$VAR1 = 'page'; $VAR2 = 'showconflictingisolates'; $VAR3 = 'dbase'; $VAR4 = 'superdb'; $VAR5 = 'file'; $VAR6 = 'bcereusgrp_isolates.xml'; Expires: Sun, 29 Nov 2020 14:28:01 GMT Date: Sat, 28 Nov 2020 14:28:01 GMT Content-Type: text/html; charset=ISO-8859-1 Bacillus cereus group Multi-Scheme MLST SuperDatabase

B. cereus group Conflicting Isolates

Below is the list of the 0 isolates that have been excluded from the main SuperCAT MLST database because their genotyping profiles are unreliable. Isolates highlighted in purple exhibit conflicting phylogenetic positions among MLST schemes and/or typing methods, and isolates highlighted in red exhibit conflicting typing data from different collections or databases. Even though MLST data only are considered in the current database, the fact that, for some isolates, other typing methods (such as AFLP and MLEE) give different phylogenetic results indicate that the phylogenetic positions of those particular isolates are uncertain, and therefore the isolates are not taken into account in SuperCAT.
A comparison of the phylogenetic positions of the conflicting isolates based on data from the various MLST schemes can be obtained using the tools provided here, and a comparison based on MLST, AFLP, and MLEE typing methods can be obtained at the corresponding page in the multi-datatype HyperCAT database.



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Click here to save the table as a tab-delimited text file. Click on strain name to get full information and sequences for a given isolate. Alternative strain names are given in parentheses in the strain description. Species name "B.c_group" represents uncharacterized B.cereus group strains. G indicates isolates with completely sequenced genomes.
Note: MLST schemes are abbreviated as follows: TH, Tourasse-Helgason; H, Helgason; K, Ko; P, Priest; CS, Candelon-Sorokin.
straindescriptionsourcelocationscheme(s)