strain description source location cluster typing data AFS094706 B.thuringiensis AFS094706 (2014) USA, Iowa clusterIV CS,H,K,P,TH 16-00195 B.cereus 16-00195 clusterIII CS,H,K,P,TH AFS080536 B.cereus AFS080536 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS067103 B.cereus AFS067103 Plant, Corn core (2014) USA, North Carolina clusterIII CS,H,K,P,TH DE0443 B.tropicus DE0443 clusterIII CS,H,K,P,TH AFS042863 B.cereus AFS042863 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH NRRLB-23152 B.thuringiensis malayensis NRRLB-23152 Animal, Insect, Isoptera (2013) UK clusterIII CS,H,K,P,TH MGYG-HGUT-02283 B.cereus MGYG-HGUT-02283 clusterIII CS,H,K,P,TH VDM021 B.c_group VDM021 Soil Greenland conflicting CS,H,K,P,TH AFS059517 B.thuringiensis AFS059517 Plant, Corn grain bin dust (2013) USA, Iowa clusterIV CS,H,K,P,TH 6113 B.cereus 6113 Human, vomit (2016) China clusterIII CS,H,K,P,TH BGSC4A3 B.thuringiensis thuringiensis BGSC4A3 Animal, Insect, silkworm (Bombyx mori) (2013) UK clusterIV CS,H,K,P,TH AFS093149 B.anthracis AFS093149 Plant, Weed core (2014) USA, North Carolina clusterIII CS,H,K,P,TH AFS048966 B.cereus AFS048966 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH T0139 B.thuringiensis T0139 Soil (2015) Brazil, Tocantins State clusterIV CS,H,K,P,TH Sterne B.anthracis Sterne [pXO1+/pXO2-; two complete genomes sequenced for this strain with identical MLST sequences] USA clusterIII CS,H,K,P,TH,AFLP1 AFS057502 B.cereus AFS057502 Plant, core (2014) USA, North Carolina conflicting CS,H,K,P,TH AFS007170 B.cereus AFS007170 Plant, Corn core (2014) USA, Illinois conflicting CS,H,K,P,TH AFS037377 B.anthracis AFS037377 Plant, core (2014) USA, North Carolina clusterIII CS,H,K,P,TH AFS079281 B.cereus AFS079281 Plant, Corn core (2014) USA, Illinois clusterVI CS,H,K,P,TH GOE3#1 B.thuringiensis GOE3#1 Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014) Germany, Goettingen clusterIV CS,H,K,P,TH AFS076352 B.cereus AFS076352 Soil (2014) USA, New York clusterVI CS,H,K,P,TH DSM11821 B.weihenstephanensis type strain WSBC10204 (DSM11821, AH1145, KB008, NBRC101238) Dairy products, pasteurized milk (1992) [from the same dairy as isolates WSBC10028, WSBC10029, WSBC10030, WSBC10031, WSBC10042, WSBC10201, WSBC10205, WSBC10206, WSBC10208, and WSBC10211; two complete genomes sequenced for this strain with identical MLST sequences; sequences conflicting with isolate WSBC10204] clusterVI CS,H,K,P,TH,AFLP3,MLEE AFS007599 B.cereus AFS007599 Soil (2014) USA, New York conflicting CS,H,K,P,TH AFS048537 B.pseudomycoides AFS048537 Plant, Soybean core (2014) USA, Iowa clusterI CS,H,K,P,TH AFS079942 B.cereus AFS079942 Plant, Corn root (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS008599 B.pseudomycoides AFS008599 Soil (2014) USA, Iowa clusterI CS,H,K,P,TH 1230 B.thuringiensis 1230 USA, Nebraska clusterIV CS,H,K,P,TH IMSNU12096 B.thuringiensis dendrolimus IMSNU12096 (KCTC1514) clusterIV K AFS095084 B.cereus AFS095084 Plant, Soybean root (2014) USA, Iowa conflicting CS,H,K,P,TH IMSNU12095 B.thuringiensis IMSNU12095 (KCTC1513) clusterIII K AFS072097 B.cereus AFS072097 Plant, Tomato plant (2014) USA, North Carolina conflicting CS,H,K,P,TH M13 B.cereus M13 Food, Korean fermented food (2016) South Korea clusterIV CS,H,K,P,TH NCTC6474 B.cereus NCTC6474 clusterIV CS,H,K,P,TH I186 B.mycoides I186 Plant, Grass (2017) Israel, Karie Deshe clusterVI CS,H,K,P,TH AFS015413 B.thuringiensis AFS015413 Plant, Corn grain bin dust (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS023251 B.wiedmannii AFS023251 Plant, Soybean core (2014) USA, Iowa clusterII CS,H,K,P,TH VD169 B.c_group VD169 Soil UAE, Dubai conflicting CS,H,K,P,TH FSLM7-1219 B.cereus FSL M7-1219 Dairy products, raw milk (2011) USA clusterVI CS,H,K,P,TH 822BCER B.cereus 822 BCER Human USA, Washington clusterIV CS,H,K,P,TH AFS085075 B.cereus AFS085075 Soil (2014) USA, New York clusterVI CS,H,K,P,TH MOD1Bc178 B.cereus MOD1 Bc178 Human, Baby Wipes (2016) USA, Maryland clusterIII CS,H,K,P,TH AFS054612 B.pseudomycoides AFS054612 Plant, Corn root (2014) USA, Iowa conflicting CS,H,K,P,TH ZBG4 B.thuringiensis ZBG4 Soil (2014) France, Zellenberg clusterV CS,H,K,P,TH LK9 B.cereus LK9 (2010) Malaysia, Malacca clusterIV CS,H,K,P,TH AFS095548 B.cereus AFS095548 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH BAG3X2-1 B.c_group BAG3X2-1 Soil USA, Massachusetts, Boston clusterVI CS,H,K,P,TH AFS042343 B.cereus AFS042343 Plant, Corn grain bin dust (2013) USA, Iowa clusterII CS,H,K,P,TH BGSC4CC1 B.thuringiensis pulsiensis BGSC4CC1 (T65001, AH1357, NARC Bt17) Soil, grain field Pakistan clusterIII CS,H,K,P,TH,AFLP3 BAG3O-1 B.c_group BAG3O-1 Soil USA, Massachusetts, Boston clusterII CS,H,K,P,TH AFS049531 B.pseudomycoides AFS049531 Soil (2014) USA, Iowa conflicting CS,H,K,P,TH AFS016611 B.thuringiensis AFS016611 Plant, Soybean leaf (2014) USA, Minnesota clusterIV CS,H,K,P,TH OhioACB B.anthracis Ohio ACB Animal, pig [pXO1+/pXO2+] USA, Ohio clusterIII CS,H,K,P,TH SJ-S19 B.cereus SJ-S19 Human USA, Tennessee, Memphis clusterIV CS,H,K,P,TH Canadian_bison B.anthracis Canadian_bison Animal, Bison [pXO1+/pXO2+] Canada clusterIII CS,H,K,P,TH BAC3151 B.toyonensis BAC3151 Plant, bean (Phaseolus vulgaris) leaves (2007) Brazil, Minas Gerais, Coimbra clusterV CS,H,K,P,TH kn11 B.thuringiensis kn11 Soil (2017) China, Hebei clusterIV CS,H,K,P,TH G9241#1 B.cereus G9241 (2000031673, B06_002, G9241#1) Human, sputum and blood (1994) [human pneumonia; carries pXO1 plasmid with anthrax virulence genes and produces a polysaccharide capsule; two complete genomes sequenced for this strain with identical MLST sequences] USA, Louisiana clusterIII CS,H,K,P,TH AFS045876 B.thuringiensis AFS045876 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH MOD1Bc119 B.cereus MOD1 Bc119 Food, Whole Black Pepper (2015) USA, Maryland clusterIII CS,H,K,P,TH FSLK6-0073 B.cereus FSL K6-0073 Dairy products, Laboratory Heat Treated Raw Milk (2012) USA, New York clusterIV CS,H,K,P,TH AFS039999 B.thuringiensis AFS039999 Plant, Corn root (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS044880 B.cereus AFS044880 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH BtB2-4 B.weihenstephanensis BtB2-4 Soil, forest soil mud [emetic toxin/cereulide producer] Belgium clusterVI CS,H,K,P,TH K0021 B.anthracis K0021 Animal, Sheep (1995) Italy clusterIII CS,H,K,P,TH AFS033534 B.toyonensis AFS033534 Plant, Soybean leaf (2014) USA, Iowa clusterV CS,H,K,P,TH AFS081508 B.cereus AFS081508 Plant, core (2014) USA, North Carolina clusterVI CS,H,K,P,TH I147 B.cereus I147 Plant, Grass (2017) Israel, Karie Deshe clusterIV CS,H,K,P,TH AFS056801 B.pseudomycoides AFS056801 Soil (2014) USA, Iowa conflicting CS,H,K,P,TH DAR81934#2 B.thuringiensis DAR81934 (DAR81934#2) [exhibits molluscicidal activity toward the pest snail Cernuella virgata; two complete genomes sequenced for this strain with different MLST sequences; strain sequenced by Joint Genome Institute, Walnut Creek, California, USA; sequences conflicting with isolate DAR81934#1] Australia, Port Campbell National Park clusterIV CS,H,K,P,TH KB1 B.thuringiensis KB1 Plant, thale cress (Arabidopsis thaliana) apoplast (2012) South Korea, Daejeon clusterIII CS,H,K,P,TH AFS059960 B.cereus AFS059960 Plant, Corn core (2014) USA, North Carolina conflicting CS,H,K,P,TH AFS003709 B.toyonensis AFS003709 Plant, Soybean core (2014) USA, Iowa clusterV CS,H,K,P,TH AFS090123 B.cereus AFS090123 Plant, Corn plant (2014) USA, North Carolina clusterIV CS,H,K,P,TH DE0332 B.thuringiensis DE0332 clusterIV CS,H,K,P,TH S2E19 B.mycoides S2E19 Soil (2016) Netherlands clusterVI CS,H,K,P,TH AFS024711 B.wiedmannii AFS024711 Plant, Corn core (2014) USA, Illinois clusterII CS,H,K,P,TH BGSC4BJ1 B.thuringiensis wratislaviensis BGSC4BJ1 Soil Poland clusterII CS,H,K,P,TH AFS058374 B.pseudomycoides AFS058374 Plant, Soybean core (2014) USA, Iowa conflicting CS,H,K,P,TH INRA5 B.weihenstephanensis INRA5 clusterVI CS,H,K,P,TH,AFLP3 AFS075404 B.toyonensis AFS075404 Plant, Soybean root (2013) USA, Minnesota clusterV CS,H,K,P,TH MOD1Bc216 B.cereus MOD1 Bc216 Human, Baby Wipes (2016) USA, Maryland clusterIII CS,H,K,P,TH AFS099758 B.cereus AFS099758 Plant, Corn (2014) USA, North Carolina clusterIII CS,H,K,P,TH LCT-BC25 B.cereus LCT-BC25 Other, culture sent to space aboard the Shenzhou-8 spacecraft; isolated after space flight clusterIII CS,H,K,P,TH ATCC14186 B.anthracis ATCC14186 [pXO1+/pXO2-] clusterIII K,P AFS004017 B.wiedmannii AFS004017 Plant, Soybean leaf (2014) USA, Minnesota clusterII CS,H,K,P,TH 16-00175 B.cereus 16-00175 clusterIII CS,H,K,P,TH AFS042006 B.cereus AFS042006 Plant, Corn core (2014) USA, North Carolina conflicting CS,H,K,P,TH Leapi01 B.thuringiensis aizawai Leapi01 Animal, Insect, Loreyi Leafworm/Cosmopolitan (Mythimna loreyi/Leucania loreyi) dead larva Spain clusterIV CS,H,K,P,TH A1039 B.anthracis A1039 Animal, cattle (1999) Bolivia, Santa Cruz clusterIII CS,H,K,P,TH RIVMBC126#2 B.wiedmannii RIVMBC126 (RIVMBC126#2) Human, faeces/stools (1999) [diarrheal food poisoning; two complete genomes sequenced for this strain with different MLST sequences; strain sequenced by Lehrstuhl fuer Mikrobielle Oekologie, Technische Universitaet Muenchen, Freising, Germany; sequences conflicting with isolate RIVMBC126#1] Netherlands clusterII CS,H,K,P,TH MOD1Bc135 B.cereus MOD1 Bc135 Food, Dietary Supplements (2015) USA, Maryland clusterIII CS,H,K,P,TH AFS090953 B.toyonensis AFS090953 (2014) USA, North Carolina clusterV CS,H,K,P,TH AFS080777 B.wiedmannii AFS080777 Plant, Soybean leaf (2014) USA, Minnesota clusterII CS,H,K,P,TH AFS083741 B.cereus AFS083741 Soil (2014) USA, North Carolina conflicting CS,H,K,P,TH AFS050550 B.thuringiensis AFS050550 Plant, Soybean leaf (2014) USA, Minnesota clusterIV CS,H,K,P,TH MOD1Bc210 B.cereus MOD1 Bc210 Human, Baby Wipes (2016) USA, Maryland clusterIII CS,H,K,P,TH FSLK6-0067 B.cereus FSL K6-0067 Dairy products, Laboratory Heat Treated Raw Milk (2012) USA, New York clusterIII CS,H,K,P,TH Sen3 B.anthracis Sen3 Senegal clusterIII CS,H,K,P,TH BGSC4AP1 B.thuringiensis fukuokaensis BGSC4AP1 (1989) Japan clusterIV CS,H,K,P,TH AFS065666 B.thuringiensis AFS065666 Soil (2014) USA, New York clusterIV CS,H,K,P,TH NBIN-866 B.thuringiensis NBIN-866 Soil China, Hubei Province clusterIV CS,H,K,P,TH AFS055708 B.thuringiensis AFS055708 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS035137 B.pseudomycoides AFS035137 Plant, Corn root (2014) USA, Iowa conflicting CS,H,K,P,TH 1000305 B.cereus 1000305 Other, Young radish kimchi (2014) South Korea, Seoul conflicting CS,H,K,P,TH CNEVA B.anthracis CNEVA 9066 (A0402, K1887) Human [pXO1+/pXO2+] France (Southern) clusterIII CS,H,K,P,TH STI-1 B.anthracis STI-1 [vaccine strain; pXO1+/pXO2-] Russia clusterIII CS,H,K,P,TH AFS072350 B.cereus AFS072350 Plant, Soybean leaf (2013) USA, Minnesota clusterIV CS,H,K,P,TH AFS034791 B.cereus AFS034791 Plant, Soybean leaf (2013) USA, Minnesota conflicting CS,H,K,P,TH FSLH8-0534 B.pseudomycoides FSL H8-0534 Soil (2006) [soil adjacent to bovine farm] USA clusterI CS,H,K,P,TH F4430/73 B.cereus B-4ac (F4430/73, DSM4384, B4ac) Other, pea soup or faeces/stools (1973) [diarrheal food poisoning outbreak] Belgium clusterIV CS,H,K,P,TH,AFLP2,AFLP3 AFS000175 B.cereus AFS000175 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH B-2012 B.thuringiensis B-2012 Other, Sediments (2002) Pacific Ocean clusterIV CS,H,K,P,TH AFS019758 B.thuringiensis AFS019758 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH G1-1 B.cereus G1-1 clusterIV CS,H,K,P,TH AFS070662 B.cereus AFS070662 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH 910BCER B.cereus 910 BCER Human USA, Washington clusterIII CS,H,K,P,TH 2000031039 B.anthracis 2000031039 Animal, cattle (1957) clusterIII CS,H,K,P,TH AFS044520 B.cereus AFS044520 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH KCTC1014 B.cereus KCTC1014 (ATCC21768) Animal, chicken and turkey manure [data from Ko et al. 2004, Infect. Immunity 72, 5253-5261; sequences conflicting with isolate IMSNU12078] clusterIII K,P AFS075012 B.cereus AFS075012 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH EB422 B.pacificus type strain EB422 (MCCC1A06182, KCTC33858) Other, seawater (2007) Pacific Ocean clusterIII CS,H,K,P,TH AFS001991 B.thuringiensis AFS001991 Plant, Corn leaf (2014) USA, Illinois clusterIV CS,H,K,P,TH DE0364 B.nitratireducens DE0364 clusterVI CS,H,K,P,TH BS16 B.cereus BS16 clusterIV CS,H,K,P,TH BGSC4G1 B.thuringiensis galleriae BGSC4G1 (HD8) Animal, Insect, Greater Wax Moth/Honeycomb Moth (Galleria mellonella) (1958) USSR clusterIV CS,H,K,P,TH BGSC4BW1 B.thuringiensis iberica BGSC4BW1 Spain clusterIV CS,H,K,P,TH VD131 B.c_group VD131 Soil Martinique clusterV CS,H,K,P,TH GM5LP B.mycoides GM5LP Plant, English ray-grass (Lolium perenne) Germany clusterVI CS,H,K,P,TH MOD1Bc182 B.cereus MOD1 Bc182 Human, Baby Wipes (2016) USA, Maryland clusterIII CS,H,K,P,TH AFS002920 B.thuringiensis AFS002920 Plant, Soybean seed (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS070352 B.toyonensis AFS070352 Plant, Soybean leaf (2014) USA, Iowa clusterV CS,H,K,P,TH HS18-1 B.thuringiensis HS18-1 Soil (2009) China, Sichuan Province conflicting CS,H,K,P,TH AFS023730 B.cereus AFS023730 Plant, core (2014) USA, North Carolina conflicting CS,H,K,P,TH SJ-S29 B.cereus SJ-S29 Human USA, Tennessee, Memphis clusterIV CS,H,K,P,TH MOD1Bc192 B.cereus MOD1 Bc192 Human, Baby Wipes (2016) USA, Maryland clusterIII CS,H,K,P,TH DPC6431 B.thuringiensis DPC6431 Human, faeces/stools (2008) Ireland clusterIII CS,H,K,P,TH AFS089732 B.thuringiensis AFS089732 Plant, Corn core (2014) USA, Illinois clusterIV CS,H,K,P,TH AFS095804 B.toyonensis AFS095804 Plant, Corn core (2014) USA, Illinois clusterV CS,H,K,P,TH I5 B.wiedmannii I5 Soil, quaking grass (Briza maxima) undisturbed soil (2016) Israel, Ramat HaNadiv clusterII CS,H,K,P,TH AFS001368 B.toyonensis AFS001368 Plant, Soybean core (2014) USA, Iowa clusterV CS,H,K,P,TH AFS030961 B.thuringiensis AFS030961 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH BGSC4J5 B.thuringiensis aizawai BGSC4J5 Animal, Insect, Indian meal moth (Plodia interpunctella) UK, England clusterIV CS,H,K,P,TH I69 B.cereus I69 Plant, Grass (2017) Israel, Ramat HaNadiv conflicting CS,H,K,P,TH AFS071554 B.cereus AFS071554 (2014) USA, North Carolina clusterII CS,H,K,P,TH AFS012400 B.cereus AFS012400 Plant, Cucumber plant (2014) USA, North Carolina clusterIV CS,H,K,P,TH T01001 B.thuringiensis thuringiensis T01001 (BGSC4A3, HD2, DSM6029) Animal, Insect, Mediterranean flour moth/mill moth (Ephestia kuhniella/Anagasta kuehniella) (1958) [sequences conflicting with isolate AH840] Canada clusterIV CS,H,K,P,TH,AFLP3 AFS017202 B.cereus AFS017202 Plant, Corn root (2014) USA, Iowa clusterVI CS,H,K,P,TH AFS071669 B.toyonensis AFS071669 Plant, Corn core (2014) USA, Illinois clusterV CS,H,K,P,TH Sbt003 B.thuringiensis Sbt003 Soil (2010) China, Hubei Province clusterIV CS,H,K,P,TH MB.18 B.cereus MB.18 Food (2014) Germany, Munich clusterIII CS,H,K,P,TH PE8-121b B.cereus PE8-121b Animal, marine sponge (Spongia sp.) (2013) South Africa, Algoa Bay, White Sands Reef, Indian Ocean, Port Elizabeth clusterIII CS,H,K,P,TH H9401 B.anthracis H9401 Human, cutaneous anthrax patient [pXO1+/pXO2+] South Korea clusterIII CS,H,K,P,TH AFS010823 B.thuringiensis AFS010823 Plant, Soybean leaf (2014) USA, Iowa conflicting CS,H,K,P,TH B4118 B.cereus B4118 Food (2013) Netherlands clusterIV CS,H,K,P,TH AFS020887 B.anthracis AFS020887 Plant, Corn core (2014) USA, Illinois clusterIII CS,H,K,P,TH AFS029692 B.wiedmannii AFS029692 Plant, core (2014) USA, North Carolina clusterII CS,H,K,P,TH AFS089607 B.toyonensis AFS089607 Plant, Corn root (2014) USA, Iowa clusterV CS,H,K,P,TH AFS079194 B.cereus AFS079194 Plant, core (2014) USA, North Carolina clusterVI CS,H,K,P,TH HD12 B.thuringiensis HD12 Soil (2012) USA clusterIV CS,H,K,P,TH ISP3191 B.c_group ISP3191 Food clusterIII CS,H,K,P,TH AFS041497 B.cereus AFS041497 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH CITVM-11.1 B.cereus CITVM-11.1 Soil (2014) Argentina, Cordoba, Oncativo conflicting CS,H,K,P,TH AFS030046 B.cereus AFS030046 Plant, Soybean root (2014) USA, Minnesota conflicting CS,H,K,P,TH AFS005083 B.thuringiensis AFS005083 Plant, leaf (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS058668 B.pseudomycoides AFS058668 Soil (2014) USA, North Carolina clusterI CS,H,K,P,TH FSLH7-687 B.weihenstephanensis FSL H7-687 Dairy products, pasteurized milk (2005) USA clusterVI CS,H,K,P,TH Bt185 B.thuringiensis 185 (Bt185) Soil (2002) China clusterIV CS,H,K,P,TH AFS028351 B.cereus AFS028351 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS009781 B.cereus AFS009781 Soil (2014) USA, New York clusterII CS,H,K,P,TH ATCC10876 B.cereus ATCC10876 (569, AH181, IMSNU13045, NRRLB-569, NCTC7464, KCTC1092) Other, contaminated flask (1945) [well-studied strain used in many structural studies of the spore and exospore] clusterIV CS,H,K,P,TH AFS077622 B.toyonensis AFS077622 Plant, Soybean core (2014) USA, Iowa clusterV CS,H,K,P,TH AFS064137 B.thuringiensis AFS064137 Soil (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS088703 B.pseudomycoides AFS088703 Plant, Soybean core (2014) USA, Iowa conflicting CS,H,K,P,TH MSX-A12 B.c_group MSX-A12 clusterIII CS,H,K,P,TH MS735 B.toyonensis MS735 Food, Mixed salad (2015) Germany, Kiel clusterV CS,H,K,P,TH F837/76 B.cereus F837/76 (AH188, KBBI3, DSM4222) Human, wound (1976) [efficient diarrheal enterotoxin producer from prostate operation wound infection] UK clusterIII CS,H,K,P,TH,AFLP2,AFLP3 KS100Bc B.cereus KS100Bc Food service operation (2014) South Korea, Gyeonggi-do clusterIII CS,H,K,P,TH AFS059039 B.thuringiensis AFS059039 Soil (2014) USA, North Carolina clusterIV CS,H,K,P,TH 2000031052 B.anthracis 2000031052 Animal, cattle (1956) USA, Wyoming clusterIII CS,H,K,P,TH AFS061653 B.thuringiensis AFS061653 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS098170 B.cereus AFS098170 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS002368 B.cereus AFS002368 Plant, Tomato plant (2014) USA, North Carolina conflicting CS,H,K,P,TH AFS034126 B.thuringiensis AFS034126 Plant, Corn core (2014) USA, Illinois clusterIV CS,H,K,P,TH AFS018356 B.pseudomycoides AFS018356 Plant, Corn core (2014) USA, Illinois clusterI CS,H,K,P,TH AFS074290 B.pseudomycoides AFS074290 Plant, Soybean leaf (2014) USA, Minnesota conflicting CS,H,K,P,TH AFS033388 B.cereus AFS033388 Soil (2014) USA, New York clusterVI CS,H,K,P,TH tsu1 B.cereus tsu1 Other, contaminated cellulose-agar plate (2009) USA, Tennessee, Nashville clusterIV CS,H,K,P,TH AFS092115 B.pseudomycoides AFS092115 Plant, Corn core (2014) USA, Illinois clusterI CS,H,K,P,TH PG1 B.albus PG 1 Other, phosphogypsum piles (2018) Tunisia, Gafsa clusterII CS,H,K,P,TH RIVMBC485 B.cereus RIVMBC485 (KAL285) (2001) clusterII CS,H,K,P,TH,AFLP3 HZBCE-09 B.cereus HZBCE-09 Food, pork (2015) China, Hangzhou clusterIII CS,H,K,P,TH B4077 B.cereus B4077 Food, chilled dessert (2012) Netherlands clusterII CS,H,K,P,TH AFS005977 B.cereus AFS005977 Soil (2014) USA, New York clusterVI CS,H,K,P,TH BDRD-ST196 B.cereus BDRD-ST196 [Biological Defense Research Directorate (BDRD)] USA, Maryland, Rockville clusterVI CS,H,K,P,TH AFS076729 B.cereus AFS076729 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH MROC2 B.cereus MROC2 Animal, Chicken/Red junglefowl (Gallus gallus) faeces/stools (2010) USA, California, Fresno County conflicting CS,H,K,P,TH AFS006012 B.cereus AFS006012 Plant, Corn core (2014) USA, North Carolina conflicting CS,H,K,P,TH AFS081123 B.wiedmannii AFS081123 Plant, Corn core (2014) USA, Illinois clusterII CS,H,K,P,TH 25#1 B.cereus 25 (25#1) Animal, crab (Ucides sp.) gastrointestinal tract (2016) Brazil, Ceara, Pacoti River, Fortaleza clusterIV CS,H,K,P,TH AFS018179 B.thuringiensis AFS018179 Plant, Corn grain bin dust (2013) USA, Iowa clusterIV CS,H,K,P,TH AFS096719 B.thuringiensis AFS096719 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS081469 B.cereus AFS081469 Plant, Corn core (2014) USA, Illinois clusterIV CS,H,K,P,TH A16R B.anthracis A16R [attenuated variant of strain A16; pXO1+/pXO2-] clusterIII CS,H,K,P,TH BAG5X12-1 B.c_group BAG5X12-1 Soil USA, Massachusetts, Boston conflicting CS,H,K,P,TH BGSC4J1 B.thuringiensis aizawai/pacificus HD112 (BGSC4J1, DD-742, 147) Animal, Insect, Oriental Tobacco Budworm/Cape Gooseberry Budworm (Heliothis assulta/Helicoverpa assulta) Japan clusterIV CS,H,K,P,TH HD29 B.thuringiensis galleriae galleriae HD29 (AH445, BGSC4G5, CCEB565, DSM6110) Animal, Insect, Siberian moth (Dendrolimus sibiricus) Czechoslovakia or USSR clusterIV CS,H,K,P,TH,AFLP2 AFS083298 B.toyonensis AFS083298 Plant, Soybean core (2014) USA, Iowa clusterV CS,H,K,P,TH AFS009411 B.cereus AFS009411 Plant, Soybean root (2014) USA, Missouri clusterIV CS,H,K,P,TH AFS052321 B.cereus AFS052321 Soil (2014) USA, New York clusterVI CS,H,K,P,TH 2017H2G2 B.wiedmannii 2017H2G2 Soil (2017) Denmark, Aarhus clusterII CS,H,K,P,TH Ba-8784/92-Geo B.anthracis Ba-8784/92-Geo Food, Beef (1992) Georgia clusterIII CS,H,K,P,TH AFS055486 B.cereus AFS055486 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH A155 B.anthracis A155 Soil (2007) Germany, Neumuenster clusterIII CS,H,K,P,TH DDD103 B.cereus DDD103 Soil (2017) China clusterIV CS,H,K,P,TH AFS053592 