B.cereus AFS083341 Soil (2014) USA, New York clusterVI F837/76 B.cereus F837/76 (AH188, KBBI3, DSM4222) Human, wound (1976) [efficient diarrheal enterotoxin producer from prostate operation wound infection] UK clusterIII B4120 B.cereus B4120 Food (2013) Netherlands clusterIV YWC2-8 B.thuringiensis YWC2-8 Soil (2007) China, Hailuo Glacier virgin forest, Sichuan basin unclustered AFS029679 B.cereus AFS029679 Plant, Corn core (2014) USA, North Carolina clusterIV AFS024178 B.pseudomycoides AFS024178 Soil (2014) USA, Iowa unclustered 2000031008 B.anthracis 2000031008 USA, Alabama clusterIII AFS028424 B.cereus AFS028424 Plant, Corn core (2014) USA, North Carolina clusterIV AFS042788 B.pseudomycoides AFS042788 Soil (2014) USA, Iowa clusterI F95/8201 B.cereus 95/8201 (F95/8201) Human, endocarditis; Prince Charles Hospital (1995) UK, Wales, Merthyr Tydfil clusterIII AFS033276 B.cereus AFS033276 Plant, tree leaf (2014) USA, North Carolina clusterIV MOD1Bc85 B.cereus MOD1 Bc85 Food, Ground Black Pepper (2015) USA, Maryland clusterIV AFS017211 B.cereus AFS017211 Plant, Soybean core (2014) USA, Iowa clusterIV K1 B.anthracis K1 Soil (2014) Namibia, Etosha National Park clusterIII AFS022169 B.cereus AFS022169 Plant, Corn core (2014) USA, North Carolina clusterIV AFS039774 B.thuringiensis AFS039774 Plant, Soybean core (2014) USA, Iowa clusterIV AFS081123 B.wiedmannii AFS081123 Plant, Corn core (2014) USA, Illinois clusterII AFS042804 B.thuringiensis AFS042804 Plant, Soybean leaf (2014) USA, Minnesota clusterIV PE8-15 B.mycoides PE8-15 Animal, marine sponge (Spongia sp.) (2013) South Africa, Algoa Bay, White Sands Reef, Indian Ocean, Port Elizabeth clusterVI AFS009734 B.cereus AFS009734 Plant, Weed core (2014) USA, North Carolina clusterIV ATCC14579#3 B.cereus type strain ATCC14579 (AH923, BGSC6A5, KB001, KCTC3624, NCTC2599, ATCC14579#3) [Farm, cow-shed air (1916) [strain sequenced by WTSI, Pathogen Informatics, Wellcome Trust Sanger Institute, UK; MLST data conflicting with isolate ATCC14579#1; three complete genomes sequenced for this strain: identical MLST sequences between isolates ATCC14579#2 and ATCC14579#3 and different sequences in isolate ATCC14579#1]] clusterIV HBL-AI B.cereus HBL-AI Other, bacteria air in Laboratory (2016) China, Baoding clusterIV 16-00174 B.cereus 16-00174 clusterIII AFS057764 B.anthracis AFS057764 Plant, core (2014) USA, North Carolina clusterIII AFS009906 B.toyonensis AFS009906 Plant, Corn core (2014) USA, Illinois clusterV B-2012 B.thuringiensis B-2012 Other, Sediments (2002) Pacific Ocean clusterIV 7/27/S B.cereus 7/27/S Human, faeces/stools [human diarrhea] clusterIII AFS063640 B.thuringiensis AFS063640 Plant, Corn core (2014) USA, Illinois clusterIV I161 B.cereus I161 Plant, Grass (2017) Israel, Karie Deshe clusterIV BAG1O-3 B.c_group BAG1O-3 Soil USA, Massachusetts, Boston clusterIV AFS052525 B.cereus AFS052525 Plant, Corn core (2014) USA, North Carolina unclustered DNG9 B.thuringiensis DNG9 Other, oil-contaminated slough (2013) Algeria, Baraki-Alger clusterIV AFS059914 B.thuringiensis AFS059914 Plant, Corn core (2014) USA, Illinois clusterIV AFS067803 B.cereus AFS067803 Plant, Corn leaf (2014) USA, Illinois unclustered AFS079345 B.cereus AFS079345 Other, excrement (2014) USA, Iowa clusterII FORC048 B.cereus FORC 048 Plant, Sesame leaf (2014) South Korea, Gwangju clusterIV DE0606 B.thuringiensis DE0606 clusterIV NMSW16 B.wiedmannii NMSW16 Soil (2005) China, Tibet, Nyingchi clusterII AFS022655 B.anthracis AFS022655 Plant, Corn core (2014) USA, North Carolina clusterIII AFS071440 B.cereus AFS071440 Plant, Corn core (2014) USA, North Carolina clusterIV AFS080033 B.toyonensis AFS080033 Plant, Soybean leaf (2014) USA, Iowa clusterV AFS082247 B.thuringiensis AFS082247 Plant, Corn leaf (2014) USA, Illinois clusterIV AFS067541 B.toyonensis AFS067541 Plant, Soybean leaf (2014) USA, Minnesota clusterV SJ-S24 B.cereus SJ-S24 Human USA, Tennessee, Memphis clusterIII AFS065668 B.pseudomycoides AFS065668 Soil (2014) USA, Iowa unclustered B4079 B.cereus B4079 Food (2013) Netherlands clusterIII 4599 B.anthracis Heroin Ba4599 (Ba4599) Human, Scottish heroin user (2009) UK, Scotland, Glasgow clusterIII N31 B.cereus N31 Other, Sediments (2002) China, South China Sea clusterIV AFS085674 B.cereus AFS085674 Plant, Corn core (2014) USA, North Carolina clusterIV AFS076772 B.thuringiensis AFS076772 Plant, core (2014) USA, North Carolina clusterIV DE0472 B.thuringiensis DE0472 unclustered C3-5-12 B.cereus C3-5-12 Animal, camel faeces/stools (2015) United Arab Emirates clusterIII NJ-W B.cereus NJ-W Soil (2014) China, Zhongshan mountain, Nanjing clusterIV AFS095575 B.cereus AFS095575 Plant, Corn core (2014) USA, Illinois unclustered NMTD81 B.thuringiensis NMTD81 Soil (2005) China, Tibet clusterIV AFS054043 B.cereus AFS054043 Plant, Corn root (2014) USA, Iowa clusterVI AFS030179 B.thuringiensis AFS030179 Plant, Corn root (2014) USA, Iowa clusterIV AFS003410 B.cereus AFS003410 Plant, Corn core (2014) USA, Illinois clusterIV E41 B.cereus E41 Other, salt lake (2016) Algeria, Ain Mlila-Oum El Bouaghi clusterIV AFS026252 B.thuringiensis AFS026252 Plant, Corn (2014) USA, Iowa clusterIV AFS062910 B.toyonensis AFS062910 Plant, Soybean core (2014) USA, Iowa clusterV H9401 B.anthracis H9401 Human, cutaneous anthrax patient [pXO1+/pXO2+] South Korea clusterIII AFS086892 B.cereus AFS086892 Plant, Soybean core (2014) USA, Iowa clusterIV AFS069985 B.wiedmannii AFS069985 Soil (2014) USA, New York clusterII CTC B.thuringiensis finitimus CTC Soil (1999) [two complete genomes sequenced for this strain with identical MLST sequences] China, Wuhan unclustered AFS055090 B.toyonensis AFS055090 Soil (2014) USA, New York clusterV AFS080164 B.cereus AFS080164 Plant, Corn core (2014) USA, North Carolina clusterIV AFS012367 B.pseudomycoides AFS012367 Plant, Soybean core (2014) USA, Iowa unclustered DE0177 B.thuringiensis DE0177 clusterIV 2000032975 B.anthracis 2000032975 (1966) clusterIII AFS031651 B.thuringiensis AFS031651 Animal, Insect, beetle (2013) USA, North Carolina clusterIV FDAARGOS341 B.anthracis FDAARGOS 341 Other, Colorado Serum Co., Anthrax Spore Vaccine (2015) clusterIII AFS034791 B.cereus AFS034791 Plant, Soybean leaf (2013) USA, Minnesota unclustered AFS009218 B.thuringiensis AFS009218 Plant, Corn core (2014) USA, North Carolina clusterIV FORC005 B.cereus FORC 005 Food, chicken cutlett (2014) South Korea, Inchon clusterIV GTC2926 B.cereus GTC2926 clusterVI AFS061928 B.cereus AFS061928 Plant, Corn core (2014) USA, North Carolina clusterIV AFS067605 B.thuringiensis AFS067605 Food, Mushroom (2013) USA, Iowa clusterIV AFS014678 B.cereus AFS014678 Soil (2014) USA, New York clusterII DE0141 B.thuringiensis DE0141 unclustered SJ-S19 B.cereus SJ-S19 Human USA, Tennessee, Memphis clusterIV AFS021943 B.wiedmannii AFS021943 Plant, Soybean leaf (2014) USA, Iowa clusterII AFS080060 B.wiedmannii AFS080060 Plant, Corn root (2014) USA, Iowa clusterII FSLH8-0485 B.cereus FSL H8-0485 Soil (2006) USA clusterVI AFS001368 B.toyonensis AFS001368 Plant, Soybean core (2014) USA, Iowa clusterV FSLH7-0353 B.wiedmannii FSL H7-0353 Food, finished ready-to-eat dairy food product (2005) USA, New York clusterII JCM15801 B.gaemokensis type strain JCM15801 (MCCC1A00707, BL3-6, KCTC13318) [Yellow Sea tidal flat sediment (2011) [two complete genomes sequenced for this strain with different MLST sequences and origins; strain sequenced by The Third Institute of Oceanography, State of Oceanic Administration (SOA), Xiamen, Fujian, China; sequences conflicting with isolate KCTC 13318]] clusterI 03BB108 B.cereus 03BB108 Other, dust in workspace associated with clinical case (isolate 03BR1283) (2003) [two complete genomes sequenced for this strain with identical MLST sequences] USA, Texas clusterIII AFS040054 B.cereus AFS040054 Plant, core (2014) USA, North Carolina unclustered CER057 B.weihenstephanensis CER057 Food, parsley [emetic toxin/cereulide producer toxin/cereulide producer] Belgium clusterVI NZAS02 B.cereus NZAS02 Food, pasteurized egg white (2015) New Zealand, Dunedin clusterII ATCC10987#1 B.cereus ATCC10987 (AH75, NRS248, 6A15, ATCC10987#1) Dairy products, Cheese (1930) Canada clusterIII MB.16 B.cereus MB.16 Food (2014) Germany, Munich clusterIII AFS025007 B.anthracis AFS025007 Plant, Corn core (2014) USA, North Carolina clusterIII AFS085794 B.cereus AFS085794 Plant, Corn leaf (2014) USA, Illinois unclustered AFS009709 B.pseudomycoides AFS009709 Plant, Soybean root (2014) USA, Iowa unclustered AFS018197 B.anthracis AFS018197 Plant, core (2014) USA, North Carolina clusterIII VD196 B.c_group VD196 Soil UAE, Dubai clusterIV MOD1Bc67 B.cereus MOD1 Bc67 Other, Powdered Infant Formula (2015) USA, Maryland clusterIII AFS017092 B.pseudomycoides AFS017092 Soil (2014) USA, New York unclustered AFS039661 B.cereus AFS039661 Soil (2014) USA, New York unclustered AFS028618 B.toyonensis AFS028618 Plant, Corn leaf (2014) USA, Illinois clusterV AFS052902 B.cereus AFS052902 Plant, core (2014) USA, North Carolina clusterIV AFS096149 B.wiedmannii AFS096149 Plant, Corn grain bin dust (2013) USA, Iowa clusterII AFS078111 B.toyonensis AFS078111 Plant, Soybean leaf (2014) USA, Minnesota clusterV I5 B.wiedmannii I5 Soil, quaking grass (Briza maxima) undisturbed soil (2016) Israel, Ramat HaNadiv clusterII AFS042343 B.cereus AFS042343 Plant, Corn grain bin dust (2013) USA, Iowa clusterII AFS072125 B.toyonensis AFS072125 Plant, Soybean leaf (2014) USA, Iowa clusterV AFS081469 B.cereus AFS081469 Plant, Corn core (2014) USA, Illinois clusterIV FSLE2-0214 B.mycoides FSL E2-0214 Food, finished RTE dairy food product (2014) USA clusterVI AFS093408 B.pseudomycoides AFS093408 Plant, leaf (2014) USA, Indiana unclustered AFS057001 B.wiedmannii AFS057001 Soil (2014) USA, New York clusterII BAG2O-2 B.c_group BAG2O-2 Soil USA, Massachusetts, Boston clusterV TIAC219 B.c_group TIAC219 Food clusterIV AFS090430 B.wiedmannii AFS090430 Plant, Corn grain bin dust (2013) USA, Iowa clusterII ANSES32 B.anthracis ANSES32 clusterIII C15#2 B.thuringiensis C15#2 Soil (2017) USA, Texas, Galveston, East Beach clusterIV AFS015207 B.wiedmannii AFS015207 