MLST+MLEE+AFLP Oslo Home HyperCAT Home Strain Statistics Typing Data Distribution Strain Distribution Data Overlap Supertree Info Supercluster Info Data Info and Submission

Bacillus cereus group Multi-Datatype MLST+AFLP Superclusters

The isolates were combined into 455 distinct groups (superclusters), which are detailed below. The superclusters include a total of 3718 isolates.
There are also 1605 singletons, i.e., isolates that do not share a typing profile with any other isolate (i.e., isolates that have unique genotypes). They are listed here.

The superclusters contain isolates sharing identical MLST sequences and/or having identical AFLP profiles and are shown in the tables below. The list of shared MLST schemes and/or alleles is also given (if any). In a given supercluster, every isolate in the table shares the listed loci and/or AFLP profiles with at least one other strain in the group. Press the "Show Network" button to display a network showing what data are shared among which strains (if the group contains 3 isolates or more). Click on the strain name to get full information and links to MLST allele sequences and/or AFLP studies for a given isolate.
MLST schemes are abbreviated as follows: TH, Tourasse−Helgason; H, Helgason; K, Ko; P, Priest; CS, Candelon−Sorokin.
AFLP studies are abbreviated as follows: AFLP1, Ticknor; AFLP2, Hill; AFLP3, Guinebretiere.

In addition, you may press the "Show in Supertree" button to mark the isolates of a supercluster in red in the MLST+AFLP supertree using the Java Archaeopteryx tree viewer. Press the "Extract Subtree" button to display the subtree containing only the isolates of the supercluster (if the group contains 3 isolates or more). The branches of the tree will be colored according to the major phylogenetic clusters of the B. cereus group population, with the following keys:
clusterI,clusterII,clusterIII,clusterIV,clusterV,clusterVI,clusterVII,unclustered.


The trees and subtrees can be saved either in color in PhyloXML format with the associated Archaeopteryx configuration file for viewing with Archaeopteryx (you will need an utility such as "zip/unzip" on Unix/Mac or "WinZip" on Windows to open the files), or in standard (uncolored) Newick/NewHampshire format.

148 isolate(s) sharing typing data in supercluster 1

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.cereus ATCC53522Plant, roots of field-grown alfalfa/Lucerne grass (Medicago sativa) (1985)USA, Wisconsin, ArlingtonAFLP2 MLST(TH, H, K, CS, P)
B.thuringiensis AFS058113Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS075082Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS009218Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS047635Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS039999Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4AD1SoilUSSR, RussiaMLST(TH, H, K, CS, P)
B.thuringiensis AFS029963Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS016919Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS094940Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS052460Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus MLY1Other, activated sludge (2008)China, ShaoxingMLST(TH, H, K, CS, P)
B.thuringiensis AFS071454Plant, Soybean root (2014)USA, MissouriMLST(TH, H, K, CS, P)
B.thuringiensis AFS066710Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS036350Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS002920Plant, Soybean seed (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS053744Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.thuringiensis AFS048014Plant, Soybean leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS054343Plant, Corn root (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.c_group HuB1-1SoilBelgiumMLST(TH, H, K, CS, P)
B.thuringiensis AFS052778Soil (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS026252Plant, Corn (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS061455Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS031631Plant, Corn root (2013)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS048789Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS016894Soil (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS027178Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS097488Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS055854Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS045572Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS020608Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS061653Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS043555Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.c_group BAG1O-3SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.thuringiensis AFS023418Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS063894Food, Mushroom (2013)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS065707Soil (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS059242Other, excrement (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS029475Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS011673Plant, Soybean root (2013)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS076260Plant, Corn grainbin dust (2014)USA, IowaMLST(TH, H, K, CS, P)
B.c_group BAG1X1-2SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.thuringiensis AFS020128Plant, Soybean root (2013)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS095788Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS059526Plant, Corn grainbin dust (2013)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS014334Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS009644Plant, tree leaf (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS056615Plant, Soybean leaf (2014)USA, MissouriMLST(TH, H, K, CS, P)
B.thuringiensis AFS067634Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4AG1Other, grain siloFranceMLST(TH, H, K, CS, P)
B.thuringiensis AFS096978Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS055282Plant, Corn leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS043063Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS014145Plant, Soybean root (2013)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS005083Plant, leaf (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS066836Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS059931Soil (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS009253Plant, tree leaf (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS076597Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS083288Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS078332Plant, Weed plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS040286Plant, Corn seed (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS071638Plant, Soybean root (2013)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS048765Plant, Soybean root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS045516Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS059914Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS090477Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS067605Food, Mushroom (2013)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS061177Plant, Soybean leaf (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS030179Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS011084Plant, Soybean root (2014)USA, MissouriMLST(TH, H, K, CS, P)
B.thuringiensis AFS022658Plant, Soybean leaf (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS055002Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS015432Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS018179Plant, Corn grainbin dust (2013)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS024615Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS002866Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS006689Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS097856Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS026926Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS049152Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS059517Plant, Corn grainbin dust (2013)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS040001Plant, Corn root (2014)USA, IowaMLST(K, CS, P, adk, ftsa, glpt, pyre, recf, succ)
B.thuringiensis AFS092108Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, P, dinb, gdpd, purf, yhfl)
B.thuringiensis AFS071939Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, P, clpc, dinb, gdpd, purf)
B.thuringiensis AFS011939Plant, Soybean root (2014)USA, IowaMLST(H, K, P, clpc, dinb, gdpd, purf, yhfl)
B.thuringiensis AFS079576Plant, core (2014)USA, North CarolinaMLST(TH, H, CS, P, gyrb, mbl, muts, pyca1, rpob)
B.thuringiensis AFS094329Plant, core (2014)USA, North CarolinaMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.thuringiensis AFS087171Plant, core (2014)USA, North CarolinaMLST(H, K, CS, glpf, gmk, ilvd, purh, pyca2, tpi)
B.thuringiensis AFS031651Animal, Insect, beetle (2013)USA, North CarolinaMLST(TH, H, CS, P, gyrb, mbl, muts, pyca1, rpob)
B.thuringiensis AFS059559Soil (2014)USA, North CarolinaMLST(TH, H, K, P, clpc, dinb, gdpd, yhfl)
B.thuringiensis AFS065753Animal, earthworm (2013)USA, MinnesotaMLST(K, CS, P, ccpa, ftsa, glpt, pyre, recf, succ)
B.thuringiensis AFS005023(2014)USA, North CarolinaMLST(TH, H, K, P, dinb, gdpd, purf, yhfl)
B.thuringiensis AFS009835Soil (2014)USA, New YorkMLST(TH, H, K, P, clpc, dinb, purf, yhfl)
B.thuringiensis AFS045814(2014)USA, North CarolinaMLST(TH, H, CS, P, mbl, mdh, muts, pyca1, rpob)
B.thuringiensis AFS025854Plant, Soybean core (2014)USA, IowaMLST(TH, K, CS, P, ftsa, recf, succ)
B.thuringiensis AFS021667Plant, Corn core (2014)USA, IllinoisMLST(TH, H, CS, P, gyrb, mbl, mdh, pyca1, rpob)
B.thuringiensis AFS041586Plant, Grass core (2014)USA, IowaMLST(TH, H, K, P, clpc, gdpd, purf, yhfl)
B.thuringiensis AFS023506Plant, Soybean core (2014)USA, IowaMLST(TH, K, CS, P, ftsa, pyre, succ)
B.thuringiensis AFS012232Plant, Weed plant (2014)USA, IndianaMLST(TH, H, K, P, dinb, gdpd, purf)
B.thuringiensis AFS034126Plant, Corn core (2014)USA, IllinoisMLST(TH, H, CS, gmk, gyrb, ilvd, mbl, mdh, muts, purh, rpob)
B.thuringiensis AFS082639Plant, core (2014)USA, North CarolinaMLST(TH, H, K, P, dinb, gdpd, yhfl)
B.thuringiensis AFS023641Plant, core (2014)USA, North CarolinaMLST(H, K, clpc, dinb, gmk, ilvd, panc, pta, purf, purh, pyca2, tpi, yhfl)
B.thuringiensis AFS019545Plant, core (2014)USA, North CarolinaMLST(TH, H, CS, P, gyrb, mbl, pyca1, rpob)
B.thuringiensis AFS003097(2014)USA, North CarolinaMLST(TH, H, K, P, clpc, dinb, gdpd)
B.thuringiensis AFS054835Plant, Corn leaf (2014)USA, IowaMLST(TH, H, CS, gyrb, ilvd, mbl, mdh, purh, pyca1, rpob, tpi)
B.thuringiensis AFS063640Plant, Corn core (2014)USA, IllinoisMLST(TH, H, P, clpc, dinb, gyrb, mbl, mdh, purf, pyca1, rpob, yhfl)
B.thuringiensis AFS005011Plant, Weed plant (2014)USA, IndianaMLST(H, CS, glpf, gmk, gyrb, ilvd, mbl, muts, purh, pyca1, pyca2, rpob)
B.thuringiensis AFS089732Plant, Corn core (2014)USA, IllinoisMLST(TH, P, dinb, ftsa, gdpd, gyrb, mbl, mdh, purf, pyca1, recf, rpob, succ, yhfl)
B.cereus MOD1Bc83Food, Whole Black Pepper (2015)USA, MarylandMLST(TH, H, P, clpc, dinb, gyrb, mdh, muts, purf, pyca1, rpob)
B.thuringiensis B-2012Other, Sediments (2002)Pacific OceanMLST(CS, P, adk, ccpa, ftsa, gyrb, mbl, mdh, muts, pyre, recf, rpob)
B.thuringiensis AFS029767Plant, Soybean leaf (2014)USA, MinnesotaMLST(H, K, clpc, gdpd, glpf, gmk, ilvd, pta, purf, pyca2, tpi, yhfl)
B.thuringiensis AFS088507Soil (2014)USA, IowaMLST(TH, H, P, clpc, dinb, gyrb, mdh, muts, pyca1, rpob, yhfl)
B.thuringiensis AFS033597Soil (2014)USA, North CarolinaMLST(H, K, clpc, dinb, gdpd, glpf, ilvd, panc, purh, pyca2, tpi, yhfl)
B.cereus FSLK6-0043Dairy products, Laboratory Heat Treated Raw Milk (2012)USA, New YorkMLST(H, clpc, gdpd, glpf, gmk, gyrb, mbl, mdh, panc, purf, purh, pyca1, pyca2, rpob, tpi, yhfl)
B.thuringiensis Bt18247Animal, nematode (Caenorhabditis elegans) MLST(TH, P, clpc, dinb, ftsa, gyrb, mdh, muts, purf, pyca1, recf, rpob, succ)
B.thuringiensis AFS099506Plant, Corn root (2014)USA, IowaMLST(H, K, clpc, gdpd, glpf, gmk, ilvd, panc, purh, pyca2, tpi)
B.thuringiensis AFS096410Plant, Corn leaf (2014)USA, IllinoisMLST(CS, ccpa, ftsa, glpf, glpt, gyrb, ilvd, mbl, pta, purh, pyca1, pyca2, recf, rpob, succ, tpi)
B.thuringiensis AFS052034Plant, Soybean leaf (2014)USA, MinnesotaMLST(K, adk, ccpa, clpc, ftsa, gdpd, glpf, glpt, gmk, ilvd, purf, pyca2, recf, succ, tpi, yhfl)
B.thuringiensis AFS084862Plant, Corn core (2014)USA, IllinoisMLST(H, clpc, dinb, gdpd, glpf, gmk, gyrb, mbl, mdh, purh, pyca1, pyca2, rpob, tpi)
B.thuringiensis AFS056597Soil (2014)USA, North CarolinaMLST(H, dinb, glpf, gmk, gyrb, mbl, mdh, pta, purh, pyca1, pyca2, rpob, yhfl)
B.thuringiensis AFS027250Plant, Corn leaf (2014)USA, IllinoisMLST(K, adk, ccpa, clpc, dinb, ftsa, glpt, ilvd, panc, purh, pyca2, recf)
B.cereus NVH1230/88Food, oriental stew (1988) [strain responsible for a diarrheal food poisoning outbreak]NorwayAFLP2 MLST(P)
B.c_group KW26[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.c_group KW3[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.cereus SB460Human, blood, drug user (2005) [human septicemia]USA, New YorkMLST(P)
B.c_group KW1[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.c_group MCCC1A00361Other, sediments (2006)South China SeaMLST(P)
B.cereus HF54Food (2015)Germany, BerlinMLST(P)
B.cereus S6584Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus HF51Food (2015)Germany, BerlinMLST(P)
B.cereus HF10Food (2014)Germany, BerlinMLST(P)
B.cereus c1617Animal, mouse faeces/stoolsUSA, North CarolinaMLST(P)
B.cereus 2004727352Human, cutaneous lesion (2004) [human wound infection; from an outbreak of cutaneous infection in military cadets; same outbreak as isolates 2004727353 and 2004727354]USA, GeorgiaMLST(P)
B.cereus S6595Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus Bc_BY_D1-1Soil (2015)Belarus, GomelMLST(P)
B.thuringiensis FN31Other, Sediments (2002)Pacific OceanMLST(P)
B.c_group MCCC1A00841Other, sediments (2005)Pacific OceanMLST(P)
B.cereus S6569Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6590Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus LFB1687Animal, Insect, Culicidae (Mosquitoes) (2008)Brazil, Sao PauloMLST(TH)
B.c_group FSLR5-0184Dairy products, milk products (2006)USAMLST(P)
B.cereus S6636Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6624Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus 2004727354Human, cutaneous lesion (2004) [human wound infection; from an outbreak of cutaneous infection in military cadets; same outbreak as isolates 2004727352 and 2004727353]USA, GeorgiaMLST(P)
B.c_group KW7[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.thuringiensis K14_5846(2014)Korea (South)MLST(P)
B.cereus 2004727353Human, cutaneous lesion (2004) [human wound infection; from an outbreak of cutaneous infection in military cadets; same outbreak as isolates 2004727352 and 2004727354]USA, GeorgiaMLST(P)

3 isolate(s) sharing typing data in supercluster 2

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.c_group VDM034SoilSpainMLST(TH, H, P, clpc, gdpd, gyrb, mbl, mdh, purf, pyca1, rpob, yhfl)
B.c_group VDM062SoilUK, ScotlandMLST(TH, H, P, clpc, gdpd, gyrb, mbl, mdh, purf, pyca1, rpob, yhfl)
B.thuringiensis PLmBPN01Soil (2012)PolandMLST(P)

288 isolate(s) sharing typing data in supercluster 3

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.toyonensis AFS058160Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS099364Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.c_group BAG4X2-1SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.c_group HuB2-9SoilBelgiumMLST(TH, H, K, CS, P)
B.toyonensis AFS050593Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus FSLH8-0488Other, Water from hose connected to pond (2006)USA, New YorkMLST(TH, H, K, CS, P)
B.toyonensis AFS014939Plant, Grass core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS028444Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS081127Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS091569Plant, Soybean root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS019346Plant, Soybean leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS083298Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis ZBG4Soil (2014)France, ZellenbergMLST(TH, H, K, CS, P)
B.toyonensis AFS036089Plant, Soybean root (2014)USA, MissouriMLST(TH, H, K, CS, P)
B.toyonensis AFS086269Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS027862Other, excrement (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS033588Plant, Corn leaf (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS064666Plant, Weed leaf (2014)USA, OhioMLST(TH, H, K, CS, P)
B.toyonensis AFS067541Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS091045Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS089729Soil (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.toyonensis AFS084980Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.c_group HuB5-5SoilBelgiumMLST(TH, H, K, CS, P)
B.toyonensis AFS094862Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS006079Plant, Soybean root (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS027629Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS033493Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS089650Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS051123Plant, Wheat plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.toyonensis AFS067067Plant, Corn (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis BCT-7112Soil (1966) [active ingredient of the feed additive preparation Toyocerin]Japan, Shizuoka Prefecture, IzuMLST(TH, H, K, CS, P)
B.toyonensis AFS048987Plant, Weed leaf (2014)USA, OhioMLST(TH, H, K, CS, P)
B.toyonensis AFS031162Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.c_group BAG2O-2SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.toyonensis AFS080033Plant, Soybean leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS001450Plant, Corn (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS089449Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS055530Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS001368Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS028541Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS042148Plant, Corn grainbin dust (2013)USA, IowaMLST(TH, H, K, CS, P)
B.cereus FSLH8-0482Soil (2006) [soil in areas adjacent to barns]USA, New YorkMLST(TH, H, K, CS, P)
B.toyonensis AFS009314Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS045461Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS026256Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS001294Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus IP5832Other, commercial probiotic MLST(TH, H, K, CS, P)
B.c_group BAG5O-1SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.cereus 105NeOther, Water (2011)Switzerland, Neuchatel, Ponts-de-MartelMLST(TH, H, K, CS, P)
B.toyonensis AFS065389Plant, Corn root (2014)USA, IndianaMLST(TH, H, K, CS, P)
B.toyonensis AFS033477Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.toyonensis AFS072190Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS086995Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS035117Plant, Grass core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS097554Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS095380(2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS084149Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS051073Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.toyonensis AFS050801Soil (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.toyonensis AFS093065Plant, Soybean root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS097065Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus Rock4-18SoilUSA, Maryland, RockvilleMLST(TH, H, K, CS, P)
B.toyonensis AFS060522Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS023984Plant, Soybean root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS031495Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS066620Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS091268Plant, Corn root (2014)USA, OhioMLST(TH, H, K, CS, P)
B.toyonensis AFS054329Plant, Corn leaf (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS052350Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.c_group VD148SoilUK, ScotlandMLST(TH, H, K, CS, P)
B.toyonensis AFS052650Animal, Insect, Japanese beetle (2013)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS040610Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.toyonensis AFS018451Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis GOE7#1Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(TH, H, K, CS, P)
B.toyonensis AFS068057Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.c_group BAG6O-1SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.toyonensis AFS000445Plant, Weed plant (2014)USA, IndianaMLST(TH, H, K, CS, P)
B.toyonensis AFS039823Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.toyonensis AFS095804Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS027027Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis GOE5#1Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(TH, H, K, CS, P)
B.toyonensis AFS055990Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS081174Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS039264Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.c_group BAG1O-2SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.cereus NVH141/1/01(2001) [diarrheal food poisoning outbreak]NorwayMLST(TH, H, K, CS, P)
B.toyonensis AFS086630Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.toyonensis AFS072832Plant, Soybean root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS045312Soil (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.toyonensis AFS043269Plant, Corn leaf (2014)USA, OhioMLST(TH, H, K, CS, P)
B.toyonensis AFS055090Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.toyonensis AFS089607Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS097295Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS060293Other, excrement (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS049517Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS095385Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS072123Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.toyonensis AFS061705Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.c_group HuA2-3SoilBelgiumMLST(TH, H, K, CS, P)
B.toyonensis AFS023559Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.toyonensis AFS009906Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS074325Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS022121Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS096476Plant, Soybean root (2013)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS006579Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.toyonensis AFS092321Plant, tree leaf (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.toyonensis AFS081381Plant, Soybean root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS017381Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS000087Soil (2013)USA, North CarolinaMLST(TH, H, K, CS, P)
B.toyonensis AFS059543Plant, Corn (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS027674Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS067879Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS070094Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS099561Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS055514Plant, Weed plant (2014)USA, IndianaMLST(TH, H, K, CS, P)
B.toyonensis AFS041274Plant, Soybean leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS043516Plant, Weed leaf (2014)USA, IndianaMLST(TH, H, K, CS, P)
B.toyonensis AFS045990Plant, Corn (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS057443Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS098702Plant, Soybean root (2013)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS016553Plant, Weed plant (2014)USA, IndianaMLST(TH, H, K, CS, P)
B.toyonensis AFS049391Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS004252Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS036256Plant, Soybean root (2014)USA, MissouriMLST(TH, H, K, CS, P)
B.c_group VD214Other, WaterUK, ScotlandMLST(TH, H, K, CS, P)
B.toyonensis AFS024499Plant, Wheat plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.toyonensis AFS078111Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS007279Plant, Weed plant (2014)USA, IndianaMLST(TH, H, K, CS, P)
B.toyonensis AFS003709Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus Rock3-29SoilUSA, Maryland, RockvilleMLST(TH, H, K, CS, P)
B.toyonensis AFS099300Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.toyonensis AFS082630Plant, Soybean leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS051208Plant, Weed plant (2014)USA, IndianaMLST(TH, H, K, CS, P)
B.toyonensis AFS075404Plant, Soybean root (2013)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS026201Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS093377Plant, Soybean root (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis BAC3151Plant, bean (Phaseolus vulgaris) leaves (2007)Brazil, Minas Gerais, CoimbraMLST(TH, H, K, CS, P)
B.cereus Rock1-3SoilUSA, Maryland, RockvilleMLST(TH, H, K, CS, P)
B.toyonensis AFS081053Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS083176Plant, Soybean root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS020717Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS088186Plant, Soybean root (2013)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS062910Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS084242Animal, Insect, Japanese beetle (2013)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS058541Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.toyonensis AFS073024Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS027646Plant, Corn leaf (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS013932Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.toyonensis AFS016448Plant, Weed plant (2014)USA, IndianaMLST(TH, H, CS, P, gyrb, mbl, mdh, muts, rpob)
B.toyonensis AFS034981Plant, Corn core (2014)USA, IllinoisMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.toyonensis AFS017687Soil (2014)USA, IowaMLST(H, K, CS, glpf, gmk, ilvd, purh, pyca2, tpi)
B.toyonensis AFS070247Plant, Weed leaf (2014)USA, IndianaMLST(TH, K, CS, P, ftsa, recf, succ)
B.toyonensis AFS070615Plant, Weed leaf (2014)USA, IndianaMLST(TH, K, CS, P, ftsa, pyre, succ)
B.toyonensis AFS056055Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, P, clpc, dinb, purf, yhfl)
B.toyonensis AFS002053Plant, Corn (2014)USA, MinnesotaMLST(TH, H, CS, P, gyrb, mbl, muts, pyca1, rpob)
B.toyonensis AFS017221Plant, Soybean core (2014)USA, IowaMLST(H, K, P, clpc, dinb, gdpd, purf, yhfl)
B.toyonensis AFS068780Other, excrement (2014)USA, IowaMLST(TH, H, CS, P, mbl, mdh, muts, pyca1, rpob)
B.c_group HuB4-10SoilBelgiumMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.toyonensis AFS020011Plant, Grass core (2014)USA, IowaMLST(TH, H, K, CS, gmk, ilvd, purh)
B.toyonensis AFS028618Plant, Corn leaf (2014)USA, IllinoisMLST(H, K, CS, glpf, gmk, ilvd, purh, pyca2, tpi)
B.toyonensis AFS094802Plant, Soybean core (2014)USA, IowaMLST(K, CS, P, adk, ftsa, glpt, pyre, recf, succ)
B.toyonensis AFS042818(2014)USA, North CarolinaMLST(TH, H, CS, P, gyrb, mbl, mdh, muts, rpob)
B.toyonensis AFS041177Plant, Weed leaf (2014)USA, OhioMLST(TH, K, CS, P, ftsa, recf, succ)
B.toyonensis AFS014496Soil (2014)USA, North CarolinaMLST(TH, H, K, P, clpc, dinb, purf, yhfl)
B.toyonensis AFS089688Plant, Grass core (2014)USA, IowaMLST(K, CS, P, adk, ftsa, glpt, pyre, recf, succ)
B.toyonensis AFS062328Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, gmk, ilvd, purh)
B.toyonensis AFS083349Soil (2014)USA, North CarolinaMLST(TH, H, K, P, dinb, gdpd, purf, yhfl)
B.toyonensis AFS026137Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, gmk, purh, tpi)
B.toyonensis AFS027958Plant, Grass core (2014)USA, IowaMLST(TH, H, K, CS, gmk, ilvd, purh)
B.toyonensis AFS064582Plant, Soybean leaf (2014)USA, MinnesotaMLST(H, CS, glpf, gmk, gyrb, ilvd, mdh, muts, purh, pyca1, pyca2, rpob, tpi)
B.toyonensis AFS009420Plant, Soybean leaf (2014)USA, MinnesotaMLST(K, CS, P, ccpa, ftsa, pyre, recf, succ)
B.toyonensis AFS028249Plant, Soybean core (2014)USA, IowaMLST(H, P, clpc, dinb, gdpd, gyrb, mdh, muts, purf, pyca1, rpob, yhfl)
B.toyonensis AFS003846Soil (2014)USA, IowaMLST(TH, H, CS, P, gyrb, mdh, muts, rpob)
B.c_group VD131SoilMartiniqueMLST(TH, H, K, P, dinb, gdpd, purf)
B.toyonensis AFS065951Plant, Corn core (2014)USA, IllinoisMLST(TH, H, CS, P, mdh, muts, pyca1, rpob)
B.toyonensis SJ-S4HumanUSA, Tennessee, MemphisMLST(TH, P, clpc, dinb, gdpd, gyrb, mdh, muts, pyca1, pyre, recf, rpob, succ, yhfl)
B.toyonensis AFS083448Plant, Soybean leaf (2014)USA, MinnesotaMLST(H, K, clpc, dinb, gdpd, glpf, gmk, ilvd, pta, purf, purh, pyca2)
B.toyonensis AFS082731Plant, Weed plant (2014)USA, IndianaMLST(CS, adk, ccpa, ftsa, glpf, glpt, gmk, gyrb, ilvd, mbl, mdh, muts, purh, pyca2, pyre, rpob, succ)
B.toyonensis AFS090953(2014)USA, North CarolinaMLST(P, adk, ccpa, dinb, ftsa, gdpd, gyrb, mdh, muts, panc, purf, pyca1, pyre, recf, succ, yhfl)
B.toyonensis VU-DES13Animal, Springtail/Collembola (Folsomia candida) midgutNetherlands, AmsterdamMLST(TH, CS, ftsa, gyrb, ilvd, muts, purh, pyca1, pyre, succ, tpi)
B.toyonensis AFS044634Plant, Soybean root (2013)USA, MissouriMLST(H, clpc, dinb, glpf, gmk, gyrb, mbl, purf, purh, pyca1, pyca2, rpob, tpi)
B.toyonensis AFS021349Plant, Corn core (2013)USA, IllinoisMLST(K, clpc, dinb, ftsa, glpf, glpt, gmk, purf, pyca2, pyre, tpi)
B.c_group AH1247Soil (1997) [from the site of an anthrax outbreak]France, Pyrenees mountainsMLST(TH, H)
B.cereus S6607Soil (2007)USA, Maryland, RockvilleMLST(P)
B.c_group B4s1Soil (2002)UK, England, BerkshireMLST(P)
B.cereus F4794Human, blood (1982) [pneumonia]USA, MichiganMLST(P)
B.c_group B4m4Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group A3s11Soil (2002)UK, England, BerkshireMLST(P)
B.c_group AH1312Human, bloodGermany, KarlsruheMLST(TH)
B.c_group AH1311Other, probioticGermany, KarlsruheMLST(TH)
B.c_group AR10-1Soil (2012)ArgentinaMLST(P)
B.c_group C3s1Soil (2002)UK, England, BerkshireMLST(P)
B.c_group C3s10Soil (2002)UK, England, BerkshireMLST(P)
B.c_group C3m2Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.cereus S6641Soil (2007)USA, Maryland, RockvilleMLST(P)
B.c_group B4s3Soil (2002)UK, England, BerkshireMLST(P)
B.c_group AR13-1Soil (2012)ArgentinaMLST(P)
B.c_group E2s8Soil (2002)UK, England, BerkshireMLST(P)
B.cereus NC390Human, faeces/stools (1982)JapanMLST(P)
B.c_group A4s9Soil (2002)UK, England, BerkshireMLST(P)
B.cereus S6571Soil (2007)USA, Maryland, RockvilleMLST(P)
B.c_group E2o6Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group B4o11Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3s8Soil (2002)UK, England, BerkshireMLST(P)
B.c_group B4g1Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group A3s7Soil (2002)UK, England, BerkshireMLST(P)
B.cereus S6559Soil (2007)USA, Maryland, RockvilleMLST(P)
B.c_group C3o41Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.cereus B06_023Human, woundFranceMLST(TH)
B.c_group A3s6Soil (2002)UK, England, BerkshireMLST(P)
B.cereus S6635Soil (2007)USA, Maryland, RockvilleMLST(P)
B.c_group A3s9Soil (2002)UK, England, BerkshireMLST(P)
B.c_group B4g7Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3i6Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.cereus S6585Soil (2007)USA, Maryland, RockvilleMLST(P)
B.c_group C3o5Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3o40Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.cereus S6604Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus LB_063Soil (2006)USA, MarylandMLST(P)
B.c_group E5i3Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3s6Soil (2002)UK, England, BerkshireMLST(P)
B.cereus BGSC6A8Other, used in commercial probiotic BACTISUBTIL MLST(P)
B.cereus BFDA96173(2007)Taiwan, Hsinchu cityMLST(P)
B.cereus 2004721594Other, hair clippers (2004)USA, GeorgiaMLST(P)
B.c_group E2o8Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group B4g10Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group A4s2Soil (2002)UK, England, BerkshireMLST(P)
B.c_group PL9Soil MLST(P)
B.cereus S6554Soil (2007)USA, Maryland, RockvilleMLST(P)
B.c_group E2s6Soil (2002)UK, England, BerkshireMLST(P)
B.c_group C3s2Soil (2002)UK, England, BerkshireMLST(P)
B.cereus XJ12BC97Food (2012)China, Uygur RegionMLST(P)
B.c_group C3o14Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.cereus S6606Soil (2007)USA, Maryland, RockvilleMLST(P)
B.c_group E2s1Soil (2002)UK, England, BerkshireMLST(P)
B.c_group 3466-8.1Soil [non-pathogenic; Pasteur Institute]France, ParisMLST(P)
B.c_group E2o10Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group E2o1Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group E2o7Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group A4s10Soil (2002)UK, England, BerkshireMLST(P)
B.c_group B4s5Soil (2002)UK, England, BerkshireMLST(P)
B.c_group C3g3Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.cereus 2004721597Other, hair clippers (2004)USA, GeorgiaMLST(P)
B.c_group KW15[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.c_group C3o19Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3s3Soil (2002)UK, England, BerkshireMLST(P)
B.thuringiensis PLBB15/2Soil (2012)PolandMLST(P)
B.c_group E2m2Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.cereus S6586Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6613Soil (2007)USA, Maryland, RockvilleMLST(P)
B.c_group C3m4Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group AH1308Human, faeces/stoolsGermany, KarlsruheMLST(TH)
B.cereus S6609Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus B03_003Animal, cattle (cow)FranceMLST(TH)
B.cereus S6579Soil (2007)USA, Maryland, RockvilleMLST(P)
B.c_group C3s4Soil (2002)UK, England, BerkshireMLST(P)
B.c_group KW28[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.c_group PL14Soil MLST(P)
B.c_group B4s2Soil (2002)UK, England, BerkshireMLST(P)
B.c_group KW20[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.c_group B4g4Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group PEYR9Soil [non-pathogenic; Pasteur Institute]France, ParisMLST(P)
B.c_group E2s4Soil (2002)UK, England, BerkshireMLST(P)
B.cereus R_3238/03Human, blood (2003) [human septicaemia]UK, EnglandMLST(P)
B.c_group FSLM8-0214Dairy products, milk products (2012)USAMLST(P)
B.c_group C3i8Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.cereus BGSC6A7#1Other, purified from commercial probiotic BIOSUBTYL DALAT, manufactured in Vietnam [sequences conflicting with isolate BGSC6A7#2] MLST(P)
B.cereus S6581Soil (2007)USA, Maryland, RockvilleMLST(P)
B.c_group E2o2Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3i2Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group E2i6Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3g1Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.cereus B03_002Animal, cattle (cow)FranceMLST(TH)
B.c_group A4s5Soil (2002)UK, England, BerkshireMLST(P)
B.c_group E2o4Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group A3s2Soil (2002)UK, England, BerkshireMLST(P)
B.cereus 9305Human, wound (2005)UK, England, TorquayMLST(P)
B.thuringiensis SABCG7Food (2017)AustriaMLST(P)
B.c_group B4o5Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group E2i1Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3i3Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3g5Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.cereus S6632Soil (2007)USA, Maryland, RockvilleMLST(P)
B.thuringiensis PLBPN44/2Soil (2012)PolandMLST(P)
B.c_group PL10Soil MLST(P)
B.c_group E2i4Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group B4g5Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group B4g2Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)

