$VAR1 = 'num'; $VAR2 = '5886'; $VAR3 = 'page'; $VAR4 = 'sharedisolatemethodstable'; $VAR5 = 'dbase'; $VAR6 = 'hyperdb'; $VAR7 = 'file'; $VAR8 = 'bcereusgrp_isolates.xml'; $VAR9 = 'line'; $VAR10 = '6'; $VAR11 = 'overlap'; $VAR12 = 'overlapfile986584.txt'; Expires: Wed, 27 Jan 2021 00:20:11 GMT Date: Tue, 26 Jan 2021 00:20:11 GMT Content-Type: text/html; charset=ISO-8859-1 Bacillus cereus group Multi-Datatype MLST+AFLP+MLEE SuperDatabase

Information on strain overlap between B. cereus group typing methods


111 isolates common to the mlee and mlst typing methods among the 5886 strains currently selected.



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Click here to save the table as a tab-delimited text file. Click on strain name to get full information and sequences for a given isolate. Alternative strain names are given in parentheses in the strain description. Species name "B.c_group" represents uncharacterized B.cereus group strains. G indicates isolates with completely sequenced genomes.
Note: MLST schemes are abbreviated as follows: TH, Tourasse-Helgason; H, Helgason; K, Ko; P, Priest; CS, Candelon-Sorokin.
AFLP studies are abbreviated as follows: AFLP1, Ticknor; AFLP2, Hill; AFLP3, Guinebretiere
.
straindescriptionsourcelocationclustertyping data
III-BLB.cereus III-BL (97-25, AH1253)[Pasteur Institute]France, ParisclusterIIIP,MLEE
DSM11821GB.weihenstephanensis type strain WSBC10204 (DSM11821, AH1145, KB008, NBRC101238)Dairy products, pasteurized milk (1992) [from the same dairy as isolates WSBC10028, WSBC10029, WSBC10030, WSBC10031, WSBC10042, WSBC10201, WSBC10205, WSBC10206, WSBC10208, and WSBC10211; two complete genomes sequenced for this strain with identical MLST sequences; sequences conflicting with isolate WSBC10204] clusterVICS,H,K,P,TH,AFLP3,MLEE
AH891B.c_group AH891Human, bloodNorway, OsloclusterIIITH,MLEE
AH820GB.c_group AH820Human, periodontitis (1995)Norway, AkershusclusterIIICS,H,K,P,TH,MLEE
AH553B.c_group AH553Soil, cabbage field (1993)Norway, MossclusterIIH,TH,AFLP1,MLEE
AH840B.c_group AH840 (BGSC4A3, T01001, HD2)[sequences conflicting with isolate T01001] clusterIIIH,TH,MLEE
AH641B.c_group AH641Soil, heather soil (1994)Norway, Singsaas/SaeterengclusterVIH,TH,AFLP1,MLEE
AH725GB.cereus AH725Human, eye (1995)Norway, SkienclusterIVCS,H,K,P,TH,MLEE
AH621GB.c_group AH621Soil, heather soil (1994)Norway, Singsaas/SaeterengclusterVICS,H,K,P,TH,AFLP1,MLEE
AH251B.thuringiensis kenyae BGSC4F3 (AH251, AH1302, HD293)Animal, Insect, Almond moth (Ephestia cautella/Cadra cautella)USAclusterIVH,P,TH,AFLP2,MLEE
AH676#1B.c_group AH676 (AH676#1)Soil, heather soil (1994) [data from University of Oslo, Norway; sequences conflicting with isolate AH676#2]Norway, TromsoeclusterVIH,TH,AFLP1,MLEE
AH823B.c_group AH823Human, periodontitis (1996)Norway, OsloclusterIIIH,TH,MLEE
AH1130B.c_group BC008 (AH1130)Human, eyeUSA, OklahomaclusterIVTH,MLEE
7700B.anthracis Sterne 7700 (95-31)[pXO1-/pXO2-]AfricaclusterIIIH,TH,MLEE