Plant, Soybean core (2014) USA, Iowa clusterII P4-0-9 B.cereus P4-0-9 Other, environmental sample from landfill (2015) Hong Kong clusterIII AFS059931 B.thuringiensis AFS059931 Soil (2014) USA, North Carolina clusterIV AFS070947 B.cereus AFS070947 Plant, core (2014) USA, North Carolina clusterIV 95014 B.anthracis 95014 [pXO1+/pXO2-] clusterIII HuA2-4 B.c_group HuA2-4 Soil Belgium clusterVI AFS005023 B.thuringiensis AFS005023 (2014) USA, North Carolina clusterIV AFS086794 B.pseudomycoides AFS086794 Soil (2014) USA, Iowa unclustered AFS011906 B.wiedmannii AFS011906 Plant, core (2014) USA, North Carolina clusterII AFS092470 B.pseudomycoides AFS092470 Plant, Soybean core (2014) USA, Iowa unclustered AFS056099 B.cereus AFS056099 Plant, Soybean core (2014) USA, Iowa clusterIV CH38 B.cytotoxicus CH 38 Food, Mashed potatoes (2014) Switzerland clusterVII BGSC4AQ1 B.thuringiensis seoulensis BGSC4AQ1 (T35001) Soil South Korea clusterV AFS064234 B.wiedmannii AFS064234 Plant, Soybean core (2014) USA, Iowa clusterII AFS099341 B.thuringiensis AFS099341 Plant, Corn leaf (2014) USA, Illinois clusterIV AFS028766 B.pseudomycoides AFS028766 Plant, Corn plant (2014) USA, North Carolina clusterI UBA4171 B.cereus UBA4171 clusterIV AFS059526 B.thuringiensis AFS059526 Plant, Corn grain bin dust (2013) USA, Iowa clusterIV AFS049329 B.wiedmannii AFS049329 Plant, Soybean leaf (2014) USA, Minnesota clusterII AFS009420 B.toyonensis AFS009420 Plant, Soybean leaf (2014) USA, Minnesota clusterV GOE7#1 B.thuringiensis GOE7#1 Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014) Germany, Goettingen clusterV AFS060105 B.cereus AFS060105 Plant, Corn core (2014) USA, North Carolina clusterIV DE0161 B.thuringiensis DE0161 unclustered NVH0597/99 B.cereus NVH0597-99 (NVH0597/99) Food, spice mix (1999) [strain believed to be the cause of a diarrheal food poisoning outbreak] Norway clusterIII NRRLB-23150 B.thuringiensis higo NRRLB-23150 Animal, Insect, Culicidae (Mosquitoes) (2013) UK unclustered AFS045814 B.thuringiensis AFS045814 (2014) USA, North Carolina clusterIV AFS077312 B.cereus AFS077312 Plant, core (2014) USA, North Carolina clusterII TYU4 B.toyonensis TYU4 Plant, Japanese yew (Taxus cuspidata) (2015) South Korea unclustered Ames B.anthracis Ames Porton [pXO1-/pXO2-; Ames strain cured of the pXO1 and pXO2 plasmids at UK Defence Science and Technology Laboratory] UK, England, Porton Down clusterIII AFS077000 B.cereus AFS077000 Plant, Weed leaf (2014) USA, Indiana clusterIV RIT375 B.anthracis RIT375 Plant, Insulin plant/Spiral flag (Costus igneus) Internal Stem Tissue (2015) Puerto Rico clusterIII AFS098336 B.thuringiensis AFS098336 Plant, Soybean core (2014) USA, Iowa clusterIV AFS044880 B.cereus AFS044880 Plant, core (2014) USA, North Carolina clusterIV TD41 B.luti type strain TD41 (MCCC1A00359, KCTC33716, LMG28872) Other, sediments (2002) Pacific Ocean unclustered AFS073024 B.toyonensis AFS073024 Plant, Soybean leaf (2014) USA, Minnesota clusterV HZBCE-09 B.cereus HZBCE-09 Food, pork (2015) China, Hangzhou clusterIII T07183 B.thuringiensis aizawai T07183 clusterIV AFS002548 B.cereus AFS002548 Soil (2014) USA, Iowa clusterVI DE0208 B.mycoides DE0208 unclustered MOD1Bc55 B.cereus MOD1 Bc55 Plant, Sesame Seed (2015) USA, Maryland clusterIII BAG6O-2 B.c_group BAG6O-2 Soil USA, Massachusetts, Boston clusterVI A31 B.cereus A31 Plant, black pepper plant root (2018) Vietnam clusterIV AFS084126 B.pseudomycoides AFS084126 Soil (2014) USA, New York clusterI AFS088186 B.toyonensis AFS088186 Plant, Soybean root (2013) USA, Illinois clusterV NVH141/1/01 B.cereus NVH141/1-01 (V C53, NVH141/1/01) (2001) [diarrheal food poisoning outbreak] Norway clusterV I13 B.thuringiensis I13 clusterIV AFS002371 B.wiedmannii AFS002371 Plant, Weed leaf (2014) USA, Indiana clusterII BGSC4AS1 B.thuringiensis oswaldocruzi BGSC4AS1 (T38001, LFB855) Food, black pepper powder Brazil clusterIII MOD1Bc189 B.cereus MOD1 Bc189 Human, Baby Wipes (2016) USA, Maryland clusterIII AFS084412 B.cereus AFS084412 Plant, core (2014) USA, North Carolina clusterVI AFS015304 B.cereus AFS015304 Plant, core (2014) USA, North Carolina clusterIV TD42 B.proteolyticus type strain TD42 (MCCC1A00365, KCTC33715, LMG28870) Other, sediments (2002) Pacific Ocean clusterVI AFS040001 B.thuringiensis AFS040001 Plant, Corn root (2014) USA, Iowa clusterIV AFS081620 B.thuringiensis AFS081620 Plant, Soybean core (2014) USA, Iowa clusterIV AFS048598 B.cereus AFS048598 Plant, Corn core (2014) USA, North Carolina clusterIV DE0365 B.thuringiensis DE0365 clusterIV A24/TNBovineSokol B.anthracis A24/TN Bovine Sokol Animal, cattle (bovine) (Bos primigenius taurus) (1972) Slovakia clusterIII ET31 B.cereus ET31 Other, Glacier sediment (2010) Svalbard, Revvatnet basin, southern Spitsbergen clusterIV AH1272 B.cereus AH1272 Human, amniotic fluid; Reykjavik University Hospital (1999) [from the same hospital as isolates AH1270, AH1271, and AH1273] Iceland, Reykjavik clusterVI AFS023720 B.cereus AFS023720 Soil (2013) USA, North Carolina clusterIV AFS042632 B.cereus AFS042632 Plant, Corn core (2014) USA, Illinois clusterVI MOD1Bc224 B.cereus MOD1 Bc224 Food, food product (2016) USA, Maryland clusterIII AFS074367 B.pseudomycoides AFS074367 Soil (2014) USA, New York clusterI AFS010695 B.cereus AFS010695 Soil (2014) USA, North Carolina unclustered AFS097917 B.thuringiensis AFS097917 Plant, core (2014) USA, North Carolina clusterIV AFS048126 B.wiedmannii AFS048126 Plant, Corn root (2014) USA, Iowa clusterII AFS096642 B.cereus AFS096642 Plant, Corn core (2014) USA, North Carolina clusterIV GOE10 B.weihenstephanensis GOE10 Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014) Germany, Goettingen clusterVI AFS007868 B.cereus AFS007868 Plant, Soybean core (2014) USA, Iowa unclustered SCG04-02 B.thuringiensis SCG04-02 Soil (1992) China clusterIV AFS044825 B.anthracis AFS044825 Plant, core (2014) USA, North Carolina clusterIII AFS003338 B.cereus AFS003338 Plant, Corn (2014) USA, Iowa clusterIV AFS043413 B.cereus AFS043413 Soil (2014) USA, New York clusterIV AFS071863 B.cereus AFS071863 Plant, Weed core (2014) USA, North Carolina clusterIV YC-10 B.thuringiensis YC-10 (CCTCC M2010023) Plant, tobacco roots (2010) China, Hunan Province unclustered Sterne B.anthracis Sterne [pXO1+/pXO2-; two complete genomes sequenced for this strain with identical MLST sequences] USA clusterIII 16-00184 B.cereus 16-00184 clusterIV FCC41 B.wiedmannii biovar thuringiensis FCC41 Soil (2002) [renamed as B. wiedmannii bv. thuringiensis because it is related to B. wiedmannii by phylogenetic analysis of core genome but harbors Cry proteins in the parasporal body and cry gene-coding plasmids; Lazarte et al. 2018, Genome Biol. Evol. 10, 2823-2833] Argentina, Buenos Aires clusterII AFS000937 B.cereus AFS000937 Plant, Corn core (2014) USA, North Carolina clusterIV AFS083298 B.toyonensis AFS083298 Plant, Soybean core (2014) USA, Iowa clusterV AFS046747 B.cereus AFS046747 Plant, Corn core (2014) USA, North Carolina unclustered AFS075437 B.wiedmannii AFS075437 Other, excrement (2014) USA, Iowa clusterII 663 B.anthracis BA663 clusterIII AFS093397 B.cereus AFS093397 Plant, Soybean core (2014) USA, Iowa clusterIV AFS096926 B.cereus AFS096926 Plant, core (2014) USA, North Carolina clusterVI AFS009093 B.cereus AFS009093 Plant, Corn core (2014) USA, North Carolina unclustered MOD1Bc58 B.cereus MOD1 Bc58 Human, Baby Wipes (2016) USA, Maryland clusterIII BGSC4AV1 B.thuringiensis malayensis BGSC4AV1 Malaysia clusterV AFS048966 B.cereus AFS048966 Plant, core (2014) USA, North Carolina clusterIV F3175/03 B.cereus F3175/03 Human, faeces/stools (2004) [human diarrhea] clusterIV AFS074688 B.pseudomycoides AFS074688 Plant, Soybean leaf (2014) USA, Iowa unclustered AFS065770 B.cereus AFS065770 Plant, Weed core (2014) USA, North Carolina clusterIV YBT-032 B.thuringiensis darmstadiensis YBT-032 Soil China clusterIV AFS041274 B.toyonensis AFS041274 Plant, Soybean leaf (2014) USA, Iowa clusterV YGd22-03 B.thuringiensis YGd22-03 Soil (1992) China clusterIV A8 B.cereus A8 Plant, coffee root (2018) Vietnam clusterIV A1144 B.anthracis A1144 [pXO1+/pXO2+; shows mucoid colony morphology] Argentina clusterIII AFS029513 B.cereus AFS029513 Plant, Soybean core (2014) USA, Iowa clusterIV AFS053584 B.toyonensis AFS053584 Plant, Corn root (2014) USA, Iowa clusterV AFS048805 B.pseudomycoides AFS048805 Plant, Corn core (2014) USA, Illinois clusterI AFS055282 B.thuringiensis AFS055282 Plant, Corn leaf (2014) USA, Iowa clusterIV AFS070861 B.cereus AFS070861 Plant, core (2014) USA, North Carolina unclustered BGSC4BU1 B.thuringiensis pirenaica BGSC4BU1 Spain clusterIV AFS096476 B.toyonensis AFS096476 Plant, Soybean root (2013) USA, Illinois clusterV AFS034785 B.cereus AFS034785 Plant, core (2014) USA, North Carolina clusterVI AFS009197 B.wiedmannii AFS009197 Soil (2014) USA, New York clusterII AFS029767 B.thuringiensis AFS029767 Plant, Soybean leaf (2014) USA, Minnesota clusterIV BAG1X1-1 B.c_group BAG1X1-1 Soil USA, Massachusetts, Boston unclustered AFS041586 B.thuringiensis AFS041586 Plant, Grass core (2014) USA, Iowa clusterIV AFS007186 B.thuringiensis AFS007186 Plant, Corn leaf (2014) USA, Illinois clusterIV B4264 B.cereus B4264 (2002734361) Human, blood and pleural fluid (1969) [human fatal pneumonia] clusterIV Turkey32 B.anthracis Turkey32 Human, skin (1991) [pXO1+/pXO2+] Turkey, Yozgat clusterIII AFS035044 B.cereus AFS035044 Plant, core (2014) USA, North Carolina unclustered AFS054612 B.pseudomycoides AFS054612 Plant, Corn root (2014) USA, Iowa unclustered AFS027958 B.toyonensis AFS027958 Plant, Grass core (2014) USA, Iowa clusterV UBA5991 B.cereus UBA5991 clusterIV AFS027725 B.anthracis AFS027725 Plant, core (2014) USA, North Carolina clusterIII C1L B.cereus C1L Soil or plant, rhizosphere (2003) Taiwan, Taroko National Park, Hualien unclustered T07128 B.thuringiensis aizawai T07128 clusterIV AFS019518 B.thuringiensis AFS019518 Plant, Soybean core (2014) USA, Iowa clusterIV AFS060152 B.cereus AFS060152 Soil (2014) USA, New York clusterVI 20SD B.anthracis 20SD Animal, domestic sheep (Ovis aries) (2009) [from an anthrax outbreak; pXO1+/pXO2+] South