186 isolate(s) sharing typing data in supercluster 4

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StrainSourceLocationShared Typing Data
B.thuringiensis HD29Animal, Insect, Siberian moth (Dendrolimus sibiricus)Czechoslovakia or USSRAFLP2 MLST(TH, H, K, CS, P)
B.thuringiensis HD11Animal, Insect, Oriental Tobacco Budworm/Cape Gooseberry Budworm (Heliothis assulta/Helicoverpa assulta)JapanAFLP2 MLST(TH, H, K, CS, P)
B.thuringiensis BGSC4J1Animal, Insect, Oriental Tobacco Budworm/Cape Gooseberry Budworm (Heliothis assulta/Helicoverpa assulta)JapanMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4L3[Wild type isolate] MLST(TH, H, K, CS, P)
B.thuringiensis AFS018409Plant, Oats (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis HD5  MLST(TH, H, K, CS, P)
B.cereus MOD1Bc21Plant, Natural Sesame Seeds (2015)USA, MarylandMLST(TH, H, K, CS, P)
B.c_group ISP2954Food MLST(TH, H, K, CS, P)
B.thuringiensis AFS061780Plant, Oats (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis HD73Animal, Insect [two complete genomes sequenced for this strain with identical MLST sequences] MLST(TH, H, K, CS, P)
B.cereus B4158Food, vegetables and (fermented) vegetable products (2012)NetherlandsMLST(TH, H, K, CS, P)
B.thuringiensis HD133Animal, Insect, Indian meal moth (Plodia interpunctella) [two complete genomes sequenced for this strain with identical MLST sequences]UK, EnglandMLST(TH, H, K, CS, P)
B.thuringiensis Btm27Animal, Insect, Citrus mealybug (Planococcus citri) (2010)EgyptMLST(TH, H, K, CS, P)
B.thuringiensis AK47Soil (2010)India, OdishaMLST(TH, H, K, CS, P)
B.thuringiensis T07153  MLST(TH, H, K, CS, P)
B.thuringiensis I13  MLST(TH, H, K, CS, P)
B.cereus AFS098022Plant, Corn grainbin dust (2013)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4AE1Animal, Insect, litter of silkworm (Bombyx mori)JapanMLST(TH, H, K, CS, P)
B.cereus RIVMBC934(2002)NetherlandsMLST(TH, H, K, CS, P)
B.thuringiensis AFS031473Plant, Oats (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis T07019  MLST(TH, H, K, CS, P)
B.thuringiensis BP865Plant, phylloplane (1993)Korea (South)MLST(TH, H, K, CS, P)
B.thuringiensis T07128  MLST(TH, H, K, CS, P)
B.thuringiensis BR37Plant, stored grains (2009)Brazil, SertanopolisMLST(TH, H, K, CS, P)
B.thuringiensis G03Soil (2003)China, Hebei, BaodingMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4J5Animal, Insect, Indian meal moth (Plodia interpunctella)UK, EnglandMLST(TH, H, K, CS, P)
B.thuringiensis AFS034084Plant, Wheat (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis 7.1oAnimal, Insect, silkworm (Bombyx mori) (2013)UKMLST(TH, H, K, CS, P)
B.cereus 6/27/SHuman, faeces/stools [human diarrhea] MLST(TH, H, K, CS, P)
B.cereus MOD1Bc231Food, food product (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus AFS045441(2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis BMB3201Soil (2015)China, Hubei ProvinceMLST(TH, H, K, CS, P)
B.thuringiensis Bc601(2012)China, TianjinMLST(TH, H, K, CS, P)
B.c_group HuB13-1SoilBelgiumMLST(TH, H, K, CS, P)
B.cereus MOD1Bc137Food, Dietary Supplements (2015)USA, MarylandMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4G1Animal, Insect, Greater Wax Moth/Honeycomb Moth (Galleria mellonella) (1958)USSRMLST(TH, H, K, CS, P)
B.thuringiensis NBIN-866SoilChina, Hubei ProvinceMLST(TH, H, K, CS, P)
B.thuringiensis 1126_1Soil (2017)China, Hebei ProvinceMLST(TH, H, K, CS, P)
B.cereus MOD1Bc30Food, Dietary Supplements (2015)USA, MarylandMLST(TH, H, K, CS, P)
B.thuringiensis T07005  MLST(TH, H, K, CS, P)
B.cereus AFS004414Plant, Oats plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis T03a001Animal, Insect, Mediterranean flour moth/mill moth (Ephestia kuhniella/Anagasta kuehniella) (1962)FranceMLST(TH, H, K, CS, P)
B.thuringiensis T07148  MLST(TH, H, K, CS, P)
B.thuringiensis T07183  MLST(TH, H, K, CS, P)
B.thuringiensis BGSC4J2Animal, Insect, Indian meal moth (Plodia interpunctella)UK, EnglandMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4T1Soil (1976)ChinaMLST(TH, H, K, CS, P)
B.thuringiensis Leapi01Animal, Insect, Loreyi Leafworm/Cosmopolitan (Mythimna loreyi/Leucania loreyi) dead larvaSpainMLST(TH, H, K, CS, P)
B.c_group BMG1.7  MLST(TH, H, K, CS, P)
B.thuringiensis T07030  MLST(TH, H, K, CS, P)
B.thuringiensis YWC2-8Soil (2007)China, Hailuo Glacier virgin forest, Sichuan basinMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4J3Animal, Insect, Indian meal moth (Plodia interpunctella) [two complete genomes sequenced for this strain with identical MLST sequences]UK, EnglandMLST(TH, H, K, CS, P)
B.thuringiensis AFS043930Plant, Oats (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4X1[Wild type isolate] MLST(TH, H, K, CS, P)
B.thuringiensis BGSC4G4Animal, Insect, Indian meal moth (Plodia interpunctella)UK, EnglandMLST(TH, H, K, CS, P)
B.thuringiensis YC-10Plant, tobacco roots (2010) [two complete genomes sequenced for this strain with identical MLST sequences]China, Hunan ProvinceMLST(TH, H, K, CS, P)
B.thuringiensis Hu4-2Other, dust sample from maize grain siloSpainMLST(TH, H, K, CS, P)
B.thuringiensis BR145Soil, soybean field (2010)Brazil, Parana, Bela Vista do ParaisoMLST(TH, H, K, CS, P)
B.cereus MOD1Bc235Food, food product (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.c_group BAG3X2-2SoilUSA, Massachusetts, BostonMLST(TH, H, K, P, clpc, gdpd, purf, yhfl)
B.thuringiensis T07033Animal, Insect, Oriental Tobacco Budworm/Cape Gooseberry Budworm (Heliothis assulta/Helicoverpa assulta) (1975)JapanAFLP2 MLST(P)
B.thuringiensis BGSC4I5 CanadaAFLP2 MLST(P)
B.thuringiensis BGSC4D14[Wild type isolate] MLST(P)
B.thuringiensis T07180Animal, Insect, Lepidoptera (1992)SpainMLST(P)
B.thuringiensis IBL533Soil (1988)VietnamMLST(P)
B.thuringiensis T05033(1975)USAMLST(P)
B.c_group C3o27Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3o37Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis BGSC4G2 USAMLST(P)
B.thuringiensis BGSC4G3[Wild type isolate] MLST(P)
B.c_group 6_2_YPlant, leaves (2005)UK, England, DorsetMLST(P)
B.thuringiensis BGSC4E7(1991) [sequences conflicting with isolate T04236]IndonesiaMLST(P)
B.c_group C3o10Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis T03a287(1988)KenyaMLST(P)
B.thuringiensis T03a361(1990)AustraliaMLST(P)
B.c_group C3o11Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis IBL966Soil (1984)NepalMLST(P)
B.c_group C3o24Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis IBL661Soil (1988)USA, PennsylvaniaMLST(P)
B.c_group C3o15Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group PL52SoilPolandMLST(P)
B.thuringiensis HD136#2Animal, Insect, rice moth (Corcyra cephalonica) [sequences conflicting with isolate HD136#1]UK, EnglandMLST(P)
B.c_group K14_5759(2014)Korea (South)MLST(P)
B.c_group C3o2Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group D10-18.A.iSoil (2006)UKMLST(P)
B.thuringiensis T04b060Animal, Insect, Almond moth (Ephestia cautella/Cadra cautella) (1987)IraqMLST(P)
B.thuringiensis T05114Other, Astiniae (1985)FranceMLST(P)
B.thuringiensis T03a075Animal, Insect, Small Cabbage White butterfly/Imported Cabbage Worm (Pieris rapae) (1976)IraqMLST(P)
B.thuringiensis YBT-1520  MLST(P)
B.thuringiensis BGSC4D15[Wild type isolate] MLST(P)
B.thuringiensis BGSC4XX5  MLST(P)
B.c_group C3o13Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3o20Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis BGSC4D17Animal, Insect, Cabbage Looper moth (Trichoplusia ni)USA, TexasMLST(P)
B.thuringiensis BGSC4F4[Wild type isolate] MLST(P)
B.c_group C3o25Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.cereus S58Animal, swan faeces/stoolsUSA, MarylandMLST(P)
B.cereus BFDA95191(2006)Taiwan, Taipei countyMLST(P)
B.thuringiensis ABTS351(2008)USAMLST(P)
B.cereus S57Soil, mudUSA, MarylandMLST(P)
B.c_group C3o29Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3o28Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis IBL84Soil (1987)USA, WisconsinMLST(P)
B.c_group C3o22Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.cereus BC_26Food, egg product (2006)Italy (Southern)MLST(P)
B.thuringiensis IBL441Soil (1988)ArgentinaMLST(P)
B.c_group C3o12Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis BGSC4F2Animal, Insect, Almond moth (Ephestia cautella/Cadra cautella)KenyaMLST(P)
B.thuringiensis T04b054(1986)IraqMLST(P)
B.thuringiensis IBL563Soil (1988)USA, North CarolinaMLST(P)
B.c_group C3o4Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis T03a172(1982)PakistanMLST(P)
B.c_group E5s9Soil (2002)UK, England, BerkshireMLST(P)
B.thuringiensis IBL1288Soil (1988)AzoresMLST(P)
B.thuringiensis IBL3757Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL159Soil (1987)USA, New MexicoMLST(P)
B.thuringiensis IBL10012[bears Photorhabdus/Yersinia-like toxin genes] MLST(P)
B.c_group E2o20Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3o9Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis BGSC4D5[Wild type isolate] MLST(P)
B.thuringiensis T04b012Animal, dead insect, Greater Wax Moth/Honeycomb Moth (Galleria mellonella) (1974)BulgariaMLST(P)
B.c_group C3o42Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis BGSC4D19Animal, Insect, dried fruit Beetle (Carpophilus hemipterus)UK, EnglandMLST(P)
B.thuringiensis ABTS2423(2008)USAMLST(P)
B.c_group DiPelOther, DiPel insecticide MLST(P)
B.thuringiensis 248-S-1Plant, leaves of clover (Trifolium hybridum) (2004)UKMLST(P)
B.c_group C3o35Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis IBL3782Soil (2009)USA, MarylandMLST(P)
B.cereus S59Soil, mudUSA, MarylandMLST(P)
B.c_group C3o18Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group E5g1Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3o17Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3o38Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis IBL743Animal, Insect, gut of an Aedes aeygpti mosquito larva (1984)USA, MarylandMLST(P)
B.cereus BGSC6A75(1996) [sequences conflicting with isolate NC1235]JapanMLST(P)
B.cereus B06_035HumanFranceMLST(TH)
B.c_group C3o21Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis BGSC4I2Animal, Insect, Raisin moth (Cadra figulilella)USAMLST(P)
B.thuringiensis ABTS2279(2008)USAMLST(P)
B.c_group C3o8Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis IBL1268Soil (1988)ArgentinaMLST(P)
B.thuringiensis T04b001(1962)KenyaMLST(P)
B.c_group C3o32Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis 164-S-1Plant, leaves of clover (Trifolium hybridum) (2004)UKMLST(P)
B.thuringiensis T05005(1964)USAMLST(P)
B.thuringiensis BGSC4D18Animal, Insect, Cabbage Looper moth (Trichoplusia ni)USAMLST(P)
B.thuringiensis BGSC4I1Animal, Insect, Indian meal moth (Plodia interpunctella)CanadaMLST(P)
B.thuringiensis IBL1247Soil (1987)Korea (South)MLST(P)
B.thuringiensis BGSC4D16[Wild type isolate] MLST(P)
B.c_group C3o3Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3o16Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis T04b073Soil (1993)ChileMLST(P)
B.thuringiensis IBL999Soil (1984)USA, MarylandMLST(P)
B.thuringiensis IBL389Soil (1986)USA, Washington D.C.MLST(P)
B.thuringiensis IBL3777Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL1252Soil (1987)Korea (South)MLST(P)
B.thuringiensis IBL1254Soil (1987)Korea (South)MLST(P)
B.c_group E5m5Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3o34Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis T07058Animal, Insect, spiny bollworm/Egyptian stemborer (Earias insulana) (1983)FranceMLST(P)
B.thuringiensis IBL88Soil (1987)USA, North DakotaMLST(P)
B.c_group C3o6Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis BGSC4G6Other, Reisolation of strain BGSC4G1 MLST(P)
B.c_group C3o36Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis IBL749Soil (1984)NepalMLST(P)
B.thuringiensis Dt7.1.oPlant, leaves of wild mustard (Brassica oleracea) (2005)UK, England, DorsetMLST(P)
B.cereus BGSC6A78Human, wound infection (2004) [sequences conflicting with isolate 211250.S]UK, ScotlandMLST(P)
B.thuringiensis HD185  AFLP2
B.thuringiensis HD10Animal, Insect, Indian meal moth (Plodia interpunctella)CanadaAFLP2
B.thuringiensis HD67  AFLP2
B.thuringiensis HD238  AFLP2
B.thuringiensis HD150  AFLP2
B.thuringiensis HD157  AFLP2
B.thuringiensis HD192  AFLP2
B.thuringiensis HD594  AFLP2
B.thuringiensis HD154  AFLP2
B.thuringiensis HD196  AFLP2
B.thuringiensis HD525  AFLP2
B.thuringiensis HD780  AFLP2
B.thuringiensis HD335  AFLP2
B.thuringiensis HD167  AFLP2
B.thuringiensis HD211  AFLP2
B.thuringiensis HD573  AFLP2
B.thuringiensis HD153  AFLP2
B.thuringiensis HD304  AFLP2
B.thuringiensis HD982  AFLP2
B.thuringiensis HD918  AFLP2

11 isolate(s) sharing typing data in supercluster 5

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StrainSourceLocationShared Typing Data
B.c_group HD1#4Animal, Insect, diseased larvae of Pink Bollworm (Pectinophora gossypiella) (1970) [due to conflicting MLST data between isolates HD1#1, HD1#2, HD1#3, and HD1#5 it cannot be determined to which isolate the AFLP and MLEE data correspond to]USAAFLP2
B.thuringiensis HD934  AFLP2
B.thuringiensis HD315Animal, Insect, Cotton bollworm/corn earworm/tomato fruitworm (Heliothis zea/Helicoverpa zea) AFLP2
B.thuringiensis HD250Other, airborne contaminant from a plate culture of B.thuringiensis AFLP2
B.thuringiensis HD926  AFLP2
B.thuringiensis HD88Animal, Insect, Cabbage Looper moth (Trichoplusia ni)USA, TexasAFLP2
B.thuringiensis HD554  AFLP2
B.thuringiensis HD922  AFLP2
B.thuringiensis HD243[Wild type isolate] AFLP2
B.thuringiensis HD338  AFLP2
B.thuringiensis HD342Soil AFLP2

3 isolate(s) sharing typing data in supercluster 6

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StrainSourceLocationShared Typing Data
B.cereus BC_24Food, egg product (2006)Italy (Southern)MLST(P)
B.cereus BC_1Food, egg product (2006)Italy (Southern)MLST(P)
B.thuringiensis NRRLB-23152Animal, Insect, Isoptera (2013)UKMLST(P)

235 isolate(s) sharing typing data in supercluster 7

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StrainSourceLocationShared Typing Data
B.cereus AFS098742Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS043533Plant, Soybean root (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.cereus AFS001542Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS080281Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS094460Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS070662Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS070860Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS071044Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS023898Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus AFS061448Soil (2013)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS006012Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS081512Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS054163Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS024693Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS002848Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS095703Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS059198Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS034246Soil (2013)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS060105Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS089527Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS057596Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS000937Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS093334Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS097327Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS025457Plant, Corn leaf (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS096642Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS075467Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS046340Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS044547Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS073631Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS056399Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS052902Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS073833Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS014598Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS069947Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS068756Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS078211Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS011531Plant, Corn plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS024629Soil (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS035044Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS042006Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS046374Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS059650Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS029513Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS029617Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS070964Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS018668Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS068289Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS038688Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS092789Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS009778Soil (2013)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS084075Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS099621Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS093186Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS015939Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS048213Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS051540Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS054833Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS044880Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4AR1SoilChinaMLST(TH, H, K, CS, P)
B.c_group BAG5X12-1SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.cereus AFS048966Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS006065Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS079244Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS070891Plant, Corn (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS068806Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS043896Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS053336Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS074793Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS071863Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS017211Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS032567Plant, Corn (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS070947Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS057690Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS025653Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS044520Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS095498Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS067935Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS074515Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS057097Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS087654Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4AT1(1986)JapanMLST(TH, H, K, CS, P)
B.cereus AFS076104Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS009411Plant, Soybean root (2014)USA, MissouriMLST(TH, H, K, CS, P)
B.cereus AFS017032Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS051634Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS090123Plant, Corn plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS038126Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS017947Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS071440Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS013685Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS088317Soil (2013)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS025349Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS099737Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS048598Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS088704Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS008265Plant, Corn (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS045152Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS045348Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS038041Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS007693Soil (2013)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS008436Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS093925Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus AFS020204Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS048015Plant, tree leaf (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS075408Soil (2013)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS084233Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS001538Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS037512Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS080604Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS003289Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS068876Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS005998Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS045869Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS035954Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS004701Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS030663Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS030742Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS076729Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS018041Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS082261Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS023730Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS029679Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS025490Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS063234Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS080164Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS021466Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS030991Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS014136Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS001977Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS072104Soil (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS065770Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS042863Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS063645Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS080756Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS043359Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS066354Soil (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS042307Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS071251Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS018489Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS030860Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS057502Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS059960Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS053259Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS013997Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS048989Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS026537Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS002094Plant, Corn plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS009035Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS046747Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS039950Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS085871Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS075030Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS040986Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS062062Plant, Core Corn (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS084355Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS082683Plant, Soybean leaf (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus AFS013880Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS087824Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS095018Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.c_group BAG4X12-1SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.cereus AFS007743Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS010831Soil (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS000524Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS015717Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS076401Soil (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS038754Soil (2013)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS045887(2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS095548Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS093397Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS083123Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS081367Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS087793Plant, Weed plant (2014)USA, North CarolinaMLST(H, K, CS, glpf, gmk, ilvd, purh, pyca2, tpi)
B.cereus AFS081469Plant, Corn core (2014)USA, IllinoisMLST(H, K, CS, glpf, gmk, ilvd, purh, pyca2, tpi)
B.cereus AFS032444Plant, Corn core (2014)USA, North CarolinaMLST(H, K, CS, glpf, gmk, ilvd, pta, purh, tpi)
B.cereus AFS022169Plant, Corn core (2014)USA, North CarolinaMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.cereus AFS023720Soil (2013)USA, North CarolinaMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.cereus AFS017068Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.cereus AFS044532Plant, Corn root (2014)USA, IowaMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.cereus AFS028424Plant, Corn core (2014)USA, North CarolinaMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.cereus AFS071107Plant, Soybean root (2014)USA, IowaMLST(H, K, CS, glpf, gmk, ilvd, pta, purh, tpi)
B.cereus AFS001900Plant, Corn plant (2014)USA, North CarolinaMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.cereus AFS011058Plant, Corn plant (2014)USA, North CarolinaMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.cereus AFS037926Plant, Soybean core (2014)USA, IowaMLST(H, K, CS, glpf, gmk, ilvd, pta, purh, tpi)
B.cereus AFS088052Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, P, dinb, gdpd, purf, yhfl)
B.cereus AFS039692Soil (2013)USA, North CarolinaMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.cereus AFS089031Plant, Weed core (2014)USA, North CarolinaMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.cereus AFS036381Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, P, clpc, dinb, gdpd, purf)
B.cereus AFS043413Soil (2014)USA, New YorkMLST(TH, H, K, P, clpc, gdpd, purf, yhfl)
B.cereus AFS055648Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, P, clpc, dinb, gdpd, yhfl)
B.cereus AFS097377Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, gmk, ilvd, tpi)
B.cereus AFS086528Plant, core (2014)USA, North CarolinaMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.cereus AFS040106Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.cereus AFS073305Plant, Corn core (2014)USA, North CarolinaMLST(K, CS, P, adk, ftsa, glpt, pyre, recf, succ)
B.cereus AFS025120Plant, Soybean core (2014)USA, IowaMLST(TH, H, CS, P, gyrb, mbl, mdh, pyca1, rpob)
B.cereus SJ-S3HumanUSA, Tennessee, MemphisMLST(TH, K, CS, P, ftsa, pyre, recf)
B.cereus AFS052400Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, P, dinb, gdpd, purf, yhfl)
B.cereus AFS047280Plant, Corn core (2014)USA, North CarolinaMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.cereus AFS085674Plant, Corn core (2014)USA, North CarolinaMLST(TH, K, CS, P, ftsa, pyre, succ)
B.cereus AFS008413Soil (2014)USA, New YorkMLST(TH, H, K, CS, gmk, ilvd, tpi)
B.cereus AFS009093Plant, Corn core (2014)USA, North CarolinaMLST(H, K, CS, glpf, gmk, ilvd, purh, pyca2, tpi)
B.cereus AFS043837Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, P, dinb, gdpd, purf, yhfl)
B.cereus AFS097130Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, P, clpc, dinb, gdpd, yhfl)
B.cereus AFS029052Plant, Weed core (2014)USA, North CarolinaMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.cereus AFS016599Plant, Corn (2014)USA, North CarolinaMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.cereus AFS054178Plant, Corn core (2014)USA, North CarolinaMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf)
B.cereus Rock4-2SoilUSA, Maryland, RockvilleMLST(TH, CS, P, ftsa, mbl, mdh, muts, pyca1, pyre, rpob, succ)
B.cereus AFS011950Plant, Corn core (2014)USA, North CarolinaMLST(H, CS, glpf, gmk, gyrb, ilvd, mdh, muts, pta, purh, pyca1, rpob, tpi)
B.cereus AFS041497Plant, core (2014)USA, North CarolinaMLST(TH, K, CS, ftsa, ilvd, purh, recf, succ, tpi)
B.cereus AFS085606Soil (2014)USA, North CarolinaMLST(K, P, ccpa, clpc, ftsa, gdpd, glpt, panc, purf, pyre, recf, succ, yhfl)
B.cereus AFS056025Plant, Corn core (2014)USA, IllinoisMLST(H, K, clpc, dinb, gdpd, gmk, ilvd, panc, pta, purh, pyca2, tpi, yhfl)
B.cereus AFS028351Plant, core (2014)USA, North CarolinaMLST(CS, P, adk, ftsa, glpt, mdh, muts, pyca1, pyre, recf, rpob, succ)
B.thuringiensis BuibuiAnimal, Insect, Coleoptera (2013)UKMLST(TH, H, K, clpc, gdpd, ilvd, purf, purh, tpi)
B.thuringiensis KNU-07Plant, Ginseng (2015)Korea (South)MLST(H, K, clpc, dinb, gmk, ilvd, pta, purf, pyca2, tpi, yhfl)
B.cereus AFS088784Plant, Corn core (2014)USA, North CarolinaMLST(H, K, clpc, gdpd, gmk, panc, pta, purf, pyca2, tpi, yhfl)
B.thuringiensis BGSC4CA1 Korea (South)MLST(K, P, clpc, ftsa, glpt, panc, pyre, recf, succ, yhfl)
B.cereus AFS076596Soil (2014)USA, New YorkMLST(K, CS, ftsa, glpf, gmk, ilvd, pta, pyre, succ, tpi)
B.cereus AFS090431Plant, Oats plant (2014)USA, North CarolinaMLST(K, CS, adk, ccpa, gmk, pyca2, pyre, recf, succ, tpi)
B.cereus AFS061148Plant, Weed core (2014)USA, North CarolinaMLST(P, ccpa, gdpd, muts, purf, pyca1, pyre, recf, rpob, succ, yhfl)
B.cereus AFS010272Plant, Corn core (2014)USA, IllinoisMLST(H, clpc, dinb, glpf, gmk, mbl, mdh, purf, pyca1, rpob, tpi)
B.thuringiensis ST7  MLST(K, P, ftsa, gdpd, yhfl)
B.cereus AFS062641Plant, core (2014)USA, North CarolinaMLST(K, ccpa, dinb, ftsa, glpt, pta, purf, purh, recf, succ)
B.cereus AFS018281Plant, Corn core (2014)USA, North CarolinaMLST(K, adk, dinb, ilvd, pta, purh, recf, succ, tpi)
B.cereus AFS058833Plant, Corn core (2014)USA, North CarolinaMLST(K, ftsa, glpt, pyca2, pyre, recf, succ, tpi, yhfl)
B.cereus HB11BC185Food packaging (2011)China, Hebei ProvinceMLST(P)
B.c_group KW35[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.cereus S6625Soil (2007)USA, Maryland, RockvilleMLST(P)
B.thuringiensis BGSC4D12Animal, Insect, Almond moth (Ephestia cautella/Cadra cautella)UK, EnglandMLST(P)
B.cereus S6630Soil (2007)USA, Maryland, RockvilleMLST(P)
B.c_group KW29[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.c_group KW61[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.cereus 2004721590Soil, mud (2004)USA, GeorgiaMLST(P)
B.c_group 20166Food (2013)ChinaMLST(P)
B.cereus S6639Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus 2004721589Soil, mud (2004)USA, GeorgiaMLST(P)

120 isolate(s) sharing typing data in supercluster 8

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StrainSourceLocationShared Typing Data
B.cereus FSLR5-0811Dairy products, pasteurized milk (2006)USAMLST(TH, H, K, CS, P)
B.weihenstephanensis FSLR5-860Dairy products, pasteurized milk (2006)USAMLST(TH, H, K, CS, P)
B.cereus FSLM8-0473(2015)USAMLST(TH, H, K, CS, P)
B.cereus FORC024Food, chicken soupKorea (South), IncheonMLST(TH, H, K, CS, P)
B.cereus BDRD-Cer4[Biological Defense Research Directorate (BDRD)]USA, Maryland, RockvilleMLST(TH, H, K, CS, P)
B.cereus AFS012400Plant, Cucumber plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus 16-00196  MLST(TH, H, K, CS, P)
B.cereus AH725Human, eye (1995)Norway, SkienMLST(TH, H, K, CS, P)
B.cereus B4155Food (2013)NetherlandsMLST(TH, H, K, CS, P)
B.c_group VD045SoilGreenlandMLST(TH, H, K, CS, P)
B.cereus AFS053406Plant, Corn plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS011918Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus FORC021Other, KnifeKorea (South), UlsanMLST(TH, H, K, CS, P)
B.cereus 16SBCL1279Human, Breast milk (2016)France, Ile-de-France Lactarium, ParisMLST(TH, H, K, CS, P)
B.thuringiensis Pasteur_Standard[two complete genomes sequenced for this strain with identical MLST sequences] MLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.cereus BHU1Soil, Cropfield soil (2016)IndiaMLST(TH, H, K, P, clpc, dinb, gdpd, yhfl)
B.cereus 16-00198  MLST(TH, H, K, P, clpc, dinb, gdpd, yhfl)
B.cereus F4430/73Other, pea soup or faeces/stools (1973) [diarrheal food poisoning outbreak]BelgiumMLST(TH, H, K, P, clpc, dinb, gdpd, purf)
B.cereus A8S3Other, Sediments (2003)Pacific OceanMLST(TH, H, CS, P, gyrb, mbl, mdh, pyca1, rpob)
B.cereus AFS070416Plant, core (2014)USA, North CarolinaMLST(TH, H, K, P, dinb, gdpd, purf, yhfl)
B.cereus SJ-S27HumanUSA, Tennessee, MemphisMLST(TH, H, K, CS, gmk, purh, tpi)
B.cereus INRAC3Food, pasteurized carrot (1996) (1996)France, VaucluseMLST(TH, H, K, P, dinb, gdpd, purf, yhfl)
B.cereus MOD1Bc218Other, Baby Wipes (2016)USA, MarylandMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.cereus LK9(2010)Malaysia, MalaccaMLST(TH, H, CS, P, gyrb, mbl, mdh, pyca1, rpob)
B.c_group VD169SoilUAE, DubaiMLST(TH, K, CS, P, ftsa, pyre, succ)
B.cereus ATCC14579Other, Farm, cow-shed air (1916)USAAFLP1 AFLP2 MLST(TH, K, CS, ftsa, ilvd, purh, recf, succ)
B.cereus MOD1Bc92Food, Whole Black Pepper (2015)USA, MarylandMLST(TH, H, CS, P, mbl, mdh, muts, pyca1, rpob)
B.c_group VD166SoilUAE, DubaiMLST(TH, H, K, P, dinb, gdpd, yhfl)
B.cereus B4081Food (2013)NetherlandsMLST(TH, H, P, clpc, dinb, gdpd, gyrb, mbl, mdh, purf, pyca1, rpob)
B.cereus 16-00184  MLST(TH, H, P, clpc, dinb, gdpd, gyrb, mdh, muts, purf, pyca1, rpob)
B.cereus Co15Other, Sediments (2003)Pacific OceanMLST(K, P, adk, clpc, dinb, ftsa, gdpd, glpt, panc, pyre, recf, succ, yhfl)
B.cereus MOD1Bc230Food, food product (2016)USA, MarylandMLST(TH, H, P, clpc, gdpd, mbl, mdh, muts, purf, pyca1, rpob, yhfl)
B.cereus FSLK6-1030Dairy products, condensed milk (2013)USAMLST(TH, H, K, P, clpc, dinb, gdpd)
B.cereus SJ-S23HumanUSA, Tennessee, MemphisMLST(TH, K, clpc, dinb, gdpd, gmk, purf, purh, pyre, recf, succ, tpi)
B.cereus C1LSoil or plant, rhizosphere (2003)Taiwan, Taroko National Park, HualienMLST(H, K, clpc, dinb, gdpd, glpf, gmk, ilvd, purf, purh, pyca2, yhfl)
B.thuringiensis T69001 MalaysiaMLST(TH, K, P, clpc, dinb, ftsa, purf, pyre, succ)
B.cereus B4120Food (2013)NetherlandsMLST(TH, H, P, clpc, dinb, gdpd, mbl, muts, pyca1, rpob, yhfl)
B.cereus E41Other, salt lake (2016)Algeria, Ain Mlila-Oum El BouaghiMLST(H, clpc, dinb, gdpd, gmk, gyrb, ilvd, mbl, muts, panc, pta, purh, pyca1, pyca2, rpob, tpi)
B.cereus Rock1-15SoilUSA, Maryland, RockvilleMLST(K, P, adk, clpc, dinb, ftsa, gdpd, glpt, panc, recf, succ)
B.cereus MOD1Bc86Food, Whole Black Pepper (2015)USA, MarylandMLST(TH, H, clpc, dinb, gdpd, gmk, gyrb, ilvd, mdh, muts, purh, pyca1, rpob)
B.thuringiensis BGSC4BW1 SpainMLST(H, P, clpc, dinb, gdpd, gyrb, mbl, muts, pyca1, rpob)
B.cereus MOD1Bc85Food, Ground Black Pepper (2015)USA, MarylandMLST(K, adk, dinb, ftsa, gdpd, glpf, glpt, gmk, panc, purf, purh, pyca2, pyre, recf, succ, tpi)
B.cereus SJ-S9HumanUSA, Tennessee, MemphisMLST(TH, CS, ilvd, mbl, mdh, purh, recf, rpob, succ, tpi)
B.thuringiensis BGSC4H2(1968)CanadaMLST(TH, clpc, dinb, ftsa, gdpd, gyrb, ilvd, mbl, mdh, purh, pyca1, recf, rpob, succ)
B.thuringiensis BGSC4CF1 MalaysiaMLST(K, adk, clpc, dinb, glpf, glpt, gmk, ilvd, panc, pta, purh, pyca2, pyre, succ)
B.c_group VD196SoilUAE, DubaiMLST(H, dinb, gmk, gyrb, ilvd, mbl, mdh, panc, pyca1, pyca2, rpob, tpi)
B.c_group AH716Human, pusNorway, SkienMLST(TH, H)
B.c_group AH1293Human, bloodNorway, TromsoeMLST(TH, H)
B.c_group AH889Human, bloodNorwayMLST(TH, H)
B.c_group AH1294Human, bloodNorway, TromsoeMLST(TH, H)
B.c_group AH726Human, urineNorway, SkienMLST(TH, H)
B.cereus F2668/90Food, lamb (1990) [diarrheal food poisoning outbreak]NetherlandsAFLP2 MLST(P)
B.thuringiensis T09010(1979)USAMLST(P)
B.c_group K15_115(2014)Korea (South)MLST(P)
B.cereus R_2955/03Human, blood (2003) [human septicaemia]UK, EnglandMLST(P)
B.cereus BC_9Food, egg product (2006)Italy (Southern)MLST(P)
B.thuringiensis IBL695Soil (1976)HawaiiMLST(P)
B.cereus BFDA95192(2006)Taiwan, Taipei countyMLST(P)
B.thuringiensis T09024(1991)IndonesiaMLST(P)
B.cereus K15-3447Human, faeces/stools (2015)Korea (South)MLST(P)
B.cereus CBC_99006Human, diarrheaJapanMLST(P)
B.c_group BC00001Dairy products, milk products (2017)Italy, ApuliaMLST(P)
B.cereus 108229.NHuman, wound infection (2004)UK, ScotlandMLST(P)
B.cereus R_3149/03Human, blood (2003) [human septicaemia]UK, EnglandMLST(P)
B.thuringiensis T09011Animal, Insect, Lepidoptera (1987)IraqMLST(P)
B.c_group MCCC1A00418Other, sediments (2005)Pacific OceanMLST(P)
B.c_group MCCC1A00432Other, sediments (2005)Pacific OceanMLST(P)
B.cereus 000-843-51Human, blood (2004) [human pneumonia]JapanMLST(P)
B.cereus NC1225Human, faeces/stools (1996)JapanMLST(P)
B.thuringiensis BGSC4L5(1990) [sequences conflicting with isolate T09020]ItalyMLST(P)
B.c_group MCCC1A06185Other, middle seawater (2009)Pacific OceanMLST(P)
B.cereus 200593.XHuman, wound infection (2004)UK, ScotlandMLST(P)
B.c_group FSLR5-0859Dairy products, milk products (2006)USAMLST(P)
B.c_group MCCC1A00495Other, sediments (2005)Pacific OceanMLST(P)
B.cereus 149041.SHuman, wound infection (2004)UK, ScotlandMLST(P)
B.cereus Sve1Human, blood (2003)ItalyMLST(P)
B.thuringiensis T09034(1992)BrazilMLST(P)
B.cereus BC_5Food, egg product (2006)Italy (Southern)MLST(P)
B.cereus EFBC85Food (2017)AustriaMLST(P)
B.cereus S6566Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus B548  MLST(P)
B.c_group MCCC1A01400Other, sediments (2006)Indian OceanMLST(P)
B.cereus 134070.JHuman, wound infection (2004)UK, ScotlandMLST(P)
B.cereus NC499Food (1983)JapanMLST(P)
B.cereus 2003-I-1253Human, blood (2003) [human septicaemia, fatal]USA, OregonMLST(P)
B.cereus 2003-I-1254Human, blood (2003) [human, fatal]USA, OregonMLST(P)
B.cereus BFDA96117Food (2007)Taiwan, Taoyuan countyMLST(P)
B.cereus CBC_03004Human, diarrheaJapanMLST(P)
B.c_group K14_4528(2014)Korea (South)MLST(P)
B.cereus BC_32Food, ready-to-eat product (2006)Italy (Northwestern)MLST(P)
B.cereus BGSC6A42Food packaging [sequences conflicting with isolate TSP8] MLST(P)
B.cereus BC_17Food, egg product (2006)Italy (Southern)MLST(P)
B.c_group MCCC1A08490Other, sediments (2011)Arctic OceanMLST(P)
B.c_group MCCC1A01874Other, sediments (2006)Pacific OceanMLST(P)
B.cereus F6722Food (1985) [diarrheal food poisoning]USA, AlabamaMLST(P)
B.cereus F99/5941Other, environmental (1999) [food-water-environment survey isolate] MLST(P)
B.cereus LFB541Food, Rice cream (1982)BrazilMLST(TH)
B.cereus XA12-18Dairy products, milk products (2012)ChinaMLST(P)
B.c_group MCCC1A00298Other, sediments (2006)Pacific OceanMLST(P)
B.thuringiensis T09052Other, spider web (1999)CanadaMLST(P)
B.c_group MCCC1A00360Other, sediments (2006)Pacific OceanMLST(P)
B.c_group MCCC1A06183Other, bottom seawater (2009)Pacific OceanMLST(P)
B.cereus 177147.YHuman, wound infection (2005)UK, ScotlandMLST(P)
B.cereus NC1292Food, rice (1999)JapanMLST(P)
B.cereus BC_29Food, ready-to-eat product (2006)Italy (Northwestern)MLST(P)
B.thuringiensis BGSC4L2Animal, Insect, Almond moth (Ephestia cautella/Cadra cautella)UK, EnglandMLST(P)
B.c_group MCCC1A06184Other, surface seawater (2009)Pacific OceanMLST(P)
B.cereus BFDA96166Food, rice (2007)Taiwan, Taipei countyMLST(P)
B.cereus D8096Human, blood (1971)USA, LouisianaMLST(P)
B.c_group MCCC1A04083Other, surface seawater (2009)Pacific OceanMLST(P)
B.thuringiensis BGSC4L1Animal, Insect, Almond moth (Cadra cautella) [sequences conflicting with isolate HD125]UK, EnglandMLST(P)
B.c_group MCCC1A08292Other, sediments (2011)Arctic OceanMLST(P)
B.cereus G2008Human, faeces/stools (1988) [food poisoning]USA, PennsylvaniaMLST(P)
B.cereus 201183.DHuman, wound infection (2003)UK, ScotlandMLST(P)
B.cereus 653-154-7Human, blood (2003) [human pneumonia]JapanMLST(P)
B.cereus HF16Food (2014)Germany, BerlinMLST(P)
B.cereus B06_036Human, bloodTahiti, PapeeteMLST(TH)
B.thuringiensis HD489Animal, Insect, Oriental Leafworm Moth/Cluster caterpillar/Cotton leafworm/Tobacco cutworm/Tobacco caterpillar/Tropical armyworm (Spodoptera litura/Prodenia litura) on sweet potatoUSAAFLP2
B.cereus D26Food; Food Research Institute, University of Wisconsin-MadisonUSA, Wisconsin, MadisonAFLP2
B.c_group AH585Soil, beech grove (1993)Norway, MossAFLP1

2 isolate(s) sharing typing data in supercluster 9

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StrainSourceLocationShared Typing Data
B.thuringiensis HD540 GermanyAFLP2
B.thuringiensis HD201Animal, Insect, Greater Wax Moth/Honeycomb Moth (Galleria mellonella)UK, EnglandAFLP2

3 isolate(s) sharing typing data in supercluster 10

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StrainSourceLocationShared Typing Data
B.cereus MOD1Bc69Food, Paprika (2015)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc18Plant, Sesame Seed White (2015)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc75Plant, Sesame Seed (2015)USA, MarylandMLST(TH, H, K, CS, P)