B.cereus AFS053592 Plant, core (2014) USA, North Carolina clusterVI CS,H,K,P,TH AFS026201 B.toyonensis AFS026201 Plant, Soybean leaf (2014) USA, Minnesota clusterV CS,H,K,P,TH m1550 B.cereus m1550 (277/2, BGSC6A56) Food, uncooked chicken (1987) Brazil clusterIV CS,H,K,P,TH Mn5 B.paranthracis type strain Mn5 (MCCC1A00395, KCTC33714, LMG28873) Other, sediments (2003) Pacific Ocean clusterIII CS,H,K,P,TH BGSC4BT1#2 B.thuringiensis rongseni BGSC4BT1 (T56001, Scg04-02, BGSC4BT1#2) [two complete genomes sequenced for this strain with different MLST sequences; both genomes sequenced by State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, Hubei, China; sequences conflicting with isolate BGSC4BT1#1] China clusterIV CS,H,K,P,TH AFS081374 B.pseudomycoides AFS081374 Plant, Corn root (2014) USA, Iowa conflicting CS,H,K,P,TH BC B.anthracis BC Animal, cattle (cow) [pXO1-/pXO2+] South Korea, Bongcheon clusterIII K,P NVH0075/95 B.cereus NVH0075-95 (NVH0075/95) Food, stew with vegetables, food poisoning (1995) (1995) [diarrheal food poisoning outbreak] Norway clusterIII CS,H,K,P,TH,AFLP3 FORC087 B.cereus FORC087 Food, Chives (2016) South Korea, Seoul clusterIV CS,H,K,P,TH AFS001977 B.cereus AFS001977 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH VD140 B.c_group VD140 Soil UK, Scotland clusterIV CS,H,K,P,TH Pasteur_Standard B.thuringiensis tolworthi Pasteur Institute Standard strain (Pasteur_Standard) conflicting CS,H,K,P,TH AFS027605 B.anthracis AFS027605 Plant, Soybean core (2014) USA, Iowa clusterII CS,H,K,P,TH P4-1-5 B.cereus P4-1-5 clusterIII CS,H,K,P,TH A0389#1 B.anthracis A0389 (K1938, 89, A0389#1) [pXO1+/pXO2+; two complete genomes sequenced for this strain with different MLST sequences; strain sequenced by Los Alamos National Laboratory, Los Alamos, New Mexico, USA; sequences conflicting with isolate A0389#2] Indonesia, West Java, Bekasi clusterIII CS,H,K,P,TH GOE4#2 B.weihenstephanensis GOE4#2 Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014) Germany, Goettingen clusterVI CS,H,K,P,TH TG1-6 B.cereus TG1-6 Plant, common cord-grass (Sporobolus anglicus) China, Fujian Province, area of Zhangpu Yanchang clusterIV CS,H,K,P,TH AFS047135 B.cereus AFS047135 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH BIOML-A1 B.cereus BIOML-A1 Human, fecal material (2015) USA, Boston clusterIII CS,H,K,P,TH AFS028955 B.wiedmannii AFS028955 Plant, Soybean leaf (2014) USA, Minnesota clusterII CS,H,K,P,TH PG18 B.albus PG 18 Other, phosphogypsum piles (2018) Tunisia, Gafsa clusterII CS,H,K,P,TH NVH0391/98 B.cytotoxicus type strain NVH0391-98 (KB007, CytK, DSM22905, CIP110041, NVH0391/98) Food, Vegetable puree (1998) [diarrheal food poisoning outbreak, fatal] France, Essone clusterVII CS,H,K,P,TH,AFLP3 AFS055854 B.thuringiensis AFS055854 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH FSLW8-0520 B.cereus FSL W8-0520 Other, RO - Liquid (WIP) (2012) USA, New York clusterIII CS,H,K,P,TH AFS043211 B.thuringiensis AFS043211 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS064516 B.cereus AFS064516 Plant, Corn core (2014) USA, Illinois clusterIV CS,H,K,P,TH AFS069629 B.wiedmannii AFS069629 Plant, Soybean core (2014) USA, Iowa clusterII CS,H,K,P,TH VD022 B.c_group VD022 Other, Water from a small pond site Belgium clusterIV CS,H,K,P,TH AFS098336 B.thuringiensis AFS098336 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH FSLK6-0040 B.cereus FSL K6-0040 Dairy products, Laboratory Heat Treated Raw Milk (2012) USA, New York clusterIV CS,H,K,P,TH DE0555 B.thuringiensis DE0555 clusterII CS,H,K,P,TH DE0388 B.cereus DE0388 clusterIV CS,H,K,P,TH AFS034338 B.cereus AFS034338 Plant, Core Other Plant (2014) USA, North Carolina clusterII CS,H,K,P,TH DE0208 B.mycoides DE0208 conflicting CS,H,K,P,TH AFS009840 B.cereus AFS009840 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH 52-40-NIAH B.anthracis 52-40-NIAH Animal, horse (1940) [pXO1+/pXO2+] China clusterIII CS,H,K,P,TH AFS074533 B.cereus AFS074533 Plant, core (2014) USA, North Carolina clusterII CS,H,K,P,TH K2 B.anthracis K2 Soil (2014) Namibia, Etosha National Park clusterIII CS,H,K,P,TH GOE7#2 B.weihenstephanensis GOE7#2 Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014) Germany, Goettingen clusterVI CS,H,K,P,TH AFS074868 B.cereus AFS074868 Plant, Corn leaf (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS001949 B.pseudomycoides AFS001949 Plant, Soybean core (2014) USA, Iowa conflicting CS,H,K,P,TH AFS040159 B.pseudomycoides AFS040159 Plant, Soybean root (2014) USA, Missouri clusterI CS,H,K,P,TH AFS003289 B.cereus AFS003289 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS027869 B.cereus AFS027869 Plant, Corn core (2014) USA, Illinois conflicting CS,H,K,P,TH AFS041041 B.cereus AFS041041 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH Fcd114 B.thuringiensis Fcd114 Soil (2003) China, Hebei, Baoding clusterIV CS,H,K,P,TH AFS011848 B.thuringiensis AFS011848 Plant, Soybean core (2014) USA, Iowa conflicting CS,H,K,P,TH AFS067491 B.toyonensis AFS067491 Soil (2014) USA, North Carolina clusterV CS,H,K,P,TH Rock4-2 B.cereus Rock4-2 Soil USA, Maryland, Rockville clusterIV CS,H,K,P,TH AFS054163 B.cereus AFS054163 Plant, core (2014) USA, North Carolina conflicting CS,H,K,P,TH 2127 B.cereus 2127 clusterIII K AFS077661 B.thuringiensis AFS077661 Plant, Corn root (2014) USA, Iowa clusterIV CS,H,K,P,TH DE0304 B.toyonensis DE0304 clusterV CS,H,K,P,TH H3081.97 B.cereus H3081.97 (2002734506) Food (1997) [emetic toxin/cereulide producer; from the same food poisoning outbreak as isolates H3074.97 and H3076.97; outbreak linked to rice] USA, Texas clusterIII CS,H,K,P,TH BGSC4AK1 B.thuringiensis leesis BGSC4AK1 (1994) South Korea clusterIV CS,H,K,P,TH AFS097325 B.thuringiensis AFS097325 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH VDM022 B.c_group VDM022 Soil Greenland clusterVI CS,H,K,P,TH AFS037926 B.cereus AFS037926 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH PgBE311 B.cereus PgBE311 Plant, ginseng (Panax ginseng) (2017) clusterIV CS,H,K,P,TH AFS052902 B.cereus AFS052902 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS062328 B.toyonensis AFS062328 Plant, Soybean leaf (2014) USA, Minnesota clusterV CS,H,K,P,TH AFS073563 B.wiedmannii AFS073563 Plant, Corn grain bin dust (2013) USA, Iowa clusterII CS,H,K,P,TH MIT0214 B.cereus MIT0214 Other, Deep subsurface (2010) [isolated through enrichment of samples from geologic sequestration sites in pressurized bioreactors containing a supercritical CO2 headspace] USA, Texas clusterIV CS,H,K,P,TH AFS057244 B.thuringiensis AFS057244 Soil (2014) USA, New York clusterIV CS,H,K,P,TH AFS025457 B.cereus AFS025457 Plant, Corn leaf (2014) USA, North Carolina conflicting CS,H,K,P,TH AFS011202 B.cereus AFS011202 Plant, Soybean core (2014) USA, Iowa conflicting CS,H,K,P,TH RIVMBC964 B.cereus RIVMBC964 Food, kebab (2002) Netherlands conflicting CS,H,K,P,TH MOD1Bc80 B.cereus MOD1 Bc80 Food, Whole Black Pepper (2015) USA, Maryland clusterIII CS,H,K,P,TH AFS013997 B.cereus AFS013997 Plant, Corn core (2014) USA, North Carolina conflicting CS,H,K,P,TH AFS041167 B.pseudomycoides AFS041167 Soil (2014) USA, North Carolina conflicting CS,H,K,P,TH AFS072900 B.anthracis AFS072900 Plant, Weed core (2014) USA, North Carolina clusterIII CS,H,K,P,TH AFS067541 B.toyonensis AFS067541 Plant, Soybean leaf (2014) USA, Minnesota clusterV CS,H,K,P,TH Cvac02 B.anthracis Cvac02 Animal, dead cow blood (2013) [from the site of an anthrax outbreak] China, Liaoning Province clusterIII CS,H,K,P,TH AFS008260 B.cereus AFS008260 Plant, Corn core (2014) USA, Illinois conflicting CS,H,K,P,TH RIVMBC934 B.cereus RIVMBC934 (KAL734) (2002) Netherlands clusterIV CS,H,K,P,TH,AFLP3 HuB2-9 B.c_group HuB2-9 Soil Belgium clusterV CS,H,K,P,TH A1144 B.anthracis A1144 [pXO1+/pXO2+; shows mucoid colony morphology] Argentina clusterIII CS,H,K,P,TH T07151 B.thuringiensis aizawai T07151 clusterIV CS,H,K,P,TH FSLM7-0109 B.mycoides FSL M7-0109 Dairy products, raw milk (2011) USA clusterVI CS,H,K,P,TH AFS011189 B.pseudomycoides AFS011189 Plant, Soybean core (2014) USA, Iowa clusterI CS,H,K,P,TH CH23 B.cytotoxicus CH 23 Food, Mashed potatoes (2015) Switzerland clusterVII CS,H,K,P,TH Bti B.thuringiensis Bti Soil (2015) Brazil clusterIV CS,H,K,P,TH AFS084744 B.cereus AFS084744 Soil (2014) USA, New York clusterIV CS,H,K,P,TH VD148 B.c_group VD148 Soil UK, Scotland clusterV CS,H,K,P,TH UBA4171 B.cereus UBA4171 clusterIV CS,H,K,P,TH A0465 B.anthracis LSU465 (K2762, A0465, RA3, 6445/RA3) Animal, cattle (Cow), spleen (1997) [two complete genomes sequenced for this strain with identical MLST sequences; pXO1+/pXO2+] France, Pyrenees mountains clusterIII CS,H,K,P,TH,AFLP2 AFS043930 B.thuringiensis AFS043930 Plant, Oats (2014) USA, North Carolina conflicting CS,H,K,P,TH BAG2X1-1 B.c_group BAG2X1-1 Soil USA, Massachusetts, Boston conflicting CS,H,K,P,TH AH1134 B.cereus BC006 (AH1134) Human, eye [pediatric endophthalmitis case] USA, Oklahoma clusterIV CS,H,K,P,TH,MLEE AFS083123 B.cereus AFS083123 Plant, core (2014) USA, North Carolina conflicting CS,H,K,P,TH AFS019518 B.thuringiensis AFS019518 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH YBT-1520#2 B.thuringiensis kurstaki YBT-1520 (YBT-1520#2) [two complete genomes sequenced for this strain with different MLST sequences; both genomes sequenced by State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, Hubei, China; sequences conflicting with isolate YBT-1520#1] conflicting CS,H,K,P,TH MOD1Bc221 B.mycoides MOD1 Bc221 Food, food product (2016) USA, Maryland clusterVI CS,H,K,P,TH AFS040610 B.toyonensis AFS040610 Soil (2014) USA, New York clusterV CS,H,K,P,TH #17 B.cereus #17 Animal, Mouse microbiota clusterIV CS,H,K,P,TH AFS028249 B.toyonensis AFS028249 Plant, Soybean core (2014) USA, Iowa clusterV CS,H,K,P,TH BAG2O-2 B.c_group BAG2O-2 Soil USA, Massachusetts, Boston clusterV CS,H,K,P,TH AFS072183 B.cereus AFS072183 Plant, Corn core (2014) USA, Illinois conflicting CS,H,K,P,TH AFS061931 B.wiedmannii AFS061931 Soil (2014) USA, New York clusterII CS,H,K,P,TH AFS065445 B.cereus AFS065445 Plant, Corn core (2014) USA, North Carolina conflicting CS,H,K,P,TH AFS002224 B.cereus AFS002224 Soil (2014) USA, Iowa clusterVI CS,H,K,P,TH BGSC4U1#1 B.thuringiensis kyushuensis BGSC4U1#1 (HD541, 74-F-6-18, DSM6079, T11a001) Animal, Insect, silkworm (Bombyx mori) (1979) [two complete genomes sequenced for this strain with different MLST sequences and origins; strain sequenced by State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, Hubei, China; sequences conflicting with isolate BGSC4U1#2] Japan clusterIV CS,H,K,P,TH AFS066671 B.thuringiensis AFS066671 Plant, Corn root (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS045425 B.toyonensis AFS045425 Plant, Soybean leaf (2014) USA, Missouri clusterV CS,H,K,P,TH BGSC4AA1 B.thuringiensis morrisoni BGSC4AA1 Soil (1987) [originally classified as B.thuringiensis tenebrionis; two complete genomes sequenced for this strain with identical MLST sequences] UK clusterIV CS,H,K,P,TH BGSC4BB1 B.thuringiensis sooncheon BGSC4BB1 South Korea conflicting CS,H,K,P,TH AFS075396 B.thuringiensis AFS075396 Plant, Soybean leaf (2014) USA, Minnesota clusterIV CS,H,K,P,TH AFS022362 B.cereus AFS022362 Soil (2014) USA, New York clusterVI CS,H,K,P,TH AFS023984 B.toyonensis AFS023984 Plant, Soybean root (2014) USA, Iowa clusterV CS,H,K,P,TH I32 B.cereus I32 Plant, Grass (2017) Israel, Ramat HaNadiv conflicting CS,H,K,P,TH AFS082639 B.thuringiensis AFS082639 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS000938 B.wiedmannii AFS000938 Plant, Corn core (2014) USA, Illinois clusterII CS,H,K,P,TH AFS000937 B.cereus AFS000937 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS054461 B.toyonensis AFS054461 Soil (2014) USA, Iowa clusterV CS,H,K,P,TH AFS000445 B.toyonensis AFS000445 Plant, Weed plant (2014) USA, Indiana clusterV CS,H,K,P,TH ATCC4342 B.cereus ATCC4342 (AH226, AH821) Dairy products, milk (1900) [sensitive to gamma phage infecting B.anthracis; two complete genomes sequenced for this strain with identical MLST sequences] USA clusterIII CS,H,K,P,TH,AFLP1,AFLP2,MLEE AFS090430 B.wiedmannii AFS090430 Plant, Corn grain bin dust (2013) USA, Iowa clusterII CS,H,K,P,TH AFS030602 B.toyonensis AFS030602 Plant, Tomato plant (2014) USA, North Carolina clusterV CS,H,K,P,TH AFS075487 B.thuringiensis AFS075487 Plant, Core Other Plant (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS086460 B.wiedmannii AFS086460 Soil (2014) USA, New York clusterII CS,H,K,P,TH AFS036350 B.thuringiensis AFS036350 Plant, Corn core (2014) USA, Illinois clusterIV CS,H,K,P,TH AFS032990 B.anthracis AFS032990 Plant, Corn core (2014) USA, Illinois clusterIII CS,H,K,P,TH BGSC4BR1 B.thuringiensis poloniensis BGSC4BR1 (Pbt23) Animal, Insect, Black Arches/Nun Moth (Lymantria monacha) larvae Denmark clusterIV CS,H,K,P,TH F4810/72 B.cereus F4810/72 (AH187, KBBI2, FHL4810, NCTC11143, DSM4312, SMR178) Human, vomit (1972) [emetic food poisoning outbreak; human vomiting; reference emetic toxin/cereulide producer] UK clusterIII CS,H,K,P,TH,AFLP2,AFLP3,MLEE AFS022681 B.cereus AFS022681 Plant, core (2014) USA, North Carolina clusterII CS,H,K,P,TH HD5 B.thuringiensis kenyae HD5 clusterIV CS,H,K,P,TH BGSC4AZ1 B.thuringiensis nigeriensis BGSC4AZ1 (82-8001, T08B001) (1984) Czechoslovakia clusterIV CS,H,K,P,TH BAG5X2-1 B.c_group BAG5X2-1 Soil USA, Massachusetts, Boston clusterII CS,H,K,P,TH AFS010831 B.cereus AFS010831 Soil (2014) USA, North Carolina clusterIV CS,H,K,P,TH ANSES89 B.anthracis ANSES89 clusterIII CS,H,K,P,TH AFS095604 B.pseudomycoides AFS095604 Plant, Soybean core (2014) USA, Iowa conflicting CS,H,K,P,TH AFS065668 B.pseudomycoides AFS065668 Soil (2014) USA, Iowa conflicting CS,H,K,P,TH AFS074370 B.cereus AFS074370 Plant, Soybean core (2014) USA, Iowa conflicting CS,H,K,P,TH VDM034 B.c_group VDM034 Soil Spain clusterVI CS,H,K,P,TH BGSC4BF1 B.thuringiensis londrina BGSC4BF1 Germany clusterIV CS,H,K,P,TH AFS050681 B.cereus AFS050681 Soil (2014) USA, Iowa clusterVI CS,H,K,P,TH AFS082261 B.cereus AFS082261 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS016365 B.cereus AFS016365 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS065951 B.toyonensis AFS065951 Plant, Corn core (2014) USA, Illinois clusterV CS,H,K,P,TH AFS065770 B.cereus AFS065770 Plant, Weed core (2014) USA, North Carolina clusterIV CS,H,K,P,TH 2000032892 B.anthracis 2000032892 clusterIII CS,H,K,P,TH MB.1 B.cereus MB.1 Food (2014) Germany, Munich clusterIII CS,H,K,P,TH C1L B.cereus C1L Soil or plant, rhizosphere (2003) Taiwan, Taroko National Park, Hualien conflicting CS,H,K,P,TH AFS036423 B.cereus AFS036423 Plant, Corn root (2014) USA, Iowa clusterVI CS,H,K,P,TH AFS005614 B.cereus AFS005614 Plant, Corn core (2014) USA, Illinois clusterII CS,H,K,P,TH AFS065753 B.thuringiensis AFS065753 Animal, earthworm (2013) USA, Minnesota clusterIV CS,H,K,P,TH AFS041586 B.thuringiensis AFS041586 Plant, Grass core (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS003288 B.pseudomycoides AFS003288 Plant, Corn leaf (2014) USA, Illinois clusterI CS,H,K,P,TH T63001 B.thuringiensis bolivia T63001 Bolivia conflicting CS,H,K,P,TH,AFLP3 RIVMBC938 B.cereus RIVMBC938 (KAL738) Food, lamb-s lettuce/Corn salad (2002) clusterII CS,H,K,P,TH,AFLP3 MOD1Bc83 B.cereus MOD1 Bc83 Food, Whole Black Pepper (2015) USA, Maryland clusterIV CS,H,K,P,TH AFS030663 B.cereus AFS030663 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH CZC5 B.anthracis CZC5 Animal, Hippopotamus tissues (2011) [from hippopotamuses that had died during an anthrax outbreak] Zambia clusterIII CS,H,K,P,TH 03BB108 B.cereus 03BB108 Other, dust in workspace associated with clinical case (isolate 03BR1283) (2003) [two complete genomes sequenced for this strain with identical MLST sequences] USA, Texas clusterIII CS,H,K,P,TH BGSC4C1 B.thuringiensis alesti BGSC4C1 (AH842, HD16, CCEB463) Animal, Insect, silkworm (Bombyx mori) (1987) [two complete genomes sequenced for this strain with identical MLST sequences] Czechoslovakia clusterIV CS,H,K,P,TH,AFLP2,MLEE Es2-45 B.toyonensis Es2-45 Soil (2012) China, Enshi clusterII CS,H,K,P,TH MOD1Bc187 B.cereus MOD1 Bc187 Human, Baby Wipes (2016) USA, Maryland clusterIII CS,H,K,P,TH FSLW8-0268 B.cereus FSL W8-0268 Other, Evaporator (last effect) - Liquid (WIP) (2012) USA, New York clusterIV CS,H,K,P,TH BGSC4AS1 B.thuringiensis oswaldocruzi BGSC4AS1 (T38001, LFB855) Food, black pepper powder Brazil clusterIII CS,H,K,P,TH,AFLP3 AFS099306 B.cereus AFS099306 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH MOD1Bc67 B.cereus MOD1 Bc67 Other, Powdered Infant Formula (2015) USA, Maryland clusterIII CS,H,K,P,TH MOD1Bc138 B.cereus MOD1 Bc138 Food, Dietary Supplements (2015) USA, Maryland clusterIII CS,H,K,P,TH AFS078322 B.wiedmannii AFS078322 Soil (2014) USA, New York clusterII CS,H,K,P,TH VD214 B.c_group VD214 Other, Water UK, Scotland clusterV CS,H,K,P,TH 16-00221 B.cereus 16-00221 clusterIII CS,H,K,P,TH NMSW16 B.wiedmannii NMSW16 Soil (2005) China, Tibet, Nyingchi clusterII CS,H,K,P,TH AFS021349 B.toyonensis AFS021349 Plant, Corn core (2013) USA, Illinois clusterV CS,H,K,P,TH AFS052650 B.toyonensis AFS052650 Animal, Insect, Japanese beetle (2013) USA, Illinois clusterV CS,H,K,P,TH AFS052302 B.wiedmannii AFS052302 Plant, Soybean core (2014) USA, Iowa clusterII CS,H,K,P,TH PR09-1 B.anthracis PR09-1 USA clusterIII CS,H,K,P,TH AFS017068 B.cereus AFS017068 Plant, Corn core (2014) USA, North Carolina conflicting CS,H,K,P,TH AFS084355 B.cereus AFS084355 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS031495 B.toyonensis AFS031495 Plant, Soybean leaf (2014) USA, Minnesota clusterV CS,H,K,P,TH MOD1Bc149 B.cereus MOD1 Bc149 Food, Hybrid Tilapia (2006) USA, Maryland clusterIV CS,H,K,P,TH GTC2926 B.cereus GTC2926 clusterVI CS,H,K,P,TH VD078 B.c_group VD078 Soil Greenland clusterVI CS,H,K,P,TH AFS056613 B.cereus AFS056613 Soil (2014) USA, New York clusterVI CS,H,K,P,TH AFS089449 B.toyonensis AFS089449 Plant, Soybean leaf (2014) USA, Minnesota clusterV CS,H,K,P,TH AFS048113 B.anthracis AFS048113 Plant, Weed core (2014) USA, North Carolina clusterIII CS,H,K,P,TH BGSC6E1 B.cereus BGSC6E1 (AH263, GP7) [produces chitinase] clusterIII CS,H,K,P,TH 6/27/S B.cereus 6/27/S Human, faeces/stools [human diarrhea] clusterIV CS,H,K,P,TH AFS018713 B.wiedmannii AFS018713 Plant, Corn (2014) USA, Iowa clusterII CS,H,K,P,TH F528/94 B.cereus F528/94 Food, Chinese restaurant beef and chow mein and rice (1994) [diarrheal food poisoning outbreak] UK clusterII CS,H,K,P,TH,AFLP3 HD1#2 B.thuringiensis kurstaki HD1 (HD1#2) Animal, Insect, Pink Bollworm (Pectinophora gossypiella) (1970) [strain sequenced by State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, Hubei, China; MLST data conflicting with isolates BGSC4D1, ATCC33679, HD1#1, and HD1#3; three complete genomes sequenced for this strain: identical MLST sequences between isolates HD1#1 and HD1#3 and different sequences in isolate HD1#2] USA clusterIV CS,H,K,P,TH AFS014747 B.wiedmannii AFS014747 Plant, Corn core (2014) USA, Illinois clusterII CS,H,K,P,TH BGSC4Q1 B.thuringiensis israelensis BGSC4Q1 (HD567, ONR60A) Animal, Insect, Culicidae (Mosquitoes) larvae (1977) [two complete genomes sequenced for this strain with identical MLST sequences] Israel clusterIV CS,H,K,P,TH MOD1Bc228 B.mycoides MOD1 Bc228 Food, food product (2016) USA, Maryland clusterVI CS,H,K,P,TH AFS002659 B.wiedmannii AFS002659 Soil (2014) USA, New York clusterII CS,H,K,P,TH GOE10 B.weihenstephanensis GOE10 Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014) Germany, Goettingen clusterVI CS,H,K,P,TH F3162/04 B.cereus F3162/04 Human, faeces/stools (2004) [clinical isolate] clusterIII CS,H,K,P,TH 16-00188 B.cereus 16-00188 conflicting CS,H,K,P,TH SN4-1 B.pacificus SN4-1 Animal, Insect, European Corn Borer (Ostrinia nubilalis) (2018) Vietnam clusterIII CS,H,K,P,TH AFS096226 B.cereus AFS096226 Plant, Soybean leaf (2013) USA, Minnesota clusterIV CS,H,K,P,TH B4081 B.cereus B4081 Food (2013) Netherlands clusterIV CS,H,K,P,TH HuA2-9 B.c_group HuA2-9 Soil Belgium clusterVI CS,H,K,P,TH AFS056399 B.cereus AFS056399 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH T414 B.thuringiensis T414 Soil (2005) India, Tamil Nadu conflicting CS,H,K,P,TH AFS068806 B.cereus AFS068806 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH DE0177 B.thuringiensis DE0177 clusterIV CS,H,K,P,TH AFS049141 B.cereus AFS049141 Soil (2014) USA, New York clusterIV CS,H,K,P,TH AFS023732 B.wiedmannii AFS023732 Soil (2014) USA, Iowa clusterII CS,H,K,P,TH SJ-S23 B.cereus SJ-S23 Human USA, Tennessee, Memphis clusterIV CS,H,K,P,TH AFS080164 B.cereus AFS080164 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS070891 B.cereus AFS070891 Plant, Corn (2014) USA, Iowa clusterIV CS,H,K,P,TH MC28 B.thuringiensis MC28 Soil, virgin forest soil China, Mu Chuan virgin forest, Sichuan Province clusterV CS,H,K,P,TH BGSC4AH1 B.thuringiensis konkukian BGSC4AH1 (HL47, T34001) (1994) South Korea clusterIII CS,H,K,P,TH,AFLP3 IMSNU11043 B.thuringiensis IMSNU11043 clusterIV K AFS087654 B.cereus AFS087654 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH 2000032951 B.anthracis 2000032951 Human (1958) clusterIII CS,H,K,P,TH AFS097856 B.thuringiensis AFS097856 Plant, Soybean leaf (2014) USA, Minnesota clusterIV