Africa, Mpumalanga Province, Standerton area clusterIII AFS078322 B.wiedmannii AFS078322 Soil (2014) USA, New York clusterII DE0288 B.cereus DE0288 clusterIV AFS025854 B.thuringiensis AFS025854 Plant, Soybean core (2014) USA, Iowa clusterIV BAG6X1-1 B.c_group BAG6X1-1 Soil USA, Massachusetts, Boston clusterII AFS096960 B.thuringiensis AFS096960 Plant, Corn root (2014) USA, Iowa clusterIV AFS088704 B.cereus AFS088704 Plant, Corn core (2014) USA, North Carolina clusterIV AFS023984 B.toyonensis AFS023984 Plant, Soybean root (2014) USA, Iowa clusterV MS464a B.cereus MS464a Food, Mixed salad (2015) Germany, Kiel clusterIII c25 B.thuringiensis c25 Soil (2017) South Korea clusterIV AFS005901 B.cereus AFS005901 Plant, Soybean core (2014) USA, Iowa clusterIV AFS022598 B.pseudomycoides AFS022598 Plant, Soybean leaf (2014) USA, Iowa unclustered AFS033588 B.toyonensis AFS033588 Plant, Corn leaf (2014) USA, Illinois clusterV AFS034126 B.thuringiensis AFS034126 Plant, Corn core (2014) USA, Illinois clusterIV AFS071939 B.thuringiensis AFS071939 Plant, Weed core (2014) USA, North Carolina clusterIV AFS076260 B.thuringiensis AFS076260 Plant, Corn grain bin dust (2014) USA, Iowa clusterIV DE0388 B.cereus DE0388 clusterIV F4810/72 B.cereus F4810/72 (AH187, KBBI2, FHL4810, NCTC11143, DSM4312, SMR178) Human, vomit (1972) [emetic food poisoning outbreak; human vomiting; reference emetic toxin/cereulide producer] UK clusterIII AFS011084 B.thuringiensis AFS011084 Plant, Soybean root (2014) USA, Missouri clusterIV BGSC4AP1 B.thuringiensis fukuokaensis BGSC4AP1 (1989) Japan clusterIV A24 B.cereus A24 Plant, black pepper plant root (2018) Vietnam clusterIV AFS032918 B.toyonensis AFS032918 Plant, core (2014) USA, North Carolina clusterV AFS070416 B.cereus AFS070416 Plant, core (2014) USA, North Carolina clusterIV BAG4X12-1 B.c_group BAG4X12-1 Soil USA, Massachusetts, Boston unclustered AFS006340 B.cereus AFS006340 Plant, Soybean core (2014) USA, Iowa clusterIV AFS042148 B.toyonensis AFS042148 Plant, Corn grain bin dust (2013) USA, Iowa clusterV FN31 B.thuringiensis FN31 Other, Sediments (2002) Pacific Ocean clusterIV AFS034699 B.toyonensis AFS034699 Plant, Corn root (2014) USA, Iowa clusterV AFS052302 B.wiedmannii AFS052302 Plant, Soybean core (2014) USA, Iowa clusterII AFS012085 B.thuringiensis AFS012085 Plant, Corn root (2014) USA, Iowa clusterIV AFS078332 B.thuringiensis AFS078332 Plant, Weed plant (2014) USA, North Carolina clusterIV AFS087793 B.cereus AFS087793 Plant, Weed plant (2014) USA, North Carolina clusterIV AFS071406 B.cereus AFS071406 Soil (2014) USA, New York clusterVI AFS080155 B.thuringiensis AFS080155 Plant, Core Corn (2014) USA, North Carolina clusterIV AFS029029 B.cereus AFS029029 Plant, Corn (2014) USA, North Carolina clusterIV AFS052419 B.wiedmannii AFS052419 Soil (2014) USA, New York clusterII AFS049152 B.thuringiensis AFS049152 Plant, core (2014) USA, North Carolina clusterIV AFS052778 B.thuringiensis AFS052778 Soil (2014) USA, North Carolina clusterIV Vollum B.anthracis Vollum [this strain is used in research studies and is found in the UK, Spain, and Zimbabwe; pXO1+/pXO2+; two complete genomes sequenced for this strain with identical MLST sequences] clusterIII A0021 B.anthracis A0021 Animal, Hippopotamus (1997) Zambia, Western Province clusterIII AFS023479 B.cereus AFS023479 Plant, Corn root (2014) USA, Illinois unclustered SB13 B.mycoides SB13 Soil (2016) Netherlands clusterVI AFS087171 B.thuringiensis AFS087171 Plant, core (2014) USA, North Carolina clusterIV deltaSterne B.anthracis delta Sterne [pXO1-/pXO2-] clusterIII AFS070094 B.toyonensis AFS070094 Plant, Soybean leaf (2014) USA, Minnesota clusterV AFS043896 B.cereus AFS043896 Plant, Corn core (2014) USA, North Carolina clusterIV HD1#1 B.thuringiensis kurstaki HD1 (HD1#1) Soil (1970) [strain sequenced by University of Oklahoma Health Sciences Center, Oklahoma City, Oklahoma, USA; MLST data conflicting with isolates BGSC4D1, ATCC33679, and HD1#2; three complete genomes sequenced for this strain: identical MLST sequences between isolates HD1#1 and HD1#3 and different sequences in isolate HD1#2] USA unclustered AFS047230 B.toyonensis AFS047230 Plant, Soybean core (2014) USA, Iowa clusterV AFS067996 B.cereus AFS067996 Plant, Corn core (2014) USA, North Carolina clusterIV G9241#1 B.cereus G9241 (2000031673, B06_002, G9241#1) Human, sputum and blood (1994) [human pneumonia; carries pXO1 plasmid with anthrax virulence genes and produces a polysaccharide capsule; two complete genomes sequenced for this strain with identical MLST sequences] USA, Louisiana clusterIII AFS054343 B.thuringiensis AFS054343 Plant, Corn root (2014) USA, Illinois clusterIV FSLH8-0032 B.wiedmannii FSL H8-0032 Dairy food in process (2005) USA, New York clusterII AFS056055 B.toyonensis AFS056055 Plant, Soybean core (2014) USA, Iowa clusterV BrazilianVaccinal B.anthracis Brazilian Vaccinal Animal, cattle (bovine) (Bos taurus) Vaccine strain (2016) Brazil clusterIII CH13 B.cytotoxicus CH 13 Food, Mashed potatoes (2015) Switzerland clusterVII AFS093925 B.cereus AFS093925 Plant, Corn core (2014) USA, Illinois clusterIV ISP2954 B.c_group ISP2954 Food unclustered AFS012729 B.wiedmannii AFS012729 Plant, Soybean root (2014) USA, Minnesota clusterII MOD1Bc178 B.cereus MOD1 Bc178 Human, Baby Wipes (2016) USA, Maryland clusterIII AFS006766 B.cereus AFS006766 Plant, Weed leaf (2014) USA, Indiana clusterIV AFS002494 B.thuringiensis AFS002494 Plant, Corn root (2014) USA, Iowa clusterIV AFS083741 B.cereus AFS083741 Soil (2014) USA, North Carolina unclustered ANSES86 B.anthracis ANSES86 clusterIII HZBCE-02 B.cereus HZBCE-02 Human, stomach (2015) China, Hangzhou clusterIII AFS087824 B.cereus AFS087824 Plant, Soybean core (2014) USA, Iowa clusterIV BA1004 B.anthracis Ames BA1004 (2000) [pXO1+/pXO2+] USA, Texas clusterIII AFS022493 B.pseudomycoides AFS022493 Soil (2014) USA, Iowa clusterI AFS039950 B.cereus AFS039950 Soil (2014) USA, New York clusterIV BAG3O-1 B.c_group BAG3O-1 Soil USA, Massachusetts, Boston clusterII DSM12442 B.pseudomycoides type strain DSM12442 (NRRLB-617, WS3118, KCTC3862) Soil Ghana or Sweden or USA clusterI ATCC10792#3 B.thuringiensis thuringiensis type strain ATCC10792 (IMSNU12088, DSM2046, WS2734, AH1083, HD735, CIP53.137, KCTC3452, KCTC1034, BGSC4A11, ATCC10792#3) Animal, Insect, Mediterranean flour moth/mill moth (Ephestia kuhniella/Anagasta kuehniella) [three complete genomes sequenced for this strain with different sequences and origins; strain sequenced by Biological Defense Research Directorate (BDRD), Rockville, Maryland, USA; sequences conflicting with isolates ATCC10792#1 and ATCC10792#2] Israel clusterIV BGSC4AW1#1 B.thuringiensis andalousiensis BGSC4AW1 (T37001, BGSC4AW1#1) [two complete genomes sequenced for this strain with different MLST sequences; strain sequenced by Biological Defense Research Directorate (BDRD), Rockville, Maryland, USA; sequences conflicting with isolate BGSC4AW1#2] Spain clusterIII AFS004017 B.wiedmannii AFS004017 Plant, Soybean leaf (2014) USA, Minnesota clusterII AFS014598 B.cereus AFS014598 Plant, Corn core (2014) USA, North Carolina clusterIV RU36C B.cereus RU36C clusterII AFS002368 B.cereus AFS002368 Plant, Tomato plant (2014) USA, North Carolina unclustered AFS034246 B.cereus AFS034246 Soil (2013) USA, North Carolina clusterIV FT9 B.cereus FT9 Other, hot springs Brazil, Goias, Caldas Novas clusterIII GBAC46 B.thuringiensis GBAC46 Plant, grass roots (2005) China, Tibet, Nyingchi clusterIV AFS004414 B.cereus AFS004414 Plant, Oats plant (2014) USA, North Carolina unclustered AFS009253 B.thuringiensis AFS009253 Plant, tree leaf (2014) USA, North Carolina clusterIV MOD1Bc62 B.cereus MOD1 Bc62 Human, Baby Wipes (2016) USA, Maryland clusterIII AFS008423 B.cereus AFS008423 Plant, Soybean core (2014) USA, Iowa clusterIV FSLW8-0268 B.cereus FSL W8-0268 Other, Evaporator (last effect) - Liquid (WIP) (2012) USA, New York clusterIV MB.1 B.cereus MB.1 Food (2014) Germany, Munich clusterIII MOD1Bc81 B.cereus MOD1 Bc81 Food, Whole Black Pepper (2015) USA, Maryland clusterIII BGSC4AX1 B.thuringiensis novosibirsk BGSC4AX1 (T24a001) Soil USSR clusterIV AFS052794 B.thuringiensis AFS052794 Plant, Soybean leaf (2014) USA, Minnesota clusterIV AFS096410 B.thuringiensis AFS096410 Plant, Corn leaf (2014) USA, Illinois clusterIV AFS088052 B.cereus AFS088052 Plant, Corn core (2014) USA, Illinois clusterIV AFS052034 B.thuringiensis AFS052034 Plant, Soybean leaf (2014) USA, Minnesota clusterIV AFS011950 B.cereus AFS011950 Plant, Corn core (2014) USA, North Carolina unclustered MOD1Bc140 B.cereus MOD1 Bc140 Food, Dietary Supplements (2015) USA, Maryland clusterIII 08CEB44bac B.cytotoxicus AFSSA08CEB44bac (08CEB44bac) Food, cooked semolina (2008) [related to food poisoning] France clusterVII JEM-2 B.cereus JEM-2 Other, Surface (2009) clusterIII MBGJa3 B.cereus MBGJa3 Animal, Jackal Excreta (2016) India, New Delhi Zoological Park clusterIV MOD1Bc184 B.cereus MOD1 Bc184 Human, Baby Wipes (2016) USA, Maryland clusterIII 6/27/S B.cereus 6/27/S Human, faeces/stools [human diarrhea] clusterIV AFS059242 B.thuringiensis AFS059242 Other, excrement (2014) USA, Iowa clusterIV AFS071107 B.cereus AFS071107 Plant, Soybean root (2014) USA, Iowa clusterIV MOD1Bc190 B.cereus MOD1 Bc190 Human, Baby Wipes (2016) USA, Maryland clusterIII AFS002415 B.anthracis AFS002415 Plant, Weed core (2014) USA, North Carolina clusterIII BGSC4C1 B.thuringiensis alesti BGSC4C1 (AH842, HD16, CCEB463) Animal, Insect, silkworm (Bombyx mori) (1987) [two complete genomes sequenced for this strain with identical MLST sequences] Czechoslovakia clusterIV HD571 B.thuringiensis kyushuensis DSM6080 (HD571) Japan clusterIII RIVMBC126#2 B.wiedmannii RIVMBC126 (RIVMBC126#2) Human, faeces/stools (1999) [diarrheal food poisoning; two complete genomes sequenced for this strain with different MLST sequences; strain sequenced by Lehrstuhl fuer Mikrobielle Oekologie, Technische Universitaet Muenchen, Freising, Germany; sequences conflicting with isolate RIVMBC126#1] Netherlands clusterII AFS097384 B.cereus AFS097384 Soil (2014) USA, North Carolina clusterVI Sterne09RA8929 