72 isolate(s) sharing typing data in supercluster 11

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StrainSourceLocationShared Typing Data
B.thuringiensis HD521Soil, soybean fieldUSA, IndianaMLST(TH, H, K, CS, P)
B.thuringiensis GOE4#1Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(TH, H, K, CS, P)
B.c_group BAG4O-1SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.cereus AFS002530Plant, Weed leaf (2014)USA, OhioMLST(TH, H, K, CS, P)
B.cereus AFS096226Plant, Soybean leaf (2013)USA, MinnesotaMLST(TH, H, K, CS, P)
B.cereus AFS033276Plant, tree leaf (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.c_group BAG3O-2SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.cereus AFS009734Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS064975(2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS034541Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS002102Plant, Soybean leaf (2013)USA, MinnesotaMLST(TH, H, K, CS, P)
B.cereus AFS060282Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS011006Plant, Soybean leaf (2013)USA, MinnesotaMLST(TH, H, K, CS, P)
B.cereus AFS001073Plant, Weed leaf (2014)USA, OhioMLST(TH, H, K, CS, P)
B.cereus tsu1Other, contaminated cellulose-agar plate (2009)USA, Tennessee, NashvilleMLST(TH, H, K, CS, P)
B.cereus AFS072350Plant, Soybean leaf (2013)USA, MinnesotaMLST(TH, H, K, CS, P)
B.cereus AFS016365Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS097474Plant, Weed leaf (2014)USA, IndianaMLST(TH, H, K, CS, P)
B.cereus AFS003410Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus AFS041041Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus K8#2Food, Korean fermented food (2016)Korea (South)MLST(TH, H, K, CS, P)
B.cereus AFS015304Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS063157Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus LCR12Plant, karkalla (Carpobrotus rossii) (2014) [from Cadmium-contaminated soil]Australia, MelbourneMLST(TH, H, K, CS, P)
B.cereus FSLW8-0767Other, Sifter powder (2012)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS029029Plant, Corn (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS051626Plant, Weed leaf (2014)USA, IndianaMLST(TH, H, K, CS, P)
B.cereus AFS093833Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS003807Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, P, clpc, dinb, gdpd, purf)
B.thuringiensis BGSC4BF1 GermanyMLST(TH, H, K, P, dinb, gdpd, purf, yhfl)
B.cereus AFS086321Plant, core (2014)USA, North CarolinaMLST(H, K, P, clpc, dinb, gdpd, purf, yhfl)
B.thuringiensis INTAFr7-4SoilArgentina, MisionesMLST(TH, H, K, P, clpc, dinb, gdpd, purf)
B.cereus AFS070889Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, P, clpc, dinb, gdpd, yhfl)
B.cereus 172560.WHuman, burn wound (2003) [human wound infection]UK, Scotland, GlasgowMLST(TH, H, K, P, clpc, gdpd, purf)
B.cereus AFS024973Plant, core (2014)USA, North CarolinaMLST(H, CS, gmk, gyrb, ilvd, mdh, muts, pta, purh, pyca1, pyca2, rpob, tpi)
B.cereus MOD1Bc57Other, Baby Wipes (2016)USA, MarylandMLST(H, K, CS, gmk, ilvd, purh, pyca2, tpi)
B.cereus SJ-S19HumanUSA, Tennessee, MemphisMLST(TH, H, K, clpc, dinb, gdpd, gmk, ilvd, tpi, yhfl)
B.cereus AFS099102Plant, Weed leaf (2014)USA, IndianaMLST(TH, H, K, clpc, dinb, gdpd, gmk, ilvd, purf, tpi)
B.cereus MOD1Bc139Food, Dietary Supplements (2015)USA, MarylandMLST(TH, H, P, dinb, gdpd, gyrb, mdh, muts, purf, pyca1, rpob, yhfl)
B.cereus SJ-S22  MLST(P, ccpa, dinb, ftsa, gdpd, glpt, gyrb, mbl, mdh, muts, panc, purf, pyca1, pyre, recf, succ, yhfl)
B.cereus AFS041581Plant, Soybean root (2014)USA, MissouriMLST(P, adk, clpc, dinb, ftsa, gdpd, glpt, gyrb, mdh, muts, purf, pyca1, pyre, rpob, succ, yhfl)
B.cereus A1Other, sludge of an anaerobic digestion reactor (2011) [efficient starch-utilizing producer of hydrogen]China, BeijingMLST(K, P, adk, ccpa, ftsa, panc, pyre, recf, succ, yhfl)
B.cereus AH1134Human, eye [pediatric endophthalmitis case]USA, OklahomaMLST(TH, H, K, dinb, gdpd, purf, tpi)
B.cereus SJ-S5HumanUSA, Tennessee, MemphisMLST(K, adk, ccpa, clpc, dinb, glpf, glpt, gmk, ilvd, pta, purf, purh, pyre, recf, succ)
B.cereus SJ-S10HumanUSA, Tennessee, MemphisMLST(K, adk, ccpa, clpc, ftsa, gdpd, glpf, glpt, ilvd, pta, purf, pyca2, pyre, recf, tpi)
B.cereus AFS093276Plant, core (2014)USA, North CarolinaMLST(P, adk, dinb, ftsa, gdpd, glpt, gyrb, mdh, muts, purf, pyre, recf, rpob, succ)
B.cereus SJ-S29HumanUSA, Tennessee, MemphisMLST(K, ccpa, ftsa, gdpd, glpt, gmk, ilvd, panc, pta, purf, purh, pyca2, pyre, succ, tpi)
B.thuringiensis DB27[highly nematicidal] MLST(K, P, ftsa, glpt, purf, recf)
B.c_group AH1129Human, eyeUSA, OklahomaMLST(TH, H)
B.thuringiensis HD516Soil, soybean fieldUSAAFLP2 MLST(P)
B.thuringiensis 2008724754Animal, Insect, dung beetle (2009)GermanyMLST(P)
B.thuringiensis IBL3576Soil (1983)USA, PennsylvaniaMLST(P)
B.cereus S6637Soil (2007)USA, Maryland, RockvilleMLST(P)
B.thuringiensis 2008724755Animal, Insect, dung beetle (2009)GermanyMLST(P)
B.c_group K14_5491(2014)Korea (South)MLST(P)
B.c_group C3g6Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.cereus B06_034HumanFranceMLST(TH)
B.cereus F95/2410Human, gangrene, cellulitis; Public Health Laboratory (1995)UK, Wales, CardiffMLST(P)
B.thuringiensis 2013746963Human, blood (2013) [human vomiting]USA, California, San DiegoMLST(P)
B.cereus E1149Human, lung (1978)USA, MissouriMLST(P)
B.cereus 101937.QHuman, wound infection (2004)UK, ScotlandMLST(P)
B.c_group KW38[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.c_group FSLM8-0139Dairy products, milk products (2012)USAMLST(P)
B.thuringiensis T13028Soil (1993)ChileMLST(P)
B.thuringiensis IBL77Soil (1988)USA, WyomingMLST(P)
B.c_group KW22[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.cereus 180215.FHuman, wound infection (2004)UK, ScotlandMLST(P)
B.thuringiensis 2008724756Animal, Insect, dung beetle (2009)GermanyMLST(P)
B.cereus 140936.SHuman, wound infection (2004)UK, ScotlandMLST(P)
B.c_group Wang  MLST(P)
B.thuringiensis IBL673Soil (1987)USA, New HampshireMLST(P)
B.thuringiensis HD511Soil, barley fieldUSA, North DakotaAFLP2

219 isolate(s) sharing typing data in supercluster 12

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StrainSourceLocationShared Typing Data
B.anthracis A0465Animal, cattle (Cow), spleen (1997) [two complete genomes sequenced for this strain with identical MLST sequences; pXO1+/pXO2+]France, Pyrenees mountainsAFLP2 MLST(TH, H, K, CS, P)
B.anthracis Sterne USAAFLP1 MLST(TH, H, K, CS, P)
B.anthracis Australia94Animal, cattle (Bovine) (1994) [pXO1+/pXO2+]Australia, Victoria ProvinceAFLP2 MLST(TH, H, K, CS, P)
B.anthracis K8215[pXO1+/pXO2+]ArgentinaAFLP2 MLST(TH, H, K, CS, P)
B.anthracis Vollum[this strain is used in research studies and is found in the UK, Spain, and Zimbabwe; pXO1+/pXO2+; two complete genomes sequenced for this strain with identical MLST sequences] AFLP1 MLST(TH, H, K, CS, P)
B.anthracis A0463Animal, sheep (1978) [reported as pXO1+/pXO2+ but no pXO2 sequence in genome]PakistanAFLP2 MLST(TH, H, K, CS, P)
B.anthracis K4516Animal, cattle (Bovine) (1939) [pXO1+/pXO2+]USA, MarylandAFLP2 MLST(TH, H, K, CS, P)
B.anthracis ATCC14185Animal, cattle (bovine) (1951) [United States Human Vaccine strain; pXO1+/pXO2-; two complete genomes sequenced for this strain with identical MLST sequences]USA, FloridaAFLP2 MLST(TH, H, K, CS, P)
B.anthracis A0248Human (1968) [pXO1+/pXO2+]USA, OhioAFLP2 MLST(TH, H, K, CS, P)
B.anthracis K1285[pXO1+/pXO2+]NamibiaAFLP2 MLST(TH, H, K, CS, P)
B.anthracis K3Human [pXO1+/pXO2+]South AfricaMLST(TH, H, K, CS, P)
B.anthracis Ba-7673/89-GeoSoil (1989)GeorgiaMLST(TH, H, K, CS, P)
B.anthracis 3166SoilBulgariaMLST(TH, H, K, CS, P)
B.anthracis Ba-8784/92-GeoFood, Beef (1992)GeorgiaMLST(TH, H, K, CS, P)
B.anthracis Canadian_bisonAnimal, Bison [pXO1+/pXO2+]CanadaMLST(TH, H, K, CS, P)
B.anthracis TI[Soviet Union livestock vaccine strain; pXO1+/pXO2+]USSRMLST(TH, H, K, CS, P)
B.anthracis K2129(1997)China, ChangpingMLST(TH, H, K, CS, P)
B.anthracis 2000031006(1956)USA, New MexicoMLST(TH, H, K, CS, P)
B.anthracis 2000032979 USA, New JerseyMLST(TH, H, K, CS, P)
B.anthracis Sen3 SenegalMLST(TH, H, K, CS, P)
B.anthracis P482  MLST(TH, H, K, CS, P)
B.anthracis PR09-4 USAMLST(TH, H, K, CS, P)
B.anthracis ANSES94  MLST(TH, H, K, CS, P)
B.anthracis Shikan-NIIDAnimal, horse (1928) [pXO1+/pXO2+; two complete genomes sequenced for this strain with identical MLST sequences]Japan, TokyoMLST(TH, H, K, CS, P)
B.anthracis BF1Animal, cattle (cow) carcass (2009) [from a cow that had succumbed to anthrax; pXO1+/pXO2+]Germany, BavariaMLST(TH, H, K, CS, P)
B.anthracis PR10-4 USAMLST(TH, H, K, CS, P)
B.anthracis PR07 USAMLST(TH, H, K, CS, P)
B.anthracis 44-NIAH[pXO1+/pXO2+; two complete genomes sequenced for this strain with identical MLST sequences] MLST(TH, H, K, CS, P)
B.anthracis SVA11Animal, cattle (2011) [from an outbreak in cattle that occurred in a Swedish nature reserve; pXO1+/pXO2+]SwedenMLST(TH, H, K, CS, P)
B.anthracis CNEVAHuman [pXO1+/pXO2+]France (Southern)MLST(TH, H, K, CS, P)
B.anthracis 2000031027Animal, cattle (1957)USA, OklahomaMLST(TH, H, K, CS, P)
B.anthracis A1055[belongs to the divergent C branch; pXO1-/pXO2+]USA, LouisianaMLST(TH, H, K, CS, P)
B.anthracis 2000032989  MLST(TH, H, K, CS, P)
B.anthracis 500  MLST(TH, H, K, CS, P)
B.anthracis Ba-9108/08-GeoHuman, Patient ulcer (2008)GeorgiaMLST(TH, H, K, CS, P)
B.anthracis 2000032975(1966) MLST(TH, H, K, CS, P)
B.anthracis PR02 USAMLST(TH, H, K, CS, P)
B.anthracis 663  MLST(TH, H, K, CS, P)
B.anthracis ANSES101  MLST(TH, H, K, CS, P)
B.anthracis ANSES00-82Animal, cattle (bovine) (2000)France, SavoieMLST(TH, H, K, CS, P)
B.anthracis Ba-9065/08-GeoHuman, Patient ulcer (2008)GeorgiaMLST(TH, H, K, CS, P)
B.anthracis 4599Human, Scottish heroin user (2009)UK, Scotland, GlasgowMLST(TH, H, K, CS, P)
B.anthracis 3154SoilBulgariaMLST(TH, H, K, CS, P)
B.anthracis BFV[pXO1+/pXO2+] MLST(TH, H, K, CS, P)
B.anthracis K0021Animal, Sheep (1995)ItalyMLST(TH, H, K, CS, P)
B.anthracis PR01 USAMLST(TH, H, K, CS, P)
B.anthracis BA1004(2000) [pXO1+/pXO2+]USA, TexasMLST(TH, H, K, CS, P)
B.anthracis DS201579Animal, Blue Wildebeest (Connochaetes taurinus) (2015)South Africa, Kruger National Park, PafuriMLST(TH, H, K, CS, P)
B.anthracis A.Br.003Human, child cutaneous anthraxUK, Scotland, DundeeMLST(TH, H, K, CS, P)
B.anthracis Sen2Col2 SenegalMLST(TH, H, K, CS, P)
B.anthracis K1Soil (2014)Namibia, Etosha National ParkMLST(TH, H, K, CS, P)
B.anthracis 9080-GSoil (1998) [pXO1+/pXO2+]Georgia, GardabaniMLST(TH, H, K, CS, P)
B.anthracis 52-GAnimal, cattle (bovine) (2009) [pXO1+/pXO2+]Georgia, TbilisiMLST(TH, H, K, CS, P)
B.anthracis H9401Human, cutaneous anthrax patient [pXO1+/pXO2+]Korea (South)MLST(TH, H, K, CS, P)
B.anthracis PollinoAnimal, cattle (bovine) carcass (2014) [from a bovine anthrax-burial site; pXO1+/pXO2+]Italy, Pollino National Park, BasilicataMLST(TH, H, K, CS, P)
B.anthracis Kafkas-60Animal, Sheep (2006)Turkey, ArpacayMLST(TH, H, K, CS, P)
B.anthracis 95014[pXO1+/pXO2-] MLST(TH, H, K, CS, P)
B.anthracis Kafkas-68Animal, Cattle (2007)Turkey, KarsMLST(TH, H, K, CS, P)
B.anthracis Ba-1897/12-GeoFood, Beef (2012)GeorgiaMLST(TH, H, K, CS, P)
B.anthracis K3974(1995)SlovakiaMLST(TH, H, K, CS, P)
B.anthracis ANSES89  MLST(TH, H, K, CS, P)
B.anthracis ANSES88  MLST(TH, H, K, CS, P)
B.anthracis Parent2 USAMLST(TH, H, K, CS, P)
B.anthracis 781  MLST(TH, H, K, CS, P)
B.anthracis ANSES118  MLST(TH, H, K, CS, P)
B.anthracis 2000031023Animal, cattle (1957) MLST(TH, H, K, CS, P)
B.anthracis Ba-8782/92-GeoAnimal, Sheepskin (1992)GeorgiaMLST(TH, H, K, CS, P)
B.anthracis FDAARGOS341Other, Colorado Serum Co., Anthrax Spore Vaccine (2015) MLST(TH, H, K, CS, P)
B.anthracis 2000032832  MLST(TH, H, K, CS, P)
B.anthracis Kafkas-86Animal, Cattle (2006)Turkey, KarsMLST(TH, H, K, CS, P)
B.anthracis Parent1 USAMLST(TH, H, K, CS, P)
B.anthracis PR08 USAMLST(TH, H, K, CS, P)
B.anthracis ANSES92  MLST(TH, H, K, CS, P)
B.anthracis K4834Animal, cattle (Bovine) (1997)AustraliaMLST(TH, H, K, CS, P)
B.anthracis Ames[pXO1-/pXO2-; Ames strain cured of the pXO1 and pXO2 plasmids at UK Defence Science and Technology Laboratory]UK, England, Porton DownMLST(TH, H, K, CS, P)
B.anthracis A1144[pXO1+/pXO2+; shows mucoid colony morphology]ArgentinaMLST(TH, H, K, CS, P)
B.anthracis A0021Animal, Hippopotamus (1997)Zambia, Western ProvinceMLST(TH, H, K, CS, P)
B.anthracis 2000032967  MLST(TH, H, K, CS, P)
B.anthracis 2000031765  MLST(TH, H, K, CS, P)
B.anthracis K2883Human (1997)IndiaMLST(TH, H, K, CS, P)
B.anthracis CDC684[originally labeled B.megaterium; shows significant attenuation of virulence; pXO1+/pXO2+] MLST(TH, H, K, CS, P)
B.anthracis BA1035Human, Clinical [pXO1+/pXO2+]South AfricaMLST(TH, H, K, CS, P)
B.anthracis 721  MLST(TH, H, K, CS, P)
B.anthracis HYU01Soil (2009) [pXO1+/pXO2+]Korea (South), ChangnyeongMLST(TH, H, K, CS, P)
B.anthracis A0389#2[pXO1+/pXO2+; two complete genomes sequenced for this strain with different MLST sequences; strain sequenced by Biosurveillance, MRIGlobal, Palm Bay, Florida, USA; sequences conflicting with isolate A0389#1]Indonesia, West Java, BekasiMLST(TH, H, K, CS, P)
B.anthracis 2000031038(1957) MLST(TH, H, K, CS, P)
B.anthracis A1075Animal, cattle [pXO1+/pXO2+]Chile, Lago Ranco-Valdivia Agricola Quillin Va. RegionMLST(TH, H, K, CS, P)
B.anthracis A1039Animal, cattle (1999)Bolivia, Santa CruzMLST(TH, H, K, CS, P)
B.anthracis Kafkas-215Soil (2014)Turkey, SelimMLST(TH, H, K, CS, P)
B.anthracis 2000032968  MLST(TH, H, K, CS, P)
B.anthracis P417  MLST(TH, H, K, CS, P)
B.anthracis Vollum1BHuman (1951) [weaponized Vollum substrain used in American warheads during the 1960-s; pXO1+/pXO2+]USAMLST(TH, H, K, CS, P)
B.anthracis 2000031039Animal, cattle (1957) MLST(TH, H, K, CS, P)
B.anthracis A16R[attenuated variant of strain A16; pXO1+/pXO2-] MLST(TH, H, K, CS, P)
B.anthracis PasteurAnimal, cat [pXO1-/pXO2+] MLST(TH, H, K, CS, P)
B.anthracis PR06 USAMLST(TH, H, K, CS, P)
B.anthracis ANSES32  MLST(TH, H, K, CS, P)
B.anthracis Tangail-1Soil (2012)Bangladesh, TangailMLST(TH, H, K, CS, P)
B.anthracis 2000031008 USA, AlabamaMLST(TH, H, K, CS, P)
B.anthracis StendalAnimal, cattle (bovine) (Bos bovis) (2012)Germany, Saxony-AnhaltMLST(TH, H, K, CS, P)
B.anthracis Sterne34F2Animal, cattle (cow) (1937) [Animal vaccine strain; pXO1+/pXO2-; two complete genomes sequenced for this strain with identical MLST sequences]South AfricaMLST(TH, H, K, CS, P)
B.anthracis K2Soil (2014)Namibia, Etosha National ParkMLST(TH, H, K, CS, P)
B.anthracis PR05 USAMLST(TH, H, K, CS, P)
B.anthracis Turkey32Human, skin (1991) [pXO1+/pXO2+]Turkey, YozgatMLST(TH, H, K, CS, P)
B.anthracis 2002013094Soil (1956) [pXO1+/pXO2+; two complete genomes sequenced for this strain with identical MLST sequences]USAMLST(TH, H, K, CS, P)
B.anthracis Ba-8785/92-GeoHuman, Patient ulcer (1992)GeorgiaMLST(TH, H, K, CS, P)
B.anthracis PR09-1 USAMLST(TH, H, K, CS, P)
B.anthracis ANSES08-8_20Animal, cattle (bovine) (2008)France, DoubsMLST(TH, H, K, CS, P)
B.anthracis Tyrol4675Animal, cattle (Cow) (1988)Austria, TyrolMLST(TH, H, K, CS, P)
B.anthracis 55-VNIIVViMOther, Commercial vial (2014)Georgia, TbilisiMLST(TH, H, K, CS, P)
B.anthracis K1129Animal, goat hair (1995)PakistanMLST(TH, H, K, CS, P)
B.anthracis ANSES122  MLST(TH, H, K, CS, P)
B.anthracis 2000031075Animal, cattleSouth AfricaMLST(TH, H, K, CS, P)
B.anthracis AmesAncAnimal, cattle (Cow) (1981) [this strain is the progenitor of all the Ames strains used as research tools in laboratories around the world; pXO1+/pXO2+]USA, Texas, SaritaMLST(TH, H, K, CS, P)
B.anthracis ANSES86  MLST(TH, H, K, CS, P)
B.anthracis 2000031031Human (1957)USA, MassachusettsMLST(TH, H, K, CS, P)
B.anthracis deltaSterne[pXO1-/pXO2-] MLST(TH, H, K, CS, P)
B.anthracis 52-40-NIAHAnimal, horse (1940) [pXO1+/pXO2+; two complete genomes sequenced for this strain with identical MLST sequences]ChinaMLST(TH, H, K, CS, P)
B.anthracis WestNAAnimal, Bison [pXO1+/pXO2+]CanadaMLST(TH, H, K, CS, P)
B.anthracis CZC5Animal, Hippopotamus tissues (2011) [from hippopotamuses that had died during an anthrax outbreak]ZambiaMLST(TH, H, K, CS, P)
B.anthracis KrugerB[pXO1+/pXO2+]South Africa, Kruger National ParkMLST(TH, H, K, CS, P)
B.anthracis A16[pXO1+/pXO2+] MLST(TH, H, K, CS, P)
B.anthracis Ba-8884/94-GeoHuman, Patient ulcer (1994)GeorgiaMLST(TH, H, K, CS, P)
B.anthracis 2000031709(1956)USA, CarolinasMLST(TH, H, K, CS, P)
B.anthracis Kafkas-100Soil (2009)Turkey, DigorMLST(TH, H, K, CS, P)
B.anthracis A0157Animal, Pig (1996) [derived from strain ATCC4728; pXO1-/pXO2+]USAMLST(TH, H, K, CS, P)
B.anthracis 2000032819  MLST(TH, H, K, CS, P)
B.anthracis 2000032951Human (1958) MLST(TH, H, K, CS, P)
B.anthracis 14RA5914Animal, cattle (bovine) (Bos primigenius taurus) spleen (2014)Germany, DobichauMLST(TH, H, K, CS, P)
B.anthracis Carbosap[attenuated, toxigenic, capsulated strain; shows significant attenuation of virulence; used in Italy as a live spore vaccine for cattle and sheep; pXO1+/pXO2+; two complete genomes sequenced for this strain with identical MLST sequences between]Somalia, Asmara, Institute Vacci nogeno or Italy, RomeMLST(TH, H, K, CS, P)
B.anthracis STI-1[vaccine strain; pXO1+/pXO2-]RussiaMLST(TH, H, K, CS, P)
B.anthracis Kafkas-149Soil (2012)Turkey, SelimMLST(TH, H, K, CS, P)
B.anthracis FloridaHuman [from bioterror mailing attacks in 2001; pXO1+/pXO2+]USA, FloridaMLST(TH, H, K, CS, P)
B.anthracis Ba-8776/92-GeoHuman, Patient ulcer (1992)GeorgiaMLST(TH, H, K, CS, P)
B.anthracis SPV842_15Animal, cattle (bovine) (Bos taurus) liver [from bovine aborted fetus] (2015)BrazilMLST(TH, H, K, CS, P)
B.anthracis STI1Other, laboratory strain (1970) [vaccine strain; pXO1+/pXO2-]Russia, SaratovMLST(TH, H, K, CS, P)
B.anthracis Kafkas-78Animal, Cattle (2008)Turkey, KarsMLST(TH, H, K, CS, P)
B.anthracis Smith1013[pXO1-/pXO2+] MLST(TH, H, K, CS, P)
B.anthracis Gmb1 GambiaMLST(TH, H, K, CS, P)
B.anthracis A0389#1[pXO1+/pXO2+; two complete genomes sequenced for this strain with different MLST sequences; strain sequenced by Los Alamos National Laboratory, Los Alamos, New Mexico, USA; sequences conflicting with isolate A0389#2]Indonesia, West Java, BekasiMLST(H, K, CS, gmk, ilvd, pta, purh, pyca2, tpi)
B.anthracis A0193Animal, cattle (cow) (1996) [pXO1+/pXO2+]USA, South DakotaAFLP2 MLST(K, CS, ccpa, ftsa, glpt, gmk, ilvd, pta, purh, pyca2, pyre, recf, succ, tpi)
B.anthracis 8903-GSoil (1997) [pXO1+/pXO2+]Georgia, GardabaniMLST(TH, K, CS, P, ftsa, pyre, recf)
B.anthracis A0174Animal, cattle (bovine) (1974) [pXO1+/pXO2-]CanadaMLST(H, K, CS, gmk, ilvd, pta, purh, pyca2, tpi)
B.anthracis OhioACBAnimal, pig [pXO1+/pXO2+]USA, OhioMLST(TH, K, CS, P, ftsa, recf, succ)
B.anthracis Ba-1802/12-GeoHuman, Patient ulcer (2012)GeorgiaMLST(H, K, P, clpc, dinb, gdpd, purf, yhfl)
B.anthracis A0488Animal, cattle (cow) (1935) [pXO1+/pXO2+]UK, England, OxfordshireAFLP2 MLST(K, CS, ccpa, ftsa, glpt, gmk, ilvd, pta, purh, pyca2, pyre, recf, succ, tpi)
B.anthracis LarissaAnimal, sheep (Ovis) (2012)GreeceMLST(TH, H, K, P, clpc, gdpd, purf, yhfl)
B.anthracis ANSES99-100Animal, cattle (bovine) (1999)France, NievreMLST(TH, H, K, CS, ilvd, purh, tpi)
B.anthracis 2000031052Animal, cattle (1956)USA, WyomingMLST(TH, K, CS, P, ftsa, recf, succ)
B.anthracis 2000032879(1962) MLST(TH, H, K, CS, gmk, ilvd, tpi)
B.anthracis BrazilianVaccinalAnimal, cattle (bovine) (Bos taurus) Vaccine strain (2016)BrazilMLST(TH, H, K, CS, gmk, purh, tpi)
B.anthracis Zimbabwe89 ZimbabweMLST(TH, H, K, P, dinb, gdpd, purf, yhfl)
B.anthracis ANSES90  MLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.anthracis SK-102Other, Wool from Pakistan (1976) [pXO1+/pXO2+]USA, New JerseyMLST(TH, H, CS, P, gyrb, mbl, mdh, muts, pyca1)
B.anthracis A0442Animal, Kudu (1975) [pXO1+/pXO2+]South Africa, Kruger National ParkAFLP2 MLST(K, CS, ccpa, ftsa, glpt, gmk, ilvd, pta, purh, pyca2, pyre, recf, tpi)
B.anthracis UR-1Human, blood (2012) [from a german heroin user; fatal case of injectional anthrax; pXO1+/pXO2+]Germany, BavariaMLST(TH, K, P, clpc, dinb, gdpd, pyre, recf, succ, yhfl)
B.anthracis 2000032892  MLST(H, K, clpc, dinb, gdpd, glpf, gmk, ilvd, pta, purf, purh, pyca2, yhfl)
B.anthracis HanAnimal, dead cow blood (2013) [from the site of an anthrax outbreak]China, Liaoning ProvinceMLST(K, CS, adk, ccpa, glpt, gmk, ilvd, pta, purh, pyca2, pyre, recf, tpi)
B.anthracis Cvac02Animal, dead cow blood (2013) [from the site of an anthrax outbreak]China, Liaoning ProvinceMLST(TH, K, P, clpc, dinb, pyre, recf, succ, yhfl)
B.anthracis A15[University of Hohenheim; pXO1+/pXO2-]Germany, HohenheimMLST(H, P)
B.anthracis Mali[University of Goettingen; pXO1+/pXO2-]Germany, GoettingenMLST(H, P)
B.anthracis 13/38[Federal Research Centre for Virus Diseases of Animals (BFAV); pXO1+/pXO2+]Germany, JenaMLST(H, P)
B.anthracis 53/59[Federal Research Centre for Virus Diseases of Animals (BFAV); pXO1+/pXO2+]Germany, JenaMLST(H, P)
B.anthracis 4463[Federal Research Centre for Virus Diseases of Animals (BFAV); pXO1+/pXO2+]Germany, JenaMLST(H, P)
B.anthracis 527[Federal Research Centre for Virus Diseases of Animals (BFAV); pXO1+/pXO2+]Germany, JenaMLST(H, P)
B.anthracis 19/57[Federal Research Centre for Virus Diseases of Animals (BFAV); pXO1+/pXO2+]Germany, JenaMLST(H, P)
B.anthracis UDIII-7[Federal Research Centre for Virus Diseases of Animals (BFAV); pXO1+/pXO2+]Germany, JenaMLST(H, P)
B.anthracis B11/38[Federal Research Centre for Virus Diseases of Animals (BFAV); pXO1+/pXO2+]Germany, JenaMLST(H, P)
B.anthracis 19/37[Federal Research Centre for Virus Diseases of Animals (BFAV); pXO1+/pXO2+]Germany, JenaMLST(H, P)
B.anthracis 2157[University of Goettingen; pXO1+/pXO2+]Germany, GoettingenMLST(H, P)
B.anthracis 5261[Federal Research Centre for Virus Diseases of Animals (BFAV); pXO1-/pXO2+]Germany, JenaMLST(H, P)
B.anthracis B22/39[Federal Research Centre for Virus Diseases of Animals (BFAV); pXO1+/pXO2+]Germany, JenaMLST(H, P)
B.anthracis A58[University of Hohenheim; pXO1-/pXO2-]Germany, HohenheimMLST(H, P)
B.anthracis Behring[Federal Research Centre for Virus Diseases of Animals (BFAV); pXO1-/pXO2+]Germany, JenaMLST(H, P)
B.anthracis BCAnimal, cattle (cow) [pXO1-/pXO2+]Korea (South), BongcheonMLST(K, P)
B.anthracis CAU-1Human, blood (1994) [septicaemia anthrax; pXO1+/pXO2+; pXO1+/pXO2+]Korea (South), Kyungjoo CityMLST(K, P)
B.anthracis Pasteur2[pXO1+/pXO2- or pXO1-/pXO2-] MLST(K, P)
B.anthracis B19/39[Federal Research Centre for Virus Diseases of Animals (BFAV); pXO1+/pXO2+]Germany, JenaMLST(P, adk, ccpa, ftsa, glpt, recf, succ)
B.anthracis ATCC14186[pXO1+/pXO2-] MLST(K, P)
B.anthracis 7700[pXO1-/pXO2-]AfricaMLST(TH, H)
B.anthracis NVH93Animal, cattle (Bovine) (1993)NorwayMLST(TH, H)
B.anthracis NVH87Animal, cattle (Bovine) (1987)NorwayMLST(TH, H)
B.anthracis EPI674Human, muscle, Heroin abuserNorwayMLST(TH, H)
B.anthracis A0462#1Animal, Guinea pig (1988) [Ames strain reisolated from guinea pig; pXO1+/pXO2+]UKAFLP2 MLST(P)
B.anthracis A0102Animal, pig (1944) [pXO1+/pXO2+]Mozambique, MaputoAFLP2 MLST(P)
B.anthracis A0034Animal, cattle (bovine) (1990) [cattle anthrax; pXO1+/pXO2+]China, ChangpingAFLP2 MLST(P)
B.anthracis A0062Animal, cattle (bovine) (1962) [pXO1+/pXO2+ or pXO1-/pXO2+]PolandAFLP2 MLST(P)
B.anthracis CN2Soil (2000) [pXO1+/pXO2+]Korea (South), ChangnyeongMLST(P)
B.anthracis ET-51B(2000)Namibia, Etosha National ParkMLST(P)
B.anthracis 2000031756[pXO1-/pXO2-] MLST(P)
B.anthracis CAU-2Human, blood (1994) [septicaemia anthrax; pXO1+/pXO2+]Korea (South), Kyungjoo CityMLST(P)
B.anthracis B04_025Animal, cattle (cow)FranceMLST(TH)
B.anthracis Ames_BA1004(2000)USAMLST(P)
B.anthracis ANT1HumanJapanMLST(P)
B.anthracis A73[University of Hohenheim; pXO1-/pXO2+]Germany, HohenheimMLST(H)
B.anthracis ET-79B(2000)Namibia, Etosha National ParkMLST(P)
B.anthracis 2002013066[pXO1-/pXO2-] MLST(P)
B.anthracis A0462#2Animal, dead cow (1981) [cattle]USAMLST(P)
B.anthracis B06_040SoilItalyMLST(TH)
B.anthracis B06_038SoilItalyMLST(TH)
B.anthracis ET-76B(2000)Namibia, Etosha National ParkMLST(P)
B.anthracis CN1Human, blood (2000) [septicaemia anthrax; pXO1+/pXO2+]Korea (South), ChangnyeongMLST(P)
B.anthracis 2000032882[pXO1-/pXO2+] MLST(P)
B.anthracis 2002721544[pXO1+/pXO2-] MLST(P)
B.anthracis CAU-3Human, blood (1994) [septicaemia anthrax; pXO1+/pXO2+]Korea (South), Kyungjoo CityMLST(P)
B.anthracis 2000031021SoilUSAMLST(P)
B.anthracis HSAnimal, cattle (Cow)KoreaMLST(K)
B.anthracis GJ-2Animal, cattle (Cow)KoreaMLST(K)
B.anthracis CNAnimal, cattle (Cow)KoreaMLST(K)
B.anthracis K0404  AFLP2
B.anthracis K2484[pXO1+/pXO2+]GermanyAFLP2
B.anthracis K9002[pXO1+/pXO2+]TurkeyAFLP2
B.anthracis K4241[pXO1+/pXO2+]ItalyAFLP2
B.anthracis K7948[pXO1+/pXO2+]TurkeyAFLP2
B.anthracis K6428[pXO1+/pXO2+]TurkeyAFLP2
B.anthracis K7038[pXO1+/pXO2+]Korea (South)AFLP2
B.anthracis K0123[pXO1+/pXO2+]ZambiaAFLP2
B.anthracis K7222[pXO1+/pXO2+]PakistanAFLP2
B.anthracis K7441 CanadaAFLP2

19 isolate(s) sharing typing data in supercluster 13

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StrainSourceLocationShared Typing Data
B.c_group MCCC1A00460Other, sediments (2005)Pacific OceanMLST(P)
B.c_group MCCC1A06361Other, sediments (2010)Gulf of MexicoMLST(P)
B.c_group MCCC1A00394Other, sediments (2005)Pacific OceanMLST(P)
B.c_group MCCC1A00239Other, sediments (2005)Pacific OceanMLST(P)
B.c_group MCCC1A00447Other, sediments (2005)Pacific OceanMLST(P)
B.c_group MCCC1A00262Other, sediments (2005)Pacific OceanMLST(P)
B.c_group MCCC1A06360Other, sediments (2010)Gulf of MexicoMLST(P)
B.c_group MCCC1A00267Other, sediments (2005)Pacific OceanMLST(P)
B.c_group MCCC1A00235Other, sediments (2005)Pacific OceanMLST(P)
B.c_group MCCC1A00266Other, sediments (2005)Pacific OceanMLST(P)
B.c_group MCCC1A00268Other, sediments (2005)Pacific OceanMLST(P)
B.c_group MCCC1A00265Other, sediments (2005)Pacific OceanMLST(P)
B.c_group MCCC1A00431Other, sediments (2005)Pacific OceanMLST(P)
B.c_group MCCC1A00395Other, sediments (2005)Pacific OceanMLST(P)
B.c_group MCCC1A06359Other, sediments (2010)Gulf of MexicoMLST(P)
B.c_group MCCC1A00274Other, sediments (2005)Pacific OceanMLST(P)
B.cereus BGSC6A88Human, wound infection (2004) [sequences conflicting with isolate 179989.X]UK, ScotlandMLST(P)
B.c_group MCCC1A00430Other, sediments (2005)Pacific OceanMLST(P)
B.c_group MCCC1A00419Other, sediments (2005)Pacific OceanMLST(P)