CS,H,K,P,TH AFS054343 B.thuringiensis AFS054343 Plant, Corn root (2014) USA, Illinois clusterIV CS,H,K,P,TH I109 B.cereus I109 Plant, Grass (2017) Israel, Ramat HaNadiv clusterIV CS,H,K,P,TH FSLH8-0492 B.weihenstephanensis FSL H8-0492 Dairy products, raw milk (2006) USA clusterVI CS,H,K,P,TH PCr B.anthracis PCr Other, bone powder (1978) [imported bone powder from Thailand, which was fed to cattle diagnosed with anthrax in Shizuoka Prefecture, Japan; penicillin-resistant] clusterIII CS,H,K,P,TH BFV B.anthracis BFV (BA0052) [pXO1+/pXO2+] clusterIII CS,H,K,P,TH B4088 B.cereus B4088 Food (2013) Netherlands clusterII CS,H,K,P,TH AFS061806 B.cereus AFS061806 Plant, Corn root (2014) USA, Iowa clusterVI CS,H,K,P,TH Florida B.anthracis Ames Florida (A2012) Human [from bioterror mailing attacks in 2001; pXO1+/pXO2+] USA, Florida clusterIII CS,H,K,P,TH Q1 B.cereus Q1 Other, deep-subsurface oil reservoir China (Northeastern), Daqing oil field clusterIII CS,H,K,P,TH IP5832 B.cereus IP5832 Other, commercial probiotic clusterV CS,H,K,P,TH AFS057784 B.thuringiensis AFS057784 Plant, Corn core (2014) USA, Illinois clusterIV CS,H,K,P,TH AFS009162 B.cereus AFS009162 Soil (2014) USA, New York clusterVI CS,H,K,P,TH GOE7#1 B.thuringiensis GOE7#1 Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014) Germany, Goettingen clusterV CS,H,K,P,TH AFS081053 B.toyonensis AFS081053 Plant, Corn core (2014) USA, Illinois clusterV CS,H,K,P,TH AFS006065 B.cereus AFS006065 Soil (2014) USA, New York clusterIV CS,H,K,P,TH 2000031023 B.anthracis 2000031023 Animal, cattle (1957) clusterIII CS,H,K,P,TH AFS093397 B.cereus AFS093397 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS049152 B.thuringiensis AFS049152 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH MB.22 B.cereus MB.22 Food (2014) Germany, Munich clusterIII CS,H,K,P,TH AFS080080 B.wiedmannii AFS080080 Plant, Corn core (2014) USA, Illinois clusterII CS,H,K,P,TH AFS021634 B.thuringiensis AFS021634 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH ANSES32 B.anthracis ANSES32 clusterIII CS,H,K,P,TH A22 B.cereus A22 Plant, coffee root (2018) Vietnam conflicting CS,H,K,P,TH BGSC4Z1 B.thuringiensis ostriniae HD501 (BGSC4Z1, AH449) (1975) China clusterIV CS,H,K,P,TH AFS062641 B.cereus AFS062641 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH A1055 B.anthracis A1055 (2000031021, GroupC) [belongs to the divergent C branch; pXO1-/pXO2+] USA, Louisiana clusterIII CS,H,K,P,TH IMSNU12087 B.thuringiensis IMSNU12087 (KCTC1108) Philippines clusterIV K AFS029987 B.anthracis AFS029987 Plant, tree leaf (2014) USA, North Carolina clusterIII CS,H,K,P,TH AFS039283 B.cereus AFS039283 Soil (2014) USA, New York clusterVI CS,H,K,P,TH AFS029513 B.cereus AFS029513 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH IMSNU10051 B.thuringiensis IMSNU10051 Animal, diseased insect larvae clusterIV K AFS064159 B.wiedmannii AFS064159 Plant, Weed leaf (2014) USA, Ohio clusterII CS,H,K,P,TH AFS008436 B.cereus AFS008436 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH F B.cereus F Soil, ancient permafrost aged nearly 3 million years Russia, Yakutia clusterIII CS,H,K,P,TH AFS096642 B.cereus AFS096642 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS043413 B.cereus AFS043413 Soil (2014) USA, New York clusterIV CS,H,K,P,TH AFS028618 B.toyonensis AFS028618 Plant, Corn leaf (2014) USA, Illinois clusterV CS,H,K,P,TH DE0030 B.thuringiensis israelensis DE0030 clusterIV CS,H,K,P,TH CMCCP0021 B.cereus CMCC P0021 Soil (1979) China clusterIV CS,H,K,P,TH AFS093334 B.thuringiensis AFS093334 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH MOD1Bc90 B.cereus MOD1 Bc90 Food, Whole Black Pepper (2015) USA, Maryland clusterIII CS,H,K,P,TH AFS072084 B.anthracis AFS072084 Plant, Corn (2014) USA, North Carolina clusterIII CS,H,K,P,TH AFS096978 B.thuringiensis AFS096978 Plant, Corn core (2014) USA, Illinois clusterIV CS,H,K,P,TH AFS091954 B.cereus AFS091954 Soil (2014) USA, New York clusterVI CS,H,K,P,TH AFS032951 B.toyonensis AFS032951 Soil (2014) USA, Iowa clusterV CS,H,K,P,TH DE0472 B.thuringiensis DE0472 conflicting CS,H,K,P,TH AFS027958 B.toyonensis AFS027958 Plant, Grass core (2014) USA, Iowa clusterV CS,H,K,P,TH AFS040883 B.pseudomycoides AFS040883 Soil (2014) USA, North Carolina clusterI CS,H,K,P,TH FORC021 B.cereus FORC021 Other, Knife South Korea, Ulsan clusterIV CS,H,K,P,TH Bt407 B.thuringiensis 407 (Bt407, AH1031) [Pasteur Institute; well studied isolate that has been cured of the plasmid that encodes the insecticidal crystal toxin; three complete genomes sequenced for this strain with identical MLST sequences] France, Paris clusterIV CS,H,K,P,TH,MLEE DE0288 B.cereus DE0288 clusterIV CS,H,K,P,TH AFS071406 B.cereus AFS071406 Soil (2014) USA, New York clusterVI CS,H,K,P,TH AFS055677 B.cereus AFS055677 Soil (2014) USA, Iowa clusterVI CS,H,K,P,TH AFS022493 B.pseudomycoides AFS022493 Soil (2014) USA, Iowa clusterI CS,H,K,P,TH MOD1Bc107 B.cereus MOD1 Bc107 Other, Oxytetracycline Medicated Fish Feed (2006) USA, Maryland clusterIII CS,H,K,P,TH FSLH8-0482 B.cereus FSL H8-0482 Soil (2006) [soil in areas adjacent to barns] USA, New York clusterV CS,H,K,P,TH DE0103 B.paramycoides DE0103 clusterVI CS,H,K,P,TH AFS056009 B.thuringiensis AFS056009 (2014) USA, Iowa conflicting CS,H,K,P,TH AFS022238 B.cereus AFS022238 Food, Mushroom (2013) USA, Iowa clusterVI CS,H,K,P,TH KCTC1012 B.c_group KCTC1012 (ATCC11778) [B.cereus or B.mycoides; data from Ko et al. 2004, Infect. Immunity 72, 5253-5261; sequences conflicting with isolate ATCC11778] clusterIV K,P 2002013094 B.anthracis 2002013094 Soil (1956) [pXO1+/pXO2+; two complete genomes sequenced for this strain with identical MLST sequences] USA clusterIII CS,H,K,P,TH MOD1Bc64 B.cereus MOD1 Bc64 Human, Baby Wipes (2016) USA, Maryland clusterIII CS,H,K,P,TH AFS007693 B.cereus AFS007693 Soil (2013) USA, North Carolina clusterIV CS,H,K,P,TH AFS013932 B.toyonensis AFS013932 Soil (2014) USA, New York clusterV CS,H,K,P,TH AFS017211 B.cereus AFS017211 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS097474 B.cereus AFS097474 Plant, Weed leaf (2014) USA, Indiana clusterIV CS,H,K,P,TH AFS047230 B.toyonensis AFS047230 Plant, Soybean core (2014) USA, Iowa clusterV CS,H,K,P,TH 2000032819 B.anthracis 2000032819 clusterIII CS,H,K,P,TH AFS048805 B.pseudomycoides AFS048805 Plant, Corn core (2014) USA, Illinois clusterI CS,H,K,P,TH BAG1X1-1 B.c_group BAG1X1-1 Soil USA, Massachusetts, Boston conflicting CS,H,K,P,TH AFS027027 B.toyonensis AFS027027 Plant, Corn root (2014) USA, Iowa clusterV CS,H,K,P,TH AFS031651 B.thuringiensis AFS031651 Animal, Insect, beetle (2013) USA, North Carolina clusterIV CS,H,K,P,TH AFS040286 B.thuringiensis AFS040286 Plant, Corn seed (2014) USA, Iowa clusterIV CS,H,K,P,TH RIT375 B.anthracis RIT375 Plant, Insulin plant/Spiral flag (Costus igneus) Internal Stem Tissue (2015) Puerto Rico clusterIII CS,H,K,P,TH AFS052778 B.thuringiensis AFS052778 Soil (2014) USA, North Carolina clusterIV CS,H,K,P,TH MOD1Bc215 B.cereus MOD1 Bc215 Human, Baby Wipes (2016) USA, Maryland clusterIII CS,H,K,P,TH YBT-1518 B.thuringiensis YBT-1518 Soil [high toxicity to nematode] China, Jianghan Plain, Hubei clusterIV CS,H,K,P,TH BcFL2013 B.cereus BcFL2013 clusterIII CS,H,K,P,TH AFS042904 B.cereus AFS042904 Plant, Wheat plant (2014) USA, North Carolina clusterII CS,H,K,P,TH AFS032444 B.cereus AFS032444 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS008176 B.wiedmannii AFS008176 Plant, Corn root (2013) USA, Minnesota clusterII CS,H,K,P,TH LM1212-W3 B.tropicus LM1212-W3 Animal, Insect, beetle (Oryctes gigas) (2013) France, Paris clusterIII CS,H,K,P,TH K4516 B.anthracis BA1015 (A0376, K4516) Animal, cattle (Bovine) (1939) [pXO1+/pXO2+] USA, Maryland clusterIII CS,H,K,P,TH,AFLP2 AFS067879 B.toyonensis AFS067879 Plant, Soybean leaf (2014) USA, Minnesota clusterV CS,H,K,P,TH SJ-S25 B.cereus SJ-S25 Human USA, Tennessee, Memphis clusterIII CS,H,K,P,TH AFS027178 B.thuringiensis AFS027178 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS050757 B.wiedmannii AFS050757 Plant, Soybean root (2014) USA, Iowa clusterII CS,H,K,P,TH AFS081512 B.cereus AFS081512 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS086269 B.toyonensis AFS086269 Plant, Corn core (2014) USA, Illinois clusterV CS,H,K,P,TH MOD1Bc188 B.cereus MOD1 Bc188 Human, Baby Wipes (2016) USA, Maryland clusterIII CS,H,K,P,TH AFS077577 B.pseudomycoides AFS077577 Soil (2014) USA, New York conflicting CS,H,K,P,TH K3 B.anthracis K3 Human [pXO1+/pXO2+] South Africa clusterIII CS,H,K,P,TH AFS000087 B.toyonensis AFS000087 Soil (2013) USA, North Carolina clusterV CS,H,K,P,TH AFS085829 B.thuringiensis AFS085829 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS036771 B.wiedmannii AFS036771 Plant, Soybean leaf (2014) USA, Minnesota clusterII CS,H,K,P,TH AFS060522 B.toyonensis AFS060522 Plant, Corn core (2014) USA, Illinois clusterV CS,H,K,P,TH AFS039926 B.cereus AFS039926 Soil (2014) USA, New York clusterVI CS,H,K,P,TH NA205-3 B.thuringiensis tolworthi NA205-3 Other, dust from maize silo Spain clusterIV CS,H,K,P,TH SJ-S3 B.cereus SJ-S3 Human USA, Tennessee, Memphis conflicting CS,H,K,P,TH AH1272 B.cereus AH1272 Human, amniotic fluid; Reykjavik University Hospital (1999) [from the same hospital as isolates AH1270, AH1271, and AH1273] Iceland, Reykjavik clusterVI CS,H,K,P,TH AFS038688 B.cereus AFS038688 Plant, Corn core (2014) USA, North Carolina conflicting CS,H,K,P,TH AFS074602 B.toyonensis AFS074602 Plant, Soybean leaf (2014) USA, Iowa clusterV CS,H,K,P,TH QZL38 B.thuringiensis QZL38 Soil (2018) China, Liaoning Province clusterIV CS,H,K,P,TH BA04 B.thuringiensis BA04 Soil (2013) India, Assam conflicting CS,H,K,P,TH MOD1Bc225 B.cereus MOD1 Bc225 Human, faeces/stools (2016) USA, Maryland clusterIII CS,H,K,P,TH T07005 B.thuringiensis aizawai T07005 clusterIV CS,H,K,P,TH JCM15801 B.gaemokensis type strain JCM15801 (MCCC1A00707, BL3-6, KCTC13318) [Yellow Sea tidal flat sediment (2011) [two complete genomes sequenced for this strain with different MLST sequences and origins; strain sequenced by The Third Institute of Oceanography, State of Oceanic Administration (SOA), Xiamen, Fujian, China; sequences conflicting with isolate KCTC 13318]] clusterI CS,H,K,P,TH BAG6X1-2 B.c_group BAG6X1-2 Soil USA, Massachusetts, Boston clusterVI CS,H,K,P,TH AFS053336 B.cereus AFS053336 Plant, Weed core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS015120 B.cereus AFS015120 Plant, Corn core (2014) USA, Illinois conflicting CS,H,K,P,TH SJ-S1 B.cereus SJ-S1 clusterIV CS,H,K,P,TH AFS004741 B.pseudomycoides AFS004741 Soil (2014) USA, Iowa conflicting CS,H,K,P,TH HYU01 B.anthracis HYU01 Soil (2009) [pXO1+/pXO2+] South Korea, Changnyeong clusterIII CS,H,K,P,TH AFS099561 B.toyonensis AFS099561 Plant, Soybean leaf (2014) USA, Minnesota clusterV CS,H,K,P,TH AFS086766 B.cereus AFS086766 (2014) USA, North Carolina clusterII CS,H,K,P,TH BC04#1 B.cereus BC04 (BC04#1) Human, faeces/stools (2012) India clusterIV CS,H,K,P,TH HD521 B.thuringiensis indiana or dakota HD521 (BGSC4S2, AH456) Soil, soybean field USA, Indiana clusterIV CS,H,K,P,TH,AFLP2 ANSES122 B.anthracis ANSES122 clusterIII CS,H,K,P,TH AmesAnc B.anthracis Ames Ancestor (A0581, A2084) Animal, cattle (Cow) (1981) [this strain is the progenitor of all the Ames strains used as research tools in laboratories around the world; pXO1+/pXO2+] USA, Texas, Sarita clusterIII CS,H,K,P,TH AFS063010 B.wiedmannii AFS063010 (2014) USA, North Carolina clusterII CS,H,K,P,TH SB13 B.mycoides SB13 Soil (2016) Netherlands clusterVI CS,H,K,P,TH AFS067634 B.thuringiensis AFS067634 Plant, Corn root (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS045572 B.thuringiensis AFS045572 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH Ba-7673/89-Geo B.anthracis Ba-7673/89-Geo Soil (1989) Georgia clusterIII CS,H,K,P,TH AFS094920 B.wiedmannii AFS094920 (2014) USA, Iowa clusterII CS,H,K,P,TH AFS066710 B.thuringiensis AFS066710 Plant, Corn root (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS086995 B.toyonensis AFS086995 Plant, Soybean leaf (2014) USA, Minnesota clusterV CS,H,K,P,TH AFS041581 B.cereus AFS041581 Plant, Soybean root (2014) USA, Missouri clusterIV CS,H,K,P,TH Rock1-15 B.cereus Rock1-15 Soil USA, Maryland, Rockville clusterIV CS,H,K,P,TH BMB3201 B.thuringiensis BMB3201 Soil (2015) China, Hubei Province clusterIV CS,H,K,P,TH 9080-G B.anthracis 9080-G Soil (1998) [pXO1+/pXO2+] Georgia, Gardabani clusterIII CS,H,K,P,TH AFS002508 B.wiedmannii AFS002508 Plant, Soybean core (2014) USA, Iowa clusterII CS,H,K,P,TH AFS036089 B.toyonensis AFS036089 Plant, Soybean root (2014) USA, Missouri clusterV CS,H,K,P,TH ANSES118 B.anthracis ANSES118 clusterIII CS,H,K,P,TH AFS028514 B.cereus AFS028514 Plant, Corn core (2014) USA, Illinois clusterIV CS,H,K,P,TH AFS046388 B.cereus AFS046388 Plant, Soybean core (2014) USA, Iowa conflicting CS,H,K,P,TH AFS016912 B.cereus AFS016912 Plant, core (2014) USA, North Carolina conflicting CS,H,K,P,TH LM1212 B.thuringiensis LM1212 Animal, Insect, beetle (Oryctes gigas) cadaver [differentiates into crystal producers or spore formers during the stationary phase; two complete genomes sequenced for this strain with identical MLST sequences] Madagascar clusterIII CS,H,K,P,TH I153 B.cereus I153 Plant, Grass (2017) Israel, Karie Deshe clusterIV CS,H,K,P,TH AFS006079 B.toyonensis AFS006079 Plant, Soybean root (2014) USA, Minnesota clusterV CS,H,K,P,TH TIAC219 B.c_group TIAC219 Food clusterIV CS,H,K,P,TH Vollum B.anthracis Vollum [this strain is used in research studies and is found in the UK, Spain, and Zimbabwe; pXO1+/pXO2+; two complete genomes sequenced for this strain with identical MLST sequences] clusterIII CS,H,K,P,TH,AFLP1 BGSC4CF1 B.thuringiensis jegathesan BGSC4CF1 Malaysia clusterIV CS,H,K,P,TH AFS030742 B.cereus AFS030742 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH BGSC4I4 B.thuringiensis entomocidus/subtoxicus BGSC4I4 (HD9) Animal, Insect, stored nut moth (Paralipsa gularis) (1958) [two complete genomes sequenced for this strain with identical MLST sequences] Canada clusterIV CS,H,K,P,TH AFS009778 B.cereus AFS009778 Soil (2013) USA, North Carolina clusterIV CS,H,K,P,TH LP2YM B.thuringiensis LP 2 YM USA, Yosemite National Park, California clusterII CS,H,K,P,TH E33L B.cereus E33L (Zebra Killer) Animal, Carcass of dead zebra (1996) [two complete genomes sequenced for this strain with identical MLST sequences] Namibia, Etosha National Park clusterIII CS,H,K,P,TH FSLM7-0938 B.wiedmannii FSL M7-0938 Dairy products, raw milk (2011) USA, New York clusterII CS,H,K,P,TH F2404B/79 B.cereus F2404B/79 (1979) [diarrheal food poisoning outbreak] clusterII CS,H,K,P,TH,AFLP3 HN001 B.cereus HN001 Human, vomit of food poisoning patient (2000) China clusterIV CS,H,K,P,TH DE0086 B.paranthracis DE0086 clusterIII CS,H,K,P,TH NVH0674/98 B.cereus NVH0674-98 (NVH0674/98) Food, Scrambled eggs or mashed swede (1998) [diarrheal food poisoning outbreak] Norway clusterII CS,H,K,P,TH,AFLP3 KPR-7A B.cereus KPR-7A clusterII CS,H,K,P,TH FN31 B.thuringiensis FN31 Other, Sediments (2002) Pacific Ocean clusterIV CS,H,K,P,TH AFS041274 B.toyonensis AFS041274 Plant, Soybean leaf (2014) USA, Iowa clusterV CS,H,K,P,TH AFS020608 B.thuringiensis AFS020608 Plant, Corn root (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS001542 B.cereus AFS001542 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH DAR81934#1 B.thuringiensis DAR81934 (DAR81934#1) [exhibits molluscicidal activity toward the pest snail Cernuella virgata; two complete genomes sequenced for this strain with different MLST sequences; strain sequenced by School of Agricultural and Wine Sciences, Charles Sturt University, Wagga Wagga, New South Wales, Australia; sequences conflicting with isolate DAR81934#2] Australia, Port Campbell National Park clusterIV CS,H,K,P,TH TYU4 B.toyonensis TYU4 Plant, Japanese yew (Taxus cuspidata) (2015) South Korea conflicting CS,H,K,P,TH AFS057764 B.anthracis AFS057764 Plant, core (2014) USA, North Carolina clusterIII CS,H,K,P,TH HZBCE-01 B.cereus HZBCE-01 Human, stomach (2015) China, Hangzhou clusterIII CS,H,K,P,TH Rock3-44 B.cereus Rock3-44 Soil USA, Maryland, Rockville conflicting CS,H,K,P,TH AFS030140 B.cereus AFS030140 Plant, Weed plant (2014) USA, Indiana conflicting CS,H,K,P,TH AFS033597 B.thuringiensis AFS033597 Soil (2014) USA, North Carolina clusterIV CS,H,K,P,TH DE0606 B.thuringiensis DE0606 clusterIV CS,H,K,P,TH DE0018 B.nitratireducens DE0018 clusterVI CS,H,K,P,TH Btm27 B.thuringiensis mexicanensis 27 (BGSC4AC2, Btm27) Animal, Insect, Citrus mealybug (Planococcus citri) (2010) Egypt conflicting CS,H,K,P,TH AFS098856 B.pseudomycoides AFS098856 Soil (2014) USA, New York clusterI CS,H,K,P,TH EC18 B.mycoides EC18 Soil (2016) Netherlands clusterVI CS,H,K,P,TH BAG4X12-1 B.c_group BAG4X12-1 Soil USA, Massachusetts, Boston conflicting CS,H,K,P,TH AFS070094 B.toyonensis AFS070094 Plant, Soybean leaf (2014) USA, Minnesota clusterV CS,H,K,P,TH MOD1Bc179 B.cereus MOD1 Bc179 Human, Baby Wipes (2016) USA, Maryland clusterIII CS,H,K,P,TH INRAA3 B.cereus INRA A3 Food, starch (1998) (1998) France, Normandie clusterIV CS,H,K,P,TH,AFLP3 AFS017032 B.cereus AFS017032 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS080374 B.pseudomycoides AFS080374 Plant, Corn core (2014) USA, Illinois conflicting CS,H,K,P,TH MOD1Bc199 B.cereus MOD1 Bc199 Human, Baby Wipes (2016) USA, Maryland clusterIII CS,H,K,P,TH B4155 B.cereus B4155 Food (2013) Netherlands clusterIV CS,H,K,P,TH HBL-AI B.cereus HBL-AI Other, bacteria air in Laboratory (2016) China, Baoding clusterIV CS,H,K,P,TH AFS061268 B.toyonensis AFS061268 Plant, Soybean leaf (2014) USA, Minnesota clusterV CS,H,K,P,TH AFS067067 B.toyonensis AFS067067 Plant, Corn (2014) USA, Iowa clusterV CS,H,K,P,TH MYb220 B.cereus MYb220 Soil, compost Germany, Roxel clusterIII CS,H,K,P,TH T0131 B.thuringiensis T0131 Soil (2015) Brazil, Tocantins State clusterIV CS,H,K,P,TH AFS075467 B.cereus AFS075467 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH Tangail-1 B.anthracis Tangail-1 Soil (2012) Bangladesh, Tangail clusterIII CS,H,K,P,TH VD136 B.c_group VD136 Soil UK, Scotland conflicting CS,H,K,P,TH AFS093833 B.cereus AFS093833 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH KCTC1034 B.thuringiensis IMSNU12086 (KCTC1034, ATCC10792, KCTC3452) Animal, Insect, Mediterranean flour moth/mill moth (Ephestia kuhniella/Anagasta kuehniella) [data from Ko et al. 2004, Infect. Immunity 72, 5253-5261 and Kim et al. 2005, Yale J. Biol. Med. 78, 1-14; sequences conflicting with isolates ATCC10792#1, ATCC10792#2, and ATCC10792#3] clusterIV K,P HuA3-9 B.c_group HuA3-9 Soil Belgium clusterVI CS,H,K,P,TH AFS049391 B.toyonensis AFS049391 Plant, Corn core (2014) USA, Illinois clusterV CS,H,K,P,TH AFS017221 B.toyonensis AFS017221 Plant, Soybean core (2014) USA, Iowa clusterV CS,H,K,P,TH AFS084075 B.cereus AFS084075 Plant, Corn root (2014) USA, Iowa clusterIV CS,H,K,P,TH MOD1Bc224 B.cereus MOD1 Bc224 Food, food product (2016) USA, Maryland clusterIII CS,H,K,P,TH AFS098702 B.toyonensis AFS098702 Plant, Soybean root (2013) USA, Minnesota clusterV CS,H,K,P,TH GJ-2 B.anthracis GJ-2 Animal, cattle (Cow) Korea clusterIII K BM-BT15426 B.thuringiensis BM-BT15426 (2015) China, Guangzhou clusterIII CS,H,K,P,TH AFS053130 B.cereus AFS053130 Soil (2014) USA, Iowa clusterVI CS,H,K,P,TH AFS072284 B.wiedmannii AFS072284 Plant, Soybean leaf (2014) USA, Illinois clusterII CS,H,K,P,TH FSLJ3-0123 B.cereus FSL J3-0123 Dairy products, pasteurized milk (2012) USA clusterVI CS,H,K,P,TH AM65-52 B.thuringiensis israelensis AM65-52 (2014) France clusterIV CS,H,K,P,TH C3-5-12 B.cereus C3-5-12 Animal, camel faeces/stools (2015) United Arab Emirates clusterIII CS,H,K,P,TH AFS053406 B.cereus AFS053406 Plant, Corn plant (2014) USA, North Carolina clusterIV CS,H,K,P,TH MGYG-HGUT-02288 B.cereus MGYG-HGUT-02288 conflicting CS,H,K,P,TH STI1 B.anthracis STI1 Other, laboratory strain (1970) [vaccine strain; pXO1+/pXO2-] Russia, Saratov clusterIII CS,H,K,P,TH AH820 B.c_group AH820 Human, periodontitis (1995) Norway, Akershus clusterIII CS,H,K,P,TH,MLEE AFS080834 B.pseudomycoides AFS080834 Plant, Weed leaf (2014) USA, Ohio conflicting CS,H,K,P,TH MOD1Bc63 B.cereus MOD1 Bc63 Human, Baby Wipes (2016) USA, Maryland clusterIII CS,H,K,P,TH Sen2Col2 B.anthracis Sen2Col2 Senegal clusterIII CS,H,K,P,TH AFS026518 B.wiedmannii AFS026518 Plant, soybean seed (2014) USA, Iowa clusterII CS,H,K,P,TH GOE13 B.weihenstephanensis GOE13 Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014) Germany, Goettingen clusterVI CS,H,K,P,TH AFS002757 B.cereus AFS002757 Soil (2014) USA, New York clusterVI CS,H,K,P,TH UBA3967 B.thuringiensis UBA3967 clusterIV CS,H,K,P,TH MOD1Bc230 B.cereus MOD1 Bc230 Food, food product (2016) USA, Maryland conflicting CS,H,K,P,TH CH25 B.cytotoxicus CH 25 Food, Mashed potatoes (2014) Switzerland clusterVII CS,H,K,P,TH Gmb1 B.anthracis Gmb1 Gambia clusterIII CS,H,K,P,TH AFS068876 B.cereus AFS068876 Plant, Corn root (2014) USA, Iowa clusterIV CS,H,K,P,TH MOD1Bc50 B.cereus MOD1 Bc50 Food, Whole Black Pepper (2015) USA, Maryland clusterIII CS,H,K,P,TH 2000031006 B.anthracis 2000031006 (1956) USA, New Mexico clusterIII CS,H,K,P,TH MOD1Bc136 B.cereus MOD1 Bc136 Food, Dietary Supplements (2015) USA, Maryland