AH1131B.c_group BC029 (AH1131)Human, eyeUSA, OklahomaunclusteredH,TH,MLEE
AH816B.c_group AH816Human, periodontitis (1995)Norway, AkershusclusterIIIH,TH,MLEE
AH726B.c_group AH726Human, urineNorway, SkienclusterIVH,TH,MLEE
AH547B.c_group AH547Soil, cabbage field (1993)Norway, MossclusterVIH,TH,AFLP1,AFLP2,MLEE
AH721B.c_group AH721Human, urineNorway, SkienclusterIVH,TH,MLEE
IVB.c_group IV  clusterIIIP,MLEE
AH519B.c_group AH519Soil, strawberry field (1993)Norway, MossclusterIIH,TH,AFLP1,MLEE
AH718B.c_group AH718Human, noseNorway, SkienclusterIVH,TH,MLEE
AH632B.c_group AH632Soil, heather soil (1994)Norway, Singsaas/SaeterengclusterVIH,TH,AFLP1,AFLP2,MLEE
AH818B.c_group AH818Human, periodontitis (1995)Brazil, CuritibaclusterIIIH,TH,MLEE
AH728B.c_group AH728Human, urineNorway, SkienclusterIIIH,TH,MLEE
AH716B.c_group AH716Human, pusNorway, SkienclusterIVH,TH,MLEE
AH723B.c_group AH723Human, eyeNorway, SkienclusterIIITH,MLEE
AH536B.c_group AH536Soil, strawberry field (1993)Norway, MossclusterIIH,TH,AFLP1,MLEE
AH408B.c_group AH408DairyFinland, ValioclusterVIH,TH,MLEE
AH663B.c_group AH663Soil, woodland soil (1994)Norway, BrekkvasselvclusterVIH,TH,AFLP1,MLEE
AH825B.c_group AH825Human, periodontitis (1996)Norway, AkershusclusterIIIH,TH,MLEE
AH831B.c_group AH831Human, periodontitis (1996)Norway, OsloclusterIIIH,TH,MLEE
AH614B.c_group AH614DairyNorway, PorsgrunnclusterVIH,TH,MLEE
IIIB.c_group III IraqclusterIIIP,MLEE
AH1129B.c_group BC004 (AH1129)Human, eyeUSA, OklahomaclusterIVH,TH,MLEE
2C1B.c_group 2C1 (AH1139)Soil [non-pathogenic; Pasteur Institute]France, ParisclusterVP,MLEE
97-27GB.thuringiensis konkukian 97-27 (97/027, CEB97/27, CEB97/027, AH1248)Human, tissue necrosis (1995) [two complete genomes sequenced for this strain with identical MLST sequences]Yugoslavia, Bosnia-Herzegovina, SarajevoclusterIIICS,H,K,P,TH,AFLP2,MLEE
AH572B.c_group AH572Soil, beech grove (1993)Norway, MossclusterIIH,TH,AFLP1,MLEE
ATCC10987#1GB.cereus ATCC10987 (AH75, NRS248, 6A15, ATCC10987#1)Dairy products, Cheese (1930)CanadaclusterIIICS,H,K,P,TH,AFLP1,AFLP3,MLEE
AH830B.c_group AH830Human, periodontitis (1995)Norway, OsloclusterIIIH,TH,MLEE
AH675B.c_group AH675Soil, heather soil (1994)Norway, TromsoeclusterVIH,TH,AFLP1,MLEE
AH685B.c_group AH685Soil, heather soil (1994)Norway, TromsoeclusterVIH,TH,AFLP1,MLEE
ATCC33018B.cereus ATCC33018 (AH233, 208, ENSP5, LFB208)Dairy products, powdered milk-base infant formulaeColombiaclusterIIP,MLEE
AH1123B.c_group 9823 (AH1123)HumanFranceclusterIIIH,TH,MLEE
AH645B.c_group AH645Soil, heather soil (1994)Norway, SteigenclusterVIH,TH,AFLP1,MLEE
AH824B.c_group AH824Human, periodontitis (1996)Norway, AkershusclusterIIIH,TH,MLEE
AH1134GB.cereus BC006 (AH1134)Human, eye [pediatric endophthalmitis case]USA, OklahomaclusterIVCS,H,K,P,TH,MLEE
BGSC4I5B.thuringiensis subtoxicus BGSC4I5 (AH254, HD109) CanadaclusterIVP,AFLP2,MLEE
AH1126B.c_group 9842 (AH1126)HumanFranceclusterVTH,MLEE
AH829B.c_group AH829Human, periodontitis (1996)Norway, AkershusclusterIIIH,TH,MLEE