6 isolate(s) sharing typing data in supercluster 14

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StrainSourceLocationShared Typing Data
B.cereus AFS080002Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS028292Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS064200Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS065496Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS039661Soil (2014)USA, New YorkMLST(H, CS, glpf, gmk, gyrb, ilvd, mdh, muts, purh, pyca1, pyca2, rpob, tpi)
B.cereus AFS075781Plant, Soybean core (2014)USA, IowaMLST(TH, CS, P, ftsa, gyrb, mdh, muts, pyca1, recf, rpob, succ)

43 isolate(s) sharing typing data in supercluster 15

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StrainSourceLocationShared Typing Data
B.cereus 822BCERHumanUSA, WashingtonMLST(TH, H, K, CS, P)
B.cereus AFS030229Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus FSLW8-0268Other, Evaporator (last effect) - Liquid (WIP) (2012)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus 823BTHUHumanUSA, WashingtonMLST(TH, H, K, CS, P)
B.cereus 820BCERHumanUSA, WashingtonMLST(TH, H, K, CS, P)
B.cereus SJ-S21HumanUSA, Tennessee, MemphisMLST(TH, H, K, CS, P)
B.cereus B4118Food (2013)NetherlandsMLST(TH, H, K, CS, P)
B.cereus MOD1Bc77Plant, Sesame Seed (2015)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus DSM626(1966)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus N31Other, Sediments (2002)China, South China SeaMLST(TH, H, K, CS, P)
B.cereus SJ-S17HumanUSA, Tennessee, MemphisMLST(TH, H, K, P, clpc, dinb, purf, yhfl)
B.cereus FORC005Food, chicken cutlett (2014)Korea (South), InchonMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.thuringiensis GOE3#1Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(H, K, CS, gmk, ilvd, pta, purh, pyca2, tpi)
B.cereus 29Animal, crab (Callinectes sp.) gastrointestinal tract (2016)Brazil, Ceara, Pacoti River, FortalezaMLST(H, K, CS, glpf, gmk, ilvd, pta, tpi)
B.cereus #17Animal, Mouse microbiota MLST(TH, H, P, clpc, dinb, gdpd, gyrb, mbl, mdh, purf, pyca1, rpob)
B.cereus AFS009840Plant, core (2014)USA, North CarolinaMLST(TH, H, P, clpc, dinb, gdpd, gyrb, mdh, muts, purf, pyca1, rpob)
B.cereus INRAA3Food, starch (1998) (1998)France, NormandieMLST(H, K, clpc, dinb, glpf, gmk, ilvd, panc, pta, purf, purh, tpi, yhfl)
B.cereus A50(2014)AustraliaMLST(TH, H, CS, gmk, gyrb, mdh, muts, purh, pyca1, rpob, tpi)
B.cereus FORC048Plant, Sesame leaf (2014)Korea (South), GwangjuMLST(TH, K, P, clpc, dinb, ftsa, gdpd, purf, pyre, recf)
B.cereus AFS099306Plant, core (2014)USA, North CarolinaMLST(H, K, P, clpc, dinb, purf)
B.cereus MIT0214Other, Deep subsurface (2010) [isolated through enrichment of samples from geologic sequestration sites in pressurized bioreactors containing a supercritical CO2 headspace]USA, TexasMLST(H, K, clpc, dinb, gdpd, gmk, ilvd, panc, purf, purh, pyca2, tpi)
B.cereus AFS033081Animal, Insect, beetle (2013)USA, North CarolinaMLST(TH, H, clpc, dinb, gdpd, gmk, gyrb, ilvd, mdh, muts, purf, pyca1, rpob, tpi)
B.cereus AFS049840Plant, Wheat plant (2014)USA, North CarolinaMLST(TH, H, P, dinb, gyrb, mdh, muts, purf, pyca1, rpob, yhfl)
B.cereus m1550Food, uncooked chicken (1987)BrazilMLST(TH, H, K, P, dinb, yhfl)
B.cereus AFS004498(2014)USA, North CarolinaMLST(TH, H, clpc, dinb, gdpd, gmk, gyrb, ilvd, mdh, purf, purh, pyca1, rpob)
B.cereus D12_2Food, Korean fermented food (2016)Korea (South)MLST(K, adk, ccpa, clpc, dinb, ftsa, gdpd, glpt, gmk, pta, purf, pyca2, recf, succ, tpi, yhfl)
B.cereus 25#1Animal, crab (Ucides sp.) gastrointestinal tract (2016)Brazil, Ceara, Pacoti River, FortalezaMLST(K, adk, ccpa, clpc, dinb, gdpd, glpf, glpt, gmk, ilvd, panc, pta, pyre, recf, succ, tpi)
B.cereus AFS092659Plant, Corn core (2014)USA, North CarolinaMLST(K, adk, ccpa, clpc, dinb, ftsa, glpt, gmk, purf, purh, pyca2, recf, succ, tpi, yhfl)
B.cereus AFS082409Plant, core (2014)USA, North CarolinaMLST(H, clpc, dinb, gdpd, gmk, gyrb, mbl, mdh, pta, pyca1, pyca2, rpob, tpi)
B.cereus VD184  MLST(H, gdpd, glpf, gyrb, ilvd, muts, pta, purf, pyca1, pyca2, rpob, yhfl)
B.cereus B4264Human, blood and pleural fluid (1969) [human fatal pneumonia] MLST(K, adk, ccpa, dinb, ftsa, glpt, gmk, pta, purf, purh, pyca2, succ, tpi)
B.cereus BGSC6A1[Wild type isolate] MLST(CS, P)
B.c_group ATCC11778[B.cereus or B.mycoides]USA, New YorkAFLP1 AFLP2 MLST(P, mbl)
B.c_group K14_4228(2014)Korea (South)MLST(P)
B.cereus K15-3521Human, faeces/stools (2015)Korea (South)MLST(P)
B.thuringiensis S86  MLST(P)
B.cereus S6552Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus BGSC6A2[Wild type isolate] MLST(P)
B.thuringiensis BGSC4E6(1965) [sequences conflicting with isolate T04002]CanadaMLST(P)
B.c_group MCCC1A01404Other, sediments (2006)South China SeaMLST(P)
B.c_group DVM_32SoilJapanMLST(P)
B.cereus ATCC31293  AFLP1 AFLP2
B.c_group AH577Soil, beech grove (1993)Norway, MossAFLP1

10 isolate(s) sharing typing data in supercluster 16

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StrainSourceLocationShared Typing Data
B.thuringiensis IBL3565Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3792Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3682Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3683Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3681Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3793Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3791Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3795Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3794Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3680Soil (2009)USA, MarylandMLST(P)

3 isolate(s) sharing typing data in supercluster 17

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StrainSourceLocationShared Typing Data
B.thuringiensis IMSNU12090[derived from strain KCTC1509 cured of the insecticidal crystal toxin] MLST(K)
B.thuringiensis IMSNU11043  MLST(K)
B.thuringiensis IMSNU10051Animal, diseased insect larvae MLST(K)

41 isolate(s) sharing typing data in supercluster 18

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StrainSourceLocationShared Typing Data
B.cereus MOD1Bc199Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc181Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc194Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc197Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc62Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc193Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc59Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc196Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc200Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc186Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc191Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus Q1Other, deep-subsurface oil reservoirChina (Northeastern), Daqing oil fieldMLST(TH, H, K, CS, P)
B.cereus MOD1Bc188Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc178Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc61Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc202Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc192Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc185Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc65Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc180Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc179Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc60Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc183Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc198Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc56Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc63Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc189Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc58Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc204Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc182Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc195Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.c_group AH826Human, periodontitis (1996)Norway, RogalandMLST(TH, H)
B.c_group AH819Human, periodontitis (1995)Norway, OsloMLST(TH, H)
B.c_group AH825Human, periodontitis (1996)Norway, AkershusMLST(TH, H)
B.c_group AH829Human, periodontitis (1996)Norway, AkershusMLST(TH, H)
B.c_group AH824Human, periodontitis (1996)Norway, AkershusMLST(TH, H)
B.c_group AH828Human, periodontitis (1996)Norway, OsloMLST(TH, H)
B.c_group AH827Human, periodontitis (1996)Norway, HedmarkMLST(TH, H)
B.c_group AH823Human, periodontitis (1996)Norway, OsloMLST(TH, H)
B.c_group AH831Human, periodontitis (1996)Norway, OsloMLST(H, glpf, panc, pta)
B.c_group KW64[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)

10 isolate(s) sharing typing data in supercluster 19

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StrainSourceLocationShared Typing Data
B.pseudomycoides AFS017092Soil (2014)USA, New YorkMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.pseudomycoides AFS060037Soil (2014)USA, New YorkMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.mycoides SB4Food (2016)NetherlandsMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.pseudomycoides AFS018975Soil (2014)USA, New YorkMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.c_group VDM021SoilGreenlandMLST(K, CS, P, adk, ccpa, ftsa, pyre, succ)
B.pseudomycoides FSLK6-0042Dairy products, raw milk (2012)USA, New YorkMLST(K, P, adk, ccpa, clpc, dinb, ftsa, gdpd, purf, pyre, recf, succ, yhfl)
B.c_group VD136SoilUK, ScotlandMLST(K, adk, ccpa, clpc, dinb, ftsa, gdpd, glpf, gmk, ilvd, panc, pta, pyca2, pyre, recf, succ, tpi, yhfl)
B.c_group VDM006SoilSpainMLST(K, adk, ccpa, clpc, dinb, ftsa, gdpd, glpf, gmk, ilvd, panc, pta, pyca2, pyre, succ, tpi)
B.c_group FSLH8-0481Dairy products, milk products (2012)USAMLST(P)
B.c_group FSLK6-1142Other, environmental (2006)USAMLST(P)

45 isolate(s) sharing typing data in supercluster 20

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StrainSourceLocationShared Typing Data
B.mycoides WSBC10969Dairy products, raw milk (2014)GermanyMLST(TH, H, K, CS, P)
B.mycoides S3E15Soil (2016)NetherlandsMLST(TH, H, K, CS, P)
B.mycoides GM5LPPlant, English ray-grass (Lolium perenne)GermanyMLST(TH, H, K, CS, P)
B.mycoides GM6LPPlant, English ray-grass (Lolium perenne)GermanyMLST(TH, H, K, CS, P)
B.weihenstephanensis BtB2-4Soil, forest soil mud [emetic toxin/cereulide producer]BelgiumMLST(TH, H, K, CS, P)
B.mycoides MOD1Bc228Food, food product (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.mycoides M2E15Food, Potato (2014)NetherlandsMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4BQ1SoilSpainMLST(TH, H, K, CS, P)
B.weihenstephanensis CER057Food, parsley [emetic toxin/cereulide producer]BelgiumMLST(TH, H, K, CS, P)
B.c_group VDM019SoilGreenlandMLST(TH, H, K, CS, P)
B.mycoides FSLE2-0214Food, finished RTE dairy food product (2014)USAMLST(K, CS, P, adk, ftsa, glpt, pyre, recf, succ)
B.weihenstephanensis CER074Dairy products, raw milk [emetic toxin/cereulide producer]BelgiumMLST(TH, K, CS, P, ftsa, pyre, recf)
B.mycoides EC18Soil (2016)NetherlandsMLST(TH, K, CS, P, ftsa, pyre, succ)
B.mycoides SB8Soil (2016)NetherlandsMLST(TH, H, CS, P, gyrb, mbl, mdh, muts, pyca1)
B.mycoides S2E19Soil (2016)NetherlandsMLST(H, K, P, clpc, dinb, gdpd, purf)
B.c_group VDM022SoilGreenlandMLST(CS, P, adk, ftsa, glpt, gyrb, mdh, muts, pyca1, pyre, recf, rpob, succ)
B.mycoides FSLH7-0683Dairy products, pasteurized 2% milk (2005)USAMLST(TH, H, K, P, clpc, dinb, purf)
B.mycoides FSLM7-0109Dairy products, raw milk (2011)USAMLST(TH, K, P, clpc, dinb, ftsa, gdpd, pyre, succ)
B.mycoides MOD1Bc221Food, food product (2016)USA, MarylandMLST(TH, H, P, clpc, dinb, gyrb, mbl, mdh, muts, purf, pyca1)
B.c_group VD078SoilGreenlandMLST(TH, H, clpc, gdpd, gmk, mbl, mdh, muts, purh, pyca1, rpob, tpi)
B.mycoides B4117Food (2013)NetherlandsMLST(TH, H, dinb, gdpd, gmk, gyrb, ilvd, mdh, muts, pyca1, rpob, tpi)
B.mycoides ATCC6462SoilKorea (South), SeoulMLST(K, adk, ccpa, clpc, gdpd, glpf, gmk, ilvd, panc, purh, pyca2, pyre, recf, succ, yhfl)
B.mycoides FSLM7-0669Dairy products, raw milk (2011)USAMLST(K, P, adk, dinb, glpt, panc, purf, pyre, succ)
B.thuringiensis PLBPN37/1Soil (2012)PolandMLST(P)
B.c_group KW19[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.thuringiensis PLmBPN20Soil (2012)PolandMLST(P)
B.cereus 37R3Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. hereward grown in a plot in which the previous crop was wheat (Triticum aestivum) var. hereward]UK, England, RothamstedMLST(P)
B.thuringiensis PLmJAS15Soil (2012)PolandMLST(P)
B.thuringiensis PLmJAS20Soil (2012)PolandMLST(P)
B.cereus 37R5Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. cadenza grown in a plot in which the previous crop was wheat (Triticum aestivum) var. hereward]UK, England, RothamstedMLST(P)
B.c_group D10-8.A.iSoil (2006)UKMLST(P)
B.cereus 32R6Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. hereward grown in a plot in which the previous crop was wheat (Triticum aestivum) var. hereward]UK, England, RothamstedMLST(P)
B.cereus 22R5Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. x:19 grown in a plot in which the previous crop was wheat (Triticum aestivum) var. hereward]UK, England, RothamstedMLST(P)
B.weihenstephanensis Bw204Food (2005)UK, Wales, CardiffMLST(P)
B.cereus 58R3Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. hereward grown in a plot in which the previous crop was wheat (Triticum aestivum) var. cadenza]UK, England, RothamstedMLST(P)
B.cereus 37R1Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. hereward grown in a plot in which the previous crop was wheat (Triticum aestivum) var. hereward]UK, England, RothamstedMLST(P)
B.c_group D28-3.B.iSoil (2006)UKMLST(P)
B.cereus 37R6Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. hereward grown in a plot in which the previous crop was wheat (Triticum aestivum) var. hereward]UK, England, RothamstedMLST(P)
B.cereus 32R3Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. cadenza grown in a plot in which the previous crop was wheat (Triticum aestivum) var. hereward]UK, England, RothamstedMLST(P)
B.c_group D28-13.b.iSoil (2006)UKMLST(P)
B.c_group 9304Food (2004)UK, England, BristolMLST(P)
B.mycoides B0518  MLST(P)
B.c_group B951  MLST(P)
B.c_group PL15Soil MLST(P)
B.c_group E5i6Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)

11 isolate(s) sharing typing data in supercluster 21

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StrainSourceLocationShared Typing Data
B.cereus AFS012491Plant, Core Other Plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis JM-Mgvxx-63Other, oil-contaminated mangrove sediment (2013)Brazil, Sao Paulo, BertiogaMLST(TH, H, K, P, clpc, dinb, gdpd, yhfl)
B.cereus AFS085114Plant, Core Other Plant (2014)USA, North CarolinaMLST(H, K, clpc, dinb, gdpd, glpf, gmk, ilvd, panc, purf, pyca2, tpi)
B.thuringiensis BA04Soil (2013)India, AssamMLST(TH, H, CS, gyrb, ilvd, muts, pyca1, rpob, tpi)
B.thuringiensis HS18-1Soil (2009)China, Sichuan ProvinceMLST(H, clpc, gdpd, glpf, gmk, mdh, muts, purf, pyca1, pyca2, rpob, tpi)
B.cereus RIVMBC964Food, kebab (2002)NetherlandsMLST(H, clpc, glpf, gyrb, mdh, muts, panc, purh, pyca1, pyca2, rpob)
B.thuringiensis AFS065400Soil (2014)USA, New YorkMLST(H, clpc, gdpd, glpf, gyrb, ilvd, muts, pyca2, rpob, tpi)
B.cereus S6646Soil (2007)USA, Maryland, RockvilleMLST(P)
B.thuringiensis KBAD4Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBAD6Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBAD1Soil, Forest soil (2000)France, VersaillesMLST(CS)

141 isolate(s) sharing typing data in supercluster 22

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StrainSourceLocationShared Typing Data
B.thuringiensis HD542Animal, insectUSAAFLP2 AFLP3 MLST(TH, H, K, CS, P)
B.thuringiensis HD600Animal, Insect, silkworm (2007)JapanAFLP2 MLST(TH, H, K, CS, P)
B.thuringiensis BGSC4C1Animal, Insect, silkworm (Bombyx mori) (1987) [two complete genomes sequenced for this strain with identical MLST sequences]CzechoslovakiaAFLP2 MLST(TH, H, K, CS, P)
B.thuringiensis Lr7/2Other, Water (2011)Chile, Lirima thermal springsMLST(TH, H, K, CS, P)
B.thuringiensis L-7601(2015)China, TianjinMLST(TH, H, K, CS, P)
B.thuringiensis AFS066483Plant, Corn leaf (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS070359Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis WBt-2Soil (2003)China, Hebei, BaodingMLST(TH, H, K, CS, P)
B.c_group TIAC219Food MLST(TH, H, K, CS, P)
B.thuringiensis AFS046081Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS018331Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS056670Plant, Corn grainbin dust (2013)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS023096Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4AA1Soil (1987) [originally classified as B.thuringiensis tenebrionis; two complete genomes sequenced for this strain with identical MLST sequences]UKMLST(TH, H, K, CS, P)
B.thuringiensis AFS036437Food, Mushroom (2013)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS055470Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS054059Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS054136Plant, Corn grainbin dust (2013)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS059859(2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS086178(2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS065825Plant, Soybean root (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS029508Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS002494Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS095989Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS094730Plant, Soybean leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS030095Plant, Soybean root (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS093126Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS040661Plant, Corn leaf (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS066671Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4BR1Animal, Insect, Black Arches/Nun Moth (Lymantria monacha) larvaeDenmarkMLST(TH, H, K, CS, P)
B.thuringiensis AFS064999Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS046545Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS090355Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis HD12Soil (2012)USAMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4M3#2Animal, Insect, silkworm (Bombyx mori) (2013) [two complete genomes sequenced for this strain with different MLST sequences and origins; strain sequenced by Biology and Biochemistry, University of Bath, England, UK; sequences conflicting with isolate BGSC4M3#1]UKMLST(TH, H, K, CS, P)
B.thuringiensis AFS000517Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.c_group SchrouffFood MLST(TH, H, K, CS, P)
B.c_group VD022Other, Water from a small pond siteBelgiumMLST(TH, H, K, CS, P)
B.thuringiensis AFS032723Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS095482Other, excrement (2014)USA, IowaMLST(TH, H, K, CS, P)
B.c_group K-5975cFood MLST(TH, H, K, CS, P)
B.thuringiensis AFS004356Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS050333Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4AK1(1994)Korea (South)MLST(TH, H, K, CS, P)
B.thuringiensis BGSC4K1Animal, Insect, silkworm (Bombyx mori) (2013)UKMLST(TH, H, K, CS, P)
B.thuringiensis AFS019758Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS053027Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS043402Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS061760Plant, Corn (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4C3Animal, Insect, silkworm (Bombyx mori)FranceMLST(TH, H, K, CS, P)
B.thuringiensis AFS015413Plant, Corn grainbin dust (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS076262Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS022028Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS055421Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus G9842Human, faeces/stools (1996) [from the same food poisoning outbreak as isolates G9843 and G9844; human diarrhea]USA, NebraskaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4R1[Wild type isolate] MLST(TH, H, K, CS, P)
B.thuringiensis HD771  MLST(TH, H, K, CS, P)
B.thuringiensis AFS043499Plant, Soybean root (2013)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS054440Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS075396Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS022064Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.c_group MSX-A1  MLST(TH, H, K, CS, P)
B.thuringiensis AFS066485Food, Mushroom (2013)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis YBT-032SoilChinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS053994Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS016611Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS040987Plant, Soybean root (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS042804Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS031210Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS053253Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS050550Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.thuringiensis AFS075683Animal, earthworm (2013)USA, MinnesotaMLST(TH, H, CS, P, gyrb, mbl, mdh, muts, rpob)
B.thuringiensis AFS007900Plant, Soybean core (2014)USA, IowaMLST(TH, K, CS, P, ftsa, pyre, recf)
B.thuringiensis BGSC4E3[Wild type isolate]UKMLST(K, CS, P, ccpa, ftsa, glpt, pyre, recf, succ)
B.thuringiensis T04001 CanadaMLST(H, K, CS, gmk, ilvd, pta, purh, pyca2, tpi)
B.thuringiensis DAR81934#2[exhibits molluscicidal activity toward the pest snail Cernuella virgata; two complete genomes sequenced for this strain with different MLST sequences; strain sequenced by Joint Genome Institute, Walnut Creek, California, USA; sequences conflicting with isolate DAR81934#1]Australia, Port Campbell National ParkMLST(TH, H, CS, P, gyrb, mbl, mdh, muts, rpob)
B.thuringiensis AFS017371(2014)USA, IowaMLST(TH, H, K, P, dinb, gdpd, purf, yhfl)
B.cereus MOD1Bc143Food, Hybrid Tilapia (2006)USA, MarylandMLST(TH, H, P, clpc, dinb, gdpd, gyrb, mbl, muts, pyca1, rpob, yhfl)
B.thuringiensis DAR81934#1[exhibits molluscicidal activity toward the pest snail Cernuella virgata; two complete genomes sequenced for this strain with different MLST sequences; strain sequenced by School of Agricultural and Wine Sciences, Charles Sturt University, Wagga Wagga, New South Wales, Australia; sequences conflicting with isolate DAR81934#2]Australia, Port Campbell National ParkMLST(TH, CS, P, ftsa, gyrb, mbl, mdh, muts, recf, rpob, succ)
B.thuringiensis BGSC4BS1SoilSpainMLST(TH, H, CS, P, gyrb, mbl, muts, rpob)
B.thuringiensis BGSC4BZ1Soil, black soilChinaMLST(TH, H, P, clpc, dinb, gdpd, gyrb, mdh, muts, rpob, yhfl)
B.c_group HuB4-4SoilBelgiumMLST(TH, CS, P, ftsa, gyrb, mbl, mdh, muts, pyre, rpob)
B.thuringiensis AFS089089Plant, Corn grainbin dust (2013)USA, IowaMLST(P, adk, ccpa, clpc, dinb, ftsa, gdpd, glpt, gyrb, mdh, muts, pyca1, recf, rpob, yhfl)
B.thuringiensis AFS049207Other, excrement (2014)USA, IowaMLST(TH, P, clpc, gdpd, gyrb, muts, purf, pyca1, rpob, succ, yhfl)
B.thuringiensis IBL273Soil (1983) [bears Photorhabdus/Yersinia-like toxin genes]USA, WyomingMLST(P)
B.thuringiensis BGSC4K5  MLST(P)
B.thuringiensis T08023(1987)BrazilMLST(P)
B.thuringiensis T08012Animal, Insect, silkworm (Bombyx mori) (1980)PakistanMLST(P)
B.thuringiensis T04016Animal, Insect, silkworm (Bombyx mori) (1980)PakistanMLST(P)
B.thuringiensis T10018Animal, Insect, silkworm (Bombyx mori) (1982)JapanMLST(P)
B.thuringiensis IBL3579Soil (1983) [bears Photorhabdus/Yersinia-like toxin genes]USA, New YorkMLST(P)
B.cereus B06_032HumanFranceMLST(TH)
B.thuringiensis T08001(1963)USAMLST(P)
B.thuringiensis T04024(1981)PakistanMLST(P)
B.thuringiensis LFB1588Dairy products, pasteurized whole milk (2011)BrazilMLST(TH)
B.thuringiensis IBL122Soil (1983) [bears Photorhabdus/Yersinia-like toxin genes]USA, WyomingMLST(P)
B.thuringiensis IBL500Soil (1986) [bears Photorhabdus/Yersinia-like toxin genes]NorwayMLST(P)
B.thuringiensis 2810-S-16Plant, leaves of clover (Trifolium hybridum) (2004)UKMLST(P)
B.cereus G9844Human, faeces/stools (1996) [from the same food poisoning outbreak as isolates G9842 and G9843]USA, NebraskaMLST(P)
B.thuringiensis T04002(1965) [sequences conflicting with isolate BGSC4E6]CanadaMLST(P)
B.thuringiensis 4btt USAMLST(P)
B.cereus G9843Human, faeces/stools (1996) [from the same food poisoning outbreak as isolates G9842 and G9844]USA, NebraskaMLST(P)
B.thuringiensis IBL1410Other, Novodor bio-insecticide from Mycogen (1994)USA, California, San DiegoMLST(P)
B.thuringiensis IBL10011[bears Photorhabdus/Yersinia-like toxin genes] MLST(P)
B.c_group 295618Other, heroinUKMLST(TH)
B.thuringiensis IBL10010[bears Photorhabdus/Yersinia-like toxin genes] MLST(P)
B.cereus 3L4Dairy products, milk products (2016)China, Shaanxi ProvinceMLST(P)
B.c_group FSLK6-0268Dairy products, milk products (2012)USAMLST(P)
B.c_group KW63[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.cereus B06_005Human, woundFranceMLST(TH)
B.thuringiensis 169-S-16Plant, leaves of clover (Trifolium hybridum) (2004)UKMLST(P)
B.thuringiensis IBL3090Soil (1983) [bears Photorhabdus/Yersinia-like toxin genes]USA, New YorkMLST(P)
B.c_group KW27[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.thuringiensis BGSC4M2 UK, EnglandMLST(P)
B.thuringiensis T10017Soil (1982)USAMLST(P)
B.thuringiensis T08009#1(1979) [sequences conflicting with isolate T08009#2]USAMLST(P)
B.c_group KW55[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.c_group FSLW7-1101Dairy products, milk products (2010)USAMLST(P)
B.thuringiensis T08031Other, lake sediments (1991)BrazilMLST(P)
B.thuringiensis 127-S-3Plant, leaves of clover (Trifolium hybridum) (2004)UKMLST(P)
B.c_group 295171Human, bloodUKMLST(TH)
B.cereus BC_14Food, egg product (2006)Italy (Southern)MLST(P)
B.thuringiensis T10001(1967)GermanyMLST(P)
B.c_group FSLW7-1334Human, faeces/stools (2011)USAMLST(P)
B.c_group BGSC4Q4[Wild type isolate] MLST(P)
B.thuringiensis IBL747Soil (1983) [bears Photorhabdus/Yersinia-like toxin genes]USA, New YorkMLST(P)
B.thuringiensis IBL275Soil (1983) [bears Photorhabdus/Yersinia-like toxin genes]USA, WyomingMLST(P)
B.thuringiensis IBL3476SoilUSA, MarylandMLST(P)
B.thuringiensis 286-S-6Plant, leaves of clover (Trifolium hybridum) (2004)UKMLST(P)
B.thuringiensis T15001Soil (1983)USA, North DakotaMLST(P)
B.cereus HF31Food (2015)Germany, BerlinMLST(P)
B.thuringiensis 158-S-3Plant, leaves of clover (Trifolium hybridum) (2004)UKMLST(P)
B.thuringiensis HD520Animal, Insect, House mosquito (Culex pipiens) larvae AFLP2
B.thuringiensis HD776  AFLP2
B.thuringiensis HD265Animal, Insect, Lesser Wax moth (Achroia grisella)UK, EnglandAFLP2
B.thuringiensis HD775  AFLP2
B.thuringiensis HD597Other, silkworm farmJapanAFLP2
B.thuringiensis INRALM1523ASoil from an island AFLP3
B.thuringiensis HD266  AFLP2
B.thuringiensis INRALM1573Soil from an island AFLP3
B.thuringiensis HD115  AFLP2

22 isolate(s) sharing typing data in supercluster 23

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StrainSourceLocationShared Typing Data
B.c_group WSBC10311[B.cereus or B.weihenstephanensis]Germany, WeihenstephanAFLP3 MLST(TH, H, K, CS, P)
B.wiedmannii AFS054563Plant, Corn leaf (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.wiedmannii AFS064159Plant, Weed leaf (2014)USA, OhioMLST(TH, H, K, CS, P)
B.wiedmannii AFS057498Plant, Weed plant (2014)USA, IndianaMLST(TH, H, K, CS, P)
B.wiedmannii AFS071466Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.c_group BAG6X1-1SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.wiedmannii AFS028955Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.wiedmannii AFS026476(2014)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS090430Plant, Corn grainbin dust (2013)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS078926Plant, Soybean core (2014)USA, IowaMLST(TH, K, CS, P, ftsa, recf, succ)
B.wiedmannii AFS063338Soil (2014)USA, IowaMLST(TH, K, CS, P, pyre, recf, succ)
B.wiedmannii AFS064408Other, excrement (2014)USA, IowaMLST(TH, H, CS, P, gyrb, mbl, mdh, pyca1, rpob)
B.cereus FSLM8-0091Dairy products, raw milk (2012)USAMLST(TH, H, K, P, clpc, dinb, purf, yhfl)
B.wiedmannii AFS072284Plant, Soybean leaf (2014)USA, IllinoisMLST(TH, K, CS, ftsa, gmk, purh, pyre, recf, tpi)
B.wiedmannii AFS056359Plant, Weed plant (2014)USA, IndianaMLST(TH, H, P, dinb, gdpd, gyrb, mbl, mdh, muts, purf, pyca1, yhfl)
B.wiedmannii AFS002707Plant, Soybean leaf (2014)USA, IllinoisMLST(K, CS, P, adk, ftsa, glpt, recf, succ)
B.thuringiensis GOE6#1Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(CS, P, ccpa, ftsa, glpt, gyrb, mdh, muts, pyca1, pyre, recf, rpob, succ)
B.c_group BAG2X1-2SoilUSA, Massachusetts, BostonMLST(K, CS, adk, ccpa, ftsa, glpf, glpt, gmk, ilvd, pta, purh, recf, tpi)
B.c_group PL24Soil MLST(P)
B.c_group PL16Soil MLST(P)
B.thuringiensis PLBB18/1Soil (2012)PolandMLST(P)
B.cereus INRABSFood, raw zucchini AFLP3

25 isolate(s) sharing typing data in supercluster 24

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StrainSourceLocationShared Typing Data
B.thuringiensis IBL3708Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3712Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3761Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3759Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3713Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3690Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3688Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3731Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3692Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3700Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3726Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3715Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3801Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3691Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3724Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3716Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3686Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3684Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3802Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3694Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3717Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3709Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3728Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3714Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3687Soil (2009)USA, MarylandMLST(P)

26 isolate(s) sharing typing data in supercluster 25

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StrainSourceLocationShared Typing Data
B.wiedmannii AFS056211Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS052086Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS075437Other, excrement (2014)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS024711Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.wiedmannii AFS025735Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.wiedmannii AFS036771Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.wiedmannii AFS021943Plant, Soybean leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS027918Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS002508Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS067814Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.wiedmannii AFS030115Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS008930Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.wiedmannii AFS061181Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS086460Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.wiedmannii AFS089520Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.wiedmannii AFS024024Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, gmk, ilvd, purh)
B.wiedmannii AFS078153Animal, earthworm (2013)USA, MinnesotaMLST(H, K, P, clpc, dinb, gdpd, purf, yhfl)
B.wiedmannii AFS005864Plant, Corn (2014)USA, MinnesotaMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.wiedmannii AFS042581Animal, earthworm (2013)USA, MinnesotaMLST(H, K, CS, glpf, gmk, ilvd, pta, purh, tpi)
B.wiedmannii AFS015207Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, P, clpc, dinb, purf, yhfl)
B.wiedmannii AFS032503Soil (2014)USA, New YorkMLST(TH, K, CS, P, ftsa, pyre, recf)
B.wiedmannii AFS070572Plant, Soybean root (2014)USA, IowaMLST(TH, H, K, CS, gmk, ilvd, purh)
B.wiedmannii AFS038776Animal, earthworm (2013)USA, MinnesotaMLST(H, K, clpc, dinb, gdpd, glpf, gmk, ilvd, pta, purf, purh, pyca2, yhfl)
B.wiedmannii AFS089424Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, clpc, dinb, ilvd, purf, purh, yhfl)
B.wiedmannii AFS053236Plant, Corn root (2014)USA, IowaMLST(K, adk, clpc, dinb, ftsa, gdpd, glpf, glpt, gmk, ilvd, purf, purh, pyca2, pyre, recf, succ, tpi, yhfl)
B.c_group AR14-5Soil (2012)ArgentinaMLST(P)

64 isolate(s) sharing typing data in supercluster 26

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StrainSourceLocationShared Typing Data
B.thuringiensis T01001Animal, Insect, Mediterranean flour moth/mill moth (Ephestia kuhniella/Anagasta kuehniella) (1958)CanadaMLST(TH, H, K, CS, P)
B.thuringiensis AFS097514Plant, Soybean leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS073530Plant, Soybean leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS030961Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4A3Animal, Insect, silkworm (Bombyx mori) (2013)UKMLST(TH, H, K, CS, P)
B.thuringiensis AFS098336Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS057829Plant, Wheat plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis ATCC10792#3Animal, Insect, Mediterranean flour moth/mill moth (Ephestia kuhniella/Anagasta kuehniella) [three complete genomes sequenced for this strain with different sequences and origins; strain sequenced by Biological Defense Research Directorate (BDRD), Rockville, Maryland, USA; sequences conflicting with isolates ATCC10792#1 and ATCC10792#2]IsraelMLST(TH, H, K, CS, P)
B.thuringiensis NA205-3Other, dust from maize siloSpainMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4A4Animal, Insect, tobacco moth/cacao moth/warehouse moth (Ephestia elutella)UK, EnglandMLST(TH, H, K, CS, P)
B.thuringiensis IS5056Soil (2005)Poland, Biebrza National ParkMLST(TH, H, K, CS, P)
B.thuringiensis AFS040438Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis CT-43 ChinaMLST(TH, H, K, CS, P)
B.thuringiensis T01328Soil (1994)Brazil, Sao Paulo, Cubatao countyMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4BP1Soil, sesame fieldKorea (South)MLST(TH, H, K, CS, P)
B.thuringiensis BGSC4BN1Food, beansChinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS052794Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS047495Plant, Corn (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS082247Plant, Corn leaf (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS039774Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS010823Plant, Soybean leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS081620Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS077661Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS094706(2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis Bt407[Pasteur Institute; well studied isolate that has been cured of the plasmid that encodes the insecticidal crystal toxin; three complete genomes sequenced for this strain with identical MLST sequences]France, ParisMLST(TH, H, K, CS, P)
B.thuringiensis AFS052676Plant, Soybean leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS099505Plant, Soybean core (2014)USA, IowaMLST(H, K, P, clpc, dinb, gdpd, purf, yhfl)
B.thuringiensis AFS038158Plant, Soybean root (2013)USA, MinnesotaMLST(TH, H, CS, P, gyrb, mbl, mdh, muts, rpob)
B.thuringiensis AFS057784Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, gmk, ilvd, purh)
B.thuringiensis AFS060060Plant, Soybean core (2014)USA, IowaMLST(TH, H, CS, gmk, gyrb, mdh, muts, purh, pyca1, rpob, tpi)
B.thuringiensis ATCC10792#2Animal tissue (1946) [three complete genomes sequenced for this strain with different sequences and origins; strain sequenced by School of Applied Biosciences, Kyungpook National University, Daegu, South Korea; sequences conflicting with isolates ATCC10792#1 and ATCC10792#3]USAMLST(TH, K, P, clpc, dinb, ftsa, gdpd, purf, recf, succ)
B.thuringiensis AFS099341Plant, Corn leaf (2014)USA, IllinoisMLST(H, K, CS, glpf, gmk, purh, pyca2, tpi)
B.thuringiensis AFS007186Plant, Corn leaf (2014)USA, IllinoisMLST(H, K, CS, glpf, gmk, ilvd, purh, pyca2)
B.thuringiensis ATCC10792#1[three complete genomes sequenced for this strain with different sequences and origins; strain sequenced by Department of Food Science and Biotechnology College of Biotechnology and Bioscience, Kangwon National University, Chunchon, South Korea; sequences conflicting with isolates ATCC10792#2 and ATCC10792#3] MLST(P, ccpa, dinb, ftsa, gdpd, glpt, gyrb, mbl, mdh, muts, panc, purf, pyca1, pyre, recf, succ, yhfl)
B.thuringiensis AFS098506Plant, Corn root (2014)USA, IowaMLST(K, CS, adk, ftsa, glpf, glpt, gmk, ilvd, pta, pyca2, recf, succ, tpi)
B.thuringiensis AFS011848Plant, Soybean core (2014)USA, IowaMLST(TH, H, clpc, gdpd, gmk, gyrb, ilvd, mbl, mdh, muts, rpob, tpi, yhfl)
B.thuringiensis AFS058254Plant, Soybean leaf (2014)USA, MinnesotaMLST(K, P, clpc, ftsa, glpt, panc, purf, pyre, recf, succ, yhfl)
B.thuringiensis AFS001991Plant, Corn leaf (2014)USA, IllinoisMLST(TH, H, CS, gyrb, mbl, mdh, purh, rpob)
B.thuringiensis T01058(1964)SwitzerlandMLST(P)
B.thuringiensis BGSC4A2[Wild type isolate] MLST(P)
B.thuringiensis BGSC4A1#2(1915) [Wild type isolate; sequences conflicting with isolate BGSC4A1#1] MLST(P)
B.thuringiensis T01015(1962)BulgariaMLST(P)
B.thuringiensis BGSC4D3[Wild type isolate] MLST(P)
B.thuringiensis BGSC4A8  MLST(P)
B.thuringiensis BGSC4A6[Wild type isolate] MLST(P)
B.thuringiensis BGSC4A1#1(1915) [Wild type isolate; sequences conflicting with isolate BGSC4A1#2] MLST(P)
B.thuringiensis IBL425Soil (1983)USA, New YorkMLST(P)
B.thuringiensis T01022Animal, earthworm/redworm (Eisenia foetida) (1964)USAMLST(P)
B.thuringiensis BGSC4A7[acrystalliferous] MLST(P)
B.c_group DVM_30SoilJapanMLST(P)
B.thuringiensis T01326Soil (1994)ChileMLST(P)
B.c_group KW33[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.thuringiensis BGSC4A5 CzechoslovakiaMLST(P)
B.thuringiensis KBBF3Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBB7Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBB5Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBB8Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBF4Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBB6Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBF2Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBF6Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBE5Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBB4Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBF1Soil, Forest soil (2000)France, VersaillesMLST(CS)