B.anthracis Sterne 09RA8929 Other, laboratory stock culture (2017) Germany clusterIII SJ-S20 B.cereus SJ-S20 Human USA, Tennessee, Memphis clusterIII MOD1Bc119 B.cereus MOD1 Bc119 Food, Whole Black Pepper (2015) USA, Maryland clusterIII AFS000753 B.toyonensis AFS000753 Plant, Soybean leaf (2014) USA, Illinois clusterV AFS044520 B.cereus AFS044520 Plant, Soybean core (2014) USA, Iowa clusterIV AFS063894 B.thuringiensis AFS063894 Food, Mushroom (2013) USA, Iowa clusterIV MOD1Bc86 B.cereus MOD1 Bc86 Food, Whole Black Pepper (2015) USA, Maryland clusterIV NEU1062 B.paranthracis NEU 1062 Soil (1983) Switzerland, Bern clusterIII BGSC4Q1 B.thuringiensis israelensis BGSC4Q1 (HD567, ONR60A) Animal, Insect, Culicidae (Mosquitoes) larvae (1977) [two complete genomes sequenced for this strain with identical MLST sequences] Israel clusterIV BGSC4AH1 B.thuringiensis konkukian BGSC4AH1 (HL47, T34001) (1994) South Korea clusterIII MOD1Bc214 B.cereus MOD1 Bc214 Human, Baby Wipes (2016) USA, Maryland clusterIII AFS075998 B.mycoides AFS075998 Plant, core (2014) USA, North Carolina clusterVI HD542 B.thuringiensis thompsoni HD542 (BGSC4O1, AH454, T12001, DD960) Animal, insect USA clusterIV T01328 B.thuringiensis T01328 Soil (1994) Brazil, Sao Paulo, Cubatao county clusterIV MOD1Bc21 B.cereus MOD1 Bc21 Plant, Natural Sesame Seeds (2015) USA, Maryland clusterIV JRS1 B.cereus JRS1 unclustered ANSES122 B.anthracis ANSES122 clusterIII AFS009143 B.cereus AFS009143 Soil (2014) USA, New York clusterVI HS18-1 B.thuringiensis HS18-1 Soil (2009) China, Sichuan Province unclustered 16SBCL1279 B.cereus 16SBCL1279 Human, Breast milk (2016) France, Ile-de-France Lactarium, Paris clusterIV AFS061268 B.toyonensis AFS061268 Plant, Soybean leaf (2014) USA, Minnesota clusterV AFS089336 B.pseudomycoides AFS089336 Plant, Corn core (2014) USA, Illinois unclustered MOD1Bc197 B.cereus MOD1 Bc197 Human, Baby Wipes (2016) USA, Maryland clusterIII AFS019545 B.thuringiensis AFS019545 Plant, core (2014) USA, North Carolina clusterIV AFS023423 B.wiedmannii AFS023423 Plant, Corn (2014) USA, Iowa clusterII BGSC4BA1 B.thuringiensis pondicheriensis BGSC4BA1 (T20a001, B23) Soil [two complete genomes sequenced for this strain with identical MLST sequences] India clusterIII AFS011202 B.cereus AFS011202 Plant, Soybean core (2014) USA, Iowa unclustered AFS095703 B.cereus AFS095703 Plant, Weed core (2014) USA, North Carolina clusterIV AFS060282 B.cereus AFS060282 Plant, Corn core (2014) USA, North Carolina clusterIV AFS003288 B.pseudomycoides AFS003288 Plant, Corn leaf (2014) USA, Illinois clusterI AH725 B.cereus AH725 Human, eye (1995) Norway, Skien clusterIV MS532a B.thuringiensis MS532a Food, Mixed salad (2015) Germany, Kiel clusterIV AFS086321 B.cereus AFS086321 Plant, core (2014) USA, North Carolina clusterIV B4088 B.cereus B4088 Food (2013) Netherlands clusterII A46 B.anthracis A46 Other, swine (Sus scrofa) (1970) Germany, Stuttgart clusterIII 2000031031 B.anthracis 2000031031 Human (1957) USA, Massachusetts clusterIII DE0272 B.proteolyticus DE0272 clusterVI ISSFR-3F B.cereus ISSFR-3F Other, Air (2011) clusterIII AFS061653 B.thuringiensis AFS061653 Plant, core (2014) USA, North Carolina clusterIV AFS094920 B.wiedmannii AFS094920 (2014) USA, Iowa clusterII IP5832 B.cereus IP5832 Other, commercial probiotic clusterV BC04#1 B.cereus BC04 (BC04#1) Human, faeces/stools (2012) India clusterIV AFS066836 B.thuringiensis AFS066836 Soil (2014) USA, Iowa clusterIV Gnyt1 B.mycoides Gnyt1 Soil (2014) China, Zhuaxixiulong township, Tianzhu county, Wuwei city clusterVI AFS050681 B.cereus AFS050681 Soil (2014) USA, Iowa clusterVI GOE4#2 B.weihenstephanensis GOE4#2 Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014) Germany, Goettingen clusterVI AFS074290 B.pseudomycoides AFS074290 Plant, Soybean leaf (2014) USA, Minnesota unclustered AFS031783 B.cereus AFS031783 Plant, Soybean leaf (2014) USA, Minnesota clusterI AFS061760 B.thuringiensis AFS061760 Plant, Corn (2014) USA, Iowa clusterIV AFS074370 B.cereus AFS074370 Plant, Soybean core (2014) USA, Iowa unclustered DE0031 B.thuringiensis DE0031 clusterIV AFS008265 B.cereus AFS008265 Plant, Corn (2014) USA, Iowa clusterIV AFS067634 B.thuringiensis AFS067634 Plant, Corn root (2014) USA, Iowa clusterIV BHU1 B.cereus BHU1 Soil, Cropfield soil (2016) India clusterIV AFS085583 B.anthracis AFS085583 Plant, Corn core (2014) USA, North Carolina clusterIII LCT-BC25 B.cereus LCT-BC25 Other, culture sent to space aboard the Shenzhou-8 spacecraft; isolated after space flight clusterIII BAG1X1-3 B.c_group BAG1X1-3 Soil USA, Massachusetts, Boston clusterVI AFS099561 B.toyonensis AFS099561 Plant, Soybean leaf (2014) USA, Minnesota clusterV BAG5X1-1 B.c_group BAG5X1-1 Soil USA, Massachusetts, Boston clusterVI AFS041803 B.cereus AFS041803 Plant, Soybean core (2014) USA, Iowa clusterIV AFS054589 B.wiedmannii AFS054589 Plant, Soybean core (2014) USA, Iowa clusterII AFS021667 B.thuringiensis AFS021667 Plant, Corn core (2014) USA, Illinois clusterIV AFS027647 B.cereus AFS027647 Plant, Core Other Plant (2014) USA, North Carolina unclustered M3 B.cereus M3 Food, Korean fermented food (2016) South Korea clusterIII 2000031075 B.anthracis 2000031075 Animal, cattle South Africa clusterIII AFS091569 B.toyonensis AFS091569 Plant, Soybean root (2014) USA, Iowa clusterV VD200 B.c_group VD200 Other, Water UK, Scotland clusterIV DE0343 B.thuringiensis DE0343 unclustered BGSC4BT1#1 B.thuringiensis BGSC4BT1 (T56001, Scg04-02, BGSC4BT1#1) Soil, red soil [two complete genomes sequenced for this strain with different MLST sequences; both genomes sequenced by State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, Hubei, China; sequences conflicting with isolate BGSC4BT1#2] China clusterIV BGSC4L3 B.thuringiensis tolworthi HD537 (BGSC4L3, AH450) unclustered AFS044295 B.wiedmannii AFS044295 Plant, Soybean root (2014) USA, Iowa clusterII AFS025349 B.cereus AFS025349 Plant, Corn core (2014) USA, North Carolina unclustered I1 B.cereus I1 Soil, Coriander (Coriandrum sativum) undisturbed soil (2016) Israel, Ramat HaNadiv unclustered AFS021349 B.toyonensis AFS021349 Plant, Corn core (2013) USA, Illinois clusterV AFS074519 B.pseudomycoides AFS074519 Soil (2014) USA, Iowa clusterI BGSC4BW1 B.thuringiensis iberica BGSC4BW1 Spain clusterIV 7_6_55CFAA_CT2 B.c_group 7_6_55CFAA_CT2 Human, healthy biopsy tissue from a patient with Crohn-s disease clusterIV AFS043211 B.thuringiensis AFS043211 Plant, core (2014) USA, North Carolina clusterIV AFS071669 B.toyonensis AFS071669 Plant, Corn core (2014) USA, Illinois clusterV BGSC4G1 B.thuringiensis galleriae BGSC4G1 (HD8) Animal, Insect, Greater Wax Moth/Honeycomb Moth (Galleria mellonella) (1958) USSR clusterIV AFS098141 B.pseudomycoides AFS098141 Plant, Corn core (2014) USA, Illinois unclustered CER074 B.weihenstephanensis CER074 Dairy products, Dairy products, raw milk [emetic toxin/cereulide producer toxin/cereulide producer] Belgium clusterVI AFS023251 B.wiedmannii AFS023251 Plant, Soybean core (2014) USA, Iowa clusterII FSLP2-0415 B.wiedmannii FSL P2-0415 Dairy food in process (2009) USA, New York clusterII AFS035954 B.cereus AFS035954 Plant, Corn core (2014) USA, North Carolina clusterIV AFS018331 B.thuringiensis AFS018331 Plant, core (2014) USA, North Carolina clusterIV FSLW8-0520 B.cereus FSL W8-0520 Other, RO - Liquid (WIP) (2012) USA, New York clusterIII AFS084233 B.cereus AFS084233 Plant, Corn core (2014) USA, North Carolina clusterIV AH820 B.c_group AH820 Human, periodontitis (1995) Norway, Akershus clusterIII Ba-8782/92-Geo B.anthracis Ba-8782/92-Geo Animal, Sheep skin (1992) Georgia clusterIII MOD1Bc73 B.cereus MOD1 Bc73 Food, Paprika (2015) USA, Maryland unclustered HuA3-9 B.c_group HuA3-9 Soil Belgium clusterVI AFS062349 B.pseudomycoides AFS062349 Plant, Corn (2014) USA, Minnesota unclustered AFS009643 B.pseudomycoides AFS009643 Plant, Soybean core (2014) USA, Iowa clusterI NRRL23135 B.thuringiensis medellin NRRL23135 Animal, Insect, Culicidae (Mosquitoes) (2013) UK unclustered AFS008413 B.cereus AFS008413 Soil (2014) USA, New York clusterIV AFS093334 B.thuringiensis AFS093334 Plant, Soybean core (2014) USA, Iowa clusterIV AFS032723 B.thuringiensis AFS032723 Plant, Soybean core (2014) USA, Iowa clusterIV G9842 B.cereus G9842 Human, faeces/stools (1996) [from the same food poisoning outbreak as isolates G9843 and G9844; human diarrhea] USA, Nebraska clusterIV AFS037265 B.pseudomycoides AFS037265 Plant, Soybean leaf (2014) USA, Missouri unclustered ANSES90 B.anthracis ANSES90 clusterIII B4080 B.cereus B4080 Food, dried onion (2012) Netherlands clusterIV Canadian_bison B.anthracis Canadian_bison Animal, Bison [pXO1+/pXO2+] Canada clusterIII MB.15 B.cereus MB.15 Food (2014) Germany, Munich clusterIII AFS018668 B.cereus AFS018668 Plant, Corn core (2014) USA, North Carolina unclustered Rock1-3 B.cereus Rock1-3 Soil USA, Maryland, Rockville clusterV AFS017475 B.anthracis AFS017475 Plant, Corn core (2014) USA, Illinois clusterIII AFS039823 B.toyonensis AFS039823 Soil (2014) USA, New York clusterV SJ-S28 B.cereus SJ-S28 Human USA, Tennessee, Memphis unclustered 03BB102 B.cereus 03BB102 (2002734580) Human, blood (2003) [human fatal pneumonia; carries pXO1 plasmid with anthrax virulence genes; two complete genomes sequenced for this strain with identical MLST sequences] USA, Texas, San Antonio clusterIII AFS007900 B.thuringiensis AFS007900 Plant, Soybean core (2014) USA, Iowa clusterIV AFS017371 B.thuringiensis AFS017371 (2014) USA, Iowa clusterIV AFS061780 B.thuringiensis AFS061780 Plant, Oats (2014) USA, North Carolina unclustered AFS009781 B.cereus AFS009781 Soil (2014) USA, New York clusterII AFS025909 B.cereus AFS025909 Plant, Soybean core (2014) USA, Iowa unclustered T0139 B.thuringiensis T0139 Soil (2015) Brazil, Tocantins State clusterIV Pasteur_Standard B.thuringiensis tolworthi Pasteur Institute Standard strain (Pasteur_Standard) unclustered Parent1 B.anthracis Parent1 USA clusterIII AFS058541 B.toyonensis AFS058541 Soil (2014) USA, New York clusterV AFS086407 B.cereus AFS086407 Soil (2014) USA, New York clusterIV FM1 B.cereus FM1 clusterIII AFS057690 