clusterIII CS,H,K,P,TH AFS023720 B.cereus AFS023720 Soil (2013) USA, North Carolina clusterIV CS,H,K,P,TH CER057 B.weihenstephanensis CER057 Food, parsley [emetic toxin/cereulide producer toxin/cereulide producer] Belgium clusterVI CS,H,K,P,TH AFS048756 B.cereus AFS048756 Plant, Soybean core (2014) USA, Iowa conflicting CS,H,K,P,TH AFS018331 B.thuringiensis AFS018331 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS034785 B.cereus AFS034785 Plant, core (2014) USA, North Carolina clusterVI CS,H,K,P,TH AFS008413 B.cereus AFS008413 Soil (2014) USA, New York clusterIV CS,H,K,P,TH AFS052794 B.thuringiensis AFS052794 Plant, Soybean leaf (2014) USA, Minnesota clusterIV CS,H,K,P,TH AFS020011 B.toyonensis AFS020011 Plant, Grass core (2014) USA, Iowa clusterV CS,H,K,P,TH AFS093408 B.pseudomycoides AFS093408 Plant, leaf (2014) USA, Indiana conflicting CS,H,K,P,TH AFS002053 B.toyonensis AFS002053 Plant, Corn (2014) USA, Minnesota clusterV CS,H,K,P,TH 2000031038 B.anthracis 2000031038 (1957) clusterIII CS,H,K,P,TH MOD1Bc81 B.cereus MOD1 Bc81 Food, Whole Black Pepper (2015) USA, Maryland clusterIII CS,H,K,P,TH MOD1Bc193 B.cereus MOD1 Bc193 Human, Baby Wipes (2016) USA, Maryland clusterIII CS,H,K,P,TH AFS070359 B.thuringiensis AFS070359 Plant, Corn core (2014) USA, Illinois clusterIV CS,H,K,P,TH FSLR5-860 B.weihenstephanensis FSL R5-860 Dairy products, pasteurized milk (2006) USA conflicting CS,H,K,P,TH FSLR5-0708 B.mycoides FSL R5-0708 Dairy products, pasteurized milk (2006) USA clusterVI CS,H,K,P,TH BGSC4BG1 B.thuringiensis roskildiensis BGSC4BG1 (T45001, DMU38) Plant, leaves of ivy Denmark conflicting CS,H,K,P,TH,AFLP3 AFS039774 B.thuringiensis AFS039774 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH DE0363 B.nitratireducens DE0363 clusterVI CS,H,K,P,TH AFS010695 B.cereus AFS010695 Soil (2014) USA, North Carolina conflicting CS,H,K,P,TH Hu4-2 B.thuringiensis aizawai Hu4-2 Other, dust sample from maize grain silo Spain clusterIV CS,H,K,P,TH AFS099737 B.cereus AFS099737 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH FSLP2-0558 B.wiedmannii FSL P2-0558 Dairy food in process (2009) USA, New York clusterII CS,H,K,P,TH AFS089785 B.cereus AFS089785 Plant, Corn core (2014) USA, Illinois clusterVI CS,H,K,P,TH AFS062910 B.toyonensis AFS062910 Plant, Soybean core (2014) USA, Iowa clusterV CS,H,K,P,TH MOD1Bc106 B.cereus MOD1 Bc106 Other, Oxytetracycline Medicated Fish Feed (2006) USA, Maryland clusterIII CS,H,K,P,TH K8#2 B.cereus K8 (K8#2) Food, Korean fermented food (2016) South Korea clusterIV CS,H,K,P,TH AH621 B.c_group AH621 Soil, heather soil (1994) Norway, Singsaas/Saetereng clusterVI CS,H,K,P,TH,AFLP1,MLEE AFS058254 B.thuringiensis AFS058254 Plant, Soybean leaf (2014) USA, Minnesota clusterIV CS,H,K,P,TH AFS070947 B.cereus AFS070947 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS001450 B.toyonensis AFS001450 Plant, Corn (2014) USA, Iowa clusterV CS,H,K,P,TH AFS084233 B.cereus AFS084233 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH BGSC4BK1 B.thuringiensis balearica BGSC4BK1 Soil Spain clusterII CS,H,K,P,TH AFS029838 B.wiedmannii AFS029838 Plant, Corn core (2014) USA, Illinois clusterII CS,H,K,P,TH AFS027394 B.wiedmannii AFS027394 Plant, Soybean leaf (2014) USA, Minnesota clusterII CS,H,K,P,TH AFS006512 B.cereus AFS006512 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS095788 B.thuringiensis AFS095788 Plant, Soybean leaf (2014) USA, Minnesota clusterIV CS,H,K,P,TH AFS024615 B.thuringiensis AFS024615 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH VD118 B.c_group VD118 Soil Guadeloupe clusterVI CS,H,K,P,TH AFS003503 B.pseudomycoides AFS003503 Plant, Corn grain bin dust (2014) USA, Iowa conflicting CS,H,K,P,TH AFS008930 B.wiedmannii AFS008930 Plant, Soybean leaf (2014) USA, Minnesota clusterII CS,H,K,P,TH T13001 B.thuringiensis pakistani T13001 (Pak94) Animal, Insect, Lepidoptera (1976) Pakistan clusterIV CS,H,K,P,TH,AFLP3 1126_1 B.thuringiensis 1126_1 Soil (2017) China, Hebei Province clusterIV CS,H,K,P,TH NRRLB-23150 B.thuringiensis higo NRRLB-23150 Animal, Insect, Culicidae (Mosquitoes) (2013) UK conflicting CS,H,K,P,TH A0174 B.anthracis LSU174 (K1979, A0174, 74-412C-8) Animal, cattle (bovine) (1974) [pXO1+/pXO2-] Canada clusterIII CS,H,K,P,TH B4120 B.cereus B4120 Food (2013) Netherlands clusterIV CS,H,K,P,TH AFS065707 B.thuringiensis AFS065707 Soil (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS007186 B.thuringiensis AFS007186 Plant, Corn leaf (2014) USA, Illinois clusterIV CS,H,K,P,TH AFS044825 B.anthracis AFS044825 Plant, core (2014) USA, North Carolina clusterIII CS,H,K,P,TH DE0434 B.cereus DE0434 clusterIV CS,H,K,P,TH AFS031264 B.cereus AFS031264 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS089650 B.toyonensis AFS089650 Plant, Corn root (2014) USA, Iowa clusterV CS,H,K,P,TH AFS040105 B.cereus AFS040105 Plant, tree leaf (2014) USA, North Carolina conflicting CS,H,K,P,TH 781 B.anthracis BA781 clusterIII CS,H,K,P,TH AFS098141 B.pseudomycoides AFS098141 Plant, Corn core (2014) USA, Illinois conflicting CS,H,K,P,TH AFS029767 B.thuringiensis AFS029767 Plant, Soybean leaf (2014) USA, Minnesota clusterIV CS,H,K,P,TH AFS068289 B.cereus AFS068289 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS016726 B.cereus AFS016726 Soil (2014) USA, Iowa clusterVI CS,H,K,P,TH VU-DES13 B.toyonensis VU-DES13 Animal, Springtail/Collembola (Folsomia candida) midgut Netherlands, Amsterdam clusterV CS,H,K,P,TH ANSES88 B.anthracis ANSES88 clusterIII CS,H,K,P,TH AFS050593 B.toyonensis AFS050593 Plant, Corn core (2014) USA, Illinois clusterV CS,H,K,P,TH AFS030866 B.thuringiensis AFS030866 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH IMSNU10014 B.cereus IMSNU10014 Soil Korea clusterIV K AFS022169 B.cereus AFS022169 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH I8 B.wiedmannii I8 Soil, quaking grass (Briza maxima) undisturbed soil (2016) Israel, Ramat HaNadiv clusterII CS,H,K,P,TH SN1 B.tropicus SN1 Animal, Insect, European Corn Borer (Ostrinia nubilalis) (2018) Vietnam clusterIII CS,H,K,P,TH AFS018451 B.toyonensis AFS018451 Plant, Soybean core (2014) USA, Iowa clusterV CS,H,K,P,TH AFS061925 B.toyonensis AFS061925 Plant, Corn root (2014) USA, Iowa clusterV CS,H,K,P,TH AFS032723 B.thuringiensis AFS032723 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH 16-00183 B.cereus 16-00183 clusterIII CS,H,K,P,TH IMSNU12093 B.thuringiensis sotto IMSNU12093 (KCTC1519, NRRLB-4042) Animal, Insect, diseased silkworm clusterIV K AFS066501 B.cereus AFS066501 Food, Mushroom (2013) USA, Iowa clusterIV CS,H,K,P,TH AFS020540 B.cereus AFS020540 Plant, Corn core (2014) USA, Illinois clusterVI CS,H,K,P,TH BAG3X2-2 B.c_group BAG3X2-2 Soil USA, Massachusetts, Boston clusterIV CS,H,K,P,TH 14294-3 B.cereus 14294-3 (M6) Food, ice cream (2004) Germany clusterII CS,H,K,P,TH DSM12442 B.pseudomycoides type strain DSM12442 (NRRLB-617, WS3118, KCTC3862) Soil Ghana or Sweden or USA clusterI CS,H,K,P,TH,AFLP3 IS5056 B.thuringiensis thuringiensis IS5056 Soil (2005) Poland, Biebrza National Park clusterIV CS,H,K,P,TH AFS042581 B.wiedmannii AFS042581 Animal, earthworm (2013) USA, Minnesota clusterII CS,H,K,P,TH MOD1Bc113 B.cereus MOD1 Bc113 Other, Powdered Infant Formula (2015) USA, Maryland clusterIII CS,H,K,P,TH I176 B.cereus I176 Plant, Grass (2017) Israel, Karie Deshe clusterIV CS,H,K,P,TH AFS088016 B.thuringiensis AFS088016 Soil (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS087909 B.pseudomycoides AFS087909 (2014) USA, Iowa conflicting CS,H,K,P,TH AFS049517 B.toyonensis AFS049517 Plant, Corn core (2014) USA, Illinois clusterV CS,H,K,P,TH AFS015304 B.cereus AFS015304 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH MOD1Bc73 B.cereus MOD1 Bc73 Food, Paprika (2015) USA, Maryland conflicting CS,H,K,P,TH AFS040661 B.thuringiensis AFS040661 Plant, Corn leaf (2014) USA, Illinois clusterIV CS,H,K,P,TH BR145 B.thuringiensis BR145 Soil, soybean field (2010) Brazil, Parana, Bela Vista do Paraiso conflicting CS,H,K,P,TH AFS054589 B.wiedmannii AFS054589 Plant, Soybean core (2014) USA, Iowa clusterII CS,H,K,P,TH MOD1Bc177 B.cereus MOD1 Bc177 Human, Baby Wipes (2016) USA, Maryland clusterIII CS,H,K,P,TH ATCC35646 B.thuringiensis israelensis ATCC35646 (IMSNU12089, KB005, KCTC1509, HD522, BGSC4Q12) Other, raw sewage pond (1977) Israel, Kibbutz Hulda clusterIV CS,H,K,P,TH,AFLP3 BacAer B.toyonensis BacAer Human, biopsy of an epithelial lesion Brazil, Rio de Janeiro clusterV CS,H,K,P,TH SJ-S18 B.cereus SJ-S18 Human USA, Tennessee, Memphis clusterIV CS,H,K,P,TH Parent2 B.anthracis Parent2 USA clusterIII CS,H,K,P,TH AFS014496 B.toyonensis AFS014496 Soil (2014) USA, North Carolina clusterV CS,H,K,P,TH NZAS03 B.cereus NZAS03 Food, unpasteurized egg white (2015) New Zealand, Dunedin clusterII CS,H,K,P,TH AFS000517 B.thuringiensis AFS000517 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS017687 B.toyonensis AFS017687 Soil (2014) USA, Iowa clusterV CS,H,K,P,TH AFS095703 B.cereus AFS095703 Plant, Weed core (2014) USA, North Carolina clusterIV CS,H,K,P,TH PR05 B.anthracis PR05 USA clusterIII CS,H,K,P,TH AFS095135 B.pseudomycoides AFS095135 Plant, leaf (2014) USA, Indiana conflicting CS,H,K,P,TH AFS056055 B.toyonensis AFS056055 Plant, Soybean core (2014) USA, Iowa clusterV CS,H,K,P,TH BAG2X1-3 B.c_group BAG2X1-3 Soil USA, Massachusetts, Boston conflicting CS,H,K,P,TH AFS094730 B.thuringiensis AFS094730 Plant, Soybean leaf (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS064975 B.cereus AFS064975 (2014) USA, Iowa clusterIV CS,H,K,P,TH CH1 B.cytotoxicus CH 1 Food, Mashed potatoes (2015) Switzerland clusterVII CS,H,K,P,TH BtAlHakam B.thuringiensis Al Hakam (BtAlHakam) Other, suspected bioweapons facility Iraq clusterIII CS,H,K,P,TH G9241#2 B.cereus G9241#2 (G9241) Animal, fish from river (2013) [carries pXO1 plasmid with anthrax virulence genes and produces a polysaccharide capsule; two complete genomes sequenced for this strain with identical MLST sequences; strain named G9241 but sequences conflicting with isolate G9241#1 and different origin] Pakistan, Ravi River clusterIII CS,H,K,P,TH AFS039692 B.cereus AFS039692 Soil (2013) USA, North Carolina clusterIV CS,H,K,P,TH AFS011939 B.thuringiensis AFS011939 Plant, Soybean root (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS040392 B.thuringiensis AFS040392 Plant, Grass leaf (2013) USA, North Carolina clusterIV CS,H,K,P,TH AFS057001 B.wiedmannii AFS057001 Soil (2014) USA, New York clusterII CS,H,K,P,TH AFS023096 B.thuringiensis AFS023096 Plant, Soybean leaf (2014) USA, Minnesota clusterIV CS,H,K,P,TH AFS065631 B.thuringiensis AFS065631 Plant, core (2014) USA, North Carolina clusterIII CS,H,K,P,TH AFS049861 B.toyonensis AFS049861 Plant, Wheat plant (2014) USA, North Carolina clusterV CS,H,K,P,TH NMSW23 B.wiedmannii NMSW23 Soil, Turnip soil (2005) China, Tibet, Nyingchi clusterII CS,H,K,P,TH AFS056670 B.thuringiensis AFS056670 Plant, Corn grain bin dust (2013) USA, Iowa clusterIV CS,H,K,P,TH A0248 B.anthracis A0248 (K2802, 28, LSU248) Human (1968) [pXO1+/pXO2+] USA, Ohio clusterIII CS,H,K,P,TH,AFLP2 AFS078153 B.wiedmannii AFS078153 Animal, earthworm (2013) USA, Minnesota clusterII CS,H,K,P,TH LA2007 B.cereus LA2007 Human, blood and BAL (2007) USA, Louisiana, Galliano clusterIII CS,H,K,P,TH AFS011673 B.thuringiensis AFS011673 Plant, Soybean root (2013) USA, Illinois clusterIV CS,H,K,P,TH 121B B.cereus 121B clusterII CS,H,K,P,TH AFS073530 B.thuringiensis AFS073530 Plant, Soybean leaf (2014) USA, Iowa clusterIV CS,H,K,P,TH 2000032975 B.anthracis 2000032975 (1966) clusterIII CS,H,K,P,TH S3E15 B.mycoides S3E15 Soil (2016) Netherlands clusterVI CS,H,K,P,TH PR09-4 B.anthracis PR09-4 USA clusterIII CS,H,K,P,TH AFS099300 B.toyonensis AFS099300 Plant, core (2014) USA, North Carolina clusterV CS,H,K,P,TH KCTC1509 B.thuringiensis israelensis KCTC1509 (ATCC35646, HD522) Other, sewage [data from Ko et al. 2004, Infect. Immunity 72, 5253-5261; sequences conflicting with isolate ATCC35646] clusterIV K,P AFS054043 B.cereus AFS054043 Plant, Corn root (2014) USA, Iowa clusterVI CS,H,K,P,TH FSLW8-0523 B.cereus FSL W8-0523 Other, Blended liquid whey silo (2012) USA, New York clusterIII CS,H,K,P,TH Rock3-17 B.mycoides Rock3-17 Soil USA, Maryland, Rockville conflicting CS,H,K,P,TH MOD1Bc21 B.cereus MOD1 Bc21 Plant, Natural Sesame Seeds (2015) USA, Maryland clusterIV CS,H,K,P,TH AFS048015 B.cereus AFS048015 Plant, tree leaf (2014) USA, North Carolina conflicting CS,H,K,P,TH BGSC4AL1 B.thuringiensis coreanensis BGSC4AL1 (1994) South Korea conflicting CS,H,K,P,TH AFS010157 B.wiedmannii AFS010157 Plant, Corn core (2014) USA, Illinois clusterII CS,H,K,P,TH YGd22-03 B.thuringiensis YGd22-03 Soil (1992) China clusterIV CS,H,K,P,TH AFS072832 B.toyonensis AFS072832 Plant, Soybean root (2014) USA, Iowa clusterV CS,H,K,P,TH AFS043063 B.thuringiensis AFS043063 Plant, Soybean leaf (2014) USA, Minnesota clusterIV CS,H,K,P,TH AFS095077 B.pseudomycoides AFS095077 Soil (2014) USA, Iowa conflicting CS,H,K,P,TH AFS013213 B.thuringiensis AFS013213 Plant, Corn core (2014) USA, Illinois clusterIV CS,H,K,P,TH MOD1Bc174 B.cereus MOD1 Bc174 Food, Hybrid Tilapia (2007) USA, Maryland clusterIV CS,H,K,P,TH AFS090477 B.thuringiensis AFS090477 Plant, Soybean leaf (2014) USA, Minnesota clusterIV CS,H,K,P,TH 16-00174 B.cereus 16-00174 clusterIII CS,H,K,P,TH AFS048598 B.cereus AFS048598 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS033493 B.toyonensis AFS033493 Plant, Corn core (2014) USA, Illinois clusterV CS,H,K,P,TH AFS060105 B.cereus AFS060105 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS004252 B.toyonensis AFS004252 Plant, Soybean leaf (2014) USA, Minnesota clusterV CS,H,K,P,TH T07030 B.thuringiensis aizawai T07030 clusterIV CS,H,K,P,TH AFS059526 B.thuringiensis AFS059526 Plant, Corn grain bin dust (2013) USA, Iowa clusterIV CS,H,K,P,TH AFS082683 B.cereus AFS082683 Plant, Soybean leaf (2014) USA, Illinois clusterIV CS,H,K,P,TH DE0343 B.thuringiensis DE0343 conflicting CS,H,K,P,TH DE0191 B.cereus DE0191 clusterII CS,H,K,P,TH RU36C B.cereus RU36C clusterII CS,H,K,P,TH D17 B.cereus D17 (FRI13) [Food Research Institute, University of Wisconsin-Madison] USA, Wisconsin, Madison clusterIII CS,H,K,P,TH,AFLP2 AFS022655 B.anthracis AFS022655 Plant, Corn core (2014) USA, North Carolina clusterIII CS,H,K,P,TH DE0589 B.thuringiensis DE0589 conflicting CS,H,K,P,TH MOD1Bc60 B.cereus MOD1 Bc60 Human, Baby Wipes (2016) USA, Maryland clusterIII CS,H,K,P,TH GOE8 B.weihenstephanensis GOE8 Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014) Germany, Goettingen clusterVI CS,H,K,P,TH DE0074 B.cereus B4264 DE0074 clusterIV CS,H,K,P,TH FT9 B.cereus FT9 Other, hot springs Brazil, Goias, Caldas Novas clusterIII CS,H,K,P,TH AFS001073 B.cereus AFS001073 Plant, Weed leaf (2014) USA, Ohio clusterIV CS,H,K,P,TH AFS041003 B.cereus AFS041003 Plant, Tomato plant (2014) USA, North Carolina conflicting CS,H,K,P,TH VD021 B.c_group VD021 Other, Water from a small pond site Belgium clusterVI CS,H,K,P,TH FSLM7-0044 B.wiedmannii FSL M7-0044 Dairy products, raw milk (2011) USA, New York clusterII CS,H,K,P,TH AFS021943 B.wiedmannii AFS021943 Plant, Soybean leaf (2014) USA, Iowa clusterII CS,H,K,P,TH AFS090355 B.thuringiensis AFS090355 Plant, Corn core (2014) USA, Illinois clusterIV CS,H,K,P,TH IMSNU12078 B.cereus IMSNU12078 (ATCC21768, KCTC1014) Animal, chicken and turkey manure [data from Ko et al. 2004, Infect. Immunity 72, 5253-5261; sequences conflicting with isolate KCTC1014] clusterIII K Rock4-18 B.cereus Rock4-18 Soil USA, Maryland, Rockville clusterV CS,H,K,P,TH 16-00191 B.cereus 16-00191 clusterIII CS,H,K,P,TH AFS041177 B.toyonensis AFS041177 Plant, Weed leaf (2014) USA, Ohio clusterV CS,H,K,P,TH AFS066354 B.cereus AFS066354 Soil (2014) USA, North Carolina clusterIV CS,H,K,P,TH BGSC4X1 B.thuringiensis colmeri BGSC4X1 (1984) conflicting CS,H,K,P,TH GOE5#1 B.thuringiensis GOE5#1 Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014) Germany, Goettingen clusterV CS,H,K,P,TH AFS029508 B.thuringiensis AFS029508 Plant, Soybean leaf (2014) USA, Minnesota clusterIV CS,H,K,P,TH WH2015 B.cereus WH2015 Food, turbot (2015) China, Wuhan clusterIII CS,H,K,P,TH FSLK6-0267 B.cereus FSL K6-0267 Dairy products, Laboratory Heat Treated Raw Milk (2012) USA, New York clusterVI CS,H,K,P,TH HuB4-10 B.c_group HuB4-10 Soil Belgium clusterV CS,H,K,P,TH T07148 B.thuringiensis aizawai T07148 clusterIV CS,H,K,P,TH Lr4/2 B.cereus Lr4/2 clusterIV CS,H,K,P,TH AFS028516 B.cereus AFS028516 Plant, Corn leaf (2014) USA, Illinois clusterIV CS,H,K,P,TH AFS063338 B.wiedmannii AFS063338 Soil (2014) USA, Iowa clusterII CS,H,K,P,TH AFS097130 B.cereus AFS097130 Plant, Corn core (2014) USA, North Carolina conflicting CS,H,K,P,TH AFS025735 B.wiedmannii AFS025735 Soil (2014) USA, New York clusterII CS,H,K,P,TH 896BCER B.cereus 896 BCER Human USA, Washington clusterIII CS,H,K,P,TH P4-0-9 B.cereus P4-0-9 Other, environmental sample from landfill (2015) Hong Kong clusterIII CS,H,K,P,TH AFS067605 B.thuringiensis AFS067605 Food, Mushroom (2013) USA, Iowa clusterIV CS,H,K,P,TH MOD1Bc203 B.cereus MOD1 Bc203 Human, Baby Wipes (2016) USA, Maryland clusterIV CS,H,K,P,TH AFS071638 B.thuringiensis AFS071638 Plant, Soybean root (2013) USA, Minnesota clusterIV CS,H,K,P,TH AFS052350 B.toyonensis AFS052350 Soil (2014) USA, New York clusterV CS,H,K,P,TH MSX-A1 B.c_group MSX-A1 clusterIV CS,H,K,P,TH AFS081367 B.cereus AFS081367 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS055470 B.thuringiensis AFS055470 Plant, Soybean leaf (2014) USA, Minnesota clusterIV CS,H,K,P,TH COVASU B.anthracis COVASU clusterIII CS,H,K,P,TH Pollino B.anthracis Pollino Animal, cattle (bovine) carcass (2014) [from a bovine anthrax-burial site; pXO1+/pXO2+] Italy, Pollino National Park, Basilicata clusterIII CS,H,K,P,TH PFAB2 B.anthracis PFAB2 Other, hot water spring (2015) India, West Bengal, Asansol clusterIII CS,H,K,P,TH AFS076931 B.toyonensis AFS076931 Soil (2014) USA, Iowa clusterV CS,H,K,P,TH AFS041432 B.cereus AFS041432 Plant, Weed leaf (2014) USA, Ohio clusterVI CS,H,K,P,TH MS195 B.toyonensis MS195 Food, Mixed salad (2015) Germany, Kiel clusterV CS,H,K,P,TH HD1011 B.thuringiensis pondicheriensis HD1011 (1915) India clusterIII CS,H,K,P,TH,AFLP2 AFS018975 B.pseudomycoides AFS018975 Soil (2014) USA, New York conflicting CS,H,K,P,TH AFS075998 B.mycoides AFS075998 Plant, core (2014) USA, North Carolina clusterVI CS,H,K,P,TH AFS011918 B.cereus AFS011918 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH A0488 B.anthracis type strain LSU488 (K4596, A0488, ATCC14578, Vollum) Animal, cattle (cow) (1935) [pXO1+/pXO2+] UK, England, Oxfordshire clusterIII CS,H,K,P,TH,AFLP2 INRAC3 B.cereus INRA C3 Food, pasteurized carrot (1996) (1996) France, Vaucluse clusterIV CS,H,K,P,TH,AFLP3 AFS039118 B.pseudomycoides AFS039118 Plant, Corn leaf (2014) USA, Indiana clusterI CS,H,K,P,TH HD1002 B.thuringiensis israelensis HD1002 Other, Sewage Israel clusterIV CS,H,K,P,TH,AFLP2 SJ-S28 B.cereus SJ-S28 Human USA, Tennessee, Memphis conflicting CS,H,K,P,TH HZBCE-08 B.cereus HZBCE-08 Food, Fried fish (2015) China, Hangzhou clusterIII CS,H,K,P,TH AFS084669 B.weihenstephanensis AFS084669 Soil (2014) USA, New York clusterVI CS,H,K,P,TH AFS032503 B.wiedmannii AFS032503 Soil (2014) USA, New York clusterII CS,H,K,P,TH AFS091569 B.toyonensis AFS091569 Plant, Soybean root (2014) USA, Iowa clusterV CS,H,K,P,TH Shikan-NIID B.anthracis Shikan-NIID Animal, horse (1928) [pXO1+/pXO2+] Japan, Tokyo clusterIII CS,H,K,P,TH BGSC4J3 B.thuringiensis aizawai/pacificus HD133 (BGSC4J3, HDB-20) Animal, Insect, Indian meal moth (Plodia interpunctella) [three complete genomes sequenced for this strain with identical MLST sequences] UK, England clusterIV CS,H,K,P,TH T26 B.thuringiensis T26 Soil (2005) India, Tamil Nadu clusterIV CS,H,K,P,TH AFS045461 B.toyonensis AFS045461 Plant, Soybean core (2014) USA, Iowa clusterV CS,H,K,P,TH I7 B.mycoides I7 Soil, quaking grass (Briza maxima) undisturbed soil (2016) Israel, Ramat HaNadiv clusterVI CS,H,K,P,TH MBGJa3 B.cereus MBGJa3 Animal, Jackal Excreta (2016) India, New Delhi Zoological Park clusterIV CS,H,K,TH AFS028424 B.cereus AFS028424 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH MSX-D12 B.c_group MSX-D12 clusterIII CS,H,K,P,TH m1293 B.cereus m1293 (BPS-2, BGSC6A54) Dairy products, cream cheese (1987) Brazil clusterIII CS,H,K,P,TH AFS024024 B.wiedmannii AFS024024 Plant, Corn core (2014) USA, Illinois clusterII CS,H,K,P,TH A8 B.cereus A8 Plant, coffee root (2018) Vietnam clusterIV CS,H,K,P,TH AFS044532 B.cereus AFS044532 Plant, Corn root (2014) USA, Iowa clusterIV CS,H,K,P,TH TS2 B.cereus TS2 Other, Saltern sediment (2014) India, Tamil Nadu, Tuticorin (Thoothukudi) clusterIII CS,H,K,P,TH AFS079122 B.pseudomycoides AFS079122 Plant, Soybean core (2014) USA, Iowa conflicting CS,H,K,P,TH AFS061177 B.thuringiensis AFS061177 Plant, Soybean leaf (2014) USA, Illinois clusterIV CS,H,K,P,TH ATCC10987#1 B.cereus ATCC10987 (AH75, NRS248, 6A15, ATCC10987#1) Dairy products, Cheese (1930) Canada clusterIII CS,H,K,P,TH,AFLP1,AFLP3,MLEE SJ-S8 B.cereus SJ-S8 Human USA, Tennessee, Memphis clusterIV CS,H,K,P,TH BAG4X2-1 B.c_group BAG4X2-1 Soil USA, Massachusetts, Boston clusterV CS,H,K,P,TH AFS034468 B.cereus AFS034468 Soil (2014) USA, New York clusterII CS,H,K,P,TH AFS086321 