6 isolate(s) sharing typing data in supercluster 27

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StrainSourceLocationShared Typing Data
B.cereus MB.22Food (2014)Germany, MunichMLST(TH, H, K, CS, P)
B.cereus MOD1Bc97Other, Oxytetracycline Medicated Fish Feed (2006)USA, MarylandMLST(TH, H, K, P, clpc, dinb, purf, yhfl)
B.cereus AFS061996(2014)USA, North CarolinaMLST(TH, K, P, clpc, dinb, gdpd, purf)
B.cereus NVH0246/02Food, shrimps (2002) [originally proposed as B.anthracis]ThailandMLST(H)
B.c_group TE7-9Soil (2011)KenyaMLST(P)
B.cereus F5191Human, lung tissue (1983) [from the same patient biopsy as isolate F5190]USA, CaliforniaMLST(P)

39 isolate(s) sharing typing data in supercluster 28

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StrainSourceLocationShared Typing Data
B.thuringiensis IBL3755Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3746Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3745Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3756Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3772Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3758Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3739Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3765Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3762Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3769Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3741Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3718Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3733Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3773Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3735Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3736Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3744Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3768Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3786Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3787Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3775Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3753Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3748Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3774Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3743Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3732Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3784Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3749Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3754Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3734Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3737Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3740Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3764Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3767Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3770Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3752Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3771Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3730Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3750Soil (2009)USA, MarylandMLST(P)

19 isolate(s) sharing typing data in supercluster 29

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StrainSourceLocationShared Typing Data
B.cereus MOD1Bc187Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc177Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc213Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc55Plant, Sesame Seed (2015)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc212Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc210Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus SJ-S2HumanUSA, Tennessee, MemphisMLST(TH, H, K, CS, P)
B.cereus MOD1Bc201Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus AFS099758Plant, Corn (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus MOD1Bc190Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc136Food, Dietary Supplements (2015)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus SJ-S24HumanUSA, Tennessee, MemphisMLST(TH, H, K, CS, P)
B.cereus MOD1Bc184Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc64Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus 16-00191  MLST(TH, H, K, P, clpc, dinb, gdpd, purf)
B.cereus FRI35  MLST(TH, K, CS, P, ftsa, pyre, succ)
B.cereus 143298.BHuman, wound infection (2004)UK, ScotlandMLST(P)
B.cereus FJ15BC328Dairy products, milk products (2015)China, Fujian ProvinceMLST(P)
B.cereus H1548Human, blood (2000) [human septicaemia, fatal]USA, North CarolinaMLST(P)

2 isolate(s) sharing typing data in supercluster 30

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StrainSourceLocationShared Typing Data
B.wiedmannii AFS001911Plant, core (2014)USA, North CarolinaMLST(H, K, CS, gmk, ilvd, pta, pyca2, tpi)
B.wiedmannii AFS057349Plant, core (2014)USA, North CarolinaMLST(H, K, CS, gmk, ilvd, pta, pyca2, tpi)

3 isolate(s) sharing typing data in supercluster 31

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StrainSourceLocationShared Typing Data
B.c_group A3i1Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group A3i3Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group PL17Soil MLST(P)

2 isolate(s) sharing typing data in supercluster 32

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StrainSourceLocationShared Typing Data
B.cereus F3920Human, lung (1982) [human pneumonia]USA, South DakotaMLST(P)
B.cereus G1440Human, lung (1988) [human pneumonia]USA, LouisianaMLST(P)

2 isolate(s) sharing typing data in supercluster 33

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StrainSourceLocationShared Typing Data
B.thuringiensis Bt194 BrazilMLST(P)
B.thuringiensis LFB862Food, black pepper (1994)BrazilMLST(P)

3 isolate(s) sharing typing data in supercluster 34

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StrainSourceLocationShared Typing Data
B.c_group A4i4Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group A4s3Soil (2002)UK, England, BerkshireMLST(P)
B.c_group A3o5Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)

10 isolate(s) sharing typing data in supercluster 35

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StrainSourceLocationShared Typing Data
B.thuringiensis IBL3705Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3704Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3697Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3706Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3698Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3707Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3695Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3699Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3696Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3702Soil (2009)USA, MarylandMLST(P)

4 isolate(s) sharing typing data in supercluster 36

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StrainSourceLocationShared Typing Data
B.thuringiensis BGSC4CC1Soil, grain fieldPakistanMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4CE1SoilAzoresMLST(TH, H, K, CS, P)
B.thuringiensis CEB02/079[Pasteur Institute]France, ParisMLST(H)
B.cereus BGSC6A7#2Other, purified from commercial probiotic BIOSUBTYL DALAT, manufactured in Vietnam [sequences conflicting with isolate BGSC6A7#1] MLST(P)

66 isolate(s) sharing typing data in supercluster 37

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StrainSourceLocationShared Typing Data
B.thuringiensis AFS099677Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS094922Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS076772Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS076861Plant, tree leaf (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS097917Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4AO1(1989)JapanMLST(TH, H, K, CS, P)
B.thuringiensis AFS034818Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS036383Plant, Soybean leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS034600Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS088016Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS081470Plant, Weed plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS056280Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS005140Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS030866Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS065666Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.thuringiensis AFS096960Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS058532Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS045876Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS098170Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS018617Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.thuringiensis AFS058843Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS097325Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS040392Plant, Grass leaf (2013)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS006334Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis IBL200Human, healthy human hand (1985) [israelensis-like serovar; bears Photorhabdus/Yersinia-like toxin genes]USA, MarylandMLST(TH, H, K, CS, P)
B.thuringiensis AFS059039Soil (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS020602Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.thuringiensis AFS024266Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS067808Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4N1Animal, Insect, Greater Wax Moth/Honeycomb Moth (Galleria mellonella)UK, EnglandMLST(TH, H, K, CS, P)
B.thuringiensis AFS025510Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS013213Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS060054Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS011659Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS022086Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.thuringiensis AFS031814Soil (2014)USA, New YorkMLST(TH, H, CS, P, mbl, mdh, muts, pyca1, rpob)
B.thuringiensis AFS041525Plant, core (2014)USA, North CarolinaMLST(TH, K, CS, P, ftsa, pyre, succ)
B.thuringiensis AFS055708Plant, core (2014)USA, North CarolinaMLST(TH, H, K, P, clpc, dinb, gdpd, purf)
B.thuringiensis BGSC4AP1(1989)JapanMLST(TH, H, K, P, clpc, gdpd, purf, yhfl)
B.thuringiensis AFS085829Plant, core (2014)USA, North CarolinaMLST(TH, H, CS, P, mbl, mdh, muts, pyca1, rpob)
B.thuringiensis AFS012085Plant, Corn root (2014)USA, IowaMLST(TH, H, CS, P, gyrb, mbl, mdh, muts, pyca1)
B.thuringiensis AFS086961Soil (2014)USA, New YorkMLST(TH, K, CS, P, ftsa, pyre, succ)
B.cereus FSLK6-0040Dairy products, Laboratory Heat Treated Raw Milk (2012)USA, New YorkMLST(K, CS, P, ccpa, ftsa, glpt, pyre, recf, succ)
B.thuringiensis AFS085496Plant, core (2014)USA, North CarolinaMLST(TH, K, CS, P, ftsa, pyre, recf)
B.thuringiensis AFS006923Soil (2014)USA, North CarolinaMLST(TH, H, K, P, clpc, dinb, gdpd, yhfl)
B.thuringiensis AFS066175Plant, core (2014)USA, North CarolinaMLST(TH, H, K, P, clpc, dinb, gdpd, yhfl)
B.thuringiensis AFS034546Plant, Soybean root (2014)USA, MinnesotaMLST(K, CS, P, adk, ftsa, pyre, recf, succ)
B.thuringiensis AFS036336Plant, core (2014)USA, North CarolinaMLST(K, CS, adk, ccpa, ftsa, glpt, gmk, ilvd, pta, purh, pyca2, pyre, recf, tpi)
B.thuringiensis AFS085011Plant, core (2014)USA, North CarolinaMLST(TH, H, CS, gmk, gyrb, mbl, mdh, purh, pyca1, rpob, tpi)
B.thuringiensis AFS019518Plant, Soybean core (2014)USA, IowaMLST(CS, P, ccpa, ftsa, glpt, gyrb, muts, pyca1, pyre, recf, rpob, succ)
B.thuringiensis AFS057244Soil (2014)USA, New YorkMLST(K, CS, adk, ccpa, ftsa, pta, purh, pyca2, pyre, recf, succ, tpi)
B.thuringiensis IBL1115Soil (1986) [bears Photorhabdus/Yersinia-like toxin genes]IcelandMLST(P)
B.thuringiensis IBL90Soil (1987) [bears Photorhabdus/Yersinia-like toxin genes]USA, WyomingMLST(P)
B.thuringiensis IBL26Soil (1987) [bears Photorhabdus/Yersinia-like toxin genes]USA, WisconsinMLST(P)
B.thuringiensis IBL950Soil (1983) [bears Photorhabdus/Yersinia-like toxin genes]USA, North CarolinaMLST(P)
B.thuringiensis IBL1140Soil (1986) [bears Photorhabdus/Yersinia-like toxin genes]NorwayMLST(P)
B.thuringiensis IBL3790Soil (2009)USA, MarylandMLST(P)
B.c_group KW10[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.thuringiensis IBL888Soil (1986) [bears Photorhabdus/Yersinia-like toxin genes]IcelandMLST(P)
B.thuringiensis IBL110Soil (1983) [bears Photorhabdus/Yersinia-like toxin genes]USA, New YorkMLST(P)
B.thuringiensis IBL3788Soil (2009)USA, MarylandMLST(P)
B.c_group KW37[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.thuringiensis K14_5790(2014)Korea (South)MLST(P)
B.thuringiensis IBL54Soil (1987) [bears Photorhabdus/Yersinia-like toxin genes]USA, MontanaMLST(P)
B.thuringiensis IBL3789Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL61Soil (1987) [bears Photorhabdus/Yersinia-like toxin genes]USA, MontanaMLST(P)

18 isolate(s) sharing typing data in supercluster 38

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StrainSourceLocationShared Typing Data
B.weihenstephanensis GOE7#2Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(TH, H, K, CS, P)
B.weihenstephanensis GOE13Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(TH, H, K, CS, P)
B.weihenstephanensis GOE1#2Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(TH, H, K, CS, P)
B.weihenstephanensis GOE6#2Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(TH, H, K, CS, P)
B.weihenstephanensis GOE3#2Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(TH, H, K, CS, P)
B.weihenstephanensis GOE11Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(TH, H, K, CS, P)
B.weihenstephanensis ADRIAI21(1991)FranceMLST(TH, H, K, CS, P)
B.weihenstephanensis GOE4#2Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(TH, H, K, CS, P)
B.weihenstephanensis GOE12Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(TH, H, K, CS, P)
B.weihenstephanensis GOE5#2Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(TH, H, K, CS, P)
B.weihenstephanensis GOE2#2Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.c_group BAG6O-2SoilUSA, Massachusetts, BostonMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.c_group E5i2Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group D10-15.B.iSoil (2006)UKMLST(P)
B.thuringiensis PLBB29/2Soil (2012)PolandMLST(P)
B.c_group A4g4Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group E2i5Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.cereus KBCH8Soil, Forest soil (2000)France, VersaillesMLST(CS)

5 isolate(s) sharing typing data in supercluster 39

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StrainSourceLocationShared Typing Data
B.pseudomycoides AFS070925Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.pseudomycoides AFS018356Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.pseudomycoides AFS009013Plant, Corn leaf (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.pseudomycoides AFS099456Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.pseudomycoides AFS040159Plant, Soybean root (2014)USA, MissouriMLST(TH, K, CS, ftsa, gmk, ilvd, recf, succ, tpi)

2 isolate(s) sharing typing data in supercluster 40

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StrainSourceLocationShared Typing Data
B.thuringiensis HD800  AFLP2
B.thuringiensis HD552  AFLP2

6 isolate(s) sharing typing data in supercluster 41

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StrainSourceLocationShared Typing Data
B.cereus LCT-BC235Other, culture sent to space aboard the Shenzhou-8 spacecraft; isolated after space flight MLST(TH, H, K, CS, P)
B.cereus LCT-BC25Other, culture sent to space aboard the Shenzhou-8 spacecraft; isolated after space flight MLST(TH, H, K, CS, P)
B.cereus LCT-BC244  MLST(TH, H, K, CS, P)
B.cereus TS2Other, Saltern sediment (2014)India, Tamil Nadu, Tuticorin (Thoothukudi)MLST(H, K, P, clpc, dinb, gdpd, purf)
B.cereus MOD1Bc107Other, Oxytetracycline Medicated Fish Feed (2006)USA, MarylandMLST(K, adk, ccpa, clpc, dinb, ftsa, gdpd, gmk, purh, pyca2, recf)
B.cereus 2013-10Dairy products, milk productsChinaMLST(P)

44 isolate(s) sharing typing data in supercluster 42

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StrainSourceLocationShared Typing Data
B.cereus 13061  MLST(TH, H, K, CS, P)
B.cereus WSBC10035Dairy products, pasteurized milk (1993)GermanyMLST(TH, H, K, CS, P)
B.cereus MHI86Food, infant foodGermanyMLST(TH, H, K, CS, P)
B.cereus MOD1Bc138Food, Dietary Supplements (2015)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc224Food, food product (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus B4086Food, boiled rice (2012)NetherlandsMLST(TH, H, K, CS, P)
B.cereus RIVMBC90Human, faeces/stools (1999) [diarrheal food poisoning outbreak]NetherlandsAFLP3 MLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.c_group AND1407Food MLST(TH, H, K, CS, P)
B.cereus MB.1Food (2014)Germany, MunichMLST(TH, H, K, CS, P)
B.cereus MOD1Bc67Other, Powdered Infant Formula (2015)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus F4429/71Food, vanilla pudding (1971) [diarrheal food poisoning outbreak]NetherlandsMLST(TH, H, K, CS, P)
B.cereus MOD1Bc105Other, Oxytetracycline Medicated Fish Feed (2006)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc140Food, Dietary Supplements (2015)USA, MarylandMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4H1Animal, Insect, Prominent moth (Notodonta aniera)Czechoslovakia or USSRMLST(TH, H, K, CS, P)
B.cereus MOD1Bc99Other, Oxytetracycline Medicated Fish Feed (2006)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc119Food, Whole Black Pepper (2015)USA, MarylandMLST(TH, H, K, CS, gmk, ilvd, purh)
B.cereus MB.17Food (2014)Germany, MunichMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.cereus FSLW8-0003Dairy products, Ricotta/mozzarella whey (2012)USA, New YorkMLST(H, K, P, clpc, dinb, gdpd, purf, yhfl)
B.cereus MOD1Bc113Other, Powdered Infant Formula (2015)USA, MarylandMLST(TH, H, K, P, dinb, gdpd, purf, yhfl)
B.c_group MSX-D12  MLST(H, K, CS, gmk, ilvd, pta, purh, pyca2, tpi)
B.cereus AFS076904Plant, Corn root (2013)USA, IowaMLST(TH, P, clpc, dinb, gdpd, gyrb, mdh, muts, purf, pyca1, recf, rpob, succ)
B.cereus H3081.97Food (1997) [emetic toxin/cereulide producer; from the same food poisoning outbreak as isolates H3074.97 and H3076.97; outbreak linked to rice]USA, TexasMLST(P, ccpa, clpc, dinb, ftsa, glpt, gyrb, mbl, mdh, muts, panc, purf, pyca1, pyre, recf, yhfl)
B.cereus CC-1Other, marine sediments (2015)China, Bo Hai, Liaodong Bay, PanjinMLST(CS, adk, ccpa, ftsa, gmk, pta, purh, pyca1, pyca2, pyre, rpob, succ)
B.cereus EGD-AQ9Other, sewage (2016)India, Maharashtra, NagpurMLST(H, gmk, gyrb, ilvd, mdh, pta, purh, pyca1, pyca2, rpob, yhfl)
B.c_group AH840[sequences conflicting with isolate T01001] MLST(TH, H)
B.cereus B06_007Human, cutaneousNorwayMLST(TH)
B.cereus F00/3086Human, neutropenia in child; Public Health Laboratory (2000)UK, England, ChelmsfordMLST(P)
B.cereus BFDA96178Food (2007)Taiwan, Taoyuan countyMLST(P)
B.thuringiensis BGSC4I3 USAMLST(P)
B.cereus NC1276Food, rice (1997) [emetic toxin/cereulide producer]IndiaMLST(P)
B.cereus NC113Other, environmental (1983) [emetic toxin/cereulide producer]JapanMLST(P)
B.cereus B06_003Human, bloodNorwayMLST(TH)
B.cereus NC526Other, environmental (1983) [emetic toxin/cereulide producer]JapanMLST(P)
B.cereus NC610Other, environmental (1990) [emetic toxin/cereulide producer]JapanMLST(P)
B.cereus H3076.97Human, faeces/stools (1997) [emetic toxin/cereulide producer; from the same food poisoning outbreak as isolates H3074.97 and H3081.97; outbreak linked to rice]USA, TexasMLST(P)
B.cereus BC_28Food, ready-to-eat product (2006)Italy (Northwestern)MLST(P)
B.cereus B33  MLST(P)
B.cereus NC111Food, rice (1983) [emetic toxin/cereulide producer]JapanMLST(P)
B.cereus NC1274Human, vomit (1997) [human vomiting, emetic toxin/cereulide producer]IndiaMLST(P)
B.cereus NC-stdFood, rice [emetic toxin/cereulide producer]UKMLST(P)
B.c_group AH1124HumanFranceMLST(TH)
B.cereus HZ12-67Dairy products, milk products (2012)ChinaMLST(P)
B.c_group KW2[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.cereus INRAC24Food, chilled pasteurized carrot (4 degrees C.) (1996)France, VaucluseAFLP3

24 isolate(s) sharing typing data in supercluster 43

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StrainSourceLocationShared Typing Data
B.cereus BDRD-ST24[Biological Defense Research Directorate (BDRD)]USA, Maryland, RockvilleMLST(TH, H, K, CS, P)
B.cereus M13Food, Korean fermented food (2016)Korea (South)MLST(TH, H, K, CS, P)
B.cereus 16-00187  MLST(TH, H, K, CS, P)
B.cereus FSLW8-0824Food, Finished RTE food product (2012)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus 16-00188  MLST(H, K, CS, glpf, gmk, ilvd, purh, pyca2, tpi)
B.cereus SJ-S28HumanUSA, Tennessee, MemphisMLST(K, CS, ccpa, ftsa, glpf, glpt, gmk, pta, purh, pyca2, pyre, recf, succ, tpi)
B.cereus MOD1Bc219Other, Baby Wipes (2016)USA, MarylandMLST(H, CS, glpf, gmk, gyrb, ilvd, mdh, muts, purh, pyca1, pyca2, rpob, tpi)
B.cereus WSBC10028Dairy products, pasteurized milk (1993) [from the same dairy as isolates WSBC10029, WSBC10030, WSBC10031, WSBC10042, WSBC10201, WSBC10204, WSBC10205, WSBC10206, WSBC10208, and WSBC10211]Germany, WeihenstephanMLST(H, P)
B.cereus ATCC12480Animal, sheep rumen MLST(P, mbl, mdh, muts, pyca1, rpob)
B.cereus BC_8Food, egg product (2006)Italy (Southern)MLST(P)
B.cereus NC1272Food, pasta (1993) [human diarrhea]SwitzerlandMLST(P)
B.cereus F4976Human, lung (1983) [human pneumonia]USA, OregonMLST(P)
B.cereus BC_27Food, ready-to-eat product (2006)Italy (Northwestern)MLST(P)
B.cereus Cal3Other, board machine (1998)FinlandMLST(P)
B.cereus NCIB6349(1950) MLST(P)
B.cereus NC1216Dairy products, milk products (1996)JapanMLST(P)
B.cereus BC_37Dairy products, industrial dairy products (2006)Italy (Northeastern)MLST(P)
B.cereus De1Human, blood (2001)ItalyMLST(P)
B.cereus NC478Food (1983)JapanMLST(P)
B.cereus BC_4Food, egg product (2006)Italy (Southern)MLST(P)
B.cereus FP17Food, pasta (2002)ItalyMLST(P)
B.cereus NC392Human, faeces/stools (1982)JapanMLST(P)
B.cereus NC383Human, faeces/stools (1982)JapanMLST(P)
B.cereus NC545Food, rice (1983)JapanMLST(P)

18 isolate(s) sharing typing data in supercluster 44

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StrainSourceLocationShared Typing Data
B.thuringiensis T02001Animal, Insect, forest tent caterpillar moth (Malacosoma disstria) (1958) [two complete genomes sequenced for this strain with identical MLST sequences]USAMLST(TH, H, K, CS, P)
B.thuringiensis YBT-020  MLST(TH, H, K, CS, ilvd, purh, tpi)
B.thuringiensis NCTC4041  MLST(P)
B.thuringiensis BGSC4D2[Wild type isolate] MLST(P)
B.thuringiensis IBL480Soil (1986)SwedenMLST(P)
B.thuringiensis IBL523Soil (1987)USA, CaliforniaMLST(P)
B.thuringiensis IBL3268Soil (1984)NepalMLST(P)
B.thuringiensis IBL535Soil (1988)USA, MarylandMLST(P)
B.thuringiensis IBL3870Soil (1983)USA, WyomingMLST(P)
B.thuringiensis IBL1211Other, snow (1985)USA, MarylandMLST(P)
B.thuringiensis BGSC4B5  MLST(P)
B.thuringiensis IBL1132Soil (1986)NorwayMLST(P)
B.thuringiensis IBL1613Soil (1985)SpainMLST(P)
B.thuringiensis IBL674Soil (1984)IndiaMLST(P)
B.thuringiensis BGSC4B1[Wild type isolate] MLST(P)
B.thuringiensis IBL1489Soil (1985)SpainMLST(P)
B.thuringiensis IBL2408Soil (1985)SpainMLST(P)
B.thuringiensis IBL631Soil (1985)MoroccoMLST(P)

15 isolate(s) sharing typing data in supercluster 45

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StrainSourceLocationShared Typing Data
B.cereus 2000032803Soil (1963) MLST(P)
B.cereus 2002013139  MLST(P)
B.cereus 2002013140  MLST(P)
B.cereus 2002013138  MLST(P)
B.cereus 2002013145  MLST(P)
B.cereus 2002013146  MLST(P)
B.cereus 2000032950  MLST(P)
B.cereus 2000032884  MLST(P)
B.cereus 2000032847  MLST(P)
B.cereus 2000032849  MLST(P)
B.cereus 2000031061  MLST(P)
B.cereus 2000032947  MLST(P)
B.cereus 2000032928  MLST(P)
B.cereus 2000032805  MLST(P)
B.cereus 2000031062  MLST(P)

2 isolate(s) sharing typing data in supercluster 46

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StrainSourceLocationShared Typing Data
B.c_group PL28Soil MLST(P)
B.c_group A3s10Soil (2002)UK, England, BerkshireMLST(P)

120 isolate(s) sharing typing data in supercluster 47

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StrainSourceLocationShared Typing Data
B.cereus F4810/72Human, vomit (1972) [emetic food poisoning outbreak; human vomiting; reference emetic toxin/cereulide producer]UKAFLP2 AFLP3 MLST(TH, H, K, CS, P)
B.cereus NC7401Human, faeces/stools or vomit (1974 or 1994) [human vomiting, emetic food poisoning outbreak, emetic toxin/cereulide producer]JapanAFLP3 MLST(TH, H, K, CS, P)
B.cereus F1-15  MLST(TH, H, K, CS, P)
B.cereus MB.15Food (2014)Germany, MunichMLST(TH, H, K, CS, P)
B.cereus MOD1Bc234Human, faeces/stools (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus HZBCE-09Food, pork (2015)China, HangzhouMLST(TH, H, K, CS, P)
B.cereus MOD1Bc225Human, faeces/stools (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus 16-00174  MLST(TH, H, K, CS, P)
B.cereus 16-00176  MLST(TH, H, K, CS, P)
B.c_group IS075Animal, MammalsPolandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc220Food, food product (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus 16-00183  MLST(TH, H, K, CS, P)
B.cereus HZBCE-01Human, stomach (2015)China, HangzhouMLST(TH, H, K, CS, P)
B.cereus MB.8Food (2014)Germany, MunichMLST(TH, H, K, CS, P)
B.c_group IS845/00Animal, MammalsPolandMLST(TH, H, K, CS, P)
B.c_group MSX-A12  MLST(TH, H, K, CS, P)
B.cereus HZBCE-10Food, pork (2015)China, HangzhouMLST(TH, H, K, CS, P)
B.cereus HZBCE-08Food, Fried fish (2015)China, HangzhouMLST(TH, H, K, CS, P)
B.cereus MB.21Food (2014)Germany, MunichMLST(TH, H, K, CS, P)
B.cereus HZBCE-02Human, stomach (2015)China, HangzhouMLST(TH, H, K, CS, P)
B.cereus BDRD-ST26[Biological Defense Research Directorate (BDRD)]USA, Maryland, RockvilleMLST(TH, H, K, CS, P)
B.cereus B4153Dairy products, milk, (fermented) dairy products and desserts (2012)NetherlandsMLST(TH, H, K, CS, P)
B.cereus B4116Food (2013)NetherlandsMLST(TH, H, K, CS, P)
B.cereus HZBCE-07Food, Fried fish (2015)China, HangzhouMLST(TH, H, K, CS, P)
B.cereus MOD1Bc233Human, faeces/stools (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MB.16Food (2014)Germany, MunichMLST(TH, H, K, CS, P)
B.cereus SJ-S30HumanUSA, Tennessee, MemphisMLST(TH, H, K, CS, P)
B.cereus B4085Food (2013)NetherlandsMLST(TH, H, K, CS, P)
B.cereus NVH0075/95Food, stew with vegetables, food poisoning (1995) (1995) [diarrheal food poisoning outbreak]NorwayMLST(TH, H, K, CS, P)
B.c_group IS195Animal, MammalsPolandMLST(TH, H, K, CS, P)
B.cereus BCE-01Human, stomach (2015)China, HangzhouMLST(TH, H, K, CS, P)
B.cereus B4078(2012)NetherlandsMLST(TH, H, K, P, clpc, dinb, purf, yhfl)
B.cereus MB.20Food (2014)Germany, MunichMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.cereus UBA5641  MLST(H, K, CS, gmk, ilvd, pta, purh, pyca2, tpi)
B.cereus MB.8-1Food (2014)Germany, MunichMLST(TH, H, K, P, clpc, dinb, purf, yhfl)
B.c_group AH817Human, periodontitis (1995)Norway, AkershusMLST(TH, H)
B.cereus F3351/87Human, faeces/stools (1987) [emetic food poisoning outbreak, emetic toxin/cereulide producer]UKAFLP3 MLST(H)
B.cereus IF1-1Food (2014) [emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus WSBC10879Food, rice [emetic toxin/cereulide producer] MLST(H)
B.c_group XA13-312Food, rice (2013)China, Shanxi ProvinceMLST(P)
B.c_group XA13-176Food, rice (2013)China, Shanxi ProvinceMLST(P)
B.cereus E6345Human, lung (1979)USA, New HampshireMLST(P)
B.cereus CR27-3Food, rice (2013) [human vomiting, emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus CR110-1(2013) [human vomiting, emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus B05_010HumanFranceMLST(TH)
B.cereus 2002734478Human, blood (2004) [human septicaemia]USAMLST(P)
B.cereus NC622Other, environmental (1990) [emetic toxin/cereulide producer]JapanMLST(P)
B.cereus H2573.97Food (1997) [emetic toxin/cereulide producer; from the same food poisoning outbreak as isolate H2576.97; outbreak linked to rice]UK, EnglandMLST(P)
B.cereus F665Human, faeces/stools (1981) [emetic toxin/cereulide producer; from the same food poisoning outbreak as isolates F663, F666, and F667; outbreak linked to rice]USA, North CarolinaMLST(P)
B.cereus F3080B/87Food, chicken korma and rice (1987) [human vomiting, emetic food poisoning outbreak, emetic toxin/cereulide producer]UKMLST(P)
B.cereus BGSC6A18[Wild type isolate; USSR Research Institute for Antibiotics] MLST(P)
B.cereus SX15-28Dairy products, milk products (2015)ChinaMLST(P)
B.cereus CR15-1Food, rice (2013) [human vomiting, emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus H2576.97Food (1997) [emetic toxin/cereulide producer; from the same food poisoning outbreak as isolate H2573.97; outbreak linked to rice]UK, EnglandMLST(P)
B.cereus IF60-2Food (2014) [emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus F3942/87Food, boiled rice (1987) [human vomiting, emetic food poisoning outbreak, emetic toxin/cereulide producer]UKMLST(P)
B.cereus NC-I55Human, faeces/stools (1980) [human vomiting, emetic toxin/cereulide producer]JapanMLST(P)
B.cereus NC524Other, environmental (1983) [emetic toxin/cereulide producer]JapanMLST(P)
B.cereus CR62-4Food, rice (2013) [human vomiting, emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus CR27-1Food, rice (2013) [human vomiting, emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus NC199Other, environmental (1979) [emetic toxin/cereulide producer]JapanMLST(P)
B.cereus IF24-2Food (2014) [emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus 192Food, rice (2011)China, Zhejiang ProvinceMLST(TH)
B.cereus F95/9130Other, washing machine water rack, Birmingham Women-s Hospital (1995)UK, England, BirminghamMLST(P)
B.cereus NC1363Human, faeces/stools (2001) [human vomiting, emetic toxin/cereulide producer]JapanMLST(P)
B.cereus H9312Human, vomit (2000) [food poisoning outbreak, emetic toxin/cereulide producer]USA, MinnesotaMLST(P)
B.cereus CR5-1Food, rice (2013) [human vomiting, emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus IH41385Human, Dialysis liquid (1998) [connected to illness, emetic toxin/cereulide producer]FinlandMLST(H)
B.cereus F663Food (1981) [emetic toxin/cereulide producer; from the same food poisoning outbreak as isolates F665, F666, and F667; outbreak linked to rice]USA, North CarolinaMLST(P)
B.cereus IF46-1Food (2014) [emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus H9310Human, vomit (2000) [food poisoning outbreak, emetic toxin/cereulide producer]USA, MinnesotaMLST(P)
B.cereus G0501Food, rice (2005) [human vomiting, emetic toxin/cereulide producer]JapanMLST(P)
B.cereus AK14-66Dairy products, milk products (2014)ChinaMLST(P)
B.cereus SX15-16Dairy products, milk products (2015)ChinaMLST(P)
B.cereus XA12-5Dairy products, milk products (2012)ChinaMLST(P)
B.cereus BFDA96175Food, rice (2007)Taiwan, Taoyuan countyMLST(P)
B.cereus CR43-1Food, rice (2013) [human vomiting, emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus BGSC6A6Other, used in probiotic SUBTYL [proposed as B.cereus var. vietnami or a new species B.vietnami] MLST(P)
B.cereus SX15-22Dairy products, milk products (2015)ChinaMLST(P)
B.cereus B06_008Human, bloodFranceMLST(TH)
B.cereus CR63-3Food, rice (2013) [human vomiting, emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus NC1237Food, rice (1996) [emetic toxin/cereulide producer]JapanMLST(P)
B.cereus H3074.97Human, faeces/stools (1997) [emetic toxin/cereulide producer; from the same food poisoning outbreak as isolates H3076.97 and H3081.97; outbreak linked to rice]USA, TexasMLST(P)
B.c_group XA13-110Food, rice (2013)China, Shanxi ProvinceMLST(P)
B.cereus S710  MLST(P)
B.cereus H9311Food (2000) [food poisoning outbreak, emetic toxin/cereulide producer]USA, MinnesotaMLST(P)
B.cereus SX16-44Dairy products, milk products (2016)ChinaMLST(P)
B.cereus IF5-1Food (2014) [emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus RIVMBC62Human, Vomit (1996) [emetic food poisoning outbreak, emetic toxin/cereulide producer]NetherlandsMLST(H)
B.cereus CBC_99014Human, vomitingJapanMLST(P)
B.cereus IF51-1Food (2014) [emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus IF26-1Food (2014) [emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus B06_018Human, peritonealFranceMLST(TH)
B.cereus F667Human, faeces/stools (1981) [emetic toxin/cereulide producer; from the same food poisoning outbreak as isolates F663, F665, and F666; outbreak linked to rice]USA, North CarolinaMLST(P)
B.cereus S74Food, fried rice MLST(P)
B.cereus NC-G15Human, faeces/stools (1995) [human vomiting, emetic toxin/cereulide producer]JapanMLST(P)
B.thuringiensis IBL1297Soil (1990)USA, MarylandMLST(P)
B.cereus IF7-1Food (2014) [emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.c_group XA13-310Food, rice (2013)China, Shanxi ProvinceMLST(P)
B.cereus NC529Other, environmental (1983) [emetic toxin/cereulide producer]JapanMLST(P)
B.cereus NC1291Dairy products, milk products (1999) [human vomiting, emetic toxin/cereulide producer]JapanMLST(P)
B.cereus BC_7Food, egg product (2006)Italy (Southern)MLST(P)
B.cereus NC541Other, environmental (1983) [emetic toxin/cereulide producer]JapanMLST(P)
B.cereus CR27-2Food, rice (2013) [human vomiting, emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus NC92Human, faeces/stools (1978) [emetic toxin/cereulide producer]JapanMLST(P)
B.cereus IF78-2Food (2014) [emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus SDAGr177aDairy products, raw milk (1998) [emetic toxin/cereulide producer]SwedenMLST(H)
B.cereus CBC_04001Human, vomitingJapanMLST(P)
B.cereus CR24-1Food, rice (2013) [human vomiting, emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.c_group AK16-112Food, rice (2013)China, Shanxi ProvinceMLST(P)
B.cereus NC1247Food, rice (1996) [human vomiting, emetic toxin/cereulide producer]JapanMLST(P)
B.cereus CR73-1Food, rice (2013) [human vomiting, emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus NC444Other, environmental (1982) [emetic toxin/cereulide producer]JapanMLST(P)
B.cereus NC1239Food, rice (1996) [emetic toxin/cereulide producer]JapanMLST(P)
B.cereus BFDA96139Food (2007)Taiwan, Taipei countyMLST(P)
B.cereus NC604Other, environmental (1990) [emetic toxin/cereulide producer]JapanMLST(P)
B.cereus CBC_04003Human, vomitingJapanMLST(P)
B.cereus BFDA96146(2007)Taiwan, Taipei countyMLST(P)
B.cereus MHI1305Food, indian rice dish (2001) [emetic food poisoning outbreak, emetic toxin/cereulide producer]Germany, PassauAFLP3
B.cereus F1-1[Food Research Institute, University of Wisconsin-Madison]USA, Wisconsin, MadisonAFLP2