B.cereus AFS057690 Soil (2014) USA, New York unclustered AFS056597 B.thuringiensis AFS056597 Soil (2014) USA, North Carolina clusterIV AFS085854 B.cereus AFS085854 Soil (2014) USA, New York clusterVI AFS009893 B.pseudomycoides AFS009893 Plant, Corn root (2014) USA, Iowa unclustered AFS075408 B.thuringiensis AFS075408 Soil (2013) USA, North Carolina clusterIV BGSC4G4 B.thuringiensis galleriae HD305 (BGSC4G4, HDB-34) Animal, Insect, Indian meal moth (Plodia interpunctella) UK, England clusterIV m1550 B.cereus m1550 (277/2, BGSC6A56) Food, uncooked chicken (1987) Brazil clusterIV P4-1-5 B.cereus P4-1-5 clusterIII AFS027898 B.cereus AFS027898 Plant, Soybean core (2014) USA, Iowa clusterIV BGSC4BY1 B.thuringiensis sylvestriensis BGSC4BY1 (T61001, Pbt53) Plant, Scotch pine [sequences conflicting with isolate T61001] Denmark clusterII VDM034 B.c_group VDM034 Soil Spain clusterVI AFS098564 B.pseudomycoides AFS098564 Soil (2014) USA, Iowa clusterI AFS016894 B.thuringiensis AFS016894 Soil (2014) USA, North Carolina clusterIV AFS011189 B.pseudomycoides AFS011189 Plant, Soybean core (2014) USA, Iowa clusterI AFS003846 B.toyonensis AFS003846 Soil (2014) USA, Iowa clusterV AFS091045 B.toyonensis AFS091045 Plant, Soybean leaf (2014) USA, Minnesota clusterV AFS095084 B.cereus AFS095084 Plant, Soybean root (2014) USA, Iowa unclustered BAG4O-1 B.c_group BAG4O-1 Soil USA, Massachusetts, Boston clusterIV AFS011149 B.wiedmannii AFS011149 Plant, Soybean leaf (2014) USA, Iowa clusterII 52-40-NIAH B.anthracis 52-40-NIAH Animal, horse (1940) [pXO1+/pXO2+] China clusterIII AFS088199 B.cereus AFS088199 Plant, Corn core (2014) USA, Illinois clusterVI MOD1Bc99 B.cereus MOD1 Bc99 Other, Oxytetracycline Medicated Fish Feed (2006) USA, Maryland clusterIII DE0298 B.thuringiensis DE0298 clusterIV BGSC4BL1 B.thuringiensis muju BGSC4BL1 Argentina clusterIII FSLM8-0473 B.cereus FSL M8-0473 (2015) USA clusterIV UBA3967 B.thuringiensis UBA3967 clusterIV AFS041177 B.toyonensis AFS041177 Plant, Weed leaf (2014) USA, Ohio clusterV AND1407 B.c_group AND1407 Food clusterIII AFS083448 B.toyonensis AFS083448 Plant, Soybean leaf (2014) USA, Minnesota clusterV MOD1Bc50 B.cereus MOD1 Bc50 Food, Whole Black Pepper (2015) USA, Maryland clusterIII AFS080374 B.pseudomycoides AFS080374 Plant, Corn core (2014) USA, Illinois unclustered AFS000517 B.thuringiensis AFS000517 Plant, Soybean core (2014) USA, Iowa clusterIV BAG1X2-2 B.c_group BAG1X2-2 Soil USA, Massachusetts, Boston unclustered AFS049531 B.pseudomycoides AFS049531 Soil (2014) USA, Iowa unclustered MOD1Bc137 B.cereus MOD1 Bc137 Food, Dietary Supplements (2015) USA, Maryland unclustered AFS028444 B.toyonensis AFS028444 Plant, Corn core (2014) USA, Illinois clusterV AFS097514 B.thuringiensis AFS097514 Plant, Soybean leaf (2014) USA, Iowa clusterIV AFS003117 B.cereus AFS003117 Plant, Soybean core (2014) USA, Iowa clusterIV DE0086 B.paranthracis DE0086 clusterIII AFS012400 B.cereus AFS012400 Plant, Cucumber plant (2014) USA, North Carolina clusterIV AFS007279 B.toyonensis AFS007279 Plant, Weed plant (2014) USA, Indiana clusterV AFS040610 B.toyonensis AFS040610 Soil (2014) USA, New York clusterV 16-00198 B.cereus 16-00198 clusterIV VD131 B.c_group VD131 Soil Martinique clusterV FSLW8-0050 B.cereus FSL W8-0050 Food, Condensed food product from evaporator (2012) USA, New York clusterIII VD014 B.c_group VD014 Soil Spain clusterIV AFS009162 B.cereus AFS009162 Soil (2014) USA, New York clusterVI AFS040627 B.cereus AFS040627 Soil (2013) USA, North Carolina clusterII AFS095788 B.thuringiensis AFS095788 Plant, Soybean leaf (2014) USA, Minnesota clusterIV AFS070572 B.wiedmannii AFS070572 Plant, Soybean root (2014) USA, Iowa clusterII MOD1Bc201 B.cereus MOD1 Bc201 Human, Baby Wipes (2016) USA, Maryland clusterIII 2000032951 B.anthracis 2000032951 Human (1958) clusterIII A1039 B.anthracis A1039 Animal, cattle (1999) Bolivia, Santa Cruz clusterIII AFS098702 B.toyonensis AFS098702 Plant, Soybean root (2013) USA, Minnesota clusterV S3E15 B.mycoides S3E15 Soil (2016) Netherlands clusterVI AFS027862 B.toyonensis AFS027862 Other, excrement (2014) USA, Iowa clusterV Co1-1 B.cereus Co1-1 Other, sludge (2017) China clusterIV AFS027027 B.toyonensis AFS027027 Plant, Corn root (2014) USA, Iowa clusterV AFS036256 B.toyonensis AFS036256 Plant, Soybean root (2014) USA, Missouri clusterV BAG5O-1 B.c_group BAG5O-1 Soil USA, Massachusetts, Boston clusterV DE0016 B.tropicus DE0016 clusterIII FSLW7-1108 B.weihenstephanensis FSL W7-1108 Dairy products, raw milk (2010) USA clusterVI HuA2-1 B.c_group HuA2-1 Soil Belgium clusterVI AFS055470 B.thuringiensis AFS055470 Plant, Soybean leaf (2014) USA, Minnesota clusterIV kn11 B.thuringiensis kn11 Soil (2017) China, Hebei clusterIV MOD1Bc93 B.cereus MOD1 Bc93 Food, Ground Black Pepper (2015) USA, Maryland clusterIV AFS000724 B.cereus AFS000724 Plant, Soybean core (2014) USA, Iowa clusterIV AFS048987 B.toyonensis AFS048987 Plant, Weed leaf (2014) USA, Ohio clusterV AFS068289 B.cereus AFS068289 Plant, Soybean core (2014) USA, Iowa clusterIV BAG2X1-1 B.c_group BAG2X1-1 Soil USA, Massachusetts, Boston unclustered 2000031709 B.anthracis 2000031709 (1956) USA, Carolinas clusterIII AFS052781 B.pseudomycoides AFS052781 Plant, Corn core (2014) USA, Illinois unclustered AFS077478 B.wiedmannii AFS077478 Plant, Soybean leaf (2014) USA, Minnesota clusterII AFS099456 B.pseudomycoides AFS099456 Plant, Corn core (2014) USA, Illinois clusterI AFS094619 B.wiedmannii AFS094619 Plant, Corn core (2014) USA, North Carolina clusterII B4078 B.cereus B4078 (2012) Netherlands clusterIII AFS016448 B.toyonensis AFS016448 Plant, Weed plant (2014) USA, Indiana clusterV AFS099912 B.pseudomycoides AFS099912 Plant, Corn (2014) USA, Iowa unclustered M2E15 B.mycoides M2E 15 Food, Potato (2014) Netherlands clusterVI 16-00177 B.cereus 16-00177 clusterII AFS060037 B.pseudomycoides AFS060037 Soil (2014) USA, New York unclustered MOD1Bc188 B.cereus MOD1 Bc188 Human, Baby Wipes (2016) USA, Maryland clusterIII AFS055648 B.cereus AFS055648 Plant, Corn core (2014) USA, North Carolina unclustered F4429/71 B.cereus F4429/71 Food, vanilla pudding (1971) [diarrheal food poisoning outbreak] Netherlands clusterIII 2002013094 B.anthracis 2002013094 Soil (1956) [pXO1+/pXO2+; two complete genomes sequenced for this strain with identical MLST sequences] USA clusterIII 261-1 B.thuringiensis 261-1 Soil (2003) China, Hebei, Baoding clusterIII TK1 B.cereus TK1 Soil or plant, black pepper plant rhizosphere (2018) Vietnam unclustered AFS048015 B.cereus AFS048015 Plant, tree leaf (2014) USA, North Carolina unclustered BGSC4CD1 B.thuringiensis graciosensis BGSC4CD1 (T66001, EA15196) Soil Azores clusterIII PR02 B.anthracis PR02 USA clusterIII AFS024482 B.pseudomycoides AFS024482 (2014) USA, Iowa unclustered P482 B.anthracis BAP482 clusterIII GOE1#1 B.thuringiensis GOE1#1 Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014) Germany, Goettingen unclustered SJ-S10 B.cereus SJ-S10 Human USA, Tennessee, Memphis clusterIV DE0340 B.mycoides DE0340 clusterVI AFS034468 B.cereus AFS034468 Soil (2014) USA, New York clusterII AFS057596 B.cereus AFS057596 Plant, Weed core (2014) USA, North Carolina unclustered AFS091954 B.cereus AFS091954 Soil (2014) USA, New York clusterVI YBT-1520#1 B.thuringiensis kurstaki YBT-1520 (YBT-1520#1) Soil (1990) [two complete genomes sequenced for this strain with different MLST sequences; both genomes sequenced by State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, Hubei, China; sequences conflicting with isolate YBT-1520#2] China unclustered AFS044195 B.anthracis AFS044195 Plant, tree leaf (2013) USA, North Carolina clusterIII AFS033387 B.wiedmannii AFS033387 Soil (2014) USA, Iowa clusterII AFS068308 B.cereus AFS068308 Plant, tree leaf (2014) USA, North Carolina unclustered T02001 B.thuringiensis finitimus HD3 (BGSC4B2, T02001) Animal, Insect, forest tent caterpillar moth (Malacosoma disstria) (1958) [two complete genomes sequenced for this strain with identical MLST sequences] USA clusterIII 52-G B.anthracis 52-G Animal, cattle (bovine) (2009) [pXO1+/pXO2+] Georgia, Tbilisi clusterIII AFS030860 B.cereus AFS030860 Plant, Corn core (2014) USA, North Carolina clusterIV AFS081482 B.cereus AFS081482 Plant, Soybean core (2014) USA, Iowa unclustered AFS061177 B.thuringiensis AFS061177 Plant, Soybean leaf (2014) USA, Illinois clusterIV SJ-S23 B.cereus SJ-S23 Human USA, Tennessee, Memphis clusterIV B4155 B.cereus B4155 Food (2013) Netherlands clusterIV DE0074 B.cereus B4264 DE0074 clusterIV 62 B.thuringiensis japonensis 62 Animal, Insect, Coleoptera (2013) UK clusterIV FSLK6-1030 B.cereus FSL K6-1030 Dairy products, condensed milk (2013) USA unclustered VD107 B.c_group VD107 Soil Guadeloupe clusterVI AFS020602 B.thuringiensis AFS020602 Soil (2014) USA, New York clusterIV MB.17 B.cereus MB.17 Food (2014) Germany, Munich clusterIII AFS072123 B.toyonensis AFS072123 Plant, core (2014) USA, North Carolina clusterV INRAA3 B.cereus INRA A3 Food, starch (1998) (1998) France, Normandie clusterIV AFS006012 B.cereus AFS006012 Plant, Corn core (2014) USA, North Carolina unclustered FORC047 B.cereus FORC 047 Food, Salad (2015) South Korea, Gwangju clusterIV JCM15802 B.manliponensis type strain JCM15802 (MCCC1A00708, BL4-6, KCTC13319) Other, Yellow Sea tidal flat sediment (2011) unclustered AFS062062 B.cereus AFS062062 Plant, Core Corn (2014) USA, North Carolina clusterIV AFS014847 B.cereus AFS014847 Plant, Corn (2014) USA, Iowa clusterIV AFS059650 B.cereus AFS059650 Plant, Corn core (2014) USA, North Carolina clusterIV AFS093126 B.thuringiensis AFS093126 Soil (2014) USA, Iowa clusterIV T68001 B.thuringiensis thailandensis T68001 Thailand clusterIII MHI86 B.cereus MHI 86 Food, infant food Germany clusterIII 7.1o B.thuringiensis kurstaki 7.1o Animal, Insect, silkworm (Bombyx mori) (2013) UK unclustered PG18 B.albus PG 18 Other, phosphogypsum piles (2018) Tunisia, Gafsa clusterII Ba-9108/08-Geo B.anthracis Ba-9108/08-Geo Human, Patient ulcer (2008) Georgia clusterIII B4153 B.cereus B4153 Dairy products, milk, (fermented) dairy products and desserts (2012) Netherlands clusterIII AFS007793 B.cereus