B.cereus AFS086321 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS050801 B.toyonensis AFS050801 Soil (2014) USA, North Carolina clusterV CS,H,K,P,TH AFS092789 B.cereus AFS092789 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS053259 B.cereus AFS053259 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS081381 B.toyonensis AFS081381 Plant, Soybean root (2014) USA, Iowa clusterV CS,H,K,P,TH AFS026476 B.wiedmannii AFS026476 (2014) USA, Iowa clusterII CS,H,K,P,TH C15#2 B.thuringiensis C15#2 Soil (2017) USA, Texas, Galveston, East Beach clusterIV CS,H,K,P,TH AFS077416 B.cereus AFS077416 Plant, Weed plant (2014) USA, North Carolina conflicting CS,H,K,P,TH TYU3 B.toyonensis TYU3 Plant, Japanese yew (Taxus cuspidata) (2015) South Korea conflicting CS,H,K,P,TH AFS035117 B.toyonensis AFS035117 Plant, Grass core (2014) USA, Iowa clusterV CS,H,K,P,TH AFS096845 B.cereus AFS096845 Plant, Weed leaf (2014) USA, Indiana conflicting CS,H,K,P,TH AFS074234 B.wiedmannii AFS074234 Plant, Corn core (2014) USA, Illinois clusterII CS,H,K,P,TH INRABc05-F1 B.cereus INRA Bc05-F1 clusterII CS,H,K,P,TH,AFLP3 I62 B.cereus I62 Plant, Grass (2017) Israel, Ramat HaNadiv clusterIV CS,H,K,P,TH AFS027646 B.toyonensis AFS027646 Plant, Corn leaf (2014) USA, Illinois clusterV CS,H,K,P,TH NVH0883/00 B.cytotoxicus NVH0883-00 (NVH0883/00) Food, spices (2000) Norway clusterVII CS,H,K,P,TH,AFLP3 AFS005998 B.cereus AFS005998 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS005023 B.thuringiensis AFS005023 (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS038153 B.toyonensis AFS038153 Plant, core (2014) USA, North Carolina clusterV CS,H,K,P,TH R_3098/03 B.cereus R309803 (BGSC6A65, R_3098/03) Human, blood (2003) [human septicaemia] UK, England conflicting CS,H,K,P,TH AFS026185 B.pseudomycoides AFS026185 Plant, Corn (2014) USA, Minnesota conflicting CS,H,K,P,TH AFS014847 B.cereus AFS014847 Plant, Corn (2014) USA, Iowa clusterIV CS,H,K,P,TH T30001 B.thuringiensis medellin T30001 clusterIV CS,H,K,P,TH,AFLP3 B4078 B.cereus B4078 (2012) Netherlands clusterIII CS,H,K,P,TH Kafkas-100 B.anthracis Kafkas-100 Soil (2009) Turkey, Digor clusterIII CS,H,K,P,TH AFS031210 B.thuringiensis AFS031210 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS085606 B.cereus AFS085606 Soil (2014) USA, North Carolina clusterIV CS,H,K,P,TH A16 B.anthracis A16 [pXO1+/pXO2+] clusterIII CS,H,K,P,TH AFS092321 B.toyonensis AFS092321 Plant, tree leaf (2014) USA, North Carolina clusterV CS,H,K,P,TH MC67 B.weihenstephanensis MC67 Soil, mud [emetic toxin/cereulide producer] Denmark clusterVI CS,H,K,P,TH MB.20 B.cereus MB.20 Food (2014) Germany, Munich clusterIII CS,H,K,P,TH AFS063645 B.cereus AFS063645 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS033400 B.cereus AFS033400 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH MOD1Bc92 B.cereus MOD1 Bc92 Food, Whole Black Pepper (2015) USA, Maryland clusterIV CS,H,K,P,TH BGSC4H1 B.thuringiensis canadensis HD30 (BGSC4H1, CCEB566, DSM6107, Dch-T) Animal, Insect, Prominent moth (Notodonta aniera) Czechoslovakia or USSR clusterIII CS,H,K,P,TH AFS009420 B.toyonensis AFS009420 Plant, Soybean leaf (2014) USA, Minnesota clusterV CS,H,K,P,TH 062011msu B.cereus 062011 msu Animal, domestic sheep (Ovis aries) (2010) India, Tamil Nadu, Tirunelveli District, Maruthamputhur village near Alangulam Region clusterIII CS,H,K,P,TH BGSC4J2 B.thuringiensis aizawai BGSC4J2 Animal, Insect, Indian meal moth (Plodia interpunctella) UK, England clusterIV CS,H,K,P,TH AFS045887 B.cereus AFS045887 (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS076597 B.thuringiensis AFS076597 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS088431 B.cereus AFS088431 Soil (2014) USA, New York clusterVI CS,H,K,P,TH IPPBIOTSUC-C9F1 B.thuringiensis IPPBIOTSUC-C9F1 clusterIV CS,H,K,P,TH MOD1Bc219 B.cereus MOD1 Bc219 Human, Baby Wipes (2016) USA, Maryland clusterIV CS,H,K,P,TH AFS097554 B.toyonensis AFS097554 Plant, Corn core (2014) USA, Illinois clusterV CS,H,K,P,TH AFS056359 B.wiedmannii AFS056359 Plant, Weed plant (2014) USA, Indiana clusterII CS,H,K,P,TH FORC086 B.cereus FORC 086 Food, chives (2016) South Korea, Seoul clusterIV CS,H,K,P,TH AFS017475 B.anthracis AFS017475 Plant, Corn core (2014) USA, Illinois clusterIII CS,H,K,P,TH BHU1 B.cereus BHU1 Soil, Cropfield soil (2016) India clusterIV CS,H,K,P,TH MS464a B.cereus MS464a Food, Mixed salad (2015) Germany, Kiel clusterIII CS,H,K,P,TH AFS021466 B.cereus AFS021466 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS029396 B.wiedmannii AFS029396 Plant, Corn core (2014) USA, Illinois clusterII CS,H,K,P,TH BGSC4C3 B.thuringiensis alesti HD4 (BGSC4C3, 143) Animal, Insect, silkworm (Bombyx mori) France clusterIV CS,H,K,P,TH AFS057383 B.anthracis AFS057383 Plant, core (2014) USA, North Carolina conflicting CS,H,K,P,TH MOD1Bc189 B.cereus MOD1 Bc189 Human, Baby Wipes (2016) USA, Maryland clusterIII CS,H,K,P,TH AFS029792 B.cereus AFS029792 Soil (2014) USA, New York conflicting CS,H,K,P,TH AFS067803 B.cereus AFS067803 Plant, Corn leaf (2014) USA, Illinois conflicting CS,H,K,P,TH TH26 B.mycoides TH26 Soil core (2017) [from a boreal forest soil associated with permafrost thaw] USA, Alaska, Fairbanks clusterVI CS,H,K,P,TH AFS084242 B.toyonensis AFS084242 Animal, Insect, Japanese beetle (2013) USA, Illinois clusterV CS,H,K,P,TH MB.15 B.cereus MB.15 Food (2014) Germany, Munich clusterIII CS,H,K,P,TH AFS094922 B.thuringiensis AFS094922 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS088215 B.pseudomycoides AFS088215 Plant, Corn grain bin dust (2014) USA, Iowa conflicting CS,H,K,P,TH AFS058004 B.thuringiensis AFS058004 Plant, Corn grain bin dust (2013) USA, Iowa clusterIV CS,H,K,P,TH MYBT18246 B.thuringiensis MYBT18246 Animal, nematode (Caenorhabditis elegans) clusterIV CS,H,K,P,TH K4834 B.anthracis K4834 Animal, cattle (Bovine) (1997) Australia clusterIII CS,H,K,P,TH 08CEB44bac B.cytotoxicus AFSSA08CEB44bac (08CEB44bac) Food, cooked semolina (2008) [related to food poisoning] France clusterVII CS,H,K,P,TH NJ-W B.cereus NJ-W Soil (2014) China, Zhongshan mountain, Nanjing clusterIV CS,H,K,P,TH BGSC4AJ1 B.thuringiensis monterrey BGSC4AJ1#1 (AH1355, GM33, T28001) [produces a polyglutamate capsule resembling that of B.anthracis; three complete genomes sequenced for this strain with identical MLST sequences] Mexico clusterIII CS,H,K,P,TH,AFLP3 HuA2-1 B.c_group HuA2-1 Soil Belgium clusterVI CS,H,K,P,TH AFS017092 B.pseudomycoides AFS017092 Soil (2014) USA, New York conflicting CS,H,K,P,TH SJ-S9 B.cereus SJ-S9 Human USA, Tennessee, Memphis clusterIV CS,H,K,P,TH B4082 B.cereus B4082 Food (2013) Netherlands conflicting CS,H,K,P,TH AFS022086 B.thuringiensis AFS022086 Soil (2014) USA, New York clusterIV CS,H,K,P,TH Ba-8785/92-Geo B.anthracis Ba-8785/92-Geo Human, Patient ulcer (1992) Georgia clusterIII CS,H,K,P,TH DE0163 B.thuringiensis DE0163 clusterIII CS,H,K,P,TH BGSC4BV1 B.thuringiensis argentinensis BGSC4BV1 Argentina clusterII CS,H,K,P,TH T61001 B.thuringiensis sylvestriensis BGSC4BY1 (T61001, Pbt53) [sequences conflicting with isolate BGSC4BY1] clusterII CS,H,K,P,TH,AFLP3 AFS088199 B.cereus AFS088199 Plant, Corn core (2014) USA, Illinois clusterVI CS,H,K,P,TH DE0302 B.thuringiensis DE0302 clusterIV CS,H,K,P,TH AFS012367 B.pseudomycoides AFS012367 Plant, Soybean core (2014) USA, Iowa conflicting CS,H,K,P,TH AFS077115 B.wiedmannii AFS077115 Soil (2014) USA, New York clusterII CS,H,K,P,TH AFS012232 B.thuringiensis AFS012232 Plant, Weed plant (2014) USA, Indiana clusterIV CS,H,K,P,TH FSLH8-0488 B.cereus FSL H8-0488 Other, Water from hose connected to pond (2006) USA, New York clusterV CS,H,K,P,TH AFS024847 B.cereus AFS024847 Plant, Soybean core (2014) USA, Iowa conflicting CS,H,K,P,TH AFS092659 B.cereus AFS092659 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS038041 B.cereus AFS038041 Plant, Corn core (2014) USA, North Carolina conflicting CS,H,K,P,TH AFS002707 B.wiedmannii AFS002707 Plant, Soybean leaf (2014) USA, Illinois clusterII CS,H,K,P,TH FSLH7-0926 B.cereus FSL H7-0926 Dairy products, Pasteurized 2% milk (2005) USA, New York clusterVI CS,H,K,P,TH AFS054440 B.thuringiensis AFS054440 Plant, Soybean leaf (2014) USA, Minnesota clusterIV CS,H,K,P,TH AFS025854 B.thuringiensis AFS025854 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH 20SD B.anthracis 20SD Animal, domestic sheep (Ovis aries) (2009) [from an anthrax outbreak; pXO1+/pXO2+] South Africa, Mpumalanga Province, Standerton area clusterIII CS,H,K,P,TH BA1035 B.anthracis BA1035 Human, Clinical [pXO1+/pXO2+] South Africa clusterIII CS,H,K,P,TH AFS068780 B.toyonensis AFS068780 Other, excrement (2014) USA, Iowa clusterV CS,H,K,P,TH GOE3#2 B.weihenstephanensis GOE3#2 Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014) Germany, Goettingen clusterVI CS,H,K,P,TH AFS069564 B.cereus AFS069564 Plant, Corn root (2013) USA, Iowa clusterII CS,H,K,P,TH AFS055002 B.thuringiensis AFS055002 Plant, Corn core (2014) USA, Illinois clusterIV CS,H,K,P,TH AFS080155 B.thuringiensis AFS080155 Plant, Core Corn (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS073955 B.toyonensis AFS073955 Soil (2013) USA, North Carolina clusterV CS,H,K,P,TH AFS052419 B.wiedmannii AFS052419 Soil (2014) USA, New York clusterII CS,H,K,P,TH AFS093925 B.cereus AFS093925 Plant, Corn core (2014) USA, Illinois clusterIV CS,H,K,P,TH MOD1Bc69 B.cereus MOD1 Bc69 Food, Paprika (2015) USA, Maryland clusterIII CS,H,K,P,TH FJAT-13831 B.bingmayongensis type strain FJAT-13831 (CGMCC1.12043, DSM25427) Soil (2010) [soil on the Terracotta Warriors from the No. 1 pit of the Mausoleum of the First Qin Emperor] China, Shaanxi, Xi-an City conflicting CS,H,K,P,TH IMSNU11014 B.cereus IMSNU11014 Soil Korea clusterII K AFS068756 B.cereus AFS068756 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS099506 B.thuringiensis AFS099506 Plant, Corn root (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS048989 B.cereus AFS048989 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH MOD1Bc68 B.cereus MOD1 Bc68 Food, Black Pepper Powder (2015) USA, Maryland clusterIV CS,H,K,P,TH MOD1Bc139 B.cereus MOD1 Bc139 Food, Dietary Supplements (2015) USA, Maryland clusterIV CS,H,K,P,TH Gnyt1 B.mycoides Gnyt1 Soil (2014) China, Zhuaxixiulong township, Tianzhu county, Wuwei city clusterVI CS,H,K,P,TH BGSC4AC1 B.thuringiensis mexicanensis BGSC4AC1 Soil (1988) Mexico clusterIII CS,H,K,P,TH T03a001 B.thuringiensis kurstaki T03a001 Animal, Insect, Mediterranean flour moth/mill moth (Ephestia kuhniella/Anagasta kuehniella) (1962) France conflicting CS,H,K,P,TH AFS031162 B.toyonensis AFS031162 Plant, Corn core (2014) USA, Illinois clusterV CS,H,K,P,TH IPPBIOTSUC1012 B.thuringiensis IPPBIOTSUC1012 Soil, forest park (2011) China, Beijing clusterIV CS,H,K,P,TH YWC2-8 B.thuringiensis YWC2-8 Soil (2007) China, Hailuo Glacier virgin forest, Sichuan basin conflicting CS,H,K,P,TH F34 B.anthracis F34 Other, salt lake (2016) Algeria, Ain Baida-Ouargla clusterIII CS,H,K,P,TH AFS018041 B.cereus AFS018041 Soil (2014) USA, New York clusterIV CS,H,K,P,TH AFS085583 B.anthracis AFS085583 Plant, Corn core (2014) USA, North Carolina clusterIII CS,H,K,P,TH AFS097065 B.toyonensis AFS097065 Plant, Corn root (2014) USA, Iowa clusterV CS,H,K,P,TH AFS093282 B.cereus AFS093282 Soil (2014) USA, North Carolina clusterIII CS,H,K,P,TH AFS003097 B.thuringiensis AFS003097 (2014) USA, North Carolina clusterIV CS,H,K,P,TH ANSES94 B.anthracis ANSES94 clusterIII CS,H,K,P,TH AFS003117 B.cereus AFS003117 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS016448 B.toyonensis AFS016448 Plant, Weed plant (2014) USA, Indiana clusterV CS,H,K,P,TH ZB201708 B.cereus ZB201708 Soil (2017) China clusterIV CS,H,K,P,TH AFS040627 B.cereus AFS040627 Soil (2013) USA, North Carolina clusterII CS,H,K,P,TH AFS048126 B.wiedmannii AFS048126 Plant, Corn root (2014) USA, Iowa clusterII CS,H,K,P,TH VDM053 B.c_group VDM053 Other, Water from a small pond site Belgium clusterVI CS,H,K,P,TH AFS064122 B.pseudomycoides AFS064122 Other, excrement (2014) USA, Iowa conflicting CS,H,K,P,TH AFS000753 B.toyonensis AFS000753 Plant, Soybean leaf (2014) USA, Illinois clusterV CS,H,K,P,TH AFS045348 B.cereus AFS045348 Plant, core (2014) USA, North Carolina conflicting CS,H,K,P,TH MOD1Bc85 B.cereus MOD1 Bc85 Food, Ground Black Pepper (2015) USA, Maryland clusterIV CS,H,K,P,TH AFS030475 B.cereus AFS030475 (2014) USA, Iowa conflicting CS,H,K,P,TH MOD1Bc181 B.cereus MOD1 Bc181 Human, Baby Wipes (2016) USA, Maryland clusterIII CS,H,K,P,TH AFS083043 B.cereus AFS083043 Plant, tree leaf (2014) USA, North Carolina conflicting CS,H,K,P,TH 4049 B.nitratireducens type strain 4049 (MCCC1A00732, KCTC33713, LMG28871) Other, sediments (2001) Pacific Ocean clusterVI CS,H,K,P,TH AFS040106 B.cereus AFS040106 Plant, Corn core (2014) USA, North Carolina conflicting CS,H,K,P,TH AFS054473 B.pseudomycoides AFS054473 Plant, Corn core (2014) USA, North Carolina clusterI CS,H,K,P,TH BGSC4T1 B.thuringiensis wuhanensis HD525 (BGSC4T1) Soil (1976) China clusterIV CS,H,K,P,TH AFS096149 B.wiedmannii AFS096149 Plant, Corn grain bin dust (2013) USA, Iowa clusterII CS,H,K,P,TH BAG2O-3 B.c_group BAG2O-3 Soil USA, Massachusetts, Boston clusterII CS,H,K,P,TH AFS046104 B.cereus AFS046104 Plant, core (2014) USA, North Carolina clusterVI CS,H,K,P,TH G25-42 B.thuringiensis G25-42 Soil (2012) USA clusterIII CS,H,K,P,TH AFS089089 B.thuringiensis AFS089089 Plant, Corn grain bin dust (2013) USA, Iowa clusterIV CS,H,K,P,TH YC-10 B.thuringiensis YC-10 (CCTCC M2010023) Plant, tobacco roots (2010) China, Hunan Province conflicting CS,H,K,P,TH AFS015017 B.toyonensis AFS015017 Plant, Corn core (2014) USA, Illinois clusterV CS,H,K,P,TH AFS094460 B.cereus AFS094460 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS074395 B.cereus AFS074395 Plant, tree leaf (2014) USA, North Carolina conflicting CS,H,K,P,TH AFS022373 B.wiedmannii AFS022373 Soil (2014) USA, New York clusterII CS,H,K,P,TH AFS072260 B.cereus AFS072260 Soil (2014) USA, New York clusterVI CS,H,K,P,TH AFS044195 B.anthracis AFS044195 Plant, tree leaf (2013) USA, North Carolina clusterIII CS,H,K,P,TH CH2 B.cytotoxicus CH 2 Food, Mashed potatoes (2015) Switzerland clusterVII CS,H,K,P,TH C15#1 B.thuringiensis C15#1 Soil (1970) [spore crystal association (SCA) phenotype] China clusterIV CS,H,K,P,TH AFS064999 B.thuringiensis AFS064999 Plant, Soybean leaf (2014) USA, Minnesota clusterIV CS,H,K,P,TH AFS065400 B.thuringiensis AFS065400 Soil (2014) USA, New York conflicting CS,H,K,P,TH AFS018668 B.cereus AFS018668 Plant, Corn core (2014) USA, North Carolina conflicting CS,H,K,P,TH BAG2O-1 B.c_group BAG2O-1 Soil USA, Massachusetts, Boston conflicting CS,H,K,P,TH I175 B.cereus I175 Plant, Grass (2017) Israel, Karie Deshe clusterIV CS,H,K,P,TH ATCC11950 B.cereus W (ATCC11950) Soil [carries the prophage W; W and its lytic variant, phage gamma, infect B.anthracis] clusterIII CS,H,K,P,TH AFS010272 B.cereus AFS010272 Plant, Corn core (2014) USA, Illinois clusterIV CS,H,K,P,TH RIVMBC90 B.cereus RIVMBC90 (PAL5) Human, faeces/stools (1999) [diarrheal food poisoning outbreak] Netherlands clusterIII CS,H,K,P,TH,AFLP3 DE0340 B.mycoides DE0340 clusterVI CS,H,K,P,TH AFS036336 B.thuringiensis AFS036336 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS000414 B.wiedmannii AFS000414 Plant, Corn core (2014) USA, Illinois clusterII CS,H,K,P,TH F95/8201 B.cereus 95/8201 (F95/8201) Human, endocarditis; Prince Charles Hospital (1995) UK, Wales, Merthyr Tydfil clusterIII CS,H,K,P,TH AFS080060 B.wiedmannii AFS080060 Plant, Corn root (2014) USA, Iowa clusterII CS,H,K,P,TH MOD1Bc59 B.cereus MOD1 Bc59 Human, Baby Wipes (2016) USA, Maryland clusterIII CS,H,K,P,TH AFS016919 B.thuringiensis AFS016919 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH BGSC4AY1 B.thuringiensis brasilensis BGSC4AY1 (AH1356, T39001) Food, black pepper powder Brazil clusterIII CS,H,K,P,TH,AFLP3 A8S3 B.cereus A8S3 Other, Sediments (2003) Pacific Ocean clusterIV CS,H,K,P,TH AFS000393 B.cereus AFS000393 Plant, Corn root (2014) USA, Iowa clusterVI CS,H,K,P,TH AFS038776 B.wiedmannii AFS038776 Animal, earthworm (2013) USA, Minnesota clusterII CS,H,K,P,TH AFS019247 B.cereus AFS019247 Plant, Corn (2014) USA, Iowa conflicting CS,H,K,P,TH AFS059087 B.cereus AFS059087 Soil (2014) USA, New York clusterVI CS,H,K,P,TH AFS022028 B.thuringiensis AFS022028 Plant, Soybean leaf (2014) USA, Minnesota clusterIV CS,H,K,P,TH AFS066156 B.wiedmannii AFS066156 Plant, core (2014) USA, North Carolina clusterII CS,H,K,P,TH AFS086961 B.thuringiensis AFS086961 Soil (2014) USA, New York clusterIV CS,H,K,P,TH HD571 B.thuringiensis kyushuensis DSM6080 (HD571) Japan clusterIII CS,H,K,P,TH,AFLP2 AFS065816 B.cereus AFS065816 Plant, Weed leaf (2014) USA, Indiana clusterIV CS,H,K,P,TH AFS067935 B.cereus AFS067935 Plant, Weed core (2014) USA, North Carolina clusterIV CS,H,K,P,TH FSLP4-0569 B.wiedmannii FSL P4-0569 Dairy food in process (2010) USA, New York clusterII CS,H,K,P,TH AFS011006 B.cereus AFS011006 Plant, Soybean leaf (2013) USA, Minnesota clusterIV CS,H,K,P,TH AH1273 B.cereus AH1273 Human, blood; Reykjavik University Hospital (1997) [from the same hospital as isolates AH1270, AH1271, and AH1272] Iceland, Reykjavik clusterVI CS,H,K,P,TH VD146 B.c_group VD146 Soil UK, Scotland clusterVI CS,H,K,P,TH AFS082409 B.cereus AFS082409 Plant, core (2014) USA, North Carolina conflicting CS,H,K,P,TH Carbosap B.anthracis Carbosap [attenuated, toxigenic, capsulated strain; shows significant attenuation of virulence; used in Italy as a live spore vaccine for cattle and sheep; pXO1+/pXO2+; two complete genomes sequenced for this strain with identical MLST sequences between] Somalia, Asmara, Institute Vacci nogeno or Italy, Rome clusterIII CS,H,K,P,TH AFS083341 B.cereus AFS083341 Soil (2014) USA, New York clusterVI CS,H,K,P,TH FSLW8-0003 B.cereus FSL W8-0003 Dairy products, Ricotta/mozzarella whey (2012) USA, New York clusterIII CS,H,K,P,TH 03BB87 B.cereus 2002734342 (03BB87) Human, blood (2003) [human fatal pneumonia; carries pXO1 plasmid with anthrax virulence genes and produces a polysaccharide capsule] USA, Texas clusterIII CS,H,K,P,TH BGSC4Y1 B.thuringiensis tochigiensis BGSC4Y1 (117-72, HD868, AH460) Other, soil or litter of silkworm (Bombyx mori) Japan clusterIII CS,H,K,P,TH,AFLP2 AFS053584 B.toyonensis AFS053584 Plant, Corn root (2014) USA, Iowa clusterV CS,H,K,P,TH AFS036437 B.thuringiensis AFS036437 Food, Mushroom (2013) USA, Iowa clusterIV CS,H,K,P,TH DNG9 B.thuringiensis DNG9 Other, oil-contaminated slough (2013) Algeria, Baraki-Alger clusterIV CS,H,K,P,TH AFS066836 B.thuringiensis AFS066836 Soil (2014) USA, Iowa clusterIV CS,H,K,P,TH 4599 B.anthracis Heroin Ba4599 (Ba4599) Human, Scottish heroin user (2009) UK, Scotland, Glasgow clusterIII CS,H,K,P,TH AFS058633 B.anthracis AFS058633 Plant, Corn core (2014) USA, North Carolina clusterIII CS,H,K,P,TH AFS076104 B.cereus AFS076104 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS005615 B.cereus AFS005615 Plant, leaf (2014) USA, North Carolina conflicting CS,H,K,P,TH VDM062 B.c_group VDM062 Soil UK, Scotland clusterVI CS,H,K,P,TH NEU1062 B.paranthracis NEU 1062 Soil (1983) Switzerland, Bern clusterIII CS,H,K,P,TH AFS086630 B.toyonensis AFS086630 Plant, core (2014) USA, North Carolina clusterV CS,H,K,P,TH MRIK1 B.cereus MRIK1 Soil (2013) India, Majuli River Island, Assam clusterIV CS,H,K,P,TH HM-311 B.thuringiensis HM-311 Soil (2018) China, Xinjiang Uyghur Autonomous Region clusterIV CS,H,K,P,TH ANSES101 B.anthracis ANSES101 clusterIII CS,H,K,P,TH LCR12 B.cereus LCR12 Plant, karkalla (Carpobrotus rossii) (2014) [from Cadmium-contaminated soil] Australia, Melbourne clusterIV CS,H,K,P,TH AFS022658 B.thuringiensis AFS022658 Plant, Soybean leaf (2014) USA, Illinois clusterIV CS,H,K,P,TH AFS063129 B.pseudomycoides AFS063129 Plant, Corn core (2014) USA, Illinois clusterI CS,H,K,P,TH AFS011659 B.thuringiensis AFS011659 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS059886 B.cereus AFS059886 Plant, Corn core (2014) USA, Illinois conflicting CS,H,K,P,TH AFS041803 B.cereus AFS041803 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS047635 B.thuringiensis AFS047635 Plant, Soybean leaf (2014) USA, Minnesota clusterIV CS,H,K,P,TH HuB4-4 B.c_group HuB4-4 Soil Belgium clusterIV CS,H,K,P,TH AFS023506 B.thuringiensis AFS023506 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH FDAARGOS341 B.anthracis FDAARGOS 341 Other, Colorado Serum Co., Anthrax Spore Vaccine (2015) clusterIII CS,H,K,P,TH MOD1Bc56 B.cereus MOD1 Bc56 Human, Baby Wipes (2016) USA, Maryland clusterIII CS,H,K,P,TH I141 B.cereus I141 Plant, Grass (2017) Israel, Karie Deshe clusterIV CS,H,K,P,TH BGSC4BQ1 B.thuringiensis asturiensis BGSC4BQ1 Soil Spain clusterVI CS,H,K,P,TH 2000032832 B.anthracis 2000032832 clusterIII CS,H,K,P,TH AFS009283 B.cereus AFS009283 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS056099 B.cereus AFS056099 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH BGSC4AQ1 B.thuringiensis seoulensis BGSC4AQ1 (T35001) Soil South Korea clusterV CS,H,K,P,TH,AFLP3 AFS007396 B.cereus AFS007396 Soil (2014) USA, North Carolina clusterVI CS,H,K,P,TH BGSC4D1 B.thuringiensis kurstaki BGSC4D1 (HD1, AH248, KB004) Animal, Insect, diseased larvae of Pink Bollworm (Pectinophora gossypiella) (1970) [sequences conflicting