3 isolate(s) sharing typing data in supercluster 48

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StrainSourceLocationShared Typing Data
B.mycoides WSBC10275Soil AFLP3
B.mycoides INRAS38Soil AFLP3
B.mycoides SDA1R7Soil AFLP3

24 isolate(s) sharing typing data in supercluster 49

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StrainSourceLocationShared Typing Data
B.cereus ATCC10987#1Dairy products, Cheese (1930)CanadaMLST(TH, H, K, CS, P)
B.cereus KS100BcFood service operation (2014)Korea (South), Gyeonggi-doMLST(TH, H, K, CS, P)
B.cereus F3162/04Human, faeces/stools (2004) [clinical isolate] MLST(TH, H, K, CS, P)
B.cereus MOD1Bc111Other, Powdered Infant Formula (2015)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus FSLW8-0050Other, Condensed food product from evaporator (2012)USA, New YorkMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.cereus B06_009Human, cerebrospinal fluid (2008)France, ParisMLST(TH, H, K, P, clpc, dinb, purf, yhfl)
B.c_group MCCC1A06194Other, middle seawater (2009)Pacific OceanMLST(P)
B.c_group MCCC1A06192Other, bottom seawater (2009)Pacific OceanMLST(P)
B.cereus MM_2Food (2003)USAMLST(P)
B.c_group MCCC1A06939Other, bottom seawater (2010)Pacific OceanMLST(P)
B.c_group MCCC1A06182Other, bottom seawater (2009)Pacific OceanMLST(P)
B.cereus BGSC6A40Dairy products, milk products (1998) [sequences conflicting with isolate M21]FinlandMLST(P)
B.c_group MCCC1A06928Other, bottom seawater (2010)Pacific OceanMLST(P)
B.c_group MCCC1A06941Other, middle seawater (2010)Pacific OceanMLST(P)
B.c_group MCCC1A06188Other, sediments (2009)Pacific OceanMLST(P)
B.c_group MCCC1A06940Other, bottom seawater (2010)Pacific OceanMLST(P)
B.c_group MCCC1A06937Other, surface seawater (2010)Pacific OceanMLST(P)
B.c_group MCCC1A06942Other, bottom seawater (2010)Pacific OceanMLST(P)
B.c_group MCCC1A06189Other, bottom seawater (2009)Pacific OceanMLST(P)
B.c_group MCCC1A06191Other, sediments (2009)Pacific OceanMLST(P)
B.cereus B309[German Armed Forces (Bundeswehr) Institute of Microbiology]Germany, MunichMLST(H)
B.cereus BFDA96145Food (2007)Taiwan, Taipei countyMLST(P)
B.c_group MCCC1A06193Other, sediments (2009)Pacific OceanMLST(P)
B.c_group MCCC1A06187Other, surface seawater (2009)Pacific OceanMLST(P)

4 isolate(s) sharing typing data in supercluster 50

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StrainSourceLocationShared Typing Data
B.thuringiensis BGSC4AY1Food, black pepper powderBrazilMLST(P)
B.thuringiensis BGSC4XX1  MLST(P)
B.thuringiensis BGSC4XX2  MLST(P)
B.thuringiensis BGSC4XX3Animal, Insect, dead larvaArgentinaMLST(P)

31 isolate(s) sharing typing data in supercluster 51

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StrainSourceLocationShared Typing Data
B.thuringiensis HD1002Other, SewageIsraelAFLP2 MLST(TH, H, K, CS, P)
B.thuringiensis HD789  AFLP2 MLST(TH, H, K, CS, P)
B.thuringiensis BR58Plant, stored grain (2000)Brazil, LondrinaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4Q1Animal, Insect, Culicidae (Mosquitoes) larvae (1977) [two complete genomes sequenced for this strain with identical MLST sequences]IsraelMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4AX1SoilUSSRMLST(TH, H, K, CS, P)
B.thuringiensis UBA3967  MLST(TH, H, K, CS, P)
B.thuringiensis 147Soil (2014)Brazil, Tocantins StateMLST(TH, H, K, CS, P)
B.thuringiensis IBL4222Animal, cat-s paw (1985) [israelensis-like serovar]USA, MarylandMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4Q7Soil (1976) [plasmid-cured; acrystalliferous; widely used as a recombination host]IsraelMLST(TH, H, K, CS, P)
B.thuringiensis ATCC35646Other, raw sewage pond (1977)Israel, Kibbutz HuldaMLST(CS, adk, ccpa, ftsa, glpt, gmk, ilvd, mbl, muts, pta, purh, pyca1, pyca2, pyre, recf, rpob)
B.thuringiensis T05a030Soil (1987)IraqMLST(P)
B.thuringiensis IBL184Soil (1986)USA, Washington D.C.MLST(P)
B.thuringiensis IBL431Soil (1985)SpainMLST(P)
B.thuringiensis IBL3241Soil (1986)NorwayMLST(P)
B.thuringiensis IBL439Soil (1985)MoroccoMLST(P)
B.thuringiensis IBL621Soil (1987)EgyptMLST(P)
B.thuringiensis BGSC4Q3Animal, Insect, Culicidae (Mosquitoes)IsraelMLST(P)
B.thuringiensis T08025Other, grain silo dust (1988)FranceMLST(P)
B.thuringiensis IBL416Soil (1985)ChinaMLST(P)
B.thuringiensis IBL117Soil (1983)USA, WyomingMLST(P)
B.thuringiensis DSM5815Soil, sandy loam garden soilUSAMLST(P)
B.thuringiensis CCCT2259(1993)BrazilMLST(P)
B.thuringiensis KBBG5Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBD7Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBG4Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBD6Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBC1Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBE4Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis HD799  AFLP2
B.thuringiensis HD795  AFLP2
B.thuringiensis HD1008  AFLP2

2 isolate(s) sharing typing data in supercluster 52

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StrainSourceLocationShared Typing Data
B.cereus S6616Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6570aSoil (2007)USA, Maryland, RockvilleMLST(P)

2 isolate(s) sharing typing data in supercluster 53

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StrainSourceLocationShared Typing Data
B.toyonensis AFS015017Plant, Corn core (2014)USA, IllinoisMLST(CS, P, ccpa, ftsa, glpt, gyrb, mdh, muts, pyca1, succ)
B.toyonensis AFS071669Plant, Corn core (2014)USA, IllinoisMLST(CS, P, ccpa, ftsa, glpt, gyrb, mdh, muts, pyca1, succ)

2 isolate(s) sharing typing data in supercluster 54

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StrainSourceLocationShared Typing Data
B.cereus 140099.DHuman, wound infection (2005)UK, ScotlandMLST(P)
B.cereus SPS2Other, kaolin (1999) MLST(P)

2 isolate(s) sharing typing data in supercluster 55

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StrainSourceLocationShared Typing Data
B.cereus Bc219 BrazilMLST(P)
B.cereus LFB1131Animal, InsectCzechoslovakiaMLST(P)

11 isolate(s) sharing typing data in supercluster 56

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StrainSourceLocationShared Typing Data
B.wiedmannii AFS011149Plant, Soybean leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS074234Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.wiedmannii AFS079268Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS009340Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS024429Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.wiedmannii AFS013151Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS000938Plant, Corn core (2014)USA, IllinoisMLST(TH, H, CS, P, gyrb, mbl, mdh, muts, rpob)
B.wiedmannii AFS029838Plant, Corn core (2014)USA, IllinoisMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.wiedmannii AFS064234Plant, Soybean core (2014)USA, IowaMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.wiedmannii AFS023251Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, P, clpc, dinb, gdpd, yhfl)
B.wiedmannii AFS034073Plant, Soybean core (2014)USA, IowaMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)

10 isolate(s) sharing typing data in supercluster 57

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StrainSourceLocationShared Typing Data
B.thuringiensis IBL3780Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3785Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3729Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3776Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3689Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3760Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3725Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3779Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3719Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3781Soil (2009)USA, MarylandMLST(P)

8 isolate(s) sharing typing data in supercluster 58

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StrainSourceLocationShared Typing Data
B.cereus HWW274-2Dairy products, Milk powder (2004)GermanyMLST(TH, H, K, CS, P)
B.cereus FSLW8-0275Dairy products, Raw liquid milk and whey perm (2012)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus B4087Food, pea soup (2012)NetherlandsMLST(TH, H, K, P, dinb, gdpd, purf, yhfl)
B.c_group HZ15-64Food, rice (2016)China, Shanxi ProvinceMLST(P)
B.cereus HZ15-Y105Food, pasta (2015)China, Shaanxi ProvinceMLST(P)
B.cereus 2012-41Dairy products, milk productsChinaMLST(P)
B.cereus HZ15-Y066Food (2015)China, Shaanxi ProvinceMLST(P)
B.cereus HZ15-Y064Food (2015)China, Shaanxi ProvinceMLST(P)

20 isolate(s) sharing typing data in supercluster 59

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StrainSourceLocationShared Typing Data
B.wiedmannii FSLM7-0938Dairy products, raw milk (2011)USA, New YorkMLST(TH, H, K, CS, P)
B.wiedmannii FSLH8-0032Dairy food in process (2005)USA, New YorkMLST(TH, H, K, CS, P)
B.wiedmannii AFS052419Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.wiedmannii FSLH7-0353Food, finished ready-to-eat dairy food product (2005)USA, New YorkMLST(TH, H, K, CS, P)
B.wiedmannii FSLM7-1251Dairy products, raw milk (2011)USA, New YorkMLST(TH, H, K, CS, P)
B.wiedmannii FSLW8-0169Dairy products, Raw milk (2012)USA, New YorkMLST(H, CS, glpf, gmk, gyrb, ilvd, mdh, muts, purh, pyca1, pyca2, rpob, tpi)
B.wiedmannii MOD1Bc223Food, food product (2016)USA, MarylandMLST(K, CS, P, adk, ftsa, glpt, recf, succ)
B.cereus KPR-7A  MLST(TH, H, CS, gmk, gyrb, ilvd, mdh, muts, pyca1, rpob, tpi)
B.c_group BAG5X2-1SoilUSA, Massachusetts, BostonMLST(TH, H, CS, gyrb, ilvd, mdh, muts, purh, pyca1, rpob, tpi)
B.wiedmannii FSLM7-0044Dairy products, raw milk (2011)USA, New YorkMLST(TH, H, K, clpc, dinb, gdpd, gmk, tpi, yhfl)
B.cereus INRASAp  MLST(TH, H, P, clpc, dinb, gyrb, mdh, muts, purf, pyca1, rpob)
B.wiedmannii FSLP2-0558Dairy food in process (2009)USA, New YorkMLST(TH, H, P, clpc, dinb, gdpd, gyrb, mdh, muts, pyca1, rpob)
B.cereus 14294-3Food, ice cream (2004)GermanyMLST(TH, CS, P, ftsa, gyrb, mdh, pyca1, recf, rpob, succ)
B.wiedmannii FSLP4-0569Dairy food in process (2010)USA, New YorkMLST(CS, ccpa, ftsa, glpf, gmk, gyrb, mdh, muts, pta, purh, pyca1, pyca2, pyre, recf, rpob, succ, tpi)
B.c_group AH536Soil, strawberry field (1993)Norway, MossAFLP1 MLST(TH, H)
B.c_group AH572Soil, beech grove (1993)Norway, MossMLST(TH, H)
B.c_group AH519Soil, strawberry field (1993)Norway, MossMLST(TH, H)
B.thuringiensis PLBB54/4Soil (2012)PolandMLST(P)
B.thuringiensis PLBB08/1Soil (2012)PolandMLST(P)
B.c_group AH538Soil, strawberry field (1993)Norway, MossAFLP1

2 isolate(s) sharing typing data in supercluster 60

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StrainSourceLocationShared Typing Data
B.cereus MOD1Bc229Food, food product (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc222Food, food product (2016)USA, MarylandMLST(TH, H, K, CS, P)

4 isolate(s) sharing typing data in supercluster 61

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StrainSourceLocationShared Typing Data
B.cereus ISSFR-3FOther, Air (2011) MLST(TH, H, K, CS, P)
B.cereus JEM-2Other, Surface (2009) MLST(TH, H, K, CS, P)
B.cereus ISSFR-9FOther, Air (2011) MLST(TH, H, K, CS, P)
B.cereus ISSFR-23FOther, Air from the International Space Station (ISS) (2011) MLST(H, K, P, clpc, dinb, gdpd, purf, yhfl)

3 isolate(s) sharing typing data in supercluster 62

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StrainSourceLocationShared Typing Data
B.cereus NC401Food (1982)JapanMLST(P)
B.cereus m1280Food, vegetable soup (1987)BrazilMLST(P)
B.cereus WSBC10249Soil (1999)DenmarkMLST(P)

3 isolate(s) sharing typing data in supercluster 63

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StrainSourceLocationShared Typing Data
B.c_group BGSC4AZ2  MLST(P)
B.thuringiensis BGSC4AZ1(1984)CzechoslovakiaMLST(P)
B.c_group KW23[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)

19 isolate(s) sharing typing data in supercluster 64

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StrainSourceLocationShared Typing Data
B.pseudomycoides AFS013396Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.pseudomycoides AFS074367Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.pseudomycoides AFS058668Soil (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS055788Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.pseudomycoides AFS074519Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS042788Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides FSLH8-0534Soil (2006) [soil adjacent to bovine farm]USAMLST(TH, H, K, CS, P)
B.pseudomycoides AFS028766Plant, Corn plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS040883Soil (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS098856Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.pseudomycoides AFS003288Plant, Corn leaf (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.pseudomycoides AFS092115Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.pseudomycoides AFS084126Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.pseudomycoides AFS008599Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides DSM12442SoilGhana or Sweden or USAMLST(TH, H, K, CS, P)
B.pseudomycoides AFS048805Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, P, clpc, dinb, gdpd, purf)
B.pseudomycoides AFS037117Soil (2014)USA, IowaMLST(TH, H, K, P, clpc, dinb, gdpd, yhfl)
B.pseudomycoides AFS054473Plant, Corn core (2014)USA, North CarolinaMLST(H, clpc, gdpd, glpf, gmk, gyrb, mbl, mdh, panc, purf, purh, pyca1, pyca2, rpob, yhfl)
B.c_group FSLK6-0220Animal, cattleUSAMLST(P)

28 isolate(s) sharing typing data in supercluster 65

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StrainSourceLocationShared Typing Data
B.wiedmannii AFS014747Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.wiedmannii AFS057001Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.wiedmannii AFS053866Plant, Corn leaf (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus RIVMBC126#1Human, faeces/stools (1999) [diarrheal food poisoning; two complete genomes sequenced for this strain with different MLST sequences; strain sequenced by INRA-MIG, Unit MIG (Mathematique, Informatique et Genome), Jouy en Josas, France; sequences conflicting with isolate RIVMBC126#2]NetherlandsMLST(TH, H, K, CS, P)
B.wiedmannii AFS050757Plant, Soybean root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS022373Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.wiedmannii RIVMBC126#2Human, faeces/stools (1999) [diarrheal food poisoning; two complete genomes sequenced for this strain with different MLST sequences; strain sequenced by Lehrstuhl fuer Mikrobielle Oekologie, Technische Universitaet Muenchen, Freising, Germany; sequences conflicting with isolate RIVMBC126#1]NetherlandsMLST(TH, H, K, CS, P)
B.wiedmannii AFS026518Plant, soybean seed (2014)USA, IowaMLST(TH, H, K, P, clpc, dinb, gdpd, yhfl)
B.wiedmannii AFS061931Soil (2014)USA, New YorkMLST(TH, H, K, CS, gmk, purh, tpi)
B.wiedmannii AFS029692Plant, core (2014)USA, North CarolinaMLST(H, K, CS, gmk, ilvd, pta, purh, pyca2, tpi)
B.cereus AFS034338Plant, Core Other Plant (2014)USA, North CarolinaMLST(H, K, CS, gmk, ilvd, pta, purh, pyca2, tpi)
B.wiedmannii AFS020690Food, Mushroom (2013)USA, IowaMLST(TH, H, K, CS, gmk, ilvd, purh)
B.wiedmannii AFS029396Plant, Corn core (2014)USA, IllinoisMLST(TH, H, CS, P, gyrb, mbl, mdh, muts, rpob)
B.wiedmannii AFS018713Plant, Corn (2014)USA, IowaMLST(TH, H, CS, P, mbl, mdh, muts, pyca1, rpob)
B.wiedmannii AFS063010(2014)USA, North CarolinaMLST(H, K, CS, glpf, ilvd, purh, pyca2, tpi)
B.wiedmannii AFS080672Soil (2014)USA, New YorkMLST(H, K, clpc, gdpd, gmk, ilvd, panc, pta, purf, purh, pyca2, tpi, yhfl)
B.wiedmannii AFS078322Soil (2014)USA, New YorkMLST(TH, H, P, clpc, dinb, gdpd, gyrb, mdh, muts, purf, pyca1, rpob)
B.wiedmannii AFS045501Soil (2014)USA, New YorkMLST(TH, H, K, P, clpc, purf, yhfl)
B.wiedmannii AFS048126Plant, Corn root (2014)USA, IowaMLST(H, K, CS, glpf, gmk, ilvd, pyca2, tpi)
B.wiedmannii AFS006440Plant, Soybean core (2014)USA, IowaMLST(H, P, clpc, dinb, gdpd, gyrb, mdh, muts, purf, pyca1, rpob, yhfl)
B.wiedmannii AFS045844Plant, core (2014)USA, North CarolinaMLST(TH, H, CS, gmk, gyrb, mbl, mdh, purh, pyca1, rpob, tpi)
B.wiedmannii AFS002659Soil (2014)USA, New YorkMLST(K, CS, adk, ccpa, ftsa, glpf, gmk, ilvd, pta, purh, pyca2, recf, succ)
B.wiedmannii AFS017127Plant, core (2014)USA, North CarolinaMLST(TH, H, CS, gmk, gyrb, mbl, mdh, muts, rpob, tpi)
B.wiedmannii AFS009197Soil (2014)USA, New YorkMLST(TH, H, K, clpc, dinb, gmk, ilvd, purh)
B.wiedmannii AFS010157Plant, Corn core (2014)USA, IllinoisMLST(TH, K, dinb, ftsa, gmk, purf, purh, recf, tpi, yhfl)
B.wiedmannii AFS077115Soil (2014)USA, New YorkMLST(H, clpc, gmk, gyrb, ilvd, mdh, muts, panc, pta, pyca1, rpob, tpi, yhfl)
B.wiedmannii AFS066156Plant, core (2014)USA, North CarolinaMLST(H, clpc, dinb, gmk, gyrb, mbl, mdh, muts, panc, pta, purh, pyca1, pyca2)
B.thuringiensis IBL3720Soil (2009)USA, MarylandMLST(P)

2 isolate(s) sharing typing data in supercluster 66

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StrainSourceLocationShared Typing Data
B.thuringiensis Bt183 BrazilMLST(P)
B.thuringiensis LFB858Food, black pepper (1994)BrazilMLST(P)

2 isolate(s) sharing typing data in supercluster 67

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StrainSourceLocationShared Typing Data
B.c_group KW25[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.thuringiensis T24001 MexicoMLST(P)

6 isolate(s) sharing typing data in supercluster 68

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StrainSourceLocationShared Typing Data
B.cereus BC_19Food, egg product (2006)Italy (Southern)MLST(P)
B.cereus BC_2Food, egg product (2006)Italy (Southern)MLST(P)
B.cereus BC_6Food, egg product (2006)Italy (Southern)MLST(P)
B.cereus BC_16Food, egg product (2006)Italy (Southern)MLST(P)
B.cereus BC_23Food, egg product (2006)Italy (Southern)MLST(P)
B.cereus BC_15Food, egg product (2006)Italy (Southern)MLST(P)

5 isolate(s) sharing typing data in supercluster 69

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StrainSourceLocationShared Typing Data
B.cereus AFS024404Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS026312Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS034468Soil (2014)USA, New YorkMLST(H, K, CS, gmk, ilvd, pta, purh, pyca2, tpi)
B.cereus AFS080704Plant, core (2014)USA, North CarolinaMLST(H, K, CS, gmk, pta, purh, pyca2, tpi)
B.cereus AFS014678Soil (2014)USA, New YorkMLST(TH, H, CS, gyrb, ilvd, mdh, muts, purh, pyca1, rpob, tpi)

4 isolate(s) sharing typing data in supercluster 70

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StrainSourceLocationShared Typing Data
B.c_group B4o6Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.cereus S6621Soil (2007)USA, Maryland, RockvilleMLST(P)
B.c_group A4o6Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group B4o1Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)

6 isolate(s) sharing typing data in supercluster 71

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StrainSourceLocationShared Typing Data
B.cereus NVH0597/99Food, spice mix (1999) [strain believed to be the cause of a diarrheal food poisoning outbreak]NorwayMLST(TH, H, K, CS, P)
B.cereus MOD1Bc122Food, Paprika (2015)USA, MarylandMLST(TH, H, K, CS, P)
B.anthracis RIT375Plant, Insulin plant/Spiral flag (Costus igneus) Internal Stem Tissue (2015)Puerto RicoMLST(TH, CS, P, ftsa, gyrb, mdh, muts, pyca1, pyre, rpob, succ)
B.cereus B5780Human, blood (1970)USA, TexasMLST(P)
B.cereus 191560.KHuman, calf tissue (2003) [human wound infection following insect bite]UK, Scotland, GlasgowMLST(P)
B.cereus B06_020Human, woundFranceMLST(TH)

4 isolate(s) sharing typing data in supercluster 72

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StrainSourceLocationShared Typing Data
B.toyonensis AFS045425Plant, Soybean leaf (2014)USA, MissouriMLST(TH, H, K, CS, P)
B.toyonensis AFS061268Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS044782Plant, Soybean leaf (2014)USA, IowaMLST(H, CS, glpf, gmk, gyrb, ilvd, mdh, muts, purh, pyca1, pyca2, tpi)
B.toyonensis AFS096303Plant, Soybean leaf (2014)USA, MinnesotaMLST(H, clpc, dinb, glpf, gmk, gyrb, ilvd, mdh, muts, panc, purh, pyca1, pyca2, rpob, yhfl)

2 isolate(s) sharing typing data in supercluster 73

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StrainSourceLocationShared Typing Data
B.mycoides R-22293Dairy products, raw milk AFLP3
B.mycoides R-22292Dairy products, raw milk AFLP3

2 isolate(s) sharing typing data in supercluster 74

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StrainSourceLocationShared Typing Data
B.cereus AFS046754Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS079194Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)

2 isolate(s) sharing typing data in supercluster 75

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StrainSourceLocationShared Typing Data
B.cereus B06_025Human, bloodGuyaneMLST(TH)
B.cereus B06_031HumanMartiniqueMLST(TH)

3 isolate(s) sharing typing data in supercluster 76

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StrainSourceLocationShared Typing Data
B.cereus 1Y58Dairy products, milk products (2016)China, Shaanxi ProvinceMLST(P)
B.cereus 1Y55Dairy products, milk products (2016)China, Shaanxi ProvinceMLST(P)
B.cereus 5L45Dairy products, milk products (2016)China, Shaanxi ProvinceMLST(P)

12 isolate(s) sharing typing data in supercluster 77

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StrainSourceLocationShared Typing Data
B.toyonensis BacAerHuman, biopsy of an epithelial lesionBrazil, Rio de JaneiroMLST(K, P, adk, ccpa, clpc, dinb, ftsa, gdpd, panc, pyre, succ, yhfl)
B.cereus Rock3-28SoilUSA, Maryland, RockvilleMLST(K, P, adk, ccpa, clpc, dinb, ftsa, gdpd, panc, pyre, succ, yhfl)
B.cereus S6623Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6645Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6618Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6620Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6563Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6563aSoil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6576Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus BFDA96174(2007)Taiwan, Hsinchu cityMLST(P)
B.cereus CCBH7517(2011)Brazil, Rio de JaneiroMLST(P)
B.cereus S6603Soil (2007)USA, Maryland, RockvilleMLST(P)

7 isolate(s) sharing typing data in supercluster 78

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StrainSourceLocationShared Typing Data
B.cereus AFS067272Plant, Weed plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS077416Plant, Weed plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS016912Plant, core (2014)USA, North CarolinaMLST(TH, H, CS, P, gyrb, mdh, pyca1, rpob)
B.cereus AFS068308Plant, tree leaf (2014)USA, North CarolinaMLST(TH, H, K, clpc, dinb, gdpd, gmk, ilvd, purf)
B.cereus AFS030055Plant, tree leaf (2014)USA, North CarolinaMLST(CS, P, adk, ftsa, glpt, gyrb, pyca1, pyre, recf, rpob, succ)
B.cereus AFS074395Plant, tree leaf (2014)USA, North CarolinaMLST(H, clpc, gdpd, gmk, gyrb, ilvd, mdh, muts, panc, purf, purh, pyca1, pyca2, rpob, tpi)
B.cereus Rock3-44SoilUSA, Maryland, RockvilleMLST(TH, clpc, gdpd, gmk, gyrb, purf, purh, pyca1, recf, rpob, succ, tpi)

2 isolate(s) sharing typing data in supercluster 79

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StrainSourceLocationShared Typing Data
B.thuringiensis Bt152 BrazilMLST(P)
B.thuringiensis LFB563SoilBrazilMLST(P)

2 isolate(s) sharing typing data in supercluster 80

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StrainSourceLocationShared Typing Data
B.cereus BFDA96167Food, rice (2007)Taiwan, Taipei countyMLST(P)
B.cereus BFDA96161Food, rice (2007)Taiwan, Taipei countyMLST(P)

2 isolate(s) sharing typing data in supercluster 81

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StrainSourceLocationShared Typing Data
B.c_group AH587Soil, beech grove (1993)Norway, MossAFLP1
B.c_group AH588Soil, beech grove (1993)Norway, MossAFLP1

2 isolate(s) sharing typing data in supercluster 82

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StrainSourceLocationShared Typing Data
B.c_group AH677Soil, heather soil (1994)Norway, TromsoeAFLP1
B.c_group AH680Soil, heather soil (1994)Norway, TromsoeAFLP1

2 isolate(s) sharing typing data in supercluster 83

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StrainSourceLocationShared Typing Data
B.thuringiensis HBF-18Soil (2003)China, Hebei, BaodingMLST(TH, H, K, CS, P)
B.thuringiensis Fcd114Soil (2003)China, Hebei, BaodingMLST(TH, H, K, CS, P)

2 isolate(s) sharing typing data in supercluster 84

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StrainSourceLocationShared Typing Data
B.cereus AFS010695Soil (2014)USA, North CarolinaMLST(TH, ftsa, gdpd, gmk, gyrb, muts, purf, purh, pyca1, pyre, rpob, succ, tpi)
B.c_group BAG2X1-3SoilUSA, Massachusetts, BostonMLST(TH, ftsa, gdpd, gmk, gyrb, muts, purf, purh, pyca1, pyre, rpob, succ, tpi)

48 isolate(s) sharing typing data in supercluster 85

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StrainSourceLocationShared Typing Data
B.cereus AFS025909Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS003338Plant, Corn (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS031264Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS004748Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS077972Plant, Soybean root (2013)USA, MinnesotaMLST(TH, H, K, CS, P)
B.cereus AFS025485Plant, Corn (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS007868Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS086892Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS037584Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus AFS040984Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus AFS020233Plant, Corn root (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus AFS032151Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS014847Plant, Corn (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS000144Plant, Corn (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS028514Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus AFS063866Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS074370Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS028516Plant, Corn leaf (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus AFS027898Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS011202Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS094413Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS026439Plant, Soybean root (2014)USA, MissouriMLST(TH, H, K, CS, P)
B.cereus AFS023425Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS047135Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS051030(2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS009443Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus AFS082524Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS050653Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS008423Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS095084Plant, Soybean root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS036159Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS060621Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS024540Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS006340Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS079942Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS000175Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS017700Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS024847Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS048756Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS007234Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS046388Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS091626Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS019247Plant, Corn (2014)USA, IowaMLST(TH, H, K, P, clpc, gdpd, purf, yhfl)
B.cereus AFS074868Plant, Corn leaf (2014)USA, IowaMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.cereus AFS065445Plant, Corn core (2014)USA, North CarolinaMLST(CS, adk, ccpa, ftsa, glpt, gyrb, mdh, muts, pta, purh, pyca1, pyca2, pyre, recf)
B.cereus 163770.KHuman, wound infection (2005)UK, ScotlandMLST(P)
B.cereus F5157Food (1983) [diarrheal food poisoning]USA, CaliforniaMLST(P)
B.cereus ATCC6464Soil MLST(CS)

10 isolate(s) sharing typing data in supercluster 86

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StrainSourceLocationShared Typing Data
B.cereus AFS041242Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.c_group BAG2O-3SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.c_group B5-2SoilChinaMLST(TH, H, K, CS, P)
B.cereus AFS047977Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS077649Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS069564Plant, Corn root (2013)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS086766(2014)USA, North CarolinaMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.cereus AFS038165Soil (2014)USA, New YorkMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.cereus AFS040108Plant, Oats plant (2014)USA, North CarolinaMLST(TH, H, CS, P, mdh, muts, pyca1, rpob)
B.cereus AFS009781Soil (2014)USA, New YorkMLST(H, CS, glpf, gmk, gyrb, ilvd, muts, purh, pyca1, pyca2, rpob, tpi)

3 isolate(s) sharing typing data in supercluster 87

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StrainSourceLocationShared Typing Data
B.cereus BC_20Food, egg product (2006)Italy (Southern)MLST(P)
B.cereus BC_22Food, egg product (2006)Italy (Southern)MLST(P)
B.cereus BC_13Food, egg product (2006)Italy (Southern)MLST(P)

2 isolate(s) sharing typing data in supercluster 88

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StrainSourceLocationShared Typing Data
B.thuringiensis HD41  AFLP2
B.thuringiensis HD288  AFLP2

2 isolate(s) sharing typing data in supercluster 89

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StrainSourceLocationShared Typing Data
B.cereus UHB154Food, cake (2000) [diarrheal food poisoning outbreak]FinlandAFLP3
B.cereus NVH0230/00Food, mushroom stew (2000) [diarrheal food poisoning outbreak]NorwayAFLP3

4 isolate(s) sharing typing data in supercluster 90

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StrainSourceLocationShared Typing Data
B.thuringiensis HD529 JapanAFLP2
B.thuringiensis HD526 JapanAFLP2
B.thuringiensis HD528 JapanAFLP2
B.thuringiensis HD527 JapanAFLP2

3 isolate(s) sharing typing data in supercluster 91

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StrainSourceLocationShared Typing Data
B.cereus 644-715-5Human, blood (2003) [human pyrexia]JapanMLST(P)
B.cereus BCT1 JapanMLST(P)
B.cereus BCT2 JapanMLST(P)

2 isolate(s) sharing typing data in supercluster 92

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StrainSourceLocationShared Typing Data
B.cereus F2404B/79(1979) [diarrheal food poisoning outbreak] MLST(P)
B.thuringiensis K15_252(2015)Korea (South)MLST(P)

3 isolate(s) sharing typing data in supercluster 93

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StrainSourceLocationShared Typing Data
B.thuringiensis HD577 ChinaAFLP2
B.thuringiensis HD501 ChinaAFLP2
B.thuringiensis HD536 ChinaAFLP2

2 isolate(s) sharing typing data in supercluster 94

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StrainSourceLocationShared Typing Data
B.c_group AH618Soil, heather soil (1994)Norway, Singsaas/SaeterengAFLP1
B.c_group AH645Soil, heather soil (1994)Norway, SteigenAFLP1

3 isolate(s) sharing typing data in supercluster 95

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StrainSourceLocationShared Typing Data
B.cereus 58R4Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. hereward grown in a plot in which the previous crop was wheat (Triticum aestivum) var. cadenza]UK, England, RothamstedMLST(P)
B.c_group D10-6.A.iSoil (2006)UKMLST(P)
B.cereus 58R2Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. hereward grown in a plot in which the previous crop was wheat (Triticum aestivum) var. cadenza]UK, England, RothamstedMLST(P)

8 isolate(s) sharing typing data in supercluster 96

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StrainSourceLocationShared Typing Data
B.thuringiensis BGSC4Y1Other, soil or litter of silkworm (Bombyx mori)JapanAFLP2 MLST(TH, H, K, CS, P)
B.cereus 6113Human, vomit (2016)ChinaMLST(TH, H, K, CS, P)
B.thuringiensis XL6Soil (2006)China, Inner MongoliaMLST(TH, H, K, CS, P)
B.cereus AR156Soil, garden soil (2008)ChinaMLST(K, CS, P, ccpa, ftsa, pyre, recf)
B.cereus MOD1Bc81Food, Whole Black Pepper (2015)USA, MarylandMLST(P, adk, ccpa, clpc, dinb, ftsa, gdpd, pyca1, pyre, recf, succ, yhfl)
B.thuringiensis KB1Plant, thale cress (Arabidopsis thaliana) apoplast (2012)Korea (South), DaejeonMLST(K, clpc, dinb, ftsa, glpf, ilvd, panc, pta, purf, purh, pyre, tpi)
B.cereus BFDA96164Food, rice (2007)Taiwan, Taipei countyMLST(P)
B.thuringiensis HD76  AFLP2

8 isolate(s) sharing typing data in supercluster 97

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StrainSourceLocationShared Typing Data
B.thuringiensis BGSC4AC1Soil (1988)MexicoMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4AJ1[produces a polyglutamate capsule resembling that of B.anthracis; two complete genomes sequenced for this strain with identical MLST sequences]MexicoMLST(TH, H, K, CS, P)
B.c_group AH820Human, periodontitis (1995)Norway, AkershusMLST(TH, H, P, clpc, dinb, gdpd, gyrb, mdh, purf, pyca1, rpob)
B.c_group AH813Human, periodontitis (1995)Brazil, CuritibaMLST(TH, H)
B.c_group AH816Human, periodontitis (1995)Norway, AkershusMLST(TH, H)
B.c_group AH818Human, periodontitis (1995)Brazil, CuritibaMLST(TH, H)
B.cereus S6598Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus BFDA96119Food (2007)Taiwan, Yilan countyMLST(P)

2 isolate(s) sharing typing data in supercluster 98

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StrainSourceLocationShared Typing Data
B.cereus S3-7Other, environmental AFLP2
B.cereus R12Food; Food Research Institute, University of Wisconsin-MadisonUSA, Wisconsin, MadisonAFLP2

18 isolate(s) sharing typing data in supercluster 99

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StrainSourceLocationShared Typing Data
B.cereus AFS016726Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS022238Food, Mushroom (2013)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS010456Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS022362Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS054043Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS000393Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS071406Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS048418Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS050681Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS091954Soil (2014)USA, New YorkMLST(TH, K, CS, P, pyre, recf, succ)
B.cereus AFS039926Soil (2014)USA, New YorkMLST(TH, H, CS, P, gyrb, mbl, mdh, muts, rpob)
B.cereus AFS017202Plant, Corn root (2014)USA, IowaMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.cereus AFS086955Soil (2014)USA, New YorkMLST(TH, H, K, CS, gmk, ilvd, purh)
B.cereus AFS070292Soil (2014)USA, New YorkMLST(H, K, CS, glpf, gmk, ilvd, purh, pyca2, tpi)
B.c_group BAG3X2-1SoilUSA, Massachusetts, BostonMLST(TH, H, K, P, clpc, dinb, gdpd, purf)
B.cereus AFS085854Soil (2014)USA, New YorkMLST(H, CS, glpf, gmk, gyrb, ilvd, mdh, muts, purh, pyca2, rpob, tpi)
B.cereus AFS055677Soil (2014)USA, IowaMLST(H, CS, glpf, gmk, gyrb, ilvd, mdh, muts, purh, pyca2, rpob, tpi)
B.cereus AFS026918Soil (2014)USA, New YorkMLST(CS, ccpa, ftsa, glpf, gmk, gyrb, ilvd, mdh, muts, pyca2, pyre, recf, rpob, succ, tpi)