AFS007793 Plant, Soybean core (2014) USA, Iowa unclustered AFS086995 B.toyonensis AFS086995 Plant, Soybean leaf (2014) USA, Minnesota clusterV PG1 B.albus PG 1 Other, phosphogypsum piles (2018) Tunisia, Gafsa clusterII AFS040883 B.pseudomycoides AFS040883 Soil (2014) USA, North Carolina clusterI F B.cereus F Soil, ancient permafrost aged nearly 3 million years Russia, Yakutia clusterIII AFS053236 B.wiedmannii AFS053236 Plant, Corn root (2014) USA, Iowa clusterII AFS016599 B.cereus AFS016599 Plant, Corn (2014) USA, North Carolina clusterIV ATCC10987#2 B.cereus ATCC10987#2 (ATCC10987) Dairy products, Cheese (1930) [strain named ATCC10987 but sequences conflicting with isolate ATCC10987#1 and different origin] Pakistan, Ravi River clusterIII AFS061455 B.thuringiensis AFS061455 Plant, Corn core (2014) USA, Illinois clusterIV NZAS01 B.cereus NZAS01 Food, egg white (2015) New Zealand, Dunedin clusterIII MOD1Bc97 B.cereus MOD1 Bc97 Other, Oxytetracycline Medicated Fish Feed (2006) USA, Maryland clusterIII AFS021654 B.toyonensis AFS021654 Plant, Soybean core (2014) USA, Iowa clusterV BGSC4AC1 B.thuringiensis mexicanensis BGSC4AC1 Soil (1988) Mexico clusterIII MYBT18246 B.thuringiensis MYBT18246 Animal, nematode (Caenorhabditis elegans) clusterIV AFS018356 B.pseudomycoides AFS018356 Plant, Corn core (2014) USA, Illinois clusterI DSM11821 B.weihenstephanensis type strain WSBC10204 (DSM11821, AH1145, KB008, NBRC101238) Dairy products, pasteurized milk (1992) [from the same dairy as isolates WSBC10028, WSBC10029, WSBC10030, WSBC10031, WSBC10042, WSBC10201, WSBC10205, WSBC10206, WSBC10208, and WSBC10211; two complete genomes sequenced for this strain with identical MLST sequences; sequences conflicting with isolate WSBC10204] clusterVI FRI35 B.cereus FRI-35 (FRI35) clusterIII AFS059559 B.thuringiensis AFS059559 Soil (2014) USA, North Carolina clusterIV AFS055486 B.cereus AFS055486 Plant, Soybean core (2014) USA, Iowa clusterIV AFS071638 B.thuringiensis AFS071638 Plant, Soybean root (2013) USA, Minnesota clusterIV AFS043533 B.cereus AFS043533 Plant, Soybean root (2014) USA, Minnesota unclustered AFS060304 B.anthracis AFS060304 Plant, Wheat plant (2014) USA, North Carolina clusterIII BC-AK B.cereus BC-AK Animal, kangaroo (2016) China, Guangxi clusterIII AFS078153 B.wiedmannii AFS078153 Animal, earthworm (2013) USA, Minnesota clusterII AFS040986 B.cereus AFS040986 Plant, Soybean core (2014) USA, Iowa clusterIV 2000031023 B.anthracis 2000031023 Animal, cattle (1957) clusterIII SJ-S9 B.cereus SJ-S9 Human USA, Tennessee, Memphis clusterIV HuB4-4 B.c_group HuB4-4 Soil Belgium clusterIV ML-A2C4 B.mobilis ML-A2C4 Other, air (2016) Canada, Vancouver clusterII AFS016912 B.cereus AFS016912 Plant, core (2014) USA, North Carolina unclustered FSLH7-0683 B.mycoides FSL H7-0683 Dairy products, pasteurized 2% milk (2005) USA clusterVI AFS056613 B.cereus AFS056613 Soil (2014) USA, New York clusterVI DB-1 B.mycoides DB-1 USA, Pennsylvania clusterVI I149 B.cereus I149 Plant, Grass (2017) Israel, Karie Deshe clusterIV AFS004498 B.cereus AFS004498 (2014) USA, North Carolina clusterIV AFS054833 B.cereus AFS054833 Plant, Weed core (2014) USA, North Carolina clusterIV AFS005140 B.thuringiensis AFS005140 Plant, Corn root (2014) USA, Iowa clusterIV AFS039926 B.cereus AFS039926 Soil (2014) USA, New York clusterVI 172560.W B.cereus 172560.W (BGSC6A62) Human, burn wound (2003) [human wound infection] UK, Scotland, Glasgow clusterIV F34 B.anthracis F34 Other, salt lake (2016) Algeria, Ain Baida-Ouargla clusterIII AFS073530 B.thuringiensis AFS073530 Plant, Soybean leaf (2014) USA, Iowa clusterIV AFS062118 B.anthracis AFS062118 Plant, Corn core (2014) USA, North Carolina clusterIII B4116 B.cereus B4116 Food (2013) Netherlands clusterIII GBSC45 B.wiedmannii GBSC45 Soil (2005) China, Tibet clusterII AFS052321 B.cereus AFS052321 Soil (2014) USA, New York clusterVI AFS000144 B.cereus AFS000144 Plant, Corn (2014) USA, Iowa clusterIV F65185 B.cereus F65185 (2002734558) Human, wound (2005) [from an open fracture; encapsulated isolate] USA, New York clusterIV AFS057148 B.cereus AFS057148 Plant, Corn core (2014) USA, Illinois unclustered PR09-4 B.anthracis PR09-4 USA clusterIII CNEVA B.anthracis CNEVA 9066 (A0402, K1887) Human [pXO1+/pXO2+] France (Southern) clusterIII 17OD930 B.anthracis 17OD930 Animal, cattle (bovine) (Bos taurus) placenta (2017) Switzerland, Kanton of Jura clusterIII AFS081381 B.toyonensis AFS081381 Plant, Soybean root (2014) USA, Iowa clusterV GOE5#2 B.weihenstephanensis GOE5#2 Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014) Germany, Goettingen clusterVI AFS026201 B.toyonensis AFS026201 Plant, Soybean leaf (2014) USA, Minnesota clusterV 16-00196 B.cereus 16-00196 clusterIV AFS020717 B.toyonensis AFS020717 Plant, Corn core (2014) USA, Illinois clusterV AFS080276 B.pseudomycoides AFS080276 Plant, Corn core (2014) USA, Illinois unclustered AFS088507 B.thuringiensis AFS088507 Soil (2014) USA, Iowa clusterIV AFS009411 B.cereus AFS009411 Plant, Soybean root (2014) USA, Missouri clusterIV Vollum1B B.anthracis Vollum 1B Human (1951) [weaponized Vollum substrain used in American warheads during the 1960-s; pXO1+/pXO2+] USA clusterIII AFS084075 B.cereus AFS084075 Plant, Corn root (2014) USA, Iowa clusterIV PG9 B.albus PG 9 Other, phosphogypsum piles (2018) Tunisia, Gafsa clusterII T07151 B.thuringiensis aizawai T07151 clusterIV T07148 B.thuringiensis aizawai T07148 clusterIV MOD1Bc218 B.cereus MOD1 Bc218 Human, Baby Wipes (2016) USA, Maryland unclustered AFS055708 B.thuringiensis AFS055708 Plant, core (2014) USA, North Carolina clusterIV 121B B.cereus 121B clusterII AFS011918 B.cereus AFS011918 Plant, core (2014) USA, North Carolina clusterIV B38V B.mycoides B38V Soil or plant, Sunflower (Helianthus annuus) rhizosphere (2010) [promotes sunflower growth] Brazil, Rio Grande do Sul clusterVI T04001 B.thuringiensis sotto T04001 (BGSC4E4, HD6) Canada clusterIV BtB2-4 B.weihenstephanensis BtB2-4 Soil, forest soil mud [emetic toxin/cereulide producer] Belgium clusterVI AFS050027 B.cereus AFS050027 Soil (2014) USA, New York clusterVI PFAB2 B.anthracis PFAB2 Other, hot water spring (2015) India, West Bengal, Asansol clusterIII AFS077647 B.cereus AFS077647 Plant, Soybean root (2014) USA, Missouri unclustered HD1011 B.thuringiensis pondicheriensis HD1011 (1915) India clusterIII AFS020204 B.cereus AFS020204 Plant, Soybean core (2014) USA, Iowa clusterIV AFS063736 B.thuringiensis AFS063736 Plant, Soybean root (2014) USA, Iowa clusterIV AFS094706 B.thuringiensis AFS094706 (2014) USA, Iowa clusterIV VD169 B.c_group VD169 Soil UAE, Dubai unclustered RIVMBC120 B.cereus RIVMBC120 (INRA399) [diarrheal food poisoning] clusterII LCR12 B.cereus LCR12 Plant, karkalla (Carpobrotus rossii) (2014) [from Cadmium-contaminated soil] Australia, Melbourne clusterIV AFS054835 B.thuringiensis AFS054835 Plant, Corn leaf (2014) USA, Iowa clusterIV BA04 B.thuringiensis BA04 Soil (2013) India, Assam unclustered Leapi01 B.thuringiensis aizawai Leapi01 Animal, Insect, Loreyi Leafworm/Cosmopolitan (Mythimna loreyi/Leucania loreyi) dead larva Spain clusterIV AFS070889 B.cereus AFS070889 Plant, Corn core (2014) USA, North Carolina clusterIV AFS068876 B.cereus AFS068876 Plant, Corn root (2014) USA, Iowa clusterIV AFS053259 B.cereus AFS053259 Plant, Soybean core (2014) USA, Iowa clusterIV A1055 B.anthracis A1055 (2000031021, GroupC) [belongs to the divergent C branch; pXO1-/pXO2+] USA, Louisiana clusterIII B4082 B.cereus B4082 Food (2013) Netherlands unclustered CVCS1 B.cereus CVC S1 Human, central venous catheter (2013) Pakistan, Lahore clusterIII AFS026476 B.wiedmannii AFS026476 (2014) USA, Iowa clusterII BHP B.mycoides BHP Soil Papua New Guinea unclustered AFS085829 B.thuringiensis AFS085829 Plant, core (2014) USA, North Carolina clusterIV B26 B.mycoides B26 Food, Salad leaves (2015) Germany, Kiel clusterVI BAM B.thuringiensis BAM Soil (2018) USA, New Hampshire, Hanover, park adjacent to Geisel Medical School clusterIV BCT-7112 B.toyonensis type strain BCT-7112 (CECT876, NCIMB14858) Soil (1966) [active ingredient of the feed additive preparation Toyocerin] Japan, Shizuoka Prefecture, Izu clusterV AFS029792 B.cereus AFS029792 Soil (2014) USA, New York unclustered AFS098742 B.cereus AFS098742 Plant, Corn core (2014) USA, North Carolina clusterIV Lr7/2 B.thuringiensis Lr7/2 Other, Water (2011) Chile, Lirima thermal springs clusterIV CMCCP0021 B.cereus CMCC P0021 Soil (1979) China clusterIV UT308 B.anthracis UT308 clusterIII 2000032989 B.anthracis 2000032989 clusterIII AFS095604 B.pseudomycoides AFS095604 Plant, Soybean core (2014) USA, Iowa unclustered VD102 B.c_group VD102 Soil Guadeloupe clusterIII AFS002757 B.cereus AFS002757 Soil (2014) USA, New York clusterVI ZB201708 B.cereus ZB201708 Soil (2017) China clusterIV AFS013997 B.cereus AFS013997 Plant, Corn core (2014) USA, North Carolina unclustered AFS032990 B.anthracis AFS032990 Plant, Corn core (2014) USA, Illinois clusterIII AFS001900 B.cereus AFS001900 Plant, Corn plant (2014) USA, North Carolina clusterIV Rock3-29 B.cereus Rock3-29 Soil USA, Maryland, Rockville clusterV GOE1#2 B.weihenstephanensis GOE1#2 Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014) Germany, Goettingen clusterVI HD73 B.thuringiensis kurstaki HD73 (BGSC4D4, KT0, AP77BX17) Animal, Insect [two complete genomes sequenced for this strain with identical MLST sequences] unclustered AFS001713 B.anthracis AFS001713 Plant, core (2014) USA, North Carolina clusterIII AFS088632 B.pseudomycoides AFS088632 Plant, Soybean core (2014) USA, Iowa unclustered Lr4/2 B.cereus Lr4/2 clusterIV 2000032879 B.anthracis 2000032879 (1962) clusterIII CMCCP0011 B.cereus CMCC P0011 Soil (1984) China clusterIV BGSC4A3 B.thuringiensis thuringiensis BGSC4A3 Animal, Insect, silkworm (Bombyx mori) (2013) UK clusterIV BGSC4J5 B.thuringiensis aizawai BGSC4J5 Animal, Insect, Indian meal moth (Plodia interpunctella) UK, England clusterIV AH1271 B.cereus AH1271 Other, secretary lamp; Reykjavik University Hospital (1999) [from the same hospital as isolates AH1270, AH1272, and AH1273] Iceland, Reykjavik clusterII MC28 B.thuringiensis