with isolates HD1#1, HD1#2, and HD1#3] USA, Texas, Brownsville conflicting CS,H,K,P,TH Ames B.anthracis Ames Porton [pXO1-/pXO2-; Ames strain cured of the pXO1 and pXO2 plasmids at UK Defence Science and Technology Laboratory] UK, England, Porton Down clusterIII CS,H,K,P,TH Parent1 B.anthracis Parent1 USA clusterIII CS,H,K,P,TH AFS026312 B.cereus AFS026312 Soil (2014) USA, New York clusterII CS,H,K,P,TH 16-00184 B.cereus 16-00184 clusterIV CS,H,K,P,TH AFS024404 B.cereus AFS024404 Soil (2014) USA, New York clusterII CS,H,K,P,TH JCM15802 B.manliponensis type strain JCM15802 (MCCC1A00708, BL4-6, KCTC13319) Other, Yellow Sea tidal flat sediment (2011) conflicting CS,H,K,P,TH AFS045814 B.thuringiensis AFS045814 (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS036086 B.cereus AFS036086 Plant, Weed core (2014) USA, North Carolina clusterII CS,H,K,P,TH AFS030115 B.wiedmannii AFS030115 Plant, Corn root (2014) USA, Iowa clusterII CS,H,K,P,TH TI B.anthracis Tsiankovskii-I (TI) [Soviet Union livestock vaccine strain; pXO1+/pXO2+] USSR clusterIII CS,H,K,P,TH MOD1Bc208 B.cereus MOD1 Bc208 Human, Baby Wipes (2016) USA, Maryland clusterIV CS,H,K,P,TH AFS053272 B.cereus AFS053272 Soil (2014) USA, North Carolina clusterVI CS,H,K,P,TH AFS044547 B.cereus AFS044547 Soil (2014) USA, Iowa clusterIV CS,H,K,P,TH BAM B.thuringiensis BAM Soil (2018) USA, New Hampshire, Hanover, park adjacent to Geisel Medical School clusterIV CS,H,K,P,TH ach14 B.cereus ach14 clusterIV CS,H,K,P,TH AFS041242 B.cereus AFS041242 Soil (2014) USA, New York clusterII CS,H,K,P,TH AFS001713 B.anthracis AFS001713 Plant, core (2014) USA, North Carolina clusterIII CS,H,K,P,TH AFS031287 B.cereus AFS031287 Soil (2014) USA, New York clusterVI CS,H,K,P,TH MOD1Bc235 B.cereus MOD1 Bc235 Food, food product (2016) USA, Maryland conflicting CS,H,K,P,TH G12 B.cereus G12 Food, cucumber (2015) Germany, Kiel clusterIII CS,H,K,P,TH AFS014598 B.cereus AFS014598 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH Rock3-42 B.cereus Rock3-42 Soil USA, Maryland, Rockville clusterIII CS,H,K,P,TH AFS067272 B.cereus AFS067272 Plant, Weed plant (2014) USA, North Carolina conflicting CS,H,K,P,TH AFS020694 B.wiedmannii AFS020694 Plant, Soybean core (2014) USA, Iowa clusterII CS,H,K,P,TH AFS061448 B.cereus AFS061448 Soil (2013) USA, North Carolina clusterIV CS,H,K,P,TH AFS020690 B.wiedmannii AFS020690 Food, Mushroom (2013) USA, Iowa clusterII CS,H,K,P,TH AFS085794 B.cereus AFS085794 Plant, Corn leaf (2014) USA, Illinois conflicting CS,H,K,P,TH 261-1 B.thuringiensis 261-1 Soil (2003) China, Hebei, Baoding clusterIII CS,H,K,P,TH NZAS02 B.cereus NZAS02 Food, pasteurized egg white (2015) New Zealand, Dunedin clusterII CS,H,K,P,TH AFS009197 B.wiedmannii AFS009197 Soil (2014) USA, New York clusterII CS,H,K,P,TH AFS016024 B.anthracis AFS016024 Soil (2014) USA, North Carolina clusterIII CS,H,K,P,TH F3175/03 B.cereus F3175/03 Human, faeces/stools (2004) [human diarrhea] clusterIV CS,H,K,P,TH AFS053236 B.wiedmannii AFS053236 Plant, Corn root (2014) USA, Iowa clusterII CS,H,K,P,TH AFS070615 B.toyonensis AFS070615 Plant, Weed leaf (2014) USA, Indiana clusterV CS,H,K,P,TH AFS098742 B.cereus AFS098742 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH B26 B.mycoides B26 Food, Salad leaves (2015) Germany, Kiel clusterVI CS,H,K,P,TH GOE2#1 B.thuringiensis GOE2#1 Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014) Germany, Goettingen conflicting CS,H,K,P,TH PR06 B.anthracis PR06 USA clusterIII CS,H,K,P,TH AFS034708 B.thuringiensis AFS034708 Plant, core (2014) USA, North Carolina conflicting CS,H,K,P,TH T07183 B.thuringiensis aizawai T07183 clusterIV CS,H,K,P,TH AFS033477 B.toyonensis AFS033477 Plant, Corn core (2014) USA, North Carolina clusterV CS,H,K,P,TH AFS025485 B.cereus AFS025485 Plant, Corn (2014) USA, Iowa clusterIV CS,H,K,P,TH BGSC4BX1 B.thuringiensis pingluonsis BGSC4BX1 Soil, sandy soil China clusterIII CS,H,K,P,TH AFS033741 B.cereus AFS033741 Plant, Oats plant (2014) USA, North Carolina clusterIV CS,H,K,P,TH 820BCER B.cereus 820 BCER Human USA, Washington clusterIV CS,H,K,P,TH CVCS1 B.cereus CVC S1 Human, central venous catheter (2013) Pakistan, Lahore clusterIII CS,H,K,P,TH AFS019545 B.thuringiensis AFS019545 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH INRAZB5-J B.cereus INRA ZB5-J clusterII CS,H,K,P,TH,AFLP3 16-00177 B.cereus 16-00177 clusterII CS,H,K,P,TH MHI86 B.cereus MHI 86 Food, infant food Germany clusterIII CS,H,K,P,TH AFS079629 B.cereus AFS079629 (2014) USA, North Carolina clusterII CS,H,K,P,TH AFS071099 B.wiedmannii AFS071099 Plant, Soybean leaf (2014) USA, Minnesota clusterII CS,H,K,P,TH K2883 B.anthracis K2883 Human (1997) India clusterIII CS,H,K,P,TH AFS036998 B.wiedmannii AFS036998 Soil (2014) USA, New York clusterII CS,H,K,P,TH AFS006334 B.cereus AFS006334 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS055648 B.cereus AFS055648 Plant, Corn core (2014) USA, North Carolina conflicting CS,H,K,P,TH HD11 B.thuringiensis aizawai HD11 (T07001, BGSC4J4, HA3, HD114, HD227) Animal, Insect, Oriental Tobacco Budworm/Cape Gooseberry Budworm (Heliothis assulta/Helicoverpa assulta) Japan clusterIV CS,H,K,P,TH,AFLP2,AFLP3 AFS093126 B.thuringiensis AFS093126 Soil (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS024499 B.toyonensis AFS024499 Plant, Wheat plant (2014) USA, North Carolina clusterV CS,H,K,P,TH AFS083030 B.cereus AFS083030 Plant, Corn core (2014) USA, Illinois conflicting CS,H,K,P,TH Lr7/2 B.thuringiensis Lr7/2 Other, Water (2011) Chile, Lirima thermal springs clusterIV CS,H,K,P,TH AFS096410 B.thuringiensis AFS096410 Plant, Corn leaf (2014) USA, Illinois clusterIV CS,H,K,P,TH AFS078111 B.toyonensis AFS078111 Plant, Soybean leaf (2014) USA, Minnesota clusterV CS,H,K,P,TH ATCC33679 B.thuringiensis kurstaki ATCC33679 (KCTC1507, AH1084, NRRLB-3792, HD1) Animal, diseased insect larvae [sequences conflicting with isolates BGSC4D1, HD1#1, HD1#2, and HD1#3] clusterIV K,P,AFLP1,AFLP2,AFLP3,MLEE CVUAS2833 B.cytotoxicus CVUAS2833 Food, potato puree (2007) [related to food poisoning] Germany clusterVII CS,H,K,P,TH AFS050027 B.cereus AFS050027 Soil (2014) USA, New York clusterVI CS,H,K,P,TH DE0502 B.thuringiensis DE0502 conflicting CS,H,K,P,TH AFS052676 B.thuringiensis AFS052676 Plant, Soybean leaf (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS070925 B.pseudomycoides AFS070925 Plant, Corn core (2014) USA, Illinois clusterI CS,H,K,P,TH K1285 B.anthracis K1285 (93/37, A0188) [pXO1+/pXO2+] Namibia clusterIII CS,H,K,P,TH,AFLP2 AFS039823 B.toyonensis AFS039823 Soil (2014) USA, New York clusterV CS,H,K,P,TH B4085 B.cereus B4085 Food (2013) Netherlands clusterIII CS,H,K,P,TH AFS023898 B.cereus AFS023898 Plant, Corn core (2014) USA, Illinois clusterIV CS,H,K,P,TH MOD1Bc214 B.cereus MOD1 Bc214 Human, Baby Wipes (2016) USA, Maryland clusterIII CS,H,K,P,TH S612 B.cereus S612 Other, groundwater (2015) USA clusterII CS,H,K,P,TH DE0100 B.cereus DE0100 clusterIV CS,H,K,P,TH A24 B.cereus A24 Plant, black pepper plant root (2018) Vietnam clusterIV CS,H,K,P,TH AFS077649 B.cereus AFS077649 Soil (2014) USA, New York clusterII CS,H,K,P,TH AFS071466 B.wiedmannii AFS071466 Plant, Corn core (2014) USA, Illinois clusterII CS,H,K,P,TH AFS075176 B.toyonensis AFS075176 Plant, Corn leaf (2014) USA, Illinois clusterV CS,H,K,P,TH AFS071939 B.thuringiensis AFS071939 Plant, Weed core (2014) USA, North Carolina clusterIV CS,H,K,P,TH VD115 B.c_group VD115 Soil Guadeloupe clusterV CS,H,K,P,TH MOD1Bc20 B.cereus MOD1 Bc20 Food, Paprika (2015) USA, Maryland clusterIII CS,H,K,P,TH AFS061996 B.cereus AFS061996 (2014) USA, North Carolina clusterIII CS,H,K,P,TH AFS025179 B.toyonensis AFS025179 Plant, Corn core (2014) USA, Illinois clusterV CS,H,K,P,TH 8A B.cereus 8A Soil (2001) Brazil, Santana hill in Porto Alegre conflicting CS,H,K,P,TH FSLM7-1251 B.wiedmannii FSL M7-1251 Dairy products, raw milk (2011) USA, New York clusterII CS,H,K,P,TH MOD1Bc220 B.cereus MOD1 Bc220 Food, food product (2016) USA, Maryland clusterIII CS,H,K,P,TH MB.8 B.cereus MB.8 Food (2014) Germany, Munich clusterIII CS,H,K,P,TH AFS031783 B.cereus AFS031783 Plant, Soybean leaf (2014) USA, Minnesota clusterI CS,H,K,P,TH AFS032644 B.pseudomycoides AFS032644 Plant, Corn (2014) USA, Iowa clusterI CS,H,K,P,TH BAG1X1-2 B.c_group BAG1X1-2 Soil USA, Massachusetts, Boston clusterIV CS,H,K,P,TH AFS051208 B.toyonensis AFS051208 Plant, Weed plant (2014) USA, Indiana clusterV CS,H,K,P,TH DE0281 B.nitratireducens DE0281 clusterVI CS,H,K,P,TH 2000031709 B.anthracis 2000031709 (1956) USA, Carolinas clusterIII CS,H,K,P,TH AFS022504 B.thuringiensis AFS022504 Plant, Corn core (2014) USA, Illinois clusterIV CS,H,K,P,TH PG17 B.albus PG 17 Other, phosphogypsum piles (2018) Tunisia, Gafsa clusterII CS,H,K,P,TH AFS039264 B.toyonensis AFS039264 Plant, Soybean core (2014) USA, Iowa clusterV CS,H,K,P,TH LLCG23 B.wiedmannii LLCG23 Soil (2005) China, Tibet clusterII CS,H,K,P,TH AFS047152 B.cereus AFS047152 Soil (2014) USA, New York clusterVI CS,H,K,P,TH Kafkas-68 B.anthracis Kafkas-68 Animal, Cattle (2007) Turkey, Kars clusterIII CS,H,K,P,TH AFS041580 B.anthracis AFS041580 Plant, core (2014) USA, North Carolina clusterIII CS,H,K,P,TH AFS085011 B.thuringiensis AFS085011 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS060304 B.anthracis AFS060304 Plant, Wheat plant (2014) USA, North Carolina clusterIII CS,H,K,P,TH DE0029 B.cereus DE0029 clusterIV CS,H,K,P,TH AFS086130 B.toyonensis AFS086130 Plant, Corn grain bin dust (2013) USA, Iowa clusterV CS,H,K,P,TH AFS033081 B.cereus AFS033081 Animal, Insect, beetle (2013) USA, North Carolina clusterIV CS,H,K,P,TH c-21 B.thuringiensis c-21 Animal, ob/ob mouse animal manure (2016) China, Beijing clusterIV CS,H,K,P,TH AFS022121 B.toyonensis AFS022121 Plant, Soybean core (2014) USA, Iowa clusterV CS,H,K,P,TH RIVMBC120 B.cereus RIVMBC120 (INRA399) [diarrheal food poisoning] clusterII CS,H,K,P,TH,AFLP3 AFS087218 B.cereus AFS087218 Soil (2014) USA, North Carolina conflicting CS,H,K,P,TH AFS026926 B.thuringiensis AFS026926 Soil (2014) USA, Iowa clusterIV CS,H,K,P,TH 663 B.anthracis BA663 clusterIII CS,H,K,P,TH AFS092012 B.pseudomycoides AFS092012 Plant, Corn leaf (2014) USA, Illinois clusterI CS,H,K,P,TH AFS056615 B.thuringiensis AFS056615 Plant, Soybean leaf (2014) USA, Missouri clusterIV CS,H,K,P,TH AFS013151 B.wiedmannii AFS013151 Plant, Corn root (2014) USA, Iowa clusterII CS,H,K,P,TH N35-10-2 B.albus type strain N35-10-2 (MCCC1A02146, KCTC33710, LMG28875) Other, sediments (2002) China, South China Sea clusterII CS,H,K,P,TH FSLK6-0069 B.wiedmannii FSL K6-0069 Dairy products, Laboratory Heat Treated Raw Milk (2012) USA, New York clusterII CS,H,K,P,TH A0442 B.anthracis LSU442 (K6835, A0442, 28, K88) Animal, Kudu (1975) [pXO1+/pXO2+] South Africa, Kruger National Park clusterIII CS,H,K,P,TH,AFLP2 AFS013880 B.cereus AFS013880 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH BGSC4BL1 B.thuringiensis muju BGSC4BL1 Argentina clusterIII CS,H,K,P,TH AFS032151 B.cereus AFS032151 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH M2E15 B.mycoides M2E 15 Food, Potato (2014) Netherlands clusterVI CS,H,K,P,TH C3-5-14 B.cereus C3-5-14 Animal, camel faeces/stools (2015) United Arab Emirates clusterIII CS,H,K,P,TH AFS020602 B.thuringiensis AFS020602 Soil (2014) USA, New York clusterIV CS,H,K,P,TH AFS067617 B.cereus AFS067617 Plant, Soybean core (2014) USA, Iowa conflicting CS,H,K,P,TH AFS032210 B.pseudomycoides AFS032210 Plant, Weed leaf (2014) USA, Ohio conflicting CS,H,K,P,TH ICIS-279 B.paranthracis ICIS-279 Human (2006) Russia, Orenburg clusterIII CS,H,K,P,TH AFS022064 B.thuringiensis AFS022064 Plant, Corn root (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS012518 B.cereus AFS012518 Plant, Weed core (2014) USA, North Carolina clusterIII CS,H,K,P,TH BGSC4H2 B.thuringiensis canadensis P1 EM4 (BGSC4H2, T05a001, AH252, KB003) (1968) Canada conflicting CS,H,K,P,TH AFS030860 B.cereus AFS030860 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS051030 B.cereus AFS051030 (2014) USA, Iowa clusterIV CS,H,K,P,TH FSLE2-0214 B.mycoides FSL E2-0214 Food, finished RTE dairy food product (2014) USA clusterVI CS,H,K,P,TH DE0280 B.thuringiensis DE0280 clusterIV CS,H,K,P,TH AFS057596 B.cereus AFS057596 Plant, Weed core (2014) USA, North Carolina conflicting CS,H,K,P,TH AFS061148 B.cereus AFS061148 Plant, Weed core (2014) USA, North Carolina clusterIV CS,H,K,P,TH BAG1X1-3 B.c_group BAG1X1-3 Soil USA, Massachusetts, Boston clusterVI CS,H,K,P,TH ADRIAI21 B.weihenstephanensis ADRIA I21 (INRA I21) (1991) France clusterVI CS,H,K,P,TH,AFLP3 MB.8-1 B.cereus MB.8-1 Food (2014) Germany, Munich clusterIII CS,H,K,P,TH A42 B.cereus A42 Plant, black pepper plant root (2018) Vietnam clusterIV CS,H,K,P,TH AFS004701 B.cereus AFS004701 Plant, Corn core (2014) USA, North Carolina conflicting CS,H,K,P,TH NZAS01 B.cereus NZAS01 Food, egg white (2015) New Zealand, Dunedin clusterIII CS,H,K,P,TH AFS027629 B.toyonensis AFS027629 Plant, Soybean core (2014) USA, Iowa clusterV CS,H,K,P,TH MW B.thuringiensis MW Other, freshwater stream (2019) USA, New Hampshire, Mont Vernon clusterIV CS,H,K,P,TH AFS021040 B.cereus AFS021040 Plant, core (2014) USA, North Carolina clusterIII CS,H,K,P,TH AFS047495 B.thuringiensis AFS047495 Plant, Corn (2014) USA, Iowa clusterIV CS,H,K,P,TH FORC005 B.cereus FORC 005 Food, chicken cutlett (2014) South Korea, Inchon clusterIV CS,H,K,P,TH A142 B.anthracis A142 Soil (2007) Germany, Neumuenster clusterIII CS,H,K,P,TH AFS041525 B.thuringiensis AFS041525 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS077647 B.cereus AFS077647 Plant, Soybean root (2014) USA, Missouri conflicting CS,H,K,P,TH DE0269 B.cereus DE0269 clusterIV CS,H,K,P,TH AFS003410 B.cereus AFS003410 Plant, Corn core (2014) USA, Illinois clusterIV CS,H,K,P,TH AFS087824 B.cereus AFS087824 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS018409 B.thuringiensis AFS018409 Plant, Oats (2014) USA, North Carolina conflicting CS,H,K,P,TH DE0595 B.cereus DE0595 clusterIII CS,H,K,P,TH AFS027725 B.anthracis AFS027725 Plant, core (2014) USA, North Carolina clusterIII CS,H,K,P,TH AFS045844 B.wiedmannii AFS045844 Plant, core (2014) USA, North Carolina clusterII CS,H,K,P,TH AFS043555 B.thuringiensis AFS043555 Soil (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS081271 B.anthracis AFS081271 Plant, Soybean leaf (2014) USA, Minnesota conflicting CS,H,K,P,TH AFS042307 B.cereus AFS042307 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS056280 B.thuringiensis AFS056280 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH Tyrol4675 B.anthracis Tyrol 4675 Animal, cattle (Cow) (1988) Austria, Tyrol clusterIII CS,H,K,P,TH AFS026439 B.cereus AFS026439 Plant, Soybean root (2014) USA, Missouri conflicting CS,H,K,P,TH AFS039146 B.cereus AFS039146 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH ATCC10792#3 B.thuringiensis thuringiensis type strain ATCC10792 (IMSNU12088, DSM2046, WS2734, AH1083, HD735, CIP53.137, KCTC3452, KCTC1034, BGSC4A11, ATCC10792#3) Animal, Insect, Mediterranean flour moth/mill moth (Ephestia kuhniella/Anagasta kuehniella) [three complete genomes sequenced for this strain with different sequences and origins; strain sequenced by Biological Defense Research Directorate (BDRD), Rockville, Maryland, USA; sequences conflicting with isolates ATCC10792#1 and ATCC10792#2] Israel clusterIV CS,H,K,P,TH PR1 B.paranthracis PR1 Plant, Tobacco rhizosphere soil (2011) China, Hunan Province clusterIII CS,H,K,P,TH AFS028441 B.cereus AFS028441 Plant, Corn core (2014) USA, Illinois conflicting CS,H,K,P,TH AFS009443 B.cereus AFS009443 Plant, Corn core (2014) USA, Illinois clusterIV CS,H,K,P,TH BR58 B.thuringiensis BR58 Plant, stored grain (2000) Brazil, Londrina clusterIV CS,H,K,P,TH AFS005864 B.wiedmannii AFS005864 Plant, Corn (2014) USA, Minnesota clusterII CS,H,K,P,TH MB.16 B.cereus MB.16 Food (2014) Germany, Munich clusterIII CS,H,K,P,TH MOD1Bc98 B.cereus MOD1 Bc98 Other, Oxytetracycline Medicated Fish Feed (2006) USA, Maryland clusterIII CS,H,K,P,TH BF1 B.anthracis BF1 Animal, cattle (cow) carcass (2009) [from a cow that had succumbed to anthrax; pXO1+/pXO2+] Germany, Bavaria clusterIII CS,H,K,P,TH DE0088 B.paranthracis DE0088 clusterIII CS,H,K,P,TH AFS077084 B.cereus AFS077084 Soil (2014) USA, New York clusterIV CS,H,K,P,TH FORC013 B.cereus FORC 013 Food, fried eel (2013) South Korea clusterIV CS,H,K,P,TH BC-AK B.cereus BC-AK Animal, kangaroo (2016) China, Guangxi clusterIII CS,H,K,P,TH SJ-S27 B.cereus SJ-S27 Human USA, Tennessee, Memphis conflicting CS,H,K,P,TH AFS063736 B.thuringiensis AFS063736 Plant, Soybean root (2014) USA, Iowa clusterIV CS,H,K,P,TH EGD-AQ9 B.cereus EGD-AQ9 Other, sewage (2016) India, Maharashtra, Nagpur clusterIII CS,H,K,P,TH DE0365 B.thuringiensis DE0365 clusterIV CS,H,K,P,TH MS17 B.mycoides MS17 Food, Mixed salad (2015) Germany, Kiel clusterVI CS,H,K,P,TH AFS092470 B.pseudomycoides AFS092470 Plant, Soybean core (2014) USA, Iowa conflicting CS,H,K,P,TH AFS098506 B.thuringiensis AFS098506 Plant, Corn root (2014) USA, Iowa clusterIV CS,H,K,P,TH 2000032968 B.anthracis 2000032968 clusterIII CS,H,K,P,TH DE0016 B.tropicus DE0016 clusterIII CS,H,K,P,TH AFS051626 B.cereus AFS051626 Plant, Weed leaf (2014) USA, Indiana clusterIV CS,H,K,P,TH AFS031814 B.thuringiensis AFS031814 Soil (2014) USA, New York clusterIV CS,H,K,P,TH Ba-8776/92-Geo B.anthracis Ba-8776/92-Geo Human, Patient ulcer (1992) Georgia clusterIII CS,H,K,P,TH AFS058833 B.cereus AFS058833 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS028766 B.pseudomycoides AFS028766 Plant, Corn plant (2014) USA, North Carolina clusterI CS,H,K,P,TH MOD1Bc93 B.cereus MOD1 Bc93 Food, Ground Black Pepper (2015) USA, Maryland clusterIV CS,H,K,P,TH AFS033276 B.cereus AFS033276 Plant, tree leaf (2014) USA, North Carolina clusterIV CS,H,K,P,TH BDRD-Cer4 B.cereus BDRD-Cer4 [Biological Defense Research Directorate (BDRD)] USA, Maryland, Rockville clusterIV CS,H,K,P,TH GOE5#2 B.weihenstephanensis GOE5#2 Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014) Germany, Goettingen clusterVI CS,H,K,P,TH AFS087171 B.thuringiensis AFS087171 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH HD977 B.thuringiensis yunnanensis HD977 (BGSC4AM1, T20001) Animal, Insect, Oriental Leafworm Moth/Cluster caterpillar/Cotton leafworm/Tobacco cutworm/Tobacco caterpillar/Tropical armyworm (Spodoptera litura/Prodenia litura) China clusterIV CS,H,K,P,TH,AFLP2,AFLP3 Pasteur B.anthracis Pasteur Animal, cat [pXO1-/pXO2+] clusterIII CS,H,K,P,TH AFS072674 B.toyonensis AFS072674 Plant, Soybean leaf (2014) USA, Iowa clusterV CS,H,K,P,TH Buibui B.thuringiensis japonensis Buibui Animal, Insect, Coleoptera (2013) UK clusterIV CS,H,K,P,TH AFS028664 B.cereus AFS028664 Soil (2014) USA, New York clusterII CS,H,K,P,TH CH39 B.cytotoxicus CH 39 Food, Mashed potatoes (2014) Switzerland clusterVII CS,H,K,P,TH AFS043018 B.mycoides AFS043018 Soil (2014) USA, North Carolina clusterI CS,H,K,P,TH MOD1Bc55 B.cereus MOD1 Bc55 Plant, Sesame Seed (2015) USA, Maryland clusterIII CS,H,K,P,TH AFS043402 B.thuringiensis AFS043402 Plant, Corn core (2014) USA, Illinois clusterIV CS,H,K,P,TH 500 B.anthracis BA500 clusterIII CS,H,K,P,TH AFS064408 B.wiedmannii AFS064408 Other, excrement (2014) USA, Iowa clusterII CS,H,K,P,TH AFS088507 B.thuringiensis AFS088507 Soil (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS054329 B.toyonensis AFS054329 Plant, Corn leaf (2014) USA, Illinois clusterV CS,H,K,P,TH AFS039717 B.cereus AFS039717 Plant, core (2014) USA, North Carolina clusterII CS,H,K,P,TH JRS1 B.cereus JRS1 conflicting CS,H,K,P,TH AFS052781 B.pseudomycoides AFS052781 Plant, Corn core (2014) USA, Illinois conflicting CS,H,K,P,TH P482 B.anthracis BAP482 clusterIII CS,H,K,P,TH AFS057097 B.cereus AFS057097 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH RC-1 B.pacificus RC-1 Soil, mine soil (2010) China, Guangdong Province clusterIII CS,H,K,P,TH 7/27/S B.cereus 7/27/S Human, faeces/stools [human diarrhea] clusterIII CS,H,K,P,TH AFS099505 B.thuringiensis AFS099505 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS040987 B.thuringiensis AFS040987 Plant, Soybean root (2014) USA, Minnesota clusterIV CS,H,K,P,TH HuB1-1 B.c_group HuB1-1 Soil Belgium clusterIV CS,H,K,P,TH rc6 B.thuringiensis rc6 Food, Black rice root (2015) India, Imphal west district conflicting CS,H,K,P,TH AFS030095 B.thuringiensis AFS030095 Plant, Soybean root (2014) USA, Minnesota clusterIV CS,H,K,P,TH AFS096476 B.toyonensis AFS096476 Plant, Soybean root (2013) USA, Illinois clusterV CS,H,K,P,TH AFS025490 B.cereus AFS025490 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH DE0320 B.thuringiensis DE0320 clusterIV CS,H,K,P,TH AFS062118 B.anthracis AFS062118 Plant, Corn core (2014) USA, North Carolina clusterIII CS,H,K,P,TH deltaSterne B.anthracis delta Sterne [pXO1-/pXO2-] clusterIII CS,H,K,P,TH AFS073305 B.cereus AFS073305 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH 3a B.cereus 3a (FRI41) [Food Research Institute, University of Wisconsin-Madison] USA, Wisconsin, Madison clusterIII CS,H,K,P,TH,AFLP2 AFS011531 B.cereus AFS011531 Plant, Corn plant (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS090208 B.pseudomycoides AFS090208 Plant, Corn grain bin dust (2013) USA, Iowa clusterI CS,H,K,P,TH WestNA B.anthracis