2 isolate(s) sharing typing data in supercluster 100

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StrainSourceLocationShared Typing Data
B.weihenstephanensis WSBC10365SoilGermanyAFLP3
B.weihenstephanensis WSBC10363SoilGermanyAFLP3

6 isolate(s) sharing typing data in supercluster 101

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StrainSourceLocationShared Typing Data
B.weihenstephanensis WSBC10202Dairy products, pasteurized milk (1999)GermanyAFLP3 MLST(P)
B.weihenstephanensis Bw210Food (2005)UK, Wales, CardiffMLST(P)
B.weihenstephanensis BGSC6A46  MLST(P)
B.weihenstephanensis Bw180Food (2005)UK, Wales, CardiffMLST(P)
B.weihenstephanensis WSBC10212Dairy products, pasteurized milkGermanyAFLP3
B.weihenstephanensis WSBC10203Dairy products, pasteurized milkGermanyAFLP3

2 isolate(s) sharing typing data in supercluster 102

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StrainSourceLocationShared Typing Data
B.cereus R6Food; Food Research Institute, University of Wisconsin-MadisonUSA, Wisconsin, MadisonAFLP2
B.thuringiensis HD292  AFLP2

23 isolate(s) sharing typing data in supercluster 103

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StrainSourceLocationShared Typing Data
B.toyonensis AFS047230Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS069354Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS033534Plant, Soybean leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS020202Plant, Weed plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.toyonensis AFS072674Plant, Soybean leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS011667Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS074602Plant, Soybean leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS000753Plant, Soybean leaf (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS075176Plant, Corn leaf (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS070352Plant, Soybean leaf (2014)USA, IowaMLST(TH, H, K, P, clpc, dinb, gdpd, purf)
B.toyonensis AFS061925Plant, Corn root (2014)USA, IowaMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.toyonensis AFS032951Soil (2014)USA, IowaMLST(H, K, CS, glpf, gmk, ilvd, purh, pyca2, tpi)
B.toyonensis AFS072125Plant, Soybean leaf (2014)USA, IowaMLST(TH, K, CS, P, ftsa, pyre, succ)
B.toyonensis AFS005430Plant, soybean seed (2014)USA, IowaMLST(K, CS, P, adk, ftsa, glpt, recf, succ)
B.toyonensis AFS038153Plant, core (2014)USA, North CarolinaMLST(TH, H, P, clpc, gdpd, mbl, mdh, muts, purf, pyca1, rpob, yhfl)
B.toyonensis AFS076931Soil (2014)USA, IowaMLST(H, CS, gmk, gyrb, ilvd, mdh, muts, pta, purh, pyca2, rpob, tpi)
B.toyonensis AFS077622Plant, Soybean core (2014)USA, IowaMLST(TH, P, clpc, ftsa, gdpd, gyrb, mdh, muts, purf, pyca1, recf, rpob, succ, yhfl)
B.toyonensis AFS021654Plant, Soybean core (2014)USA, IowaMLST(H, CS, gmk, gyrb, ilvd, mdh, muts, pta, purh, pyca1, rpob, tpi)
B.toyonensis AFS089278Plant, core (2014)USA, North CarolinaMLST(H, K, P, gdpd, purf)
B.toyonensis AFS054461Soil (2014)USA, IowaMLST(P, adk, ccpa, clpc, ftsa, gdpd, gyrb, mdh, muts, panc, purf, pyca1, recf, rpob, succ, yhfl)
B.toyonensis AFS010752Plant, core (2014)USA, North CarolinaMLST(CS, adk, ccpa, ftsa, glpt, gmk, gyrb, ilvd, mdh, muts, pta, purh, pyca1, pyre, rpob, succ)
B.cereus S6597Soil (2007)USA, Maryland, RockvilleMLST(P)
B.thuringiensis PLJAS42/3Soil (2012)PolandMLST(P)

3 isolate(s) sharing typing data in supercluster 104

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StrainSourceLocationShared Typing Data
B.thuringiensis BGSC4M3#1(1968) [two complete genomes sequenced for this strain with different MLST sequences and origins; strain sequenced by State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, Hubei, China; sequences conflicting with isolate BGSC4M3#2]UK, EnglandMLST(TH, H, K, CS, P)
B.thuringiensis BMB171Other, acrystalliferous mutant derived from B.thuringiensis kurstaki strain YBT-1463 cured of the insecticidal toxin plasmid at Huazhong Agricultural UniversityChina, WuhanMLST(TH, H, K, CS, P)
B.cereus 156429.NHuman, wound infection (2004)UK, ScotlandMLST(P)

2 isolate(s) sharing typing data in supercluster 105

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StrainSourceLocationShared Typing Data
B.c_group A3m1Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group A3g1Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)

3 isolate(s) sharing typing data in supercluster 106

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StrainSourceLocationShared Typing Data
B.c_group S10AOther, human or soil from unidentified epidemic diseaseKoreaMLST(P)
B.c_group RhoOther, human or soil from unidentified epidemic diseaseKoreaMLST(P)
B.c_group 11R-1Other, human or soil from unidentified epidemic diseaseKoreaMLST(P)

2 isolate(s) sharing typing data in supercluster 107

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StrainSourceLocationShared Typing Data
B.c_group AH673Soil, heather soil (1994)Norway, TromsoeAFLP1
B.c_group AH670Soil, woodland soil (1994)Norway, BrekkvasselvAFLP1

2 isolate(s) sharing typing data in supercluster 108

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StrainSourceLocationShared Typing Data
B.thuringiensis T30001  MLST(TH, H, K, CS, P)
B.thuringiensis NRRL23135Animal, Insect, Culicidae (Mosquitoes) (2013)UKMLST(TH, H, K, CS, P)

2 isolate(s) sharing typing data in supercluster 109

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StrainSourceLocationShared Typing Data
B.thuringiensis NRRLB-18679Animal, Insect, Coleoptera (2013)UKMLST(H, CS, gmk, gyrb, ilvd, mdh, muts, pta, purh, pyca1, pyca2, rpob)
B.wiedmannii AFS026346Soil (2014)USA, North CarolinaMLST(H, CS, gmk, gyrb, ilvd, mdh, muts, pta, purh, pyca1, pyca2, rpob)

2 isolate(s) sharing typing data in supercluster 110

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StrainSourceLocationShared Typing Data
B.c_group A4m4Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group B4m1Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)

14 isolate(s) sharing typing data in supercluster 111

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StrainSourceLocationShared Typing Data
B.cereus AFS066501Food, Mushroom (2013)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS031003Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS081153Food, Mushroom (2013)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS074724Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS019647Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS084744Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS022438Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus F65185Human, wound (2005) [from an open fracture; encapsulated isolate]USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS086407Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS033400Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS067315Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS061928Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS077084Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS082943Plant, Corn core (2014)USA, North CarolinaMLST(TH, K, CS, P, ftsa, recf, succ)

3 isolate(s) sharing typing data in supercluster 112

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StrainSourceLocationShared Typing Data
B.cereus KBCB5Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.cereus KBCB6Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.cereus KBCB8Soil, Forest soil (2000)France, VersaillesMLST(CS)

7 isolate(s) sharing typing data in supercluster 113

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StrainSourceLocationShared Typing Data
B.cereus BDRD-ST196[Biological Defense Research Directorate (BDRD)]USA, Maryland, RockvilleMLST(TH, H, K, CS, P)
B.weihenstephanensis DSM11821Dairy products, pasteurized milk (1992) [from the same dairy as isolates WSBC10028, WSBC10029, WSBC10030, WSBC10031, WSBC10042, WSBC10201, WSBC10205, WSBC10206, WSBC10208, and WSBC10211; two complete genomes sequenced for this strain with identical MLST sequences; sequences conflicting with isolate WSBC10204] MLST(TH, H, K, CS, P)
B.c_group D10-23.a.i2Soil (2006)UKMLST(P)
B.thuringiensis 1710-S-1Plant, leaves of clover (Trifolium hybridum) (2004)UKMLST(P)
B.c_group D10-23.a.iSoil (2006)UKMLST(P)
B.cereus 25R3Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. x:19 grown in a plot in which the previous crop was wheat (Triticum aestivum) var. cadenza]UK, England, RothamstedMLST(P)
B.c_group A3g4Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)

2 isolate(s) sharing typing data in supercluster 114

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StrainSourceLocationShared Typing Data
B.c_group C3o7Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group A4g1Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)

4 isolate(s) sharing typing data in supercluster 115

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StrainSourceLocationShared Typing Data
B.thuringiensis BGSC4BK1SoilSpainMLST(TH, CS, P, gyrb, mdh, muts, pyca1, recf, rpob, succ)
B.thuringiensis BGSC4BV1 ArgentinaMLST(TH, CS, P, gyrb, mdh, muts, pyca1, recf, rpob, succ)
B.c_group KW48[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.c_group KW60[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)

2 isolate(s) sharing typing data in supercluster 116

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StrainSourceLocationShared Typing Data
B.c_group VD021Other, Water from a small pond siteBelgiumMLST(P)
B.weihenstephanensis 4405Food (2005)UK, England, LeedsMLST(P)

2 isolate(s) sharing typing data in supercluster 117

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StrainSourceLocationShared Typing Data
B.c_group AH636Soil, heather soil (1994)Norway, Singsaas/SaeterengAFLP1
B.c_group AH667Soil, woodland soil (1994)Norway, BrekkvasselvAFLP1

2 isolate(s) sharing typing data in supercluster 118

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StrainSourceLocationShared Typing Data
B.c_group AH591Soil, beech grove (1993)Norway, MossAFLP1
B.c_group AH514Soil, leaf and grass compost (1993)Norway, MossAFLP1

8 isolate(s) sharing typing data in supercluster 119

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StrainSourceLocationShared Typing Data
B.thuringiensis HD571 JapanMLST(TH, H, K, CS, P)
B.thuringiensis BtAlHakamOther, suspected bioweapons facilityIraqMLST(TH, H, K, CS, P)
B.c_group IV  MLST(P)
B.c_group 003 IraqMLST(P)
B.c_group IB IraqMLST(P)
B.c_group III IraqMLST(P)
B.cereus III-BS[Pasteur Institute]France, ParisMLST(P)
B.cereus III-BL[Pasteur Institute]France, ParisMLST(P)

7 isolate(s) sharing typing data in supercluster 120

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StrainSourceLocationShared Typing Data
B.cytotoxicus CH38Food, Mashed potatoes (2014)SwitzerlandMLST(TH, K, CS, P, ftsa, pyre, succ)
B.cytotoxicus CH3Food, Mashed potatoes (2015)SwitzerlandMLST(TH, K, CS, P, ftsa, pyre, succ)
B.cytotoxicus CH4Food, Mashed potatoes (2015)SwitzerlandMLST(TH, K, CS, P, ftsa, pyre, succ)
B.cytotoxicus CH39Food, Mashed potatoes (2014)SwitzerlandMLST(TH, K, CS, P, ftsa, pyre, succ)
B.cytotoxicus CH15Food, Mashed potatoes (2015)SwitzerlandMLST(TH, K, CS, P, ftsa, pyre, succ)
B.cytotoxicus NVH0883/00Food, spices (2000)NorwayMLST(K, CS, adk, ccpa, ftsa, glpf, glpt, gmk, ilvd, purh, pyca2, pyre, succ, tpi)
B.cytotoxicus CH2Food, Mashed potatoes (2015)SwitzerlandMLST(TH, K, CS, ftsa, gmk, purh, pyre, succ, tpi)

9 isolate(s) sharing typing data in supercluster 121

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StrainSourceLocationShared Typing Data
B.cereus BC_49Dairy products, farm dairy products (2006)Italy (Northeastern)MLST(P)
B.cereus BC_39Food, raw fish (2006)Italy (Northeastern)MLST(P)
B.cereus BC_38Dairy products, industrial dairy products (2006)Italy (Northeastern)MLST(P)
B.cereus BC_48Dairy products, farm dairy products (2006)Italy (Northeastern)MLST(P)
B.cereus BC_36Dairy products, industrial dairy products (2006)Italy (Northeastern)MLST(P)
B.cereus BC_47Dairy products, farm dairy products (2006)Italy (Northeastern)MLST(P)
B.cereus BC_33Dairy products, industrial dairy products (2006)Italy (Northeastern)MLST(P)
B.cereus BC_46Dairy products, farm dairy products (2006)Italy (Northeastern)MLST(P)
B.cereus BC_40Food, raw fish (2006)Italy (Northeastern)MLST(P)

2 isolate(s) sharing typing data in supercluster 122

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StrainSourceLocationShared Typing Data
B.cereus KBAA2Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.cereus KBAA6Soil, Forest soil (2000)France, VersaillesMLST(CS)

11 isolate(s) sharing typing data in supercluster 123

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StrainSourceLocationShared Typing Data
B.anthracis AFS057764Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.anthracis AFS044825Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.anthracis AFS012870Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.anthracis AFS018197Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.anthracis AFS017361Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.anthracis AFS058633Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, clpc, dinb, gmk, ilvd, purf, tpi, yhfl)
B.cereus AFS067103Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, dinb, gdpd, gmk, gyrb, ilvd, mdh, muts, pyca1, rpob, tpi)
B.cereus AFS093598Plant, tree leaf (2014)USA, North CarolinaMLST(H, K, dinb, gdpd, glpf, ilvd, panc, pta, purh, tpi)
B.anthracis AFS032297Soil (2014)USA, North CarolinaMLST(K, adk, ccpa, dinb, ftsa, gdpd, glpt, ilvd, panc, pta, purf, purh, pyre, recf, tpi)
B.anthracis AFS041580Plant, core (2014)USA, North CarolinaMLST(TH, dinb, ftsa, gdpd, gmk, gyrb, ilvd, mdh, muts, purf, pyca1, rpob, succ, yhfl)
B.cereus AFS021040Plant, core (2014)USA, North CarolinaMLST(CS, adk, ccpa, ftsa, ilvd, mdh, purh, pyca1, pyca2, pyre, rpob, succ)

5 isolate(s) sharing typing data in supercluster 124

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StrainSourceLocationShared Typing Data
B.pseudomycoides AFS063129Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.pseudomycoides AFS032644Plant, Corn (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS098564Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS062925Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS039118Plant, Corn leaf (2014)USA, IndianaMLST(TH, H, K, CS, P)

2 isolate(s) sharing typing data in supercluster 125

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StrainSourceLocationShared Typing Data
B.thuringiensis T06010Animal, Insect, Termites (1983)PakistanMLST(P)
B.thuringiensis T06007Animal, Insect,Termites (1983) [sequences conflicting with isolate BGSC4I6]PakistanMLST(P)

16 isolate(s) sharing typing data in supercluster 126

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StrainSourceLocationShared Typing Data
B.cereus AFS091573Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS072260Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS018601Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS030086Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS005977Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS039283Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS056613Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS007502Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS083341Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS060152Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS039482Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS056582Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS009143Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS047152Soil (2014)USA, New YorkMLST(TH, H, K, P, clpc, dinb, gdpd, yhfl)
B.cereus AFS053272Soil (2014)USA, North CarolinaMLST(TH, H, K, P, clpc, dinb, gdpd, purf)
B.cereus AFS084412Plant, core (2014)USA, North CarolinaMLST(K, P, adk, ccpa, clpc, dinb, ftsa, gdpd, panc, purf, pyre, recf, succ)

2 isolate(s) sharing typing data in supercluster 127

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StrainSourceLocationShared Typing Data
B.cereus BFDA96169Food, rice (2007)Taiwan, Taipei countyMLST(P)
B.cereus BFDA96165Food, rice (2007)Taiwan, Taipei countyMLST(P)

3 isolate(s) sharing typing data in supercluster 128

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StrainSourceLocationShared Typing Data
B.thuringiensis HD287  AFLP2
B.thuringiensis HD263Animal, Insect, Almond moth (Ephestia cautella/Cadra cautella)UK, EnglandAFLP2
B.thuringiensis HD299Animal, Insect, Mediterranean flour moth/mill moth (Ephestia kuhniella/Anagasta kuehniella) AFLP2

2 isolate(s) sharing typing data in supercluster 129

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StrainSourceLocationShared Typing Data
B.cereus YN12BC10Soil (2012)China, Yunnan ProvinceMLST(P)
B.cereus AFS049141Soil (2014)USA, New YorkMLST(P)

6 isolate(s) sharing typing data in supercluster 130

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StrainSourceLocationShared Typing Data
B.cereus AFS097219Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS096719Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS006512Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS080155Plant, Core Corn (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS075012Plant, Corn core (2014)USA, North CarolinaMLST(H, CS, gmk, gyrb, ilvd, mdh, muts, purh, pyca1, pyca2, rpob, tpi)
B.cereus AFS014679Plant, core (2014)USA, North CarolinaMLST(CS, adk, ccpa, glpt, gmk, mdh, purh, pyca1, rpob)

2 isolate(s) sharing typing data in supercluster 131

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StrainSourceLocationShared Typing Data
B.cereus FSLH8-0485Soil (2006)USAMLST(H, clpc, dinb, gdpd, glpf, gmk, gyrb, ilvd, mdh, muts, pta, purf, purh, rpob, tpi)
B.cereus B4083Food (2013)NetherlandsMLST(H, clpc, dinb, gdpd, glpf, gmk, gyrb, ilvd, mdh, muts, pta, purf, purh, rpob, tpi)

8 isolate(s) sharing typing data in supercluster 132

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StrainSourceLocationShared Typing Data
B.wiedmannii AFS027394Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.wiedmannii AFS035656Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS012729Plant, Soybean root (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.wiedmannii AFS071099Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.wiedmannii AFS023094Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS008176Plant, Corn root (2013)USA, MinnesotaMLST(TH, H, K, CS, P)
B.wiedmannii AFS096149Plant, Corn grainbin dust (2013)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS080777Plant, Soybean leaf (2014)USA, MinnesotaMLST(H, K, CS, glpf, gmk, ilvd, purh, pyca2, tpi)

30 isolate(s) sharing typing data in supercluster 133

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StrainSourceLocationShared Typing Data
B.pseudomycoides AFS022719Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS022598Plant, Soybean leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS050088Plant, Corn leaf (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.pseudomycoides AFS081374Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS024482(2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS003503Plant, Corn grainbin dust (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS077796Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS018958Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS069374Soil (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS087909(2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS077577Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.pseudomycoides AFS088215Plant, Corn grainbin dust (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS032210Plant, Weed leaf (2014)USA, OhioMLST(TH, H, K, CS, P)
B.pseudomycoides AFS095135Plant, leaf (2014)USA, IndianaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS064122Other, excrement (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS086794Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS037265Plant, Soybean leaf (2014)USA, MissouriMLST(TH, H, K, CS, P)
B.pseudomycoides AFS045932Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.pseudomycoides AFS062349Plant, Corn (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS000230Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS062254Plant, Corn leaf (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.pseudomycoides AFS026185Plant, Corn (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.mycoides Rock1-4SoilUSA, Maryland, RockvilleMLST(TH, H, K, CS, P)
B.pseudomycoides AFS080834Plant, Weed leaf (2014)USA, OhioMLST(H, K, CS, glpf, gmk, ilvd, purh, pyca2, tpi)
B.pseudomycoides AFS058374Plant, Soybean core (2014)USA, IowaMLST(H, K, CS, glpf, gmk, ilvd, purh, pyca2, tpi)
B.mycoides Rock3-17SoilUSA, Maryland, RockvilleMLST(TH, H, K, P, clpc, dinb, gdpd, purf)
B.pseudomycoides AFS022050Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, gmk, ilvd, tpi)
B.pseudomycoides AFS093408Plant, leaf (2014)USA, IndianaMLST(TH, H, CS, P, mbl, mdh, muts, pyca1, rpob)
B.pseudomycoides AFS095604Plant, Soybean core (2014)USA, IowaMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1)
B.c_group KW57[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)

6 isolate(s) sharing typing data in supercluster 134

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StrainSourceLocationShared Typing Data
B.cereus S2-8Soil (1993) [University of Wisconsin-Madison]USA, Wisconsin, MadisonAFLP2 MLST(TH, H, K, CS, P)
B.cereus 3a[Food Research Institute, University of Wisconsin-Madison]USA, Wisconsin, MadisonAFLP2 MLST(TH, H, K, CS, P)
B.cereus F95/8201Human, endocarditis; Prince Charles Hospital (1995)UK, Wales, Merthyr TydfilMLST(TH, H, K, CS, P)
B.cereus PE8-121bAnimal, marine sponge (Spongia sp.) (2013)South Africa, Algoa Bay, White Sands Reef, Indian Ocean, Port ElizabethMLST(TH, H, K, CS, P)
B.cereus PE5-132Animal, marine sponge (Waltherarndtia caliculatum) (2013)South Africa, Algoa Bay, White Sands Reef, Indian Ocean, Port ElizabethMLST(P, adk, clpc, dinb, gdpd, panc, purf, recf, rpob)
B.cereus D4088Human, blood (1975)USA, ColoradoMLST(P)

10 isolate(s) sharing typing data in supercluster 135

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StrainSourceLocationShared Typing Data
B.cereus M3Food, Korean fermented food (2016)Korea (South)MLST(TH, H, K, CS, P)
B.cereus SJ-S25HumanUSA, Tennessee, MemphisMLST(TH, H, K, CS, P)
B.cereus MOD1Bc112Other, Powdered Infant Formula (2015)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus SJ-S7HumanUSA, Tennessee, MemphisMLST(TH, K, CS, P, ftsa, pyre, recf)
B.cereus DSM2302Food poisoning incident (1980)Canada, Ontario, TorontoMLST(TH, H, P, clpc, dinb, gyrb, muts)
B.cereus SJ-S20HumanUSA, Tennessee, MemphisMLST(H, clpc, glpf, gmk, gyrb, pta, pyca2)
B.cereus B366[German Armed Forces (Bundeswehr) Institute of Microbiology]Germany, MunichMLST(H)
B.cereus BGSC6A71Food (2003) [sequences conflicting with isolate MM_3]USAMLST(P)
B.cereus MM_4Food (2003)USAMLST(P)
B.c_group K14_1749(2014)Korea (South)MLST(P)

2 isolate(s) sharing typing data in supercluster 136

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StrainSourceLocationShared Typing Data
B.cereus 2013-8Dairy products, milk productsChinaMLST(P)
B.cereus MOD1Bc110Other, Oxytetracycline Medicated Fish Feed (2007)USA, MarylandMLST(P)

2 isolate(s) sharing typing data in supercluster 137

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StrainSourceLocationShared Typing Data
B.weihenstephanensis MC118Soil, mud [emetic toxin/cereulide producer]DenmarkMLST(TH, H, K, CS, P)
B.weihenstephanensis MC67Soil, mud [emetic toxin/cereulide producer]DenmarkMLST(TH, H, K, CS, P)

3 isolate(s) sharing typing data in supercluster 138

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StrainSourceLocationShared Typing Data
B.pseudomycoides AFS090208Plant, Corn grainbin dust (2013)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS009643Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS048537Plant, Soybean core (2014)USA, IowaMLST(TH, K, CS, P, ftsa, pyre, recf)

5 isolate(s) sharing typing data in supercluster 139

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StrainSourceLocationShared Typing Data
B.c_group MCCC1A06378Other, sediments (2009)Gulf of MexicoMLST(P)
B.c_group MCCC1A00365Other, sediments (2006)Pacific OceanMLST(P)
B.c_group MCCC1A06374Other, sediments (2010)Gulf of MexicoMLST(P)
B.c_group MCCC1A06375Other, sediments (2010)Gulf of MexicoMLST(P)
B.c_group MCCC1A06376Other, sediments (2009)Gulf of MexicoMLST(P)

2 isolate(s) sharing typing data in supercluster 140

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StrainSourceLocationShared Typing Data
B.c_group AH532Soil, strawberry field (1993)Norway, MossAFLP1
B.c_group AH527Soil, strawberry field (1993)Norway, MossAFLP1

3 isolate(s) sharing typing data in supercluster 141

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StrainSourceLocationShared Typing Data
B.cereus MHI124Food, baby food (1993)Germany, MunichAFLP3
B.cereus UHB217Human, faeces/stools (2000) [diarrheal food poisoning outbreak]FinlandAFLP3
B.cereus INRAPADairy products, Milk protein (1998)France, NormandieAFLP3

2 isolate(s) sharing typing data in supercluster 142

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StrainSourceLocationShared Typing Data
B.c_group MCCC1A02161Other, sediments (2006)South China SeaMLST(P)
B.anthracis N1ZF-2Other, Sediments (2002)China, South China SeaMLST(P)

3 isolate(s) sharing typing data in supercluster 143

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StrainSourceLocationShared Typing Data
B.cereus KBCE3Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.cereus KBCE4Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.cereus KBCD8Soil, Forest soil (2000)France, VersaillesMLST(CS)

3 isolate(s) sharing typing data in supercluster 144

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StrainSourceLocationShared Typing Data
B.thuringiensis BGSC4I4Animal, Insect, stored nut moth (Paralipsa gularis) (1958) [two complete genomes sequenced for this strain with identical MLST sequences]CanadaMLST(P)
B.c_group KW36[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.thuringiensis IBL1677Soil (1983)USA, WyomingMLST(P)

6 isolate(s) sharing typing data in supercluster 145

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StrainSourceLocationShared Typing Data
B.cereus AFS079368Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS055402Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS046104Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS096926Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS016962Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis IBL3679Soil (2009)USA, MarylandMLST(P)

2 isolate(s) sharing typing data in supercluster 146

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StrainSourceLocationShared Typing Data
B.thuringiensis HD538 FranceAFLP2
B.thuringiensis HD453  AFLP2

4 isolate(s) sharing typing data in supercluster 147

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StrainSourceLocationShared Typing Data
B.thuringiensis HD626 JapanAFLP2
B.thuringiensis HD604 JapanAFLP2
B.thuringiensis HD628 JapanAFLP2
B.thuringiensis T10016#3[sequences conflicting with isolate T10016#2; due to conflicting MLST data between isolates T10016#1 and T10016#2 it cannot be determined to which isolate the AFLP data correspond to]USA, LouisianaAFLP2

6 isolate(s) sharing typing data in supercluster 148

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StrainSourceLocationShared Typing Data
B.c_group VD048SoilGreenlandMLST(TH, H, P)
B.c_group AH663Soil, woodland soil (1994)Norway, BrekkvasselvAFLP1 MLST(TH, H)
B.c_group AH632Soil, heather soil (1994)Norway, Singsaas/SaeterengAFLP2 MLST(H, glpf, panc, pta)
B.c_group A4g5Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group AH634Soil, heather soil (1994)Norway, Singsaas/SaeterengAFLP2
B.c_group AH671Soil, heather soil (1994)Norway, TromsoeAFLP1

11 isolate(s) sharing typing data in supercluster 149

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StrainSourceLocationShared Typing Data
B.cereus FSLK6-0073Dairy products, Laboratory Heat Treated Raw Milk (2012)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus B4084Food (2013)NetherlandsMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4BU1 SpainMLST(P, adk, ccpa, clpc, dinb, ftsa, gyrb, mdh, muts, panc, purf, pyca1, pyre, recf, rpob, succ, yhfl)
B.cereus Lr4/2  MLST(TH, P, clpc, ftsa, gdpd, gyrb, mdh, muts, purf, pyca1, rpob, succ)
B.cereus ATCC10876Other, contaminated flask (1945) [well-studied strain used in many structural studies of the spore and exospore; two complete genomes sequenced for this strain with identical MLST sequences] MLST(P, ccpa, clpc, ftsa, gdpd, glpt, mdh, muts, panc, pyca1, rpob, succ, yhfl)
B.cereus AFS041711Plant, core (2014)USA, North CarolinaMLST(K, adk, ccpa, dinb, ftsa, gdpd, glpt, gmk, panc, pta, purh, pyre, tpi, yhfl)
B.c_group AR7-3#1Soil (2012) [sequences conflicting with isolate AR7-3#2]ArgentinaMLST(P)
B.cereus B06_011HumanFranceMLST(TH)
B.cereus BGSC6A3#1[Wild type isolate; host for transducing phages CP51 and CP54; sequences conflicting with isolate BGSC6A3#2] MLST(P)
B.weihenstephanensis BGSC6A24  MLST(P)
B.cereus R70Other, mutant of strain NCTC 7464 for production of constitutive penicillinase MLST(P)

2 isolate(s) sharing typing data in supercluster 150

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StrainSourceLocationShared Typing Data
B.c_group AH512Soil, leaf and grass compost (1993)Norway, MossAFLP1
B.c_group AH546Soil, cabbage field (1993)Norway, MossAFLP1

2 isolate(s) sharing typing data in supercluster 151

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StrainSourceLocationShared Typing Data
B.thuringiensis HD616  AFLP2
B.thuringiensis HD627  AFLP2

5 isolate(s) sharing typing data in supercluster 152

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StrainSourceLocationShared Typing Data
B.toyonensis AFS073128Plant, Corn grainbin dust (2013)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS025179Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS086130Plant, Corn grainbin dust (2013)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS085003Plant, Corn grainbin dust (2013)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS034699Plant, Corn root (2014)USA, IowaMLST(K, CS, adk, ccpa, ftsa, gmk, ilvd, pta, purh, pyre, recf, tpi)

2 isolate(s) sharing typing data in supercluster 153

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StrainSourceLocationShared Typing Data
B.c_group 172Soil (2000)PolandMLST(P)
B.c_group 207Soil (2000)PolandMLST(P)

2 isolate(s) sharing typing data in supercluster 154

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StrainSourceLocationShared Typing Data
B.wiedmannii AFS098222Plant, Soybean leaf (2014)USA, MinnesotaMLST(CS, adk, ccpa, ftsa, gmk, gyrb, ilvd, mbl, mdh, muts, pta, purh, pyre, succ)
B.cereus MHI226Dairy products, milk and milk productsGermanyMLST(CS, adk, ccpa, ftsa, gmk, gyrb, ilvd, mbl, mdh, muts, pta, purh, pyre, succ)

6 isolate(s) sharing typing data in supercluster 155

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StrainSourceLocationShared Typing Data
B.wiedmannii AFS080060Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS068272Plant, Corn root (2014)USA, IowaMLST(TH, H, K, P, dinb, gdpd, purf, yhfl)
B.wiedmannii AFS038775Plant, Corn root (2014)USA, IowaMLST(TH, H, K, P, clpc, dinb, purf, yhfl)
B.wiedmannii AFS069985Soil (2014)USA, New YorkMLST(K, P, ccpa, clpc, dinb, ftsa, gdpd, glpt, panc, purf, pyre, recf, succ)
B.wiedmannii AFS065610Soil (2014)USA, New YorkMLST(CS, ftsa, glpf, glpt, gmk, gyrb, ilvd, mbl, mdh, muts, purh, pyca2, pyre, recf, rpob, succ, tpi)
B.c_group BF10-6Soil (2012)Burkina FasoMLST(P)

2 isolate(s) sharing typing data in supercluster 156

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StrainSourceLocationShared Typing Data
B.cereus MM3Food (2003) [sequences conflicting with isolate BGSC6A71]USAMLST(K, adk, clpc, dinb, ftsa, panc, pta, pyca2, recf, succ)
B.cereus B4077Food, chilled dessert (2012)NetherlandsMLST(K, adk, clpc, dinb, ftsa, panc, pta, pyca2, recf, succ)

5 isolate(s) sharing typing data in supercluster 157

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StrainSourceLocationShared Typing Data
B.cereus SDAKA96Dairy products, raw milk (1997)SwedenAFLP3 MLST(TH, H, P, clpc, dinb, gdpd, gyrb, mdh, muts, pyca1, rpob)
B.cereus MOD1Bc80Food, Whole Black Pepper (2015)USA, MarylandMLST(H, clpc, dinb, gdpd, glpf, gmk, gyrb, ilvd, mdh, muts, panc, purh, pyca1, pyca2, rpob)
B.c_group BC00034Dairy products, milk products (2017)Italy, ApuliaMLST(P)
B.cereus F4433/73Food, meat loaf implicated in gastroenteritis outbreak (1973) [diarrheal food poisoning outbreak]USA, CaliforniaAFLP2 AFLP3
B.cereus R3[Food Research Institute, University of Wisconsin-Madison]USA, Wisconsin, MadisonAFLP2

6 isolate(s) sharing typing data in supercluster 158

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StrainSourceLocationShared Typing Data
B.weihenstephanensis SDAGO95(1997)SwedenMLST(K, P, adk, ccpa, clpc, ftsa, glpt, purf, pyre, recf, yhfl)
B.c_group VD118SoilGuadeloupeMLST(K, P, adk, ccpa, clpc, ftsa, glpt, purf, pyre, recf, yhfl)
B.c_group T0-8.a.iSoil (2006)UKMLST(P)
B.c_group T0-3.b.iSoil (2006)UKMLST(P)
B.cereus 58R1Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. hereward grown in a plot in which the previous crop was wheat (Triticum aestivum) var. cadenza]UK, England, RothamstedMLST(P)
B.thuringiensis PLBPN42/2Soil (2012)PolandMLST(P)

24 isolate(s) sharing typing data in supercluster 159

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StrainSourceLocationShared Typing Data
B.anthracis AFS015248(2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus BcFL2013  MLST(TH, H, K, CS, P)
B.cereus G9241#1Human, sputum and blood (1994) [human pneumonia; carries pXO1 plasmid with anthrax virulence genes and produces a polysaccharide capsule; two complete genomes sequenced for this strain with identical MLST sequences]USA, LouisianaMLST(TH, H, K, CS, P)
B.anthracis AFS020887Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.anthracis AFS032990Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.anthracis AFS092859Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.anthracis AFS085583Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus BC-AKAnimal, kangaroo (2016)China, GuangxiMLST(TH, H, K, CS, P)
B.anthracis AFS001713Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.anthracis AFS072900Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.anthracis AFS048113Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.anthracis AFS037377Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus LA2007Human, blood and BAL (2007)USA, Louisiana, GallianoMLST(TH, H, K, CS, P)
B.cereus 03BB87Human, blood (2003) [human fatal pneumonia; carries pXO1 plasmid with anthrax virulence genes and produces a polysaccharide capsule]USA, TexasMLST(TH, H, K, CS, P)
B.anthracis AFS079591Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus FM1  MLST(K, CS, P, ccpa, ftsa, glpt, pyre, recf, succ)
B.anthracis AFS017475Plant, Corn core (2014)USA, IllinoisMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.anthracis AFS016024Soil (2014)USA, North CarolinaMLST(TH, H, K, P, clpc, dinb, purf, yhfl)
B.anthracis AFS093149Plant, Weed core (2014)USA, North CarolinaMLST(TH, K, CS, P, ftsa, pyre, succ)
B.anthracis AFS060304Plant, Wheat plant (2014)USA, North CarolinaMLST(TH, H, CS, P, gyrb, mbl, mdh, muts, rpob)
B.anthracis AFS058037Plant, core (2014)USA, North CarolinaMLST(H, K, clpc, dinb, gdpd, glpf, gmk, ilvd, panc, purf, purh, pyca2, tpi)
B.anthracis AFS062118Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, P, clpc, dinb, gyrb, mdh, muts, purf, pyca1, rpob, yhfl)
B.cereus G9898Human, sputum (1996) [human fatal pneumonia; produces a polysaccharide capsule]USA, LouisianaMLST(P)
B.cereus BOB4/2Dairy products, milk products (2014)PolandMLST(P)

3 isolate(s) sharing typing data in supercluster 160

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StrainSourceLocationShared Typing Data
B.thuringiensis Bt185Soil (2002)ChinaMLST(TH, H, K, CS, P)
B.thuringiensis 78-2Soil (2003)China, Hebei, BaodingMLST(TH, H, K, CS, P)
B.cereus BGSC6A25[Wild type isolate] MLST(P)