BGSC6A1B.cereus T (BGSC6A1, AH259, KB002)Other, wild type isolate clusterIVCS,P,MLEE
AH893B.cereus AH893Human, woundNorway, TromsoeclusterIIITH,MLEE
AH886B.c_group AH886Human, bloodNorway, OsloclusterIIITH,MLEE
ATCC4342GB.cereus ATCC4342 (AH226, AH821)Dairy products, milk (1900) [sensitive to gamma phage infecting B.anthracis; two complete genomes sequenced for this strain with identical MLST sequences]USAclusterIIICS,H,K,P,TH,AFLP1,AFLP2,MLEE
AH817B.c_group AH817Human, periodontitis (1995)Norway, AkershusclusterIIIH,TH,MLEE
AH546B.c_group AH546Soil, cabbage field (1993)Norway, MossclusterIVH,TH,AFLP1,MLEE
AH542B.c_group AH542Soil, strawberry field (1993)Norway, MossclusterIIH,TH,AFLP1,MLEE
F4810/72GB.cereus F4810/72 (AH187, KBBI2, FHL4810, NCTC11143, DSM4312, SMR178)Human, vomit (1972) [emetic food poisoning outbreak; human vomiting; reference emetic toxin/cereulide producer]UKclusterIIICS,H,K,P,TH,AFLP2,AFLP3,MLEE
AH730B.c_group AH730Human, urineNorway, SkienclusterIIITH,MLEE
AH1125B.c_group 9801 (AH1125)HumanFranceclusterIITH,MLEE
AH814B.c_group AH814Human, periodontitis (1995)Norway, AkershusclusterIVTH,MLEE
ATCC11778B.c_group ATCC11778 (IMSNU11013, AH182, AH1086, 152, DSM4490, NCTC10320, KCTC1012, PCI213)[B.cereus or B.mycoides]USA, New YorkclusterIVK,P,AFLP1,AFLP2,AFLP3,MLEE
PEYR8B.c_group PEYR8 (AH1137)Soil [non-pathogenic; Pasteur Institute]France, ParisclusterVP,MLEE
AH650B.c_group AH650Soil, heather soil (1994)Norway, SteigenclusterVIH,TH,AFLP1,MLEE
BGSC4C1GB.thuringiensis alesti BGSC4C1 (AH842, HD16, CCEB463)Animal, Insect, silkworm (Bombyx mori) (1987) [two complete genomes sequenced for this strain with identical MLST sequences]CzechoslovakiaclusterIVCS,H,K,P,TH,AFLP2,MLEE
AH407B.c_group AH407DairyFinland, ValioclusterVIH,TH,MLEE
AH1247B.c_group 97-79 (AH1247)Soil (1997) [from the site of an anthrax outbreak]France, Pyrenees mountainsclusterVH,TH,MLEE
ATCC6464B.cereus ATCC6464 (AH225, KBBI5)Soil clusterIVCS,AFLP1,MLEE
AH826B.c_group AH826Human, periodontitis (1996)Norway, RogalandclusterIIIH,TH,MLEE
AH729B.c_group AH729Human, wound secretNorway, SkienclusterIITH,MLEE
AH828B.c_group AH828Human, periodontitis (1996)Norway, OsloclusterIIIH,TH,MLEE
AH815B.c_group AH815Human, periodontitis (1995)Norway, More og RomsdalclusterIVTH,MLEE
III-BSB.cereus III-BS (97-26, AH1254)[Pasteur Institute]France, ParisclusterIIIP,MLEE
AH230B.thuringiensis ATCC21282 (AH230)  clusterIIIH,TH,MLEE
PEYR9B.c_group PEYR9 (AH1138)Soil [non-pathogenic; Pasteur Institute]France, ParisclusterVP,MLEE
AH681B.c_group AH681Soil, heather soil (1994)Norway, TromsoeclusterVIH,TH,AFLP1,MLEE
AH1135B.c_group S8553 (AH1135)Soil, clearing station mud (1997) [from the site of an anthrax outbreak]France, Alps mountainsclusterIIIH,TH,MLEE
3466-8.1B.c_group 3466-8.1 (AH1141)Soil [non-pathogenic; Pasteur Institute]France, ParisclusterVP,MLEE
WSBC10202B.weihenstephanensis WSBC10202 (AH1144)Dairy products, pasteurized milk (1999)GermanyclusterVIP,AFLP3,MLEE