Western North America USA6153 (A0071) Animal, Bison [pXO1+/pXO2+] Canada clusterIII CS,H,K,P,TH AFS097327 B.cereus AFS097327 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS070970 B.wiedmannii AFS070970 Plant, tree leaf (2014) USA, North Carolina clusterII CS,H,K,P,TH Vollum1B B.anthracis Vollum 1B Human (1951) [weaponized Vollum substrain used in American warheads during the 1960-s; pXO1+/pXO2+] USA clusterIII CS,H,K,P,TH AFS040438 B.thuringiensis AFS040438 Plant, Corn core (2014) USA, Illinois clusterIV CS,H,K,P,TH AFS009734 B.cereus AFS009734 Plant, Weed core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS007907 B.cereus AFS007907 Plant, core (2014) USA, North Carolina clusterVI CS,H,K,P,TH AFS086892 B.cereus AFS086892 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS063894 B.thuringiensis AFS063894 Food, Mushroom (2013) USA, Iowa clusterIV CS,H,K,P,TH TN10 B.cereus TN10 Other, Environment (2016) Bangladesh, Dhaka clusterIV CS,H,K,P,TH AFS066483 B.thuringiensis AFS066483 Plant, Corn leaf (2014) USA, Illinois clusterIV CS,H,K,P,TH AFS095482 B.thuringiensis AFS095482 Other, excrement (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS022412 B.cereus AFS022412 Plant, core (2014) USA, North Carolina clusterII CS,H,K,P,TH AFS056597 B.thuringiensis AFS056597 Soil (2014) USA, North Carolina clusterIV CS,H,K,P,TH ATCC10206 B.mycoides Flugge 10206 (ATCC10206, NCIMB8096, NCTC2603, CIP105443, NRS936) clusterI CS,H,K,P,TH,AFLP3 SDAGO95 B.weihenstephanensis SDA GO95 (1997) Sweden clusterVI CS,H,K,P,TH,AFLP3 AFS010752 B.toyonensis AFS010752 Plant, core (2014) USA, North Carolina clusterV CS,H,K,P,TH AFS048765 B.thuringiensis AFS048765 Plant, Soybean root (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS089520 B.wiedmannii AFS089520 Plant, Corn core (2014) USA, Illinois clusterII CS,H,K,P,TH AFS053994 B.thuringiensis AFS053994 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS074688 B.pseudomycoides AFS074688 Plant, Soybean leaf (2014) USA, Iowa conflicting CS,H,K,P,TH BGSC4BP1 B.thuringiensis kim BGSC4BP1 Soil, sesame field South Korea clusterIV CS,H,K,P,TH UR-1 B.anthracis UR-1 Human, blood (2012) [from a german heroin user; fatal case of injectional anthrax; pXO1+/pXO2+] Germany, Bavaria clusterIII CS,H,K,P,TH AFS078211 B.cereus AFS078211 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS049840 B.cereus AFS049840 Plant, Wheat plant (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS019647 B.cereus AFS019647 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS027250 B.thuringiensis AFS027250 Plant, Corn leaf (2014) USA, Illinois clusterIV CS,H,K,P,TH AFS085674 B.cereus AFS085674 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH 81/1 B.anthracis 81/1 Human, blood (1979) Russia clusterIII CS,H,K,P,TH ATCC10987#2 B.cereus ATCC10987#2 (ATCC10987) Dairy products, Cheese (1930) [strain named ATCC10987 but sequences conflicting with isolate ATCC10987#1 and different origin] Pakistan, Ravi River clusterIII CS,H,K,P,TH AFS063640 B.thuringiensis AFS063640 Plant, Corn core (2014) USA, Illinois clusterIV CS,H,K,P,TH VD184 B.cereus VD184 clusterIV CS,H,K,P,TH AFS075781 B.cereus AFS075781 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS082731 B.toyonensis AFS082731 Plant, Weed plant (2014) USA, Indiana clusterV CS,H,K,P,TH AND1407 B.c_group AND1407 Food clusterIII CS,H,K,P,TH MOD1Bc204 B.cereus MOD1 Bc204 Human, Baby Wipes (2016) USA, Maryland clusterIII CS,H,K,P,TH SVA11 B.anthracis SVA11 Animal, cattle (2011) [from an outbreak in cattle that occurred in a Swedish nature reserve; pXO1+/pXO2+] Sweden clusterIII CS,H,K,P,TH AFS054563 B.wiedmannii AFS054563 Plant, Corn leaf (2014) USA, Illinois clusterII CS,H,K,P,TH AFS030229 B.cereus AFS030229 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH HD682 B.thuringiensis finitimus HD682 Japan clusterIII CS,H,K,P,TH,AFLP2 VD156 B.c_group VD156 Soil UAE, Abu Dhabi clusterIV CS,H,K,P,TH AFS059559 B.thuringiensis AFS059559 Soil (2014) USA, North Carolina clusterIV CS,H,K,P,TH DB27 B.thuringiensis DB27 [highly nematicidal] clusterIV CS,H,K,P,TH AFS068308 B.cereus AFS068308 Plant, tree leaf (2014) USA, North Carolina conflicting CS,H,K,P,TH AFS066175 B.thuringiensis AFS066175 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS080281 B.cereus AFS080281 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS023418 B.thuringiensis AFS023418 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS009093 B.cereus AFS009093 Plant, Corn core (2014) USA, North Carolina conflicting CS,H,K,P,TH MOD1Bc180 B.cereus MOD1 Bc180 Human, Baby Wipes (2016) USA, Maryland clusterIII CS,H,K,P,TH AFS050653 B.cereus AFS050653 Plant, Soybean core (2014) USA, Iowa conflicting CS,H,K,P,TH AFS009013 B.pseudomycoides AFS009013 Plant, Corn leaf (2014) USA, Illinois clusterI CS,H,K,P,TH AFS058113 B.thuringiensis AFS058113 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH 2000032879 B.anthracis 2000032879 (1962) clusterIII CS,H,K,P,TH KCCM40260 B.mycoides ATCC21929 (KCCM40260) Soil New Guinea conflicting K,P AFS081620 B.thuringiensis AFS081620 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH FSLR5-0811 B.cereus FSL R5-0811 Dairy products, pasteurized milk (2006) USA conflicting CS,H,K,P,TH AFS096050 B.anthracis AFS096050 Plant, Corn (2014) USA, North Carolina clusterIII CS,H,K,P,TH SK57 B.anthracis SK57 Human (1975) UK clusterIII CS,H,K,P,TH AFS052400 B.cereus AFS052400 Plant, Corn core (2014) USA, Illinois clusterIV CS,H,K,P,TH SJ-S22 B.cereus SJ-S22 clusterIV CS,H,K,P,TH 219298 B.mycoides 219298 (BA0098) clusterI CS,H,K,P,TH OM04-20 B.cereus OM04-20 Human, faeces/stools (2013) China, Shenzhen conflicting CS,H,K,P,TH AFS024089 B.cereus AFS024089 Plant, core (2014) USA, North Carolina clusterVI CS,H,K,P,TH AFS072125 B.toyonensis AFS072125 Plant, Soybean leaf (2014) USA, Iowa clusterV CS,H,K,P,TH AFS070889 B.cereus AFS070889 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS048213 B.cereus AFS048213 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH BGSC4V1 B.thuringiensis tohokuensis BGSC4V1 Animal, Insect, silkworm (Bombyx mori) (1981) Japan clusterIV CS,H,K,P,TH AFS045441 B.cereus AFS045441 (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS037265 B.pseudomycoides AFS037265 Plant, Soybean leaf (2014) USA, Missouri conflicting CS,H,K,P,TH AFS099621 B.cereus AFS099621 Plant, Corn core (2014) USA, North Carolina conflicting CS,H,K,P,TH GOE4#1 B.thuringiensis GOE4#1 Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014) Germany, Goettingen clusterIV CS,H,K,P,TH AFS094802 B.toyonensis AFS094802 Plant, Soybean core (2014) USA, Iowa clusterV CS,H,K,P,TH I149 B.cereus I149 Plant, Grass (2017) Israel, Karie Deshe clusterIV CS,H,K,P,TH AFS007234 B.cereus AFS007234 Plant, Soybean core (2014) USA, Iowa conflicting CS,H,K,P,TH AFS044782 B.toyonensis AFS044782 Plant, Soybean leaf (2014) USA, Iowa clusterV CS,H,K,P,TH T68001 B.thuringiensis thailandensis T68001 Thailand clusterIII CS,H,K,P,TH,AFLP3 AFS044250 B.toyonensis AFS044250 Soil (2013) USA, North Carolina clusterV CS,H,K,P,TH SPV842_15 B.anthracis SPV842_15 Animal, cattle (bovine) (Bos taurus) liver [from bovine aborted fetus] (2015) Brazil clusterIII CS,H,K,P,TH 105Ne B.cereus 105Ne Other, Water (2011) Switzerland, Neuchatel, Ponts-de-Martel clusterV CS,H,K,P,TH BAG1X2-3 B.c_group BAG1X2-3 Soil USA, Massachusetts, Boston conflicting CS,H,K,P,TH IMSNU13046 B.cereus IMSNU13046 (ATCC21772) Animal, chicken and turkey manure clusterIII K I1 B.cereus I1 Soil, Coriander (Coriandrum sativum) undisturbed soil (2016) Israel, Ramat HaNadiv conflicting CS,H,K,P,TH AFS055282 B.thuringiensis AFS055282 Plant, Corn leaf (2014) USA, Iowa clusterIV CS,H,K,P,TH SJ-S20 B.cereus SJ-S20 Human USA, Tennessee, Memphis clusterIII CS,H,K,P,TH AFS051073 B.toyonensis AFS051073 Plant, Corn core (2014) USA, North Carolina clusterV CS,H,K,P,TH MOD1Bc112 B.cereus MOD1 Bc112 Other, Powdered Infant Formula (2015) USA, Maryland clusterIII CS,H,K,P,TH NRRLB-18679 B.thuringiensis sotto NRRLB-18679 Animal, Insect, Coleoptera (2013) UK clusterII CS,H,K,P,TH MOD1Bc23 B.cereus MOD1 Bc23 Food, Black Pepper Powder (2015) USA, Maryland clusterIV CS,H,K,P,TH IMSNU12079 B.cereus IMSNU12079 (KCTC1092, ATCC10876) Other, contaminated flask [data from Ko et al. 2004, Infect. Immunity 72, 5253-5261; sequences conflicting with isolate ATCC10876] clusterIV K BGSC4AT1 B.thuringiensis japonensis BGSC4AT1 (1986) Japan clusterIV CS,H,K,P,TH AFS000724 B.cereus AFS000724 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH WSBC10311 B.c_group WSBC10311 (KB011) [B.cereus or B.weihenstephanensis] Germany, Weihenstephan clusterII CS,H,K,P,TH,AFLP3 ANSES86 B.anthracis ANSES86 clusterIII CS,H,K,P,TH ATCC14579#2 B.cereus type strain ATCC14579 (AH923, BGSC6A5, KB001, KCTC3624, NCTC2599, ATCC14579#2) Other, Farm, cow-shed air (1916) [strain sequenced by Key Laboratory of Microbial Technology and Bioinformatics of Zhejiang Province, Hangzhou, China; MLST data conflicting with isolate ATCC14579#1; three complete genomes sequenced for this strain: identical MLST sequences between isolates ATCC14579#2 and ATCC14579#3 and different sequences in isolate ATCC14579#1] clusterIV CS,H,K,P,TH AFS045990 B.toyonensis AFS045990 Plant, Corn (2014) USA, Iowa clusterV CS,H,K,P,TH AFS075082 B.thuringiensis AFS075082 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH BR37 B.thuringiensis BR37 Plant, stored grains (2009) [two complete genomes sequenced for this strain with identical MLST sequences] Brazil, Sertanopolis clusterIV CS,H,K,P,TH AFS076596 B.cereus AFS076596 Soil (2014) USA, New York conflicting CS,H,K,P,TH HD542 B.thuringiensis thompsoni HD542 (BGSC4O1, AH454, T12001, DD960) Animal, insect USA clusterIV CS,H,K,P,TH,AFLP2,AFLP3 CH15 B.cytotoxicus CH 15 Food, Mashed potatoes (2015) Switzerland clusterVII CS,H,K,P,TH AFS040794 B.anthracis AFS040794 Plant, core (2014) USA, North Carolina clusterIII CS,H,K,P,TH BGSC4AN1 B.thuringiensis shanongiensis HD1012 (AH462, BGSC4AN1, T2, T22001, DSM6075) Soil (1986) China clusterV CS,H,K,P,TH,AFLP2,AFLP3 Kafkas-149 B.anthracis Kafkas-149 Soil (2012) Turkey, Selim clusterIII CS,H,K,P,TH AFS052525 B.cereus AFS052525 Plant, Corn core (2014) USA, North Carolina conflicting CS,H,K,P,TH AFS035044 B.cereus AFS035044 Plant, core (2014) USA, North Carolina conflicting CS,H,K,P,TH AFS014136 B.cereus AFS014136 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS048014 B.thuringiensis AFS048014 Plant, Soybean leaf (2014) USA, Iowa clusterIV CS,H,K,P,TH IS075 B.c_group IS075 Animal, Mammals Poland clusterIII CS,H,K,P,TH AFS075437 B.wiedmannii AFS075437 Other, excrement (2014) USA, Iowa clusterII CS,H,K,P,TH Bt-ICA/UNMSM10RA B.thuringiensis ICA/UNMSM10RA (Bt-ICA/UNMSM10RA) (2010) Peru, Huaral conflicting CS,H,K,P,TH AFS073128 B.toyonensis AFS073128 Plant, Corn grain bin dust (2013) USA, Iowa clusterV CS,H,K,P,TH T70001 B.thuringiensis sinensis T70001 clusterII CS,H,K,P,TH,AFLP3 AFS093598 B.cereus AFS093598 Plant, tree leaf (2014) USA, North Carolina clusterIII CS,H,K,P,TH AFS085003 B.toyonensis AFS085003 Plant, Corn grain bin dust (2013) USA, Iowa clusterV CS,H,K,P,TH NC7401 B.cereus NC7401 Human, faeces/stools or vomit (1974 or 1994) [human vomiting, emetic food poisoning outbreak, emetic toxin/cereulide producer] Japan clusterIII CS,H,K,P,TH,AFLP3 AFS098564 B.pseudomycoides AFS098564 Soil (2014) USA, Iowa clusterI CS,H,K,P,TH BAG1O-1 B.c_group BAG1O-1 Soil USA, Massachusetts, Boston clusterVI CS,H,K,P,TH AFS013685 B.cereus AFS013685 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH MOD1Bc194 B.cereus MOD1 Bc194 Human, Baby Wipes (2016) USA, Maryland clusterIII CS,H,K,P,TH ATCC14579#3 B.cereus type strain ATCC14579 (AH923, BGSC6A5, KB001, KCTC3624, NCTC2599, ATCC14579#3) [Farm, cow-shed air (1916) [strain sequenced by WTSI, Pathogen Informatics, Wellcome Trust Sanger Institute, UK; MLST data conflicting with isolate ATCC14579#1; three complete genomes sequenced for this strain: identical MLST sequences between isolates ATCC14579#2 and ATCC14579#3 and different sequences in isolate ATCC14579#1]] clusterIV CS,H,K,P,TH Schrouff B.c_group Schrouff Food clusterIV CS,H,K,P,TH MOD1Bc65 B.cereus MOD1 Bc65 Human, Baby Wipes (2016) USA, Maryland clusterIII CS,H,K,P,TH AFS095574 B.anthracis AFS095574 Plant, root (2014) USA, North Carolina conflicting CS,H,K,P,TH HuA4-10 B.c_group HuA4-10 Soil Belgium clusterVI CS,H,K,P,TH AFS006579 B.toyonensis AFS006579 Soil (2014) USA, New York clusterV CS,H,K,P,TH BHP B.mycoides BHP Soil Papua New Guinea unclustered CS,H,K,P,TH AFS014678 B.cereus AFS014678 Soil (2014) USA, New York clusterII CS,H,K,P,TH AFS002530 B.cereus AFS002530 Plant, Weed leaf (2014) USA, Ohio clusterIV CS,H,K,P,TH GM6LP B.mycoides GM6LP Plant, English ray-grass (Lolium perenne) Germany clusterVI CS,H,K,P,TH AFS069829 B.pseudomycoides AFS069829 Plant, Corn core (2014) USA, Illinois conflicting CS,H,K,P,TH AFS004356 B.thuringiensis AFS004356 Plant, Corn root (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS076905 B.cereus AFS076905 Soil (2014) USA, New York conflicting CS,H,K,P,TH AFS002094 B.cereus AFS002094 Plant, Corn plant (2014) USA, North Carolina clusterIV CS,H,K,P,TH Ba-1802/12-Geo B.anthracis Ba-1802/12-Geo Human, Patient ulcer (2012) Georgia clusterIII CS,H,K,P,TH VD133 B.c_group VD133 Soil Martinique clusterIV CS,H,K,P,TH AFS017947 B.cereus AFS017947 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS026537 B.cereus AFS026537 Plant, Weed core (2014) USA, North Carolina conflicting CS,H,K,P,TH DE0031 B.thuringiensis DE0031 clusterIV CS,H,K,P,TH AFS042632 B.cereus AFS042632 Plant, Corn core (2014) USA, Illinois clusterVI CS,H,K,P,TH 95014 B.anthracis 95014 [pXO1+/pXO2-] clusterIII CS,H,K,P,TH CH4 B.cytotoxicus CH 4 Food, Mashed potatoes (2015) Switzerland clusterVII CS,H,K,P,TH IMSNU12098 B.thuringiensis finitimus IMSNU12098 (KCTC1516) clusterIII K AFS068624 B.anthracis AFS068624 Plant, core (2014) USA, North Carolina clusterIII CS,H,K,P,TH AFS001911 B.wiedmannii AFS001911 Plant, core (2014) USA, North Carolina clusterII CS,H,K,P,TH KCTC1094 B.cereus KCTC1094 (IMSNU13044) Soil Japan clusterIV K,P A31 B.cereus A31 Plant, black pepper plant root (2018) Vietnam clusterIV CS,H,K,P,TH AFS020128 B.thuringiensis AFS020128 Plant, Soybean root (2013) USA, Minnesota clusterIV CS,H,K,P,TH G03 B.thuringiensis G03 Soil (2003) China, Hebei, Baoding clusterIV CS,H,K,P,TH AFS069374 B.pseudomycoides AFS069374 Soil (2014) USA, North Carolina conflicting CS,H,K,P,TH AFS091573 B.cereus AFS091573 Soil (2014) USA, New York clusterVI CS,H,K,P,TH AFS039661 B.cereus AFS039661 Soil (2014) USA, New York conflicting CS,H,K,P,TH Sterne34F2 B.anthracis Sterne 34F2 (ASC245) Animal, cattle (cow) (1937) [Animal vaccine strain; pXO1+/pXO2-; two complete genomes sequenced for this strain with identical MLST sequences] South Africa clusterIII CS,H,K,P,TH AFS025007 B.anthracis AFS025007 Plant, Corn core (2014) USA, North Carolina clusterIII CS,H,K,P,TH MOD1Bc62 B.cereus MOD1 Bc62 Human, Baby Wipes (2016) USA, Maryland clusterIII CS,H,K,P,TH IMSNU11012 B.cereus IMSNU11012 (NCIB9207) clusterIV K AFS086947 B.cereus AFS086947 Plant, Corn core (2014) USA, Illinois clusterVI CS,H,K,P,TH AFS070572 B.wiedmannii AFS070572 Plant, Soybean root (2014) USA, Iowa clusterII CS,H,K,P,TH BGSC4AD1 B.thuringiensis toguchini T31001 (BGSC4AD1) Soil USSR, Russia clusterIV CS,H,K,P,TH AFS057443 B.toyonensis AFS057443 Plant, Soybean core (2014) USA, Iowa clusterV CS,H,K,P,TH AFS090431 B.cereus AFS090431 Plant, Oats plant (2014) USA, North Carolina clusterIV CS,H,K,P,TH DE0362 B.mycoides DE0362 clusterVI CS,H,K,P,TH 2000031008 B.anthracis 2000031008 USA, Alabama clusterIII CS,H,K,P,TH AFS058160 B.toyonensis AFS058160 Plant, Soybean core (2014) USA, Iowa clusterV CS,H,K,P,TH 14RA5914 B.anthracis 14RA5914 Animal, cattle (bovine) (Bos primigenius taurus) spleen (2014) Germany, Dobichau clusterIII CS,H,K,P,TH AFS065825 B.thuringiensis AFS065825 Plant, Soybean root (2014) USA, Minnesota clusterIV CS,H,K,P,TH AFS053345 B.wiedmannii AFS053345 Plant, Soybean core (2014) USA, Iowa clusterII CS,H,K,P,TH CCTCCM2014513 B.cereus CCTCC M2014513 Other, tannery wastewater active sludge (2010) China, Sichuan Province clusterIV CS,H,K,P,TH AFS060037 B.pseudomycoides AFS060037 Soil (2014) USA, New York conflicting CS,H,K,P,TH AFS024629 B.cereus AFS024629 Soil (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS095989 B.thuringiensis AFS095989 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS099364 B.toyonensis AFS099364 Plant, Corn core (2014) USA, Illinois clusterV CS,H,K,P,TH h16 B.thuringiensis indiana or dakota h16 clusterIV CS,H,K,P,TH AFS016553 B.toyonensis AFS016553 Plant, Weed plant (2014) USA, Indiana clusterV CS,H,K,P,TH GBAC46 B.thuringiensis GBAC46 Plant, grass roots (2005) China, Tibet, Nyingchi clusterIV CS,H,K,P,TH IMSNU12077 B.cereus IMSNU12077 (ATCC21366) Soil clusterIII K AFS015939 B.cereus AFS015939 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH INRASLp B.weihenstephanensis INRA SL- (INRA SLp) clusterVI CS,H,K,P,TH,AFLP3 17OD930 B.anthracis 17OD930 Animal, cattle (bovine) (Bos taurus) placenta (2017) Switzerland, Kanton of Jura clusterIII CS,H,K,P,TH BAG5O-1 B.c_group BAG5O-1 Soil USA, Massachusetts, Boston clusterV CS,H,K,P,TH AFS096463 B.thuringiensis AFS096463 Food, Mushroom (2013) USA, Iowa clusterIV CS,H,K,P,TH HZBCE-07 B.cereus HZBCE-07 Food, Fried fish (2015) China, Hangzhou clusterIII CS,H,K,P,TH CDC684 B.anthracis CDC684 (NRRL3495, NRS234) [originally labeled B.megaterium; shows significant attenuation of virulence; pXO1+/pXO2+] clusterIII CS,H,K,P,TH PG9 B.albus PG 9 Other, phosphogypsum piles (2018) Tunisia, Gafsa clusterII CS,H,K,P,TH GBSC45 B.wiedmannii GBSC45 Soil (2005) China, Tibet clusterII CS,H,K,P,TH AFS045893 B.wiedmannii AFS045893 Soil (2014) USA, North Carolina clusterII CS,H,K,P,TH T01328 B.thuringiensis T01328 Soil (1994) Brazil, Sao Paulo, Cubatao county clusterIV CS,H,K,P,TH AFS060293 B.toyonensis AFS060293 Other, excrement (2014) USA, Iowa clusterV CS,H,K,P,TH AFS071894 B.cereus AFS071894 Plant, core (2014) USA, North Carolina clusterVI CS,H,K,P,TH AFS078926 B.wiedmannii AFS078926 Plant, Soybean core (2014) USA, Iowa clusterII CS,H,K,P,TH 2000032989 B.anthracis 2000032989 clusterIII CS,H,K,P,TH AFS060154 B.cereus AFS060154 Plant, Soybean leaf (2014) USA, Iowa conflicting CS,H,K,P,TH IMSNU10013 B.cereus IMSNU10013 Soil Korea clusterIV K AFS037117 B.pseudomycoides AFS037117 Soil (2014) USA, Iowa clusterI CS,H,K,P,TH AFS096926 B.cereus AFS096926 Plant, core (2014) USA, North Carolina clusterVI CS,H,K,P,TH PFYN01#1 B.albus PFYN01#1 Other, Silt in the tailings reservoir area (2016) China, Panzhihua clusterII CS,H,K,P,TH AFS071044 B.cereus AFS071044 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS097219 B.cereus AFS097219 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH HD1#1 B.thuringiensis kurstaki HD1 (HD1#1) Soil (1970) [strain sequenced by University of Oklahoma Health Sciences Center, Oklahoma City, Oklahoma, USA; MLST data conflicting with isolates BGSC4D1, ATCC33679, and HD1#2; three complete genomes sequenced for this strain: identical MLST sequences between isolates HD1#1 and HD1#3 and different sequences in isolate HD1#2] USA conflicting CS,H,K,P,TH ET31 B.cereus ET31 Other, Glacier sediment (2010) Svalbard, Revvatnet basin, southern Spitsbergen clusterIV CS,H,K,P,TH AFS055530 B.toyonensis AFS055530 Plant, Corn core (2014) USA, Illinois clusterV CS,H,K,P,TH 44-NIAH B.anthracis 44-NIAH [pXO1+/pXO2+] clusterIII CS,H,K,P,TH AFS018617 B.thuringiensis AFS018617 Soil (2014) USA, New York clusterIV CS,H,K,P,TH AFS043359 B.cereus AFS043359 Plant, core (2014) USA, North Carolina conflicting CS,H,K,P,TH DE0463 B.cereus DE0463 clusterIV CS,H,K,P,TH AFS074724 B.cereus AFS074724 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH MOD1Bc111 B.cereus MOD1 Bc111 Other, Powdered Infant Formula (2015) USA, Maryland clusterIII CS,H,K,P,TH AFS074515 B.cereus AFS074515 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH Bt18247 B.thuringiensis 18247 (Bt18247) Animal, nematode (Caenorhabditis elegans) clusterIV CS,H,K,P,TH DE0143 B.cereus DE0143 conflicting CS,H,K,P,TH AFS003846 B.toyonensis AFS003846 Soil (2014) USA, Iowa clusterV CS,H,K,P,TH AFS020704 B.cereus AFS020704 Plant, Corn core (2014) USA, North Carolina conflicting CS,H,K,P,TH FSLW8-0824 B.cereus FSL W8-0824 Food, Finished RTE food product (2012) USA, New York clusterIV CS,H,K,P,TH AFS038158 B.thuringiensis AFS038158 Plant, Soybean root (2013) USA, Minnesota conflicting CS,H,K,P,TH MOD1Bc58 B.cereus MOD1 Bc58 Human, Baby Wipes (2016) USA, Maryland clusterIII CS,H,K,P,TH Rock1-4 B.mycoides Rock1-4 Soil USA, Maryland, Rockville conflicting CS,H,K,P,TH AFS055421 B.thuringiensis AFS055421 Plant, Corn core (2014) USA, Illinois clusterIV CS,H,K,P,TH BTZ B.pseudomycoides BTZ [originally submitted as B.thuringiensis but later determined to be B.mycoides and then changed to B.pseudomycoides] clusterI CS,H,K,P,TH AFS086955 B.cereus AFS086955 Soil (2014) USA, New York clusterVI CS,H,K,P,TH T07019 B.thuringiensis aizawai T07019 clusterIV CS,H,K,P,TH HD1#3 B.thuringiensis kurstaki HD1 (HD1#3) Animal, Insect larvae (2000) [strain sequenced by Los Alamos National