4 isolate(s) sharing typing data in supercluster 161

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StrainSourceLocationShared Typing Data
B.thuringiensis HD14 CzechoslovakiaAFLP2
B.thuringiensis HD39  AFLP2
B.thuringiensis HD15  AFLP2
B.thuringiensis HD120Animal, Insect, tobacco moth/cacao moth/warehouse moth (Ephestia elutella)UK, EnglandAFLP2

2 isolate(s) sharing typing data in supercluster 162

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StrainSourceLocationShared Typing Data
B.c_group AH568Soil, beech grove (1993)Norway, MossAFLP1
B.c_group AH567Soil, beech grove (1993)Norway, MossAFLP1

10 isolate(s) sharing typing data in supercluster 163

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StrainSourceLocationShared Typing Data
B.c_group A4o5Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group B4o2Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group A4s6Soil (2002)UK, England, BerkshireMLST(P)
B.weihenstephanensis Bw205Food (2005)UK, Wales, CardiffMLST(P)
B.c_group A4i2Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.weihenstephanensis Bw178Food (2005)UK, Wales, CardiffMLST(P)
B.c_group HuA2-4SoilBelgiumMLST(P)
B.weihenstephanensis Bw175Food (2005)UK, Wales, CardiffMLST(P)
B.weihenstephanensis Bw176Food (2005)UK, Wales, CardiffMLST(P)
B.c_group A3s3Soil (2002)UK, England, BerkshireMLST(P)

2 isolate(s) sharing typing data in supercluster 164

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StrainSourceLocationShared Typing Data
B.c_group B4o7Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group B4i1Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)

2 isolate(s) sharing typing data in supercluster 165

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StrainSourceLocationShared Typing Data
B.thuringiensis T18002(1980)USAMLST(P)
B.thuringiensis HD867Animal, Insect, litter of silkworm (Bombyx mori) [two complete genomes sequenced for this strain with identical MLST sequences]JapanMLST(P)

2 isolate(s) sharing typing data in supercluster 166

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StrainSourceLocationShared Typing Data
B.cereus Bc248 BrazilMLST(P)
B.cereus LFB586Human, Urinary infection (<2000)BrazilMLST(P)

6 isolate(s) sharing typing data in supercluster 167

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StrainSourceLocationShared Typing Data
B.mycoides SDAGO280Dairy products, milk [from dairy silo tank] AFLP3
B.mycoides SDAGR8Dairy products, milk [from dairy silo tank] AFLP3
B.mycoides SDAMA280Dairy products, milk [from dairy silo tank] AFLP3
B.mycoides SDAKA25Dairy products, milk [from dairy silo tank] AFLP3
B.mycoides SDANFMO426Dairy products, milk [from dairy silo tank] AFLP3
B.mycoides SDAMA50Dairy products, milk [from dairy silo tank] AFLP3

8 isolate(s) sharing typing data in supercluster 168

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StrainSourceLocationShared Typing Data
B.cereus AFS022412Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS031232(2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS095928Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS077312Plant, core (2014)USA, North CarolinaMLST(TH, H, K, P, clpc, gdpd, purf, yhfl)
B.cereus AFS071554(2014)USA, North CarolinaMLST(TH, K, CS, ftsa, gmk, ilvd, recf, succ, tpi)
B.cereus AFS039717Plant, core (2014)USA, North CarolinaMLST(K, CS, adk, ftsa, glpf, glpt, gmk, ilvd, pta, pyca2, pyre, recf, succ, tpi)
B.cereus AFS042177Plant, core (2014)USA, North CarolinaMLST(K, adk, clpc, dinb, ftsa, gdpd, gmk, ilvd, panc, pta, purf, pyca2, pyre, recf, succ)
B.cereus AFS074533Plant, core (2014)USA, North CarolinaMLST(TH, clpc, ftsa, gdpd, gmk, gyrb, mdh, purf, pyca1, recf, rpob, succ, tpi, yhfl)

31 isolate(s) sharing typing data in supercluster 169

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StrainSourceLocationShared Typing Data
B.pseudomycoides AFS054612Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS089336Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.pseudomycoides AFS000475Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS092470Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS053905Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.pseudomycoides AFS098141Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.pseudomycoides AFS076343Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS026857Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS009893Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS009709Plant, Soybean root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS065710Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS056801Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS088632Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS024178Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS004741Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS022225Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS079122Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS088703Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS068816Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS095077Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS008320Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS074688Plant, Soybean leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS052781Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.pseudomycoides AFS012367Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS040503Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS065668Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS080276Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.pseudomycoides AFS001949Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS080374Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.pseudomycoides AFS056690Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS049531Soil (2014)USA, IowaMLST(TH, H, K, CS, gmk, ilvd, purh)

4 isolate(s) sharing typing data in supercluster 170

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StrainSourceLocationShared Typing Data
B.thuringiensis HD602 JapanAFLP2
B.thuringiensis HD612Other, silkworm farmJapanAFLP2
B.thuringiensis HD603 JapanAFLP2
B.thuringiensis HD625 JapanAFLP2

3 isolate(s) sharing typing data in supercluster 171

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StrainSourceLocationShared Typing Data
B.cereus AFS036086Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS040627Soil (2013)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS013362Plant, Corn (2014)USA, IowaMLST(P, adk, dinb, ftsa, gdpd, glpt, gyrb, mdh, muts, panc, purf, pyca1, pyre, recf, succ)

4 isolate(s) sharing typing data in supercluster 172

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StrainSourceLocationShared Typing Data
B.thuringiensis IBL3727Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3723Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3721Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3722Soil (2009)USA, MarylandMLST(P)

3 isolate(s) sharing typing data in supercluster 173

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StrainSourceLocationShared Typing Data
B.mycoides 219298  MLST(TH, H, K, CS, P)
B.cereus BcAlHakamOther, suspected bioweapons facilityIraqMLST(TH, H, K, CS, P)
B.c_group KW58[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)

2 isolate(s) sharing typing data in supercluster 174

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StrainSourceLocationShared Typing Data
B.cereus LFB513Food, rice mousse (1987)BrazilMLST(P)
B.cereus Bc234 BrazilMLST(P)

4 isolate(s) sharing typing data in supercluster 175

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StrainSourceLocationShared Typing Data
B.mycoides SDANFMO255Dairy products, milk [from dairy silo tank] AFLP3
B.mycoides SDANFMO251Dairy products, milk [from dairy silo tank] AFLP3
B.mycoides SDANFMO319Dairy products, milk [from dairy product tank] AFLP3
B.mycoides SDAGO169Dairy products, milk [from dairy silo tank] AFLP3

3 isolate(s) sharing typing data in supercluster 176

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StrainSourceLocationShared Typing Data
B.pseudomycoides AFS022493Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS047869Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.mycoides AFS043018Soil (2014)USA, North CarolinaMLST(K, adk, ccpa, dinb, ftsa, glpt, ilvd, panc, pta, purf, purh, recf, tpi, yhfl)

6 isolate(s) sharing typing data in supercluster 177

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StrainSourceLocationShared Typing Data
B.c_group E2s2Soil (2002)UK, England, BerkshireMLST(P)
B.weihenstephanensis SDANFFE664Dairy water hose (1997) [from the same dairy as isolates SDANFFE640 and SDANFFE647]Norway (Southern)MLST(P)
B.cereus 8R1Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. hereward grown in a plot in which the previous crop was wheat (Triticum aestivum) var. cadenza]UK, England, RothamstedMLST(P)
B.cereus 8R5Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. hereward grown in a plot in which the previous crop was wheat (Triticum aestivum) var. cadenza]UK, England, RothamstedMLST(P)
B.cereus 25R2Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. x:19 grown in a plot in which the previous crop was wheat (Triticum aestivum) var. cadenza]UK, England, RothamstedMLST(P)
B.cereus 25R1Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. x:19 grown in a plot in which the previous crop was wheat (Triticum aestivum) var. cadenza]UK, England, RothamstedMLST(P)

4 isolate(s) sharing typing data in supercluster 178

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StrainSourceLocationShared Typing Data
B.c_group VD154SoilUAE, Abu DhabiMLST(TH, H, K, CS, P)
B.thuringiensis Sbt003Soil (2010)China, Hubei ProvinceMLST(TH, H, K, CS, P)
B.thuringiensis T13001Animal, Insect, Lepidoptera (1976)PakistanMLST(TH, H, K, CS, P)
B.thuringiensis T13004Animal, Insect, Lepidoptera (1980)PakistanMLST(P)

2 isolate(s) sharing typing data in supercluster 179

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StrainSourceLocationShared Typing Data
B.thuringiensis PLJAS83/3Soil (2012) [MLST data different from isolate JAS83/3]PolandMLST(P)
B.weihenstephanensis JAS83/3Soil (2011) [MLST data different from isolate PL JAS83/3]PolandMLST(P)

3 isolate(s) sharing typing data in supercluster 180

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StrainSourceLocationShared Typing Data
B.cereus 164667.SHuman, wound infection (2004)UK, ScotlandMLST(P)
B.cereus 161716.ZHuman, wound infection (2004)UK, ScotlandMLST(P)
B.cereus 162046.WHuman, wound infection (2004)UK, ScotlandMLST(P)

2 isolate(s) sharing typing data in supercluster 181

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StrainSourceLocationShared Typing Data
B.c_group AH557Soil, cabbage field (1993)Norway, MossAFLP1
B.c_group AH551Soil, cabbage field (1993)Norway, MossAFLP1

2 isolate(s) sharing typing data in supercluster 182

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StrainSourceLocationShared Typing Data
B.cereus D21Food; Food Research Institute, University of Wisconsin-MadisonUSA, Wisconsin, MadisonAFLP2
B.cereus F2-19[Food Research Institute, University of Wisconsin-Madison]USA, Wisconsin, MadisonAFLP2

3 isolate(s) sharing typing data in supercluster 183

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StrainSourceLocationShared Typing Data
B.pseudomycoides AFS074290Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS099912Plant, Corn (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS035137Plant, Corn root (2014)USA, IowaMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)

6 isolate(s) sharing typing data in supercluster 184

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StrainSourceLocationShared Typing Data
B.cereus AFS081482Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS067617Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS007793Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS030046Plant, Soybean root (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.cereus AFS033440Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS030475(2014)USA, IowaMLST(TH, H, K, CS, P)

2 isolate(s) sharing typing data in supercluster 185

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StrainSourceLocationShared Typing Data
B.cereus IMSNU13043  MLST(K)
B.cereus IMSNU11014SoilKoreaMLST(K)

2 isolate(s) sharing typing data in supercluster 186

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StrainSourceLocationShared Typing Data
B.cereus NM12BC68Soil (2012)China, Inner MongoliaMLST(P)
B.cereus NM12BC54Soil (2012)China, Inner MongoliaMLST(P)

2 isolate(s) sharing typing data in supercluster 187

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StrainSourceLocationShared Typing Data
B.thuringiensis AFS058004Plant, Corn grainbin dust (2013)USA, IowaMLST(TH, H, K, CS, P)
B.cereus NJ-WSoil (2014)China, Zhongshan mountain, NanjingMLST(TH, H, K, CS, P)

8 isolate(s) sharing typing data in supercluster 188

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StrainSourceLocationShared Typing Data
B.cereus AFS029792Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.c_group BAG2O-1SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.cereus AFS057725Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.c_group BAG1X1-1SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.c_group BAG1X2-3SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.c_group BAG1X2-1SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.c_group BAG1X2-2SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.c_group MCCC1A05691Other, sediments (2008)South China SeaMLST(P)

2 isolate(s) sharing typing data in supercluster 189

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StrainSourceLocationShared Typing Data
B.c_group T0-19.b.iSoil (2006)UKMLST(P)
B.c_group T0-15.b.iSoil (2006)UKMLST(P)

3 isolate(s) sharing typing data in supercluster 190

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StrainSourceLocationShared Typing Data
B.thuringiensis BGSC4BX1Soil, sandy soilChinaMLST(H, P)
B.c_group KW34[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.thuringiensis CEB02/074[Pasteur Institute]France, ParisMLST(H)

5 isolate(s) sharing typing data in supercluster 191

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StrainSourceLocationShared Typing Data
B.c_group AH518Soil, strawberry field (1993)Norway, MossAFLP1
B.c_group AH531Soil, strawberry field (1993)Norway, MossAFLP1
B.c_group AH576Soil, beech grove (1993)Norway, MossAFLP1
B.c_group AH541Soil, strawberry field (1993)Norway, MossAFLP1
B.c_group AH520Soil, strawberry field (1993)Norway, MossAFLP1

2 isolate(s) sharing typing data in supercluster 192

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StrainSourceLocationShared Typing Data
B.cereus 153804.YHuman, wound infection (2004)UK, ScotlandMLST(P)
B.cereus BGSC6A87Human, wound infection (2004) [sequences conflicting with isolate 141774.P]UK, ScotlandMLST(P)

3 isolate(s) sharing typing data in supercluster 193

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StrainSourceLocationShared Typing Data
B.cereus FSoil, ancient permafrost aged nearly 3 million yearsRussia, YakutiaMLST(TH, H, K, CS, P)
B.cereus MOD1Bc135Food, Dietary Supplements (2015)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus G2054Food (1988) [diarrheal food poisoning; from the same incident as isolate G2055]USA, PennsylvaniaMLST(P)

2 isolate(s) sharing typing data in supercluster 194

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StrainSourceLocationShared Typing Data
B.cereus ATCC43881Animal, earthworm gut AFLP2
B.thuringiensis HD592Other, silkworm farmJapanAFLP2

2 isolate(s) sharing typing data in supercluster 195

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StrainSourceLocationShared Typing Data
B.thuringiensis B3001Soil MLST(P)
B.thuringiensis B3044Soil MLST(P)

10 isolate(s) sharing typing data in supercluster 196

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StrainSourceLocationShared Typing Data
B.cereus AFS072097Plant, Tomato plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS002368Plant, Tomato plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus S6582Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6578Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6593Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6582aSoil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6565Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6583Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6622Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6615Soil (2007)USA, Maryland, RockvilleMLST(P)

5 isolate(s) sharing typing data in supercluster 197

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StrainSourceLocationShared Typing Data
B.thuringiensis BGSC4BB1 Korea (South)MLST(TH, H, K, CS, P)
B.thuringiensis BGSC4BC1SoilChinaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4AL1(1994)Korea (South)MLST(TH, H, K, CS, P)
B.thuringiensis BGSC4BG1Plant, leaves of ivyDenmarkMLST(TH, H, K, CS, P)
B.c_group KW44[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)

2 isolate(s) sharing typing data in supercluster 198

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StrainSourceLocationShared Typing Data
B.cereus S612Other, groundwater (2015)USAMLST(H, clpc, dinb, gdpd, glpf, gmk, gyrb, mdh, panc, pyca1, pyca2, rpob, tpi)
B.wiedmannii AFS044295Plant, Soybean root (2014)USA, IowaMLST(H, clpc, dinb, gdpd, glpf, gmk, gyrb, mdh, panc, pyca1, pyca2, rpob, tpi)

2 isolate(s) sharing typing data in supercluster 199

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StrainSourceLocationShared Typing Data
B.thuringiensis HD966  AFLP2
B.thuringiensis HD65  AFLP2

2 isolate(s) sharing typing data in supercluster 200

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StrainSourceLocationShared Typing Data
B.c_group SH8-8Soil (2011)KenyaMLST(P)
B.c_group AR4-1Soil (2012)ArgentinaMLST(P)

7 isolate(s) sharing typing data in supercluster 201

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StrainSourceLocationShared Typing Data
B.cytotoxicus CH25Food, Mashed potatoes (2014)SwitzerlandMLST(TH, K, CS, P, ftsa, pyre, succ)
B.cytotoxicus CH13Food, Mashed potatoes (2015)SwitzerlandMLST(TH, K, CS, P, ftsa, pyre, succ)
B.cytotoxicus CH23Food, Mashed potatoes (2015)SwitzerlandMLST(TH, K, CS, P, ftsa, pyre, succ)
B.cytotoxicus CH1Food, Mashed potatoes (2015)SwitzerlandMLST(TH, K, CS, P, ftsa, pyre, succ)
B.cytotoxicus CVUAS2833Food, potato puree (2007) [related to food poisoning]GermanyMLST(TH, K, CS, P, ftsa, pyre, succ)
B.cytotoxicus NVH0391/98Food, Vegetable puree (1998) [diarrheal food poisoning outbreak, fatal]France, EssoneMLST(TH, K, CS, P, ftsa, pyre)
B.cytotoxicus INRAAF2Food, potato puree (2003) [connected to a food poisoning case]FranceMLST(TH)

3 isolate(s) sharing typing data in supercluster 202

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StrainSourceLocationShared Typing Data
B.cereus S6628Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6629Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6631Soil (2007)USA, Maryland, RockvilleMLST(P)

8 isolate(s) sharing typing data in supercluster 203

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StrainSourceLocationShared Typing Data
B.anthracis AFS068624Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.anthracis AFS023305Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.anthracis AFS025007Plant, Corn core (2014)USA, North CarolinaMLST(TH, K, CS, P, ftsa, recf, succ)
B.anthracis AFS029987Plant, tree leaf (2014)USA, North CarolinaMLST(H, K, P, clpc, dinb, gdpd, purf, yhfl)
B.anthracis AFS022655Plant, Corn core (2014)USA, North CarolinaMLST(TH, K, CS, ftsa, gmk, purh, pyre, recf, tpi)
B.cereus AFS012518Plant, Weed core (2014)USA, North CarolinaMLST(TH, K, clpc, dinb, ftsa, gdpd, gmk, purf, purh, pyre, recf, tpi)
B.thuringiensis AFS065631Plant, core (2014)USA, North CarolinaMLST(H, dinb, gdpd, glpf, gmk, gyrb, ilvd, mdh, pta, purh, pyca1, pyca2, rpob, yhfl)
B.cereus FSLM8-0117Dairy products, Laboratory Heat Treated Raw Milk (2012)USA, New YorkMLST(TH, clpc, dinb, gdpd, gyrb, mbl, muts, purh, pyca1, rpob)

12 isolate(s) sharing typing data in supercluster 204

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StrainSourceLocationShared Typing Data
B.thuringiensis KBBD1Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBA5Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBC8Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBA2Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBA3Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBA1Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBC3Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBC5Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBA8Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBAF5Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBAF1Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBAF8Soil, Forest soil (2000)France, VersaillesMLST(CS)

5 isolate(s) sharing typing data in supercluster 205

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StrainSourceLocationShared Typing Data
B.cereus 44R2Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. hereward grown in a plot in which the previous crop was wheat (Triticum aestivum) var. hereward]UK, England, RothamstedMLST(P)
B.cereus 44R1Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. hereward grown in a plot in which the previous crop was wheat (Triticum aestivum) var. hereward]UK, England, RothamstedMLST(P)
B.cereus 35R1Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. x:19 grown in a plot in which the previous crop was wheat (Triticum aestivum) var. cadenza]UK, England, RothamstedMLST(P)
B.cereus 44R5Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. hereward grown in a plot in which the previous crop was wheat (Triticum aestivum) var. hereward]UK, England, RothamstedMLST(P)
B.c_group D28-15.A.iSoil (2006)UKMLST(P)

4 isolate(s) sharing typing data in supercluster 206

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StrainSourceLocationShared Typing Data
B.c_group AH648Soil, heather soil (1994)Norway, SteigenAFLP1 AFLP2
B.c_group AH657Soil, woodland soil (1994)Norway, BrekkvasselvAFLP1
B.c_group AH637Soil, heather soil (1994)Norway, Singsaas/SaeterengAFLP1
B.c_group AH521Soil, strawberry field (1993)Norway, MossAFLP2

4 isolate(s) sharing typing data in supercluster 207

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StrainSourceLocationShared Typing Data
B.thuringiensis IBL4Soil (1986)USA, NevadaMLST(P)
B.cereus 16-00193  MLST(P)
B.thuringiensis IBL1306Soil (1987)USA, CaliforniaMLST(P)
B.thuringiensis IBL1302Soil (1986)TurkeyMLST(P)

4 isolate(s) sharing typing data in supercluster 208

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StrainSourceLocationShared Typing Data
B.c_group KW41[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.cereus BGSC6A36Soil, heather soil (1994) [sequences conflicting with isolate AH647]Norway, SteigenMLST(P)
B.mycoides BGSC6A47Dairy products, milk products (1999) [sequences conflicting with isolate WSBC10277]GermanyMLST(P)
B.c_group BGSC4AZ3  MLST(P)

2 isolate(s) sharing typing data in supercluster 209

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StrainSourceLocationShared Typing Data
B.cereus R-20462Food, gelatine AFLP3
B.cereus R-20460Food, gelatine AFLP3

2 isolate(s) sharing typing data in supercluster 210

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StrainSourceLocationShared Typing Data
B.thuringiensis BGSC4BD1 ChinaMLST(P)
B.c_group KW51[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)

4 isolate(s) sharing typing data in supercluster 211

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StrainSourceLocationShared Typing Data
B.c_group AH1270Human, cervix; Reykjavik University Hospital (2000) [from the same hospital as isolates AH1271, AH1272, and AH1273]Iceland, ReykjavikMLST(TH, H)
B.cereus NVH0674/98Food, Scrambled eggs or mashed swede (1998) [diarrheal food poisoning outbreak]NorwayMLST(TH, H)
B.cereus B06_021Human, bloodFranceMLST(TH)
B.cereus B06_022Human, bloodFranceMLST(TH)

2 isolate(s) sharing typing data in supercluster 212

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StrainSourceLocationShared Typing Data
B.thuringiensis HD993  AFLP2
B.thuringiensis HD857  AFLP2

3 isolate(s) sharing typing data in supercluster 213

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StrainSourceLocationShared Typing Data
B.c_group B4o8Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group PL29SoilPolandMLST(P)
B.c_group PL22Soil MLST(P)

3 isolate(s) sharing typing data in supercluster 214

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StrainSourceLocationShared Typing Data
B.c_group AH626Soil, heather soil (1994)Norway, Singsaas/SaeterengAFLP1 AFLP2
B.c_group AH625Soil, heather soil (1994)Norway, Singsaas/SaeterengAFLP1
B.c_group AH631Soil, heather soil (1994)Norway, Singsaas/SaeterengAFLP2

2 isolate(s) sharing typing data in supercluster 215

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StrainSourceLocationShared Typing Data
B.c_group AY2-1Soil (2012)KazakhstanMLST(P)
B.thuringiensis T08009#2[sequences conflicting with isolate T08009#1] MLST(P)

5 isolate(s) sharing typing data in supercluster 216

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StrainSourceLocationShared Typing Data
B.cereus BCT7Other, dry towel (2005)JapanMLST(P)
B.cereus BC3Human (2005)JapanMLST(P)
B.cereus BCT6Other, steamed towel (2005)JapanMLST(P)
B.cereus FSLW8-0932Dairy products, Liquid skim milk CLT (2013)USA, New YorkMLST(P)
B.c_group Bsp4Human (2005)JapanMLST(P)

2 isolate(s) sharing typing data in supercluster 217

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StrainSourceLocationShared Typing Data
B.c_group AH661Soil, woodland soil (1994)Norway, BrekkvasselvAFLP1
B.c_group AH668Soil, woodland soil (1994)Norway, BrekkvasselvAFLP1

2 isolate(s) sharing typing data in supercluster 218

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StrainSourceLocationShared Typing Data
B.cereus F3-27[Food Research Institute, University of Wisconsin-Madison]USA, Wisconsin, MadisonAFLP2
B.cereus Soc67Human, periodontitis AFLP2

10 isolate(s) sharing typing data in supercluster 219

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StrainSourceLocationShared Typing Data
B.anthracis CEB95-0002Animal AFLP3
B.anthracis CEB95-0007Animal AFLP3
B.anthracis CEB94-0042Animal AFLP3
B.anthracis CEB96-0002Animal AFLP3
B.anthracis CEB94-0033Animal AFLP3
B.anthracis CEB95-0034Animal AFLP3
B.anthracis CEB95-0031Animal AFLP3
B.anthracis CEB94-0041Animal AFLP3
B.anthracis CEB95-0033Animal AFLP3
B.anthracis CEB94-0039Animal AFLP3

2 isolate(s) sharing typing data in supercluster 220

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StrainSourceLocationShared Typing Data
B.c_group 36Food (2014)China, TianjinMLST(P)
B.c_group 14Food (2014)China, TangshanMLST(P)

6 isolate(s) sharing typing data in supercluster 221

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StrainSourceLocationShared Typing Data
B.toyonensis AFS030602Plant, Tomato plant (2014)USA, North CarolinaMLST(TH, H, CS, P, mbl, muts, pyca1, rpob)
B.thuringiensis MC28Soil, virgin forest soilChina, Mu Chuan virgin forest, Sichuan ProvinceMLST(K, P, adk, clpc, dinb, ftsa, glpt, panc, pyre, recf, succ, yhfl)
B.toyonensis AFS067491Soil (2014)USA, North CarolinaMLST(TH, H, clpc, dinb, gdpd, gyrb, ilvd, mbl, muts, purf, purh, pyca1, rpob, tpi)
B.thuringiensis BGSC4AQ1SoilKorea (South)MLST(P, ccpa, clpc, dinb, ftsa, gdpd, glpt, gyrb, mdh, muts, purf, pyca1, pyre, recf, rpob, succ, yhfl)
B.toyonensis AFS049861Plant, Wheat plant (2014)USA, North CarolinaMLST(H, clpc, glpf, gmk, gyrb, ilvd, muts, pta, purh, pyca1, pyca2, rpob, yhfl)
B.cereus NC543Food (1983)JapanMLST(P)

6 isolate(s) sharing typing data in supercluster 222

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StrainSourceLocationShared Typing Data
B.thuringiensis AFS098399Plant, Soybean leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS022504Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS063736Plant, Soybean root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS050081Plant, Soybean root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS056009(2014)USA, IowaMLST(TH, H, K, CS, gmk, purh, tpi)
B.thuringiensis YBT-1518Soil [high toxicity to nematode]China, Jianghan Plain, HubeiMLST(K, CS, adk, ccpa, ftsa, glpf, gmk, ilvd, purh, pyca2, pyre, recf, succ, tpi)

2 isolate(s) sharing typing data in supercluster 223

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StrainSourceLocationShared Typing Data
B.c_group 2A6[Pasteur Institute]France, ParisMLST(P)
B.c_group 2C1Soil [non-pathogenic; Pasteur Institute]France, ParisMLST(P)

15 isolate(s) sharing typing data in supercluster 224

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StrainSourceLocationShared Typing Data
B.cereus AFS079395Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.c_group BAG1X1-3SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.cereus AFS071894Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS098983Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS059087Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS031287Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS007907Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS033388Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS052321Soil (2014)USA, New YorkMLST(TH, H, K, CS, ilvd, purh, tpi)
B.c_group BAG1O-1SoilUSA, Massachusetts, BostonMLST(TH, H, CS, P, gyrb, mbl, mdh, muts, pyca1)
B.cereus AFS085075Soil (2014)USA, New YorkMLST(TH, H, K, CS, gmk, ilvd, purh)
B.cereus AFS034785Plant, core (2014)USA, North CarolinaMLST(TH, H, K, P, clpc, dinb, gdpd, yhfl)
B.mycoides SB13Soil (2016)NetherlandsMLST(TH, H, K, clpc, dinb, gmk, ilvd, purf, purh, yhfl)
B.cereus AFS084444(2014)USA, North CarolinaMLST(H, clpc, glpf, gmk, gyrb, ilvd, mbl, muts, panc, purf, purh, pyca2, tpi, yhfl)
B.cereus AFS002757Soil (2014)USA, New YorkMLST(H, clpc, gmk, gyrb, mdh, muts, purf, purh, pyca1, pyca2, tpi)

2 isolate(s) sharing typing data in supercluster 225

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StrainSourceLocationShared Typing Data
B.anthracis CEB00-0201Animal AFLP3
B.anthracis CEB94-0040Animal AFLP3

4 isolate(s) sharing typing data in supercluster 226

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StrainSourceLocationShared Typing Data
B.c_group AH665Soil, woodland soil (1994)Norway, BrekkvasselvAFLP1 AFLP2
B.c_group AH678Soil, heather soil (1994)Norway, TromsoeAFLP1 AFLP2
B.c_group AH664Soil, woodland soil (1994)Norway, BrekkvasselvAFLP1
B.c_group AH666Soil, woodland soil (1994)Norway, BrekkvasselvAFLP1

2 isolate(s) sharing typing data in supercluster 227

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StrainSourceLocationShared Typing Data
B.thuringiensis HD530 UK, EnglandAFLP2
B.thuringiensis HD534  AFLP2

3 isolate(s) sharing typing data in supercluster 228

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StrainSourceLocationShared Typing Data
B.cereus MOD1Bc207Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, CS, P, gyrb, muts, rpob)
B.cereus MOD1Bc93Food, Ground Black Pepper (2015)USA, MarylandMLST(H, CS, gmk, gyrb, muts, pta, purh, pyca2, rpob, tpi)
B.c_group 20164Food (2013)ChinaMLST(P)

2 isolate(s) sharing typing data in supercluster 229

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StrainSourceLocationShared Typing Data
B.cereus 1952Human, blood (1955) [human fatal septicemia]USA, GeorgiaMLST(P)
B.cereus 2002734360Human, blood (1954) [human septicaemia, fatal]USA, GeorgiaMLST(P)

2 isolate(s) sharing typing data in supercluster 230

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StrainSourceLocationShared Typing Data
B.cereus AFS031451Plant, core (2014)USA, North CarolinaMLST(TH, H, K, P, clpc, dinb, gdpd, purf)
B.c_group BAG5X1-1SoilUSA, Massachusetts, BostonMLST(TH, H, K, P, clpc, dinb, gdpd, purf)

2 isolate(s) sharing typing data in supercluster 231

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StrainSourceLocationShared Typing Data
B.cereus AFS096268Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS065853Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)

2 isolate(s) sharing typing data in supercluster 232

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StrainSourceLocationShared Typing Data
B.cereus 03BR1283Human (2003) [Isolated from the same Texas patient as isolate 03BB102; human pneumonia, fatal]USA, TexasMLST(P)
B.cereus 03BB102Human, blood (2003) [human fatal pneumonia; carries pXO1 plasmid with anthrax virulence genes]USA, TexasMLST(P)

3 isolate(s) sharing typing data in supercluster 233

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StrainSourceLocationShared Typing Data
B.cereus CIAnimal, great apes (chimpanzees) (2001,2002) [previously named atypical B.anthracis because it carries pXO1 and pXO2 plasmids with anthrax virulence and polyglutamate capsule genes; produces a capsule]Ivory Coast, Tai National ParkMLST(K, P, adk, ccpa, clpc, dinb, ftsa, panc, purf, recf, succ, yhfl)
B.c_group ISP3191Food MLST(K, adk, clpc, dinb, ftsa, gmk, panc, purf, purh, pyca2, recf, succ, yhfl)
B.cereus CAAnimal, great apes (chimpanzee and gorilla) (2004,2005) [previously named atypical B.anthracis because it carries pXO1 and pXO2 plasmids with anthrax virulence and polyglutamate capsule genes; produces a capsule]Cameroon, Dja ReserveMLST(P, adk, ccpa, ftsa, recf)

2 isolate(s) sharing typing data in supercluster 234

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StrainSourceLocationShared Typing Data
B.cereus D33Food; Food Research Institute, University of Wisconsin-MadisonUSA, Wisconsin, MadisonAFLP2
B.thuringiensis HD30Animal, Insect, Prominent moth (Notodonta aniera)Czechoslovakia or USSRAFLP2

2 isolate(s) sharing typing data in supercluster 235

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StrainSourceLocationShared Typing Data
B.thuringiensis HD572 ChinaAFLP2
B.thuringiensis HD588  AFLP2

3 isolate(s) sharing typing data in supercluster 236

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StrainSourceLocationShared Typing Data
B.cereus BGSC6E1[produces chitinase] MLST(P)
B.cereus BGSC6A3#2[Wild type isolate; host for transducing phages CP51 and CP54; sequences conflicting with isolate BGSC6A3#1] MLST(P)
B.cereus BGSC6E2  MLST(P)

2 isolate(s) sharing typing data in supercluster 237

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StrainSourceLocationShared Typing Data
B.c_group KW6[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.thuringiensis BGSC4AF1SoilCameroonMLST(P)

3 isolate(s) sharing typing data in supercluster 238

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StrainSourceLocationShared Typing Data
B.c_group AH630Soil, heather soil (1994)Norway, Singsaas/SaeterengAFLP1 AFLP2
B.c_group AH646Soil, heather soil (1994)Norway, SteigenAFLP1
B.c_group AH550Soil, cabbage field (1993)Norway, MossAFLP2

4 isolate(s) sharing typing data in supercluster 239

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StrainSourceLocationShared Typing Data
B.weihenstephanensis GOE9Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(TH, H, K, CS, P)
B.weihenstephanensis GOE10Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(TH, H, K, CS, P)
B.weihenstephanensis GOE8Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(TH, H, K, CS, P)
B.cereus AFS041432Plant, Weed leaf (2014)USA, OhioMLST(TH, H, K, CS, P)

3 isolate(s) sharing typing data in supercluster 240

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StrainSourceLocationShared Typing Data
B.cereus BGSC6A98Human, wound infection (2004) [sequences conflicting with isolate 154145.Q]UK, ScotlandMLST(P)
B.cereus BGSC6A28Food, indonesian rice dish (1973) [food connected to illness, emetic food poisoning, emetic toxin/cereulide producer; sequences conflicting with isolate F4431/73]IndonesiaMLST(P)
B.cereus BGSC6A30[sequences conflicting with isolate S78] MLST(P)

9 isolate(s) sharing typing data in supercluster 241

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StrainSourceLocationShared Typing Data
B.cereus AFS089785Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus AFS079281Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus AFS086947Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus AFS042632Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus AFS002548Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS088199Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus AFS002224Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS066968Plant, Soybean root (2014)USA, MissouriMLST(TH, H, CS, P, mbl, mdh, muts, pyca1, rpob)
B.cereus AFS020540Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, P, clpc, dinb, gdpd, purf)

3 isolate(s) sharing typing data in supercluster 242

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StrainSourceLocationShared Typing Data
B.cereus S6642Soil (2007)USA, Maryland, RockvilleMLST(P)
B.thuringiensis AFS064137Soil (2014)USA, North CarolinaMLST(P)
B.cereus S6627Soil (2007)USA, Maryland, RockvilleMLST(P)

5 isolate(s) sharing typing data in supercluster 243

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StrainSourceLocationShared Typing Data
B.thuringiensis BGSC4BY1Plant, Scotch pine [sequences conflicting with isolate T61001]DenmarkMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4BJ1SoilPolandMLST(TH, H, K, CS, P)
B.thuringiensis T61001[sequences conflicting with isolate BGSC4BY1] MLST(TH, H, K, CS, P)
B.wiedmannii AFS002371Plant, Weed leaf (2014)USA, IndianaMLST(TH, H, clpc, gdpd, mbl, muts, purh, pyca1, rpob, tpi, yhfl)
B.c_group KW13[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)

3 isolate(s) sharing typing data in supercluster 244

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StrainSourceLocationShared Typing Data
B.cereus BC_42Dairy products, farm dairy products (2006)ItalyMLST(P)
B.cereus BC_43Dairy products, farm dairy products (2006)ItalyMLST(P)
B.cereus BC_44Dairy products, farm dairy products (2006)ItalyMLST(P)

2 isolate(s) sharing typing data in supercluster 245

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StrainSourceLocationShared Typing Data
B.cereus NM12BC62Soil (2012)China, Inner MongoliaMLST(P)
B.cereus NM12BC65Soil (2012)China, Inner MongoliaMLST(P)

2 isolate(s) sharing typing data in supercluster 246

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StrainSourceLocationShared Typing Data
B.cereus 9506 UKMLST(P)
B.cereus 2002734484Other, environmentalUSAMLST(P)

2 isolate(s) sharing typing data in supercluster 247

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StrainSourceLocationShared Typing Data
B.thuringiensis T08009#3[sequences conflicting with isolate T08009#2; due to conflicting MLST data between isolates T08009#1 and T08009#2 it cannot be determined to which isolate the AFLP data correspond to] AFLP2
B.thuringiensis HD711