AH1132B.c_group BC030 (AH1132)Human, eyeUSA, OklahomaclusterIVH,TH,MLEE
AH889B.c_group AH889Human, bloodNorwayclusterIVH,TH,MLEE
ATCC33019B.cereus ATCC33019 (AH234, 209, ENSP6, LFB1122)Dairy products, powdered milk-base infant formulaeColombiaclusterIVP,MLEE
AH603GB.c_group AH603DairyNorway, GjoevikclusterVICS,H,K,P,TH,MLEE
AH664B.c_group AH664Soil, woodland soil (1994)Norway, BrekkvasselvclusterVIH,TH,AFLP1,MLEE
Bt407GB.thuringiensis 407 (Bt407, AH1031)[Pasteur Institute; well studied isolate that has been cured of the plasmid that encodes the insecticidal crystal toxin; three complete genomes sequenced for this strain with identical MLST sequences]France, ParisclusterIVCS,H,K,P,TH,MLEE
AH727B.c_group AH727Human, pusNorway, SkienclusterIIH,TH,MLEE
003B.c_group 003 (3) IraqclusterIIIP,MLEE
AH812B.c_group AH812Human, periodontitis (1995)Norway, OsloclusterIIIH,TH,MLEE
AH717B.c_group AH717Human, skinNorway, SkienclusterIITH,MLEE
AH719B.c_group AH719Human, cervixNorway, SkienclusterVITH,MLEE
AH403B.c_group AH403DairyNorwayclusterVIH,TH,MLEE
AH811B.c_group AH811Human, periodontitis (1995)Brazil, Sao Jose dos PinhaisclusterIVH,TH,MLEE
AH720B.c_group AH720Human, bloodNorway, SkienclusterVITH,MLEE
AH535B.c_group AH535Soil, strawberry field (1993)Norway, MossclusterVITH,AFLP1,AFLP2,MLEE
AH819B.c_group AH819Human, periodontitis (1995)Norway, OsloclusterIIIH,TH,MLEE
AH1133B.c_group BC031 (AH1133)Human, eyeUSA, OklahomaunclusteredTH,MLEE
ATCC33679B.thuringiensis kurstaki ATCC33679 (KCTC1507, AH1084, NRRLB-3792, HD1)Animal, diseased insect larvae [sequences conflicting with isolates BGSC4D1, HD1#1, HD1#2, and HD1#3] clusterIVK,P,AFLP1,AFLP2,AFLP3,MLEE
AH684B.c_group AH684Soil, heather soil (1994)Norway, TromsoeclusterVIP,AFLP1,MLEE
AH1127B.c_group 9843 (AH1127)HumanFranceclusterIIIH,TH,MLEE
AH810B.c_group AH810Human, periodontitis (1994)Norway, TelemarkclusterIIIH,TH,MLEE
IBB.c_group (IB or 1B) IraqclusterIIIP,MLEE
AH827B.c_group AH827Human, periodontitis (1996)Norway, HedmarkclusterIIIH,TH,MLEE
AH607B.c_group AH607DairyNorway, TynsetclusterIIH,TH,MLEE
AH627B.c_group AH627Soil, heather soil (1994)Norway, Singsaas/SaeterengclusterVIH,TH,AFLP1,MLEE
AH1124B.c_group 9829 (AH1124)HumanFranceclusterIIITH,MLEE
AH267B.c_group AH267HumanNorwayclusterIIIH,TH,MLEE
AH678B.c_group AH678Soil, heather soil (1994)Norway, TromsoeclusterVIH,TH,AFLP1,AFLP2,MLEE
AH338B.mycoides AH338Soil (1992)Norway, OsloclusterVTH,MLEE
ATCC53522GB.cereus ATCC53522 (AH1085, UW85, DSM6791)Plant, roots of field-grown alfalfa/Lucerne grass (Medicago sativa) (1985)USA, Wisconsin, ArlingtonclusterIVCS,H,K,P,TH,AFLP1,AFLP2,MLEE
AH813B.c_group AH813Human, periodontitis (1995)Brazil, CuritibaclusterIIIH,TH,MLEE
WSBC10201B.weihenstephanensis WSBC10201 (AH1143)Dairy products, pasteurized milk (1992) [from the same dairy as isolates WSBC10028, WSBC10029, WSBC10030, WSBC10031, WSBC10042, WSBC10204, WSBC10205, WSBC10206, WSBC10208, and WSBC10211]Germany, WeihenstephanclusterVITH,AFLP3,MLEE