Laboratory, Los Alamos, New Mexico, USA; MLST data conflicting with isolates BGSC4D1, ATCC33679, and HD1#2; three complete genomes sequenced for this strain: identical MLST sequences between isolates HD1#1 and HD1#3 and different sequences in isolate HD1#2] USA conflicting CS,H,K,P,TH AFS007502 B.cereus AFS007502 Soil (2014) USA, New York clusterVI CS,H,K,P,TH B4153 B.cereus B4153 Dairy products, milk, (fermented) dairy products and desserts (2012) Netherlands clusterIII CS,H,K,P,TH AFS024540 B.cereus AFS024540 Soil (2014) USA, Iowa clusterIV CS,H,K,P,TH Han B.anthracis Han Animal, dead cow blood (2013) [from the site of an anthrax outbreak] China, Liaoning Province clusterIII CS,H,K,P,TH AFS014145 B.thuringiensis AFS014145 Plant, Soybean root (2013) USA, Illinois clusterIV CS,H,K,P,TH AFS082247 B.thuringiensis AFS082247 Plant, Corn leaf (2014) USA, Illinois clusterIV CS,H,K,P,TH NMTD81 B.thuringiensis NMTD81 Soil (2005) China, Tibet clusterIV CS,H,K,P,TH 62 B.thuringiensis japonensis 62 Animal, Insect, Coleoptera (2013) UK clusterIV CS,H,K,P,TH AFS077478 B.wiedmannii AFS077478 Plant, Soybean leaf (2014) USA, Minnesota clusterII CS,H,K,P,TH F4429/71 B.cereus F4429/71 Food, vanilla pudding (1971) [diarrheal food poisoning outbreak] Netherlands clusterIII CS,H,K,P,TH,AFLP2,AFLP3 AFS014939 B.toyonensis AFS014939 Plant, Grass core (2014) USA, Iowa clusterV CS,H,K,P,TH AFS043533 B.cereus AFS043533 Plant, Soybean root (2014) USA, Minnesota conflicting CS,H,K,P,TH AFS042818 B.toyonensis AFS042818 (2014) USA, North Carolina clusterV CS,H,K,P,TH AFS071454 B.thuringiensis AFS071454 Plant, Soybean root (2014) USA, Missouri clusterIV CS,H,K,P,TH AFS039482 B.cereus AFS039482 Soil (2014) USA, New York clusterVI CS,H,K,P,TH AFS021667 B.thuringiensis AFS021667 Plant, Corn core (2014) USA, Illinois clusterIV CS,H,K,P,TH AFS089278 B.toyonensis AFS089278 Plant, core (2014) USA, North Carolina clusterV CS,H,K,P,TH AFS053253 B.thuringiensis AFS053253 Plant, Soybean leaf (2014) USA, Minnesota clusterIV CS,H,K,P,TH AFS018281 B.cereus AFS018281 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH FSLK6-1030 B.cereus FSL K6-1030 Dairy products, condensed milk (2013) USA conflicting CS,H,K,P,TH 2000031075 B.anthracis 2000031075 Animal, cattle South Africa clusterIII CS,H,K,P,TH ATCC11778 B.c_group ATCC11778 (IMSNU11013, AH182, AH1086, 152, DSM4490, NCTC10320, KCTC1012, PCI213) [B.cereus or B.mycoides] USA, New York clusterIV K,P,AFLP1,AFLP2,AFLP3,MLEE FSLW8-0640 B.cereus FSL W8-0640 Dairy products, Skim milk CLT (2012) USA, New York clusterIV CS,H,K,P,TH AFS025510 B.thuringiensis AFS025510 Soil (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS066968 B.cereus AFS066968 Plant, Soybean root (2014) USA, Missouri clusterVI CS,H,K,P,TH AFS057349 B.wiedmannii AFS057349 Plant, core (2014) USA, North Carolina clusterII CS,H,K,P,TH AFS013084 B.wiedmannii AFS013084 Soil (2014) USA, New York clusterII CS,H,K,P,TH PJC48 B.cereus PJC48 Other, activated sludge (2016) China, Shihezi clusterII CS,H,K,P,TH AFS027898 B.cereus AFS027898 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS026918 B.cereus AFS026918 Soil (2014) USA, New York clusterVI CS,H,K,P,TH AFS009314 B.toyonensis AFS009314 Soil (2014) USA, Iowa clusterV CS,H,K,P,TH N31 B.cereus N31 Other, Sediments (2002) China, South China Sea clusterIV CS,H,K,P,TH MOD1Bc223 B.wiedmannii MOD1 Bc223 Food, food product (2016) USA, Maryland clusterII CS,H,K,P,TH DE0338 B.toyonensis DE0338 clusterV CS,H,K,P,TH AFS017361 B.anthracis AFS017361 Plant, core (2014) USA, North Carolina clusterIII CS,H,K,P,TH 721 B.anthracis BA721 clusterIII CS,H,K,P,TH AFS041711 B.cereus AFS041711 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH CZ-2 B.cereus CZ-2 Soil, paddy soil China, Nanjing conflicting CS,H,K,P,TH AFS073631 B.cereus AFS073631 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS058541 B.toyonensis AFS058541 Soil (2014) USA, New York clusterV CS,H,K,P,TH AFS029052 B.cereus AFS029052 Plant, Weed core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS032567 B.cereus AFS032567 Plant, Corn (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS094619 B.wiedmannii AFS094619 Plant, Corn core (2014) USA, North Carolina clusterII CS,H,K,P,TH AFS086407 B.cereus AFS086407 Soil (2014) USA, New York clusterIV CS,H,K,P,TH AFS005011 B.thuringiensis AFS005011 Plant, Weed plant (2014) USA, Indiana clusterIV CS,H,K,P,TH AFS079395 B.cereus AFS079395 Plant, core (2014) USA, North Carolina clusterVI CS,H,K,P,TH HKI4363/88 B.anthracis HKI4363/88 Animal, cattle (bovine) (Bos primigenius taurus) (1988) Finland, Ostrobothnia clusterIII CS,H,K,P,TH A0193 B.anthracis LSU193 (K1256, A0193, 96-10355) Animal, cattle (cow) (1996) [pXO1+/pXO2+] USA, South Dakota clusterIII CS,H,K,P,TH,AFLP2 AFS097488 B.thuringiensis AFS097488 Plant, Corn core (2014) USA, Illinois clusterIV CS,H,K,P,TH ANSES08-8_20 B.anthracis ANSES08-8_20 (08-8_20) Animal, cattle (bovine) (2008) France, Doubs clusterIII CS,H,K,P,TH BGSC4E3 B.thuringiensis sotto BGSC4E3 Animal, Insect, silkworm (Bombyx mori) (2013) UK clusterIV CS,H,K,P,TH NVH0597/99 B.cereus NVH0597-99 (NVH0597/99) Food, spice mix (1999) [strain believed to be the cause of a diarrheal food poisoning outbreak] Norway clusterIII CS,H,K,P,TH,AFLP3 MOD1Bc213 B.cereus MOD1 Bc213 Human, Baby Wipes (2016) USA, Maryland clusterIII CS,H,K,P,TH FSLK6-0043 B.cereus FSL K6-0043 Dairy products, Laboratory Heat Treated Raw Milk (2012) USA, New York clusterIV CS,H,K,P,TH NWUAB01 B.cereus NWUAB01 Soil (2016) South Africa, Vryburg clusterIV CS,H,K,P,TH FORC048 B.cereus FORC 048 Plant, Sesame leaf (2014) South Korea, Gwangju clusterIV CS,H,K,P,TH AFS011149 B.wiedmannii AFS011149 Plant, Soybean leaf (2014) USA, Iowa clusterII CS,H,K,P,TH Ba-8884/94-Geo B.anthracis Ba-8884/94-Geo Human, Patient ulcer (1994) Georgia clusterIII CS,H,K,P,TH GOE11 B.weihenstephanensis GOE11 Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014) Germany, Goettingen clusterVI CS,H,K,P,TH ISP2954 B.c_group ISP2954 Food conflicting CS,H,K,P,TH AFS063157 B.cereus AFS063157 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS081482 B.cereus AFS081482 Plant, Soybean core (2014) USA, Iowa conflicting CS,H,K,P,TH SJ-S7 B.cereus SJ-S7 Human USA, Tennessee, Memphis clusterIII CS,H,K,P,TH SJ-S17 B.cereus SJ-S17 Human USA, Tennessee, Memphis clusterIV CS,H,K,P,TH SB4 B.mycoides SB4 Food (2016) Netherlands conflicting CS,H,K,P,TH B4116 B.cereus B4116 Food (2013) Netherlands clusterIII CS,H,K,P,TH AFS023479 B.cereus AFS023479 Plant, Corn root (2014) USA, Illinois conflicting CS,H,K,P,TH AFS054059 B.thuringiensis AFS054059 Plant, Corn core (2014) USA, Illinois clusterIV CS,H,K,P,TH HuB5-5 B.c_group HuB5-5 Soil Belgium clusterV CS,H,K,P,TH AFS034073 B.wiedmannii AFS034073 Plant, Soybean core (2014) USA, Iowa clusterII CS,H,K,P,TH BAG6O-2 B.c_group BAG6O-2 Soil USA, Massachusetts, Boston clusterVI CS,H,K,P,TH AFS093276 B.cereus AFS093276 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS059914 B.thuringiensis AFS059914 Plant, Corn core (2014) USA, Illinois clusterIV CS,H,K,P,TH A50 B.cereus A50 (2014) Australia clusterIV CS,H,K,P,TH AFS059650 B.cereus AFS059650 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS024429 B.wiedmannii AFS024429 Plant, Corn core (2014) USA, Illinois clusterII CS,H,K,P,TH FSLW8-0275 B.cereus FSL W8-0275 Dairy products, Raw liquid milk and whey perm (2012) USA, New York clusterIII CS,H,K,P,TH AFS051540 B.cereus AFS051540 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH VD048 B.c_group VD048 Soil Greenland clusterVI CS,H,K,P,TH Rock3-29 B.cereus Rock3-29 Soil USA, Maryland, Rockville clusterV CS,H,K,P,TH AFS034981 B.toyonensis AFS034981 Plant, Corn core (2014) USA, Illinois clusterV CS,H,K,P,TH AFS005140 B.thuringiensis AFS005140 Plant, Corn root (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS080672 B.wiedmannii AFS080672 Soil (2014) USA, New York clusterII CS,H,K,P,TH AFS007793 B.cereus AFS007793 Plant, Soybean core (2014) USA, Iowa conflicting CS,H,K,P,TH AFS001900 B.cereus AFS001900 Plant, Corn plant (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS099102 B.cereus AFS099102 Plant, Weed leaf (2014) USA, Indiana clusterIV CS,H,K,P,TH KBAB4 B.weihenstephanensis KBAB4 Soil, Forest soil (2000) France, Versailles clusterVI CS,H,K,P,TH AFS093065 B.toyonensis AFS093065 Plant, Soybean root (2014) USA, Iowa clusterV CS,H,K,P,TH AFS009906 B.toyonensis AFS009906 Plant, Corn core (2014) USA, Illinois clusterV CS,H,K,P,TH AFS035954 B.cereus AFS035954 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH MLY1 B.cereus MLY1 Other, activated sludge (2008) China, Shaoxing clusterIV CS,H,K,P,TH AFS089688 B.toyonensis AFS089688 Plant, Grass core (2014) USA, Iowa clusterV CS,H,K,P,TH ISSFR-23F B.cereus ISSFR-23F Other, Air from the International Space Station (ISS) (2011) clusterIII CS,H,K,P,TH ATCC9634 B.cereus ATCC9634 (NRRLB-1530) USA, New York clusterIV K AFS079591 B.anthracis AFS079591 Plant, Corn core (2014) USA, North Carolina clusterIII CS,H,K,P,TH AFS067297 B.cereus AFS067297 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH NVH0861/00 B.cereus NVH0861-00 (NVH0861/00) (2000) [diarrheal food poisoning outbreak] Norway clusterII CS,H,K,P,TH,AFLP3 AFS009709 B.pseudomycoides AFS009709 Plant, Soybean root (2014) USA, Iowa conflicting CS,H,K,P,TH SJ-S4 B.toyonensis SJ-S4 Human USA, Tennessee, Memphis clusterV CS,H,K,P,TH MOD1Bc75 B.cereus MOD1 Bc75 Plant, Sesame Seed (2015) USA, Maryland clusterIII CS,H,K,P,TH AFS008320 B.pseudomycoides AFS008320 Plant, Corn root (2014) USA, Iowa conflicting CS,H,K,P,TH AFS092108 B.thuringiensis AFS092108 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH MOD1Bc200 B.cereus MOD1 Bc200 Human, Baby Wipes (2016) USA, Maryland clusterIII CS,H,K,P,TH AFS061705 B.toyonensis AFS061705 Soil (2014) USA, New York clusterV CS,H,K,P,TH 7_6_55CFAA_CT2 B.c_group 7_6_55CFAA_CT2 Human, healthy biopsy tissue from a patient with Crohn-s disease clusterIV CS,H,K,P,TH AFS031137 B.wiedmannii AFS031137 Plant, core (2014) USA, North Carolina clusterII CS,H,K,P,TH AFS048418 B.cereus AFS048418 Soil (2014) USA, New York clusterVI CS,H,K,P,TH AFS034541 B.cereus AFS034541 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH GOE12 B.weihenstephanensis GOE12 Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014) Germany, Goettingen clusterVI CS,H,K,P,TH AFS050333 B.thuringiensis AFS050333 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH A16/LA896 B.anthracis A16/LA896 Animal, cattle (bovine) (Bos primigenius taurus) (1970) Switzerland clusterIII CS,H,K,P,TH IMSNU13043 B.cereus IMSNU13043 (KCTC1093) clusterII K MOD1Bc201 B.cereus MOD1 Bc201 Human, Baby Wipes (2016) USA, Maryland clusterIII CS,H,K,P,TH AFS069947 B.cereus AFS069947 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH London499 B.anthracis London 499 Animal hide (2006) UK, London clusterIII CS,H,K,P,TH AFS044295 B.wiedmannii AFS044295 Plant, Soybean root (2014) USA, Iowa clusterII CS,H,K,P,TH AFS038126 B.cereus AFS038126 Plant, Weed core (2014) USA, North Carolina clusterIV CS,H,K,P,TH B4264 B.cereus B4264 (2002734361) Human, blood and pleural fluid (1969) [human fatal pneumonia] clusterIV CS,H,K,P,TH BGSC4A4 B.thuringiensis thuringiensis HD120 (BGSC4A4, HDB-2) Animal, Insect, tobacco moth/cacao moth/warehouse moth (Ephestia elutella) UK, England clusterIV CS,H,K,P,TH AFS020202 B.toyonensis AFS020202 Plant, Weed plant (2014) USA, North Carolina clusterV CS,H,K,P,TH AFS046340 B.cereus AFS046340 Plant, Corn core (2014) USA, North Carolina conflicting CS,H,K,P,TH WSBC10035 B.cereus WSBC10035 Dairy products, pasteurized milk (1993) Germany clusterIII CS,H,K,P,TH Kafkas-215 B.anthracis Kafkas-215 Soil (2014) Turkey, Selim clusterIII CS,H,K,P,TH AFS007900 B.thuringiensis AFS007900 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS028541 B.toyonensis AFS028541 Plant, Corn core (2014) USA, Illinois clusterV CS,H,K,P,TH CVCS12 B.cereus CVC S12 Human, central venous catheter (2013) Pakistan, Lahore clusterIII CS,H,K,P,TH AFS064666 B.toyonensis AFS064666 Plant, Weed leaf (2014) USA, Ohio clusterV CS,H,K,P,TH MOD1Bc234 B.cereus MOD1 Bc234 Human, faeces/stools (2016) USA, Maryland clusterIII CS,H,K,P,TH FORC047 B.cereus FORC 047 Food, Salad (2015) South Korea, Gwangju clusterIV CS,H,K,P,TH AFS080604 B.cereus AFS080604 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS047607 B.thuringiensis AFS047607 Plant, Soybean leaf (2014) USA, Minnesota clusterIV CS,H,K,P,TH UT308 B.anthracis UT308 clusterIII CS,H,K,P,TH ATCC14185 B.anthracis ATCC14185 (K3700, A0267, LSU267, V770-NP-1R, V770-NP1-R) Animal, cattle (bovine) (1951) [United States Human Vaccine strain; pXO1+/pXO2-; two complete genomes sequenced for this strain with identical MLST sequences] USA, Florida clusterIII CS,H,K,P,TH,AFLP2 AFS054178 B.cereus AFS054178 Plant, Corn core (2014) USA, North Carolina conflicting CS,H,K,P,TH BGSC4M3#2 B.thuringiensis darmstadiensis HD146 (T10003, AH451, DSM6091, 10/103, BGSC4M1 or BGSC4M3, BGSC4M3#2) Animal, Insect, silkworm (Bombyx mori) (2013) [two complete genomes sequenced for this strain with different MLST sequences and origins; strain sequenced by Biology and Biochemistry, University of Bath, England, UK; sequences conflicting with isolate BGSC4M3#1] UK clusterIV CS,H,K,P,TH AFS094413 B.cereus AFS094413 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS066590 B.toyonensis AFS066590 Plant, Soybean leaf (2014) USA, Minnesota clusterV CS,H,K,P,TH A0157 B.anthracis A0157 (NR-1041) Animal, Pig (1996) [derived from strain ATCC4728; pXO1-/pXO2+] USA clusterIII CS,H,K,P,TH AFS079368 B.cereus AFS079368 Plant, core (2014) USA, North Carolina clusterVI CS,H,K,P,TH AFS062062 B.cereus AFS062062 Plant, Core Corn (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS083448 B.toyonensis AFS083448 Plant, Soybean leaf (2014) USA, Minnesota clusterV CS,H,K,P,TH AFS002371 B.wiedmannii AFS002371 Plant, Weed leaf (2014) USA, Indiana clusterII CS,H,K,P,TH AFS043516 B.toyonensis AFS043516 Plant, Weed leaf (2014) USA, Indiana clusterV CS,H,K,P,TH DE0298 B.thuringiensis DE0298 clusterIV CS,H,K,P,TH BT62 B.thuringiensis BT62 clusterIV CS,H,K,P,TH AFS006340 B.cereus AFS006340 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS073833 B.cereus AFS073833 Plant, Corn core (2014) USA, North Carolina conflicting CS,H,K,P,TH AFS052034 B.thuringiensis AFS052034 Plant, Soybean leaf (2014) USA, Minnesota clusterIV CS,H,K,P,TH AH603 B.c_group AH603 Dairy Norway, Gjoevik clusterVI CS,H,K,P,TH,MLEE BGSC4AX1 B.thuringiensis novosibirsk BGSC4AX1 (T24a001) Soil USSR clusterIV CS,H,K,P,TH BGSC4AW1#1 B.thuringiensis andalousiensis BGSC4AW1 (T37001, BGSC4AW1#1) [two complete genomes sequenced for this strain with different MLST sequences; strain sequenced by Biological Defense Research Directorate (BDRD), Rockville, Maryland, USA; sequences conflicting with isolate BGSC4AW1#2] Spain clusterIII CS,H,K,P,TH I161 B.cereus I161 Plant, Grass (2017) Israel, Karie Deshe clusterIV CS,H,K,P,TH MOD1Bc196 B.cereus MOD1 Bc196 Human, Baby Wipes (2016) USA, Maryland clusterIII CS,H,K,P,TH AFS054835 B.thuringiensis AFS054835 Plant, Corn leaf (2014) USA, Iowa clusterIV CS,H,K,P,TH MH19 B.cereus MH19 Soil (2017) [two complete genomes sequenced for this strain with identical MLST sequences] China, Luoyang clusterIII CS,H,K,P,TH 3631_1C B.anthracis 3631_1C Animal, greater kudu (Tragelaphus strepsiceros) (2009) [from a sporadic anthrax outbreak; pXO1+/pXO2-] South Africa, Northern Cape Province, Klipfontein clusterIII CS,H,K,P,TH AFS036256 B.toyonensis AFS036256 Plant, Soybean root (2014) USA, Missouri clusterV CS,H,K,P,TH F1-15 B.cereus F1-15 clusterIII CS,H,K,P,TH FSLM8-0091 B.cereus FSL M8-0091 Dairy products, raw milk (2012) USA clusterII CS,H,K,P,TH AFS081127 B.toyonensis AFS081127 Plant, Soybean core (2014) USA, Iowa clusterV CS,H,K,P,TH VDM006 B.c_group VDM006 Soil Spain conflicting CS,H,K,P,TH CER074 B.weihenstephanensis CER074 Dairy products, Dairy products, raw milk [emetic toxin/cereulide producer toxin/cereulide producer] Belgium clusterVI CS,H,K,P,TH ANSES92 B.anthracis ANSES92 clusterIII CS,H,K,P,TH AFS043837 B.cereus AFS043837 Plant, Corn core (2014) USA, North Carolina conflicting CS,H,K,P,TH K1129 B.anthracis K1129 Animal, goat hair (1995) Pakistan clusterIII CS,H,K,P,TH G9842 B.cereus G9842 Human, faeces/stools (1996) [from the same food poisoning outbreak as isolates G9843 and G9844; human diarrhea] USA, Nebraska clusterIV CS,H,K,P,TH AFS015248 B.anthracis AFS015248 (2014) USA, North Carolina clusterIII CS,H,K,P,TH UBA5991 B.cereus UBA5991 clusterIV CS,H,K,P,TH Kafkas-78 B.anthracis Kafkas-78 Animal, Cattle (2008) Turkey, Kars clusterIII CS,H,K,P,TH MOD1Bc122 B.cereus MOD1 Bc122 Food, Paprika (2015) USA, Maryland clusterIII CS,H,K,P,TH AFS067996 B.cereus AFS067996 Plant, Corn core (2014) USA, North Carolina clusterIV CS,H,K,P,TH MOD1Bc140 B.cereus MOD1 Bc140 Food, Dietary Supplements (2015) USA, Maryland clusterIII CS,H,K,P,TH AFS089527 B.cereus AFS089527 Plant, Soybean core (2014) USA, Iowa clusterIV CS,H,K,P,TH AFS010456 B.cereus AFS010456 Soil (2014) USA, New York clusterVI CS,H,K,P,TH BGSC4BU1 B.thuringiensis pirenaica BGSC4BU1 Spain clusterIV CS,H,K,P,TH AFS094329 B.thuringiensis AFS094329 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH AFS038754 B.cereus AFS038754 Soil (2013) USA, North Carolina clusterIV CS,H,K,P,TH BGSC4R1 B.thuringiensis indiana or dakota BGSC4R1 clusterIV CS,H,K,P,TH AFS085496 B.thuringiensis AFS085496 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH K2129 B.anthracis K2129 (1997) China, Changping clusterIII CS,H,K,P,TH AFS023094 B.wiedmannii AFS023094 Plant, Soybean core (2014) USA, Iowa clusterII CS,H,K,P,TH CAU-1 B.anthracis GJ-1 (CAU-1) Human, blood (1994) [septicaemia anthrax; pXO1+/pXO2+; pXO1+/pXO2+] South Korea, Kyungjoo City clusterIII K,P AFS075408 B.thuringiensis AFS075408 Soil (2013) USA, North Carolina clusterIV CS,H,K,P,TH AFS065610 B.wiedmannii AFS065610 Soil (2014) USA, New York clusterII CS,H,K,P,TH AFS095385 B.toyonensis AFS095385 Plant, Corn root (2014) USA, Iowa clusterV CS,H,K,P,TH MOD1Bc86 B.cereus MOD1 Bc86 Food, Whole Black Pepper (2015) USA, Maryland clusterIV CS,H,K,P,TH AFS072190 B.toyonensis AFS072190 Plant, Corn root (2014) USA, Iowa clusterV CS,H,K,P,TH AFS005149 B.pseudomycoides AFS005149 Soil (2014) USA, New York conflicting CS,H,K,P,TH ATCC10792#1 B.thuringiensis thuringiensis type strain ATCC10792 (IMSNU12088, DSM2046, WS2734, AH1083, HD735, CIP53.137, KCTC3452, KCTC1034, BGSC4A11, ATCC10792#1) [three complete genomes sequenced for this strain with different sequences and origins; strain sequenced by Department of Food Science and Biotechnology College of Biotechnology and Bioscience, Kangwon National University, Chunchon, South Korea; sequences conflicting with isolates ATCC10792#2 and ATCC10792#3] clusterIV CS,H,K,P,TH 2968 B.anthracis BA2968 Animal, cattle (bovine) (Bos primigenius taurus) (2008) Finland, Helsinki clusterIII CS,H,K,P,TH AFS053866 B.wiedmannii AFS053866 Plant, Corn leaf (2014) USA, Illinois clusterII CS,H,K,P,TH MOD1Bc185 B.cereus MOD1 Bc185 Human, Baby Wipes (2016) USA, Maryland clusterIII CS,H,K,P,TH AFS095380 B.toyonensis AFS095380 (2014) USA, Iowa clusterV CS,H,K,P,TH AFS091268 B.toyonensis AFS091268 Plant, Corn root (2014) USA, Ohio clusterV CS,H,K,P,TH BMG1.7 B.c_group BMG1.7 conflicting CS,H,K,P,TH 55-VNIIVViM B.anthracis 55-VNIIVViM Other, Commercial vial (2014) Georgia, Tbilisi clusterIII CS,H,K,P,TH AFS099677 B.thuringiensis AFS099677 Plant, core (2014) USA, North Carolina clusterIV CS,H,K,P,TH I130 B.wiedmannii I130 Plant, Grass (2017) Israel, Ramat HaNadiv clusterII CS,H,K,P,TH AFS082524 B.cereus AFS082524 Plant, Soybean core (2014) USA, Iowa conflicting CS,H,K,P,TH LCT-BC235 B.cereus LCT-BC235 Other, culture sent to space aboard the Shenzhou-8 spacecraft; isolated after space flight clusterIII CS,H,K,P,TH IMSNU12092 B.thuringiensis pakistani IMSNU12092 (KCTC1512) clusterIV K AFS026256 B.toyonensis AFS026256 Plant, Soybean leaf (2014) USA, Minnesota clusterV CS,H,K,P,TH DS201579 B.anthracis DS201579 Animal, Blue Wildebeest (Connochaetes taurinus) (2015) South Africa, Kruger National Park, Pafuri clusterIII CS,H,K,P,TH PE8-15 B.mycoides PE8-15 Animal, marine sponge (Spongia sp.) (2013) South Africa, Algoa Bay, White Sands Reef, Indian Ocean, Port Elizabeth clusterVI CS,H,K,P,TH BGSC4BY1 B.thuringiensis sylvestriensis BGSC4BY1 (T61001, Pbt53) Plant, Scotch pine [sequences conflicting with isolate T61001] Denmark clusterII CS,H,K,P,TH BGSC4AF1 B.thuringiensis cameroun T32001 (BGSC4AF1, 273B) Soil Cameroon clusterV CS,H,K,P,TH,AFLP3 AFS076343 B.pseudomycoides AFS076343 Plant, Soybean core (2014) USA, Iowa conflicting CS,H,K,P,TH AFS027647 B.cereus AFS027647 Plant, Core Other Plant (2014) USA, North Carolina conflicting CS,H,K,P,TH 0711P9-1 B.mobilis type strain 0711P9-1 (MCCC1A05942, KCTC33717, LMG28877) Other, sediments (2007) Indian Ocean clusterII CS,H,K,P,TH MOD1Bc99 B.cereus MOD1 Bc99 Other, Oxytetracycline Medicated Fish Feed (2006) USA, Maryland clusterIII CS,H,K,P,TH BGSC4CA1 B.thuringiensis yosoo BGSC4CA1 South Korea clusterIV CS,H,K,P,TH AFS080704 B.cereus AFS080704 Plant, core (2014) USA, North Carolina clusterII CS,H,K,P