MC28 Soil, virgin forest soil China, Mu Chuan virgin forest, Sichuan Province clusterV AFS041432 B.cereus AFS041432 Plant, Weed leaf (2014) USA, Ohio clusterVI T61001 B.thuringiensis sylvestriensis BGSC4BY1 (T61001, Pbt53) [sequences conflicting with isolate BGSC4BY1] clusterII AFS011006 B.cereus AFS011006 Plant, Soybean leaf (2013) USA, Minnesota clusterIV AFS062641 B.cereus AFS062641 Plant, core (2014) USA, North Carolina clusterIV AFS011848 B.thuringiensis AFS011848 Plant, Soybean core (2014) USA, Iowa unclustered MOD1Bc203 B.cereus MOD1 Bc203 Human, Baby Wipes (2016) USA, Maryland clusterIV AFS056025 B.cereus AFS056025 Plant, Corn core (2014) USA, Illinois clusterIV SK-102 B.anthracis SK-102 Other, Wool from Pakistan (1976) [pXO1+/pXO2+] USA, New Jersey clusterIII MOD1Bc77 B.cereus MOD1 Bc77 Plant, Sesame Seed (2015) USA, Maryland clusterIV IS5056 B.thuringiensis thuringiensis IS5056 Soil (2005) Poland, Biebrza National Park clusterIV AFS047280 B.cereus AFS047280 Plant, Corn core (2014) USA, North Carolina clusterIV KS100Bc B.cereus KS100Bc Food service operation (2014) South Korea, Gyeonggi-do clusterIII AFS022373 B.wiedmannii AFS022373 Soil (2014) USA, New York clusterII AFS082683 B.cereus AFS082683 Plant, Soybean leaf (2014) USA, Illinois clusterIV AFS028506 B.anthracis AFS028506 Plant, core (2014) USA, North Carolina clusterIII AFS009035 B.cereus AFS009035 Plant, Soybean core (2014) USA, Iowa clusterIV AFS058404 B.cereus AFS058404 Plant, Weed plant (2014) USA, North Carolina unclustered AFS034708 B.thuringiensis AFS034708 Plant, core (2014) USA, North Carolina unclustered AFS095135 B.pseudomycoides AFS095135 Plant, leaf (2014) USA, Indiana unclustered DE0320 B.thuringiensis DE0320 clusterIV FSLK6-0043 B.cereus FSL K6-0043 Dairy products, Laboratory Heat Treated Raw Milk (2012) USA, New York clusterIV MOD1Bc133 B.cereus MOD1 Bc133 Food, Dietary Supplements (2015) USA, Maryland clusterIII SDAGO95 B.weihenstephanensis SDA GO95 (1997) Sweden clusterVI AFS069374 B.pseudomycoides AFS069374 Soil (2014) USA, North Carolina unclustered AFS076104 B.cereus AFS076104 Plant, Corn core (2014) USA, North Carolina clusterIV DE0505 B.cereus DE0505 clusterIV AFS036998 B.wiedmannii AFS036998 Soil (2014) USA, New York clusterII AFS080672 B.wiedmannii AFS080672 Soil (2014) USA, New York clusterII F3162/04 B.cereus F3162/04 Human, faeces/stools (2004) [clinical isolate] clusterIII BGSC4AN1 B.thuringiensis shanongiensis HD1012 (AH462, BGSC4AN1, T2, T22001, DSM6075) Soil (1986) China clusterV MS735 B.toyonensis MS735 Food, Mixed salad (2015) Germany, Kiel clusterV AFS076352 B.cereus AFS076352 Soil (2014) USA, New York clusterVI FSLH8-0488 B.cereus FSL H8-0488 Other, Water from hose connected to pond (2006) USA, New York clusterV 3154 B.anthracis 3154 Soil Bulgaria clusterIII AFS075404 B.toyonensis AFS075404 Plant, Soybean root (2013) USA, Minnesota clusterV AFS065853 B.cereus AFS065853 Plant, core (2014) USA, North Carolina clusterII AFS020128 B.thuringiensis AFS020128 Plant, Soybean root (2013) USA, Minnesota clusterIV AFS046104 B.cereus AFS046104 Plant, core (2014) USA, North Carolina clusterVI AFS031003 B.cereus AFS031003 Plant, Corn core (2014) USA, North Carolina clusterIV AFS030229 B.cereus AFS030229 Plant, core (2014) USA, North Carolina clusterIV AFS020540 B.cereus AFS020540 Plant, Corn core (2014) USA, Illinois clusterVI ISP3191 B.c_group ISP3191 Food clusterIII STI1 B.anthracis STI1 Other, laboratory strain (1970) [vaccine strain; pXO1+/pXO2-] Russia, Saratov clusterIII Smith1013 B.anthracis Smith 1013 (Pasteur-like) [pXO1-/pXO2+] clusterIII BGSC4BV1 B.thuringiensis argentinensis BGSC4BV1 Argentina clusterII AFS050088 B.pseudomycoides AFS050088 Plant, Corn leaf (2014) USA, Illinois unclustered CCTCCM2014513 B.cereus CCTCC M2014513 Other, tannery wastewater active sludge (2010) China, Sichuan Province clusterIV VD156 B.c_group VD156 Soil UAE, Abu Dhabi clusterIV AFS055677 B.cereus AFS055677 Soil (2014) USA, Iowa clusterVI BMB3201 B.thuringiensis BMB3201 Soil (2015) China, Hubei Province clusterIV OM04-20 B.cereus OM04-20 Human, faeces/stools (2013) China, Shenzhen unclustered AFS059960 B.cereus AFS059960 Plant, Corn core (2014) USA, North Carolina unclustered AFS001294 B.toyonensis AFS001294 Plant, Corn core (2014) USA, Illinois clusterV FSLM7-0044 B.wiedmannii FSL M7-0044 Dairy products, raw milk (2011) USA, New York clusterII AFS025165 B.cereus AFS025165 Plant, Corn root (2014) USA, Iowa unclustered ANSES94 B.anthracis ANSES94 clusterIII MB.8-1 B.cereus MB.8-1 Food (2014) Germany, Munich clusterIII IPPBIOTSUC1012 B.thuringiensis IPPBIOTSUC1012 Soil, forest park (2011) China, Beijing clusterIV A9 B.cereus A9 (2014) Australia clusterIV D17 B.cereus D17 (FRI13) [Food Research Institute, University of Wisconsin-Madison] USA, Wisconsin, Madison clusterIII IS195 B.c_group IS195 Animal, Mammals Poland clusterIII AFS060293 B.toyonensis AFS060293 Other, excrement (2014) USA, Iowa clusterV AFS040106 B.cereus AFS040106 Plant, Corn core (2014) USA, North Carolina unclustered SJ-S6 B.cereus SJ-S6 Human USA, Tennessee, Memphis clusterIV FORC087 B.cereus FORC087 Food, Chives (2016) South Korea, Seoul clusterIV H3081.97 B.cereus H3081.97 (2002734506) Food (1997) [emetic toxin/cereulide producer; from the same food poisoning outbreak as isolates H3074.97 and H3076.97; outbreak linked to rice] USA, Texas clusterIII AFS054473 B.pseudomycoides AFS054473 Plant, Corn core (2014) USA, North Carolina clusterI ATCC10792#1 B.thuringiensis thuringiensis type strain ATCC10792 (IMSNU12088, DSM2046, WS2734, AH1083, HD735, CIP53.137, KCTC3452, KCTC1034, BGSC4A11, ATCC10792#1) [three complete genomes sequenced for this strain with different sequences and origins; strain sequenced by Department of Food Science and Biotechnology College of Biotechnology and Bioscience, Kangwon National University, Chunchon, South Korea; sequences conflicting with isolates ATCC10792#2 and ATCC10792#3] clusterIV AFS023730 B.cereus AFS023730 Plant, core (2014) USA, North Carolina unclustered 500 B.anthracis BA500 clusterIII MOD1Bc233 B.cereus MOD1 Bc233 Human, faeces/stools (2016) USA, Maryland clusterIII AFS054461 B.toyonensis AFS054461 Soil (2014) USA, Iowa clusterV AFS082524 B.cereus AFS082524 Plant, Soybean core (2014) USA, Iowa unclustered C15#1 B.thuringiensis C15#1 Soil (1970) [spore crystal association (SCA) phenotype] China clusterIV A16 B.anthracis A16 [pXO1+/pXO2+] clusterIII RIVMBC938 B.cereus RIVMBC938 (KAL738) Food, lamb-s lettuce/Corn salad (2002) clusterII AFS065816 B.cereus AFS065816 Plant, Weed leaf (2014) USA, Indiana clusterIV VD142 B.c_group VD142 Soil UK, Scotland clusterVI Cvac02 B.anthracis Cvac02 Animal, dead cow blood (2013) [from the site of an anthrax outbreak] China, Liaoning Province clusterIII PR1 B.paranthracis PR1 Plant, Tobacco rhizosphere soil (2011) China, Hunan Province clusterIII AFS090953 B.toyonensis AFS090953 (2014) USA, North Carolina clusterV 820BCER B.cereus 820 BCER Human USA, Washington clusterIV AFS087218 B.cereus AFS087218 Soil (2014) USA, North Carolina unclustered AFS066968 B.cereus AFS066968 Plant, Soybean root (2014) USA, Missouri clusterVI AFS093186 B.cereus AFS093186 Plant, core (2014) USA, North Carolina clusterIV AFS030115 B.wiedmannii AFS030115 Plant, Corn root (2014) USA, Iowa clusterII AFS030742 B.cereus AFS030742 Plant, Corn core (2014) USA, North Carolina clusterIV AFS017687 B.toyonensis AFS017687 Soil (2014) USA, Iowa clusterV MOD1Bc206 B.cereus MOD1 Bc206 Human, Baby Wipes (2016) USA, Maryland clusterII AFS054563 B.wiedmannii AFS054563 Plant, Corn leaf (2014) USA, Illinois clusterII AFS014145 B.thuringiensis AFS014145 Plant, Soybean root (2013) USA, Illinois clusterIV 16-00185 B.cereus 16-00185 clusterII AFS056009 B.thuringiensis AFS056009 (2014) USA, Iowa unclustered AFS067491 B.toyonensis AFS067491 Soil (2014) USA, North Carolina clusterV DE0100 B.cereus DE0100 clusterIV INRAC3 B.cereus INRA C3 Food, pasteurized carrot (1996) (1996) France, Vaucluse clusterIV BGSC4CC1 B.thuringiensis pulsiensis BGSC4CC1 (T65001, AH1357, NARC Bt17) Soil, grain field Pakistan clusterIII DE0099 B.tropicus DE0099 clusterIII A0442 B.anthracis LSU442 (K6835, A0442, 28, K88) Animal, Kudu (1975) [pXO1+/pXO2+] South Africa, Kruger National Park clusterIII WSBC10969 B.mycoides WSBC10969 Dairy products, raw milk (2014) Germany clusterVI AFS093282 B.cereus AFS093282 Soil (2014) USA, North Carolina clusterIII AFS083123 B.cereus AFS083123 Plant, core (2014) USA, North Carolina unclustered GOE7#2 B.weihenstephanensis GOE7#2 Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014) Germany, Goettingen clusterVI 16-00193 B.cereus 16-00193 clusterIII AFS007234 B.cereus AFS007234 Plant, Soybean core (2014) USA, Iowa unclustered BHU2 B.cereus BHU2 Soil, forest soil (2016) India clusterIII Stendal B.anthracis Stendal Animal, cattle (bovine) (Bos bovis) (2012) Germany, Saxony-Anhalt clusterIII AFS047152 B.cereus AFS047152 Soil (2014) USA, New York clusterVI MGYG-HGUT-02356 B.wiedmannii MGYG-HGUT-02356 clusterII 16-00188 B.cereus 16-00188 unclustered BGSC4AF1 B.thuringiensis cameroun T32001 (BGSC4AF1, 273B) Soil Cameroon clusterV AFS036771 B.wiedmannii AFS036771 Plant, Soybean leaf (2014) USA, Minnesota clusterII AFS025490 B.cereus AFS025490 Plant, Soybean core (2014) USA, Iowa clusterIV AFS020233 B.cereus AFS020233 Plant, Corn root (2014) USA, Illinois clusterIV AFS094862 B.toyonensis AFS094862 Soil (2014) USA, Iowa clusterV AFS095574 B.anthracis AFS095574 Plant, root (2014) USA, North Carolina unclustered AFS023425 B.cereus AFS023425 Plant, Soybean core (2014) USA, Iowa unclustered AFS095989 B.thuringiensis AFS095989 Plant, Soybean core (2014) USA, Iowa clusterIV AFS096845 B.cereus AFS096845 Plant, Weed leaf (2014) USA, Indiana unclustered Co15 B.cereus Co15 Other, Sediments (2003) Pacific Ocean unclustered AFS032567 B.cereus AFS032567 Plant, Corn (2014) USA, Iowa clusterIV AFS043018 B.mycoides AFS043018 Soil (2014) USA, North Carolina clusterI MOD1Bc193 B.cereus MOD1 Bc193 Human, Baby Wipes (2016) USA, Maryland clusterIII AFS000475 B.pseudomycoides AFS000475 Plant, Soybean leaf (2014) USA, Minnesota unclustered AFS028441 B.cereus AFS028441 Plant, Corn core (2014) USA, Illinois unclustered AFS041041 B.cereus AFS041041 Plant, core (2014) USA, North Carolina clusterIV FSLW8-0932 B.cereus FSL W8-0932 Dairy products, Liquid skim milk CLT (2013) USA, New York clusterIII AFS026518 B.wiedmannii AFS026518 Plant, soybean seed (2014) USA, Iowa clusterII CZ-2 B.cereus CZ-2 Soil, paddy soil China, Nanjing unclustered AFS079368 B.cereus AFS079368 Plant, core (2014) USA, North Carolina clusterVI VDM006 B.c_group VDM006 Soil Spain unclustered BAG2O-1 B.c_group BAG2O-1 Soil USA, Massachusetts, Boston unclustered BCE-01 B.cereus BCE-01 Human, stomach content (2015) [two complete genomes sequenced for this strain with identical MLST sequences] China, Zhejiang Hangzhou clusterIII AFS037117 B.pseudomycoides AFS037117 Soil (2014) USA, Iowa clusterI BGSC4CE1 B.thuringiensis vazensis BGSC4CE1 Soil Azores clusterIII AFS080080 B.wiedmannii AFS080080 Plant, Corn core (2014) USA, Illinois clusterII TYU3 B.toyonensis TYU3 Plant, Japanese yew (Taxus cuspidata) (2015) South Korea unclustered AFS046545 B.thuringiensis AFS046545 Plant, Corn core (2014) USA, Illinois clusterIV AFS020887 B.anthracis AFS020887 Plant, Corn core (2014) USA, Illinois clusterIII AFS011667 B.toyonensis AFS011667 Soil (2014) USA, Iowa clusterV AFS089688 B.toyonensis AFS089688 Plant, Grass core (2014) USA, Iowa clusterV AFS076931 B.toyonensis AFS076931 Soil (2014) USA, Iowa clusterV HD771 B.thuringiensis HD771 clusterIV AFS058160 B.toyonensis AFS058160 Plant, Soybean core (2014) USA, Iowa clusterV AFS048113 B.anthracis AFS048113 Plant, Weed core (2014) USA, North Carolina clusterIII MOD1Bc143 B.cereus MOD1 Bc143 Food, Hybrid Tilapia (2006) USA, Maryland clusterIV AFS000393 B.cereus AFS000393 Plant, Corn root (2014) USA, Iowa clusterVI SJ-S17 B.cereus SJ-S17 Human USA, Tennessee, Memphis clusterIV AFS079122 B.pseudomycoides AFS079122 Plant, Soybean core (2014) USA, Iowa unclustered CH1 B.cytotoxicus CH 1 Food, Mashed potatoes (2015) Switzerland clusterVII 3a B.cereus 3a (FRI41) [Food Research Institute, University of Wisconsin-Madison] USA, Wisconsin, Madison clusterIII AFS018451 B.toyonensis AFS018451 Plant, Soybean core (2014) USA, Iowa clusterV MOD1Bc230 B.cereus MOD1 Bc230 Food, food product (2016) USA, Maryland unclustered AFS017947 B.cereus AFS017947 Plant, core (2014) USA, North Carolina clusterIV AFS024266 B.thuringiensis AFS024266 Plant, core (2014) USA, North Carolina clusterIV A0389#2 B.anthracis A0389 (K1938, 89, A0389#2) [pXO1+/pXO2+; two complete genomes sequenced for this strain with different MLST sequences; strain sequenced by Biosurveillance, MRIGlobal, Palm Bay, Florida, USA; sequences conflicting with isolate A0389#1] Indonesia, West Java, Bekasi clusterIII AFS022064 B.thuringiensis AFS022064 Plant, Corn root (2014) USA, Iowa clusterIV AFS006923 B.thuringiensis AFS006923 Soil (2014) USA, North Carolina clusterIV MOD1Bc80 B.cereus MOD1 Bc80 Food, Whole Black Pepper (2015) USA, Maryland clusterIII AFS071466 B.wiedmannii AFS071466 Plant, Corn core (2014) USA, Illinois clusterII DE0015 B.cereus DE0015 clusterIV DE0443 B.tropicus DE0443 clusterIII SA047 B.anthracis SA047 Soil (1999) South Africa, Cape Town, Rondebusch clusterIII 0711P9-1 B.mobilis type strain 0711P9-1 (MCCC1A05942, KCTC33717, LMG28877) Other, sediments (2007) Indian Ocean clusterII AFS023096 B.thuringiensis AFS023096 Plant, Soybean leaf (2014) USA, Minnesota clusterIV AFS039482 B.cereus AFS039482 Soil (2014) USA, New York clusterVI 2000031039 B.anthracis 2000031039 Animal, cattle (1957) clusterIII AFS089732 B.thuringiensis AFS089732 Plant, Corn core (2014) USA, Illinois clusterIV AFS092115 B.pseudomycoides AFS092115 Plant, Corn core (2014) USA, Illinois clusterI PE5-132 B.cereus PE5-132 Animal, marine sponge (Waltherarndtia caliculatum) (2013) South Africa, Algoa Bay, White Sands Reef, Indian Ocean, Port Elizabeth clusterIII 4049 B.nitratireducens type strain 4049 (MCCC1A00732, KCTC33713, LMG28871) Other, sediments (2001) Pacific Ocean clusterVI BAG5X12-1 B.c_group BAG5X12-1 Soil USA, Massachusetts, Boston unclustered AFS024540 B.cereus AFS024540 Soil (2014) USA, Iowa clusterIV MOD1Bc187 B.cereus MOD1 Bc187 Human, Baby Wipes (2016) USA, Maryland clusterIII AFS033081 B.cereus AFS033081 Animal, Insect, beetle (2013) USA, North Carolina clusterIV AFS030140 B.cereus AFS030140 Plant, Weed plant (2014) USA, Indiana unclustered 8A B.cereus 8A Soil (2001) Brazil, Santana hill in Porto Alegre unclustered AFS072284 B.wiedmannii AFS072284 Plant, Soybean leaf (2014) USA, Illinois clusterII FSLM7-0938 B.wiedmannii FSL M7-0938 Dairy products, raw milk (2011) USA, New York clusterII PR07 B.anthracis PR07 USA clusterIII AM65-52 B.thuringiensis israelensis AM65-52 (2014) France clusterIV AFS061181 B.wiedmannii AFS061181 Plant, Soybean core (2014) USA, Iowa clusterII T07005 B.thuringiensis aizawai T07005 clusterIV AFS086947 B.cereus AFS086947 Plant, Corn core (2014) USA, Illinois clusterVI PG17 B.albus PG 17 Other, phosphogypsum piles (2018) Tunisia, Gafsa clusterII AFS064408 B.wiedmannii AFS064408 Other, excrement (2014) USA, Iowa clusterII AFS010823 B.thuringiensis AFS010823 Plant, Soybean leaf (2014) USA, Iowa unclustered AFS013685 B.cereus AFS013685 Plant, Corn core (2014) USA, North Carolina clusterIV AFS086460 B.wiedmannii AFS086460 Soil (2014) USA, New York clusterII MOD1Bc61 B.cereus MOD1 Bc61 Human, Baby Wipes (2016) USA, Maryland clusterIII BGSC4Z1 B.thuringiensis ostriniae HD501 (BGSC4Z1, AH449) (1975) China clusterIV AFS070292 B.cereus AFS070292 Soil (2014) USA, New York clusterVI AFS029810 B.cereus AFS029810 Plant, Soybean root (2014) USA, Minnesota clusterIV AFS031814 B.thuringiensis AFS031814 Soil (2014) USA, New York clusterIV AFS076729 B.cereus AFS076729 Plant, Corn core (2014) USA, North Carolina clusterIV BAG1O-2 B.c_group BAG1O-2 Soil USA, Massachusetts, Boston clusterV AFS058374 B.pseudomycoides AFS058374 Plant, Soybean core (2014) USA, Iowa unclustered STI-1 B.anthracis STI-1 [vaccine strain; pXO1+/pXO2-] Russia clusterIII Florida B.anthracis Ames Florida (A2012) Human [from bioterror mailing attacks in 2001; pXO1+/pXO2+] USA, Florida clusterIII FSLR5-0708 B.mycoides FSL R5-0708 Dairy products, pasteurized milk (2006) USA clusterVI AFS081153 B.cereus AFS081153 Food, Mushroom (2013) USA, Iowa clusterIV MOD1Bc174 B.cereus MOD1 Bc174 Food, Hybrid Tilapia (2007) USA, Maryland clusterIV VD184 B.cereus VD184 clusterIV AFS053027 B.cereus AFS053027 Plant, Soybean leaf (2014) USA, Minnesota clusterIV BGSC4H1 B.thuringiensis canadensis HD30 (BGSC4H1, CCEB566, DSM6107, Dch-T) Animal, Insect, Prominent moth (Notodonta aniera) Czechoslovakia or USSR clusterIII AFS003289 B.cereus AFS003289 Plant, Corn core (2014) USA, North Carolina clusterIV FSLM7-0109 B.mycoides FSL M7-0109 Dairy products, raw milk (2011) USA clusterVI K1129 B.anthracis K1129 Animal, goat hair (1995) Pakistan clusterIII BGSC4BN1 B.thuringiensis xiaguangiensis BGSC4BN1 (T51001, 3397) Food, beans China unclustered GOE13 B.weihenstephanensis GOE13 Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014) Germany, Goettingen clusterVI AFS043516 B.toyonensis AFS043516 Plant, Weed leaf (2014) USA, Indiana clusterV AH603 B.c_group AH603 Dairy Norway, Gjoevik clusterVI AFS026256 B.toyonensis AFS026256 Plant, Soybean leaf (2014) USA, Minnesota clusterV VD214 B.c_group VD214 Other, Water UK, Scotland clusterV AFS044782 B.toyonensis AFS044782 Plant, Soybean leaf (2014) USA, Iowa clusterV AFS056582 B.cereus AFS056582 Soil (2014) USA, New York clusterVI AFS097295 B.toyonensis AFS097295 Plant, Corn core (2014) USA, Illinois clusterV AFS048989 B.cereus AFS048989 Plant, Soybean core (2014) USA, Iowa clusterIV AFS092789 B.cereus AFS092789 Plant, Corn core (2014) USA, North Carolina clusterIV AFS097065 B.toyonensis AFS097065 Plant, Corn root (2014) USA, Iowa clusterV AFS099505 B.thuringiensis AFS099505 Plant, Soybean core (2014) USA, Iowa clusterIV HZBCE-10 B.cereus HZBCE-10 Food, pork (2015) China, Hangzhou clusterIII FSLK6-0042 B.pseudomycoides FSL K6-0042 Dairy products, raw milk (2012) USA, New York unclustered AFS043499 B.thuringiensis AFS043499 Plant, Soybean root (2013) USA, Minnesota clusterIV AFS000087 B.toyonensis AFS000087 Soil (2013) USA, North Carolina clusterV Tangail-1 B.anthracis Tangail-1 Soil (2012) Bangladesh, Tangail clusterIII A16/LA896 B.anthracis A16/LA896 Animal, cattle (bovine) (Bos primigenius taurus) (1970) Switzerland clusterIII AFS030095 B.thuringiensis AFS030095 Plant, Soybean root (2014) USA, Minnesota clusterIV IBL200 B.thuringiensis IBL200 Human, healthy human hand (1985) [israelensis-like serovar; bears Photorhabdus/Yersinia-like toxin genes] USA, Maryland clusterIV MB.20 B.cereus MB.20 Food (2014) Germany, Munich clusterIII AFS014496 B.toyonensis AFS014496 Soil (2014) USA, North Carolina clusterV PR10-4 B.anthracis PR10-4 USA clusterIII MCCC1A01412 B.anthracis MCCC1A01412 (L19) Other, sediment (2002) [two complete genomes sequenced for this strain with identical MLST sequences] China, South China Sea clusterIII AFS016024 B.anthracis AFS016024 Soil (2014) USA, North Carolina clusterIII AFS026137 B.toyonensis AFS026137 Plant, Soybean core (2014) USA, Iowa clusterV BGSC4X1 B.thuringiensis colmeri BGSC4X1 (1984) unclustered AFS005011 B.thuringiensis AFS005011 Plant, Weed plant (2014) USA, Indiana clusterIV AFS053592 B.cereus AFS053592 Plant, core (2014) USA, North Carolina clusterVI AFS016726 B.cereus AFS016726 Soil (2014) USA, Iowa clusterVI FSLR5-0811 B.cereus FSL R5-0811 Dairy products, pasteurized milk (2006) USA unclustered 2000032968 B.anthracis 2000032968 clusterIII GBSC29 B.wiedmannii GBSC29 Soil (2005) China, Tibet clusterII Kafkas-86 B.anthracis Kafkas-86 Animal, Cattle (2006) Turkey, Kars clusterIII AFS006689 B.thuringiensis AFS006689 Plant, Soybean leaf (2014) USA, Minnesota clusterIV KC2011 B.anthracis KC2011 Animal, Cheetah (Acinonyx jubatus) (2011) South Africa, Hoedspruit clusterIII AFS057244 B.thuringiensis AFS057244 Soil (2014) USA, New York clusterIV AFS017127 B.wiedmannii AFS017127 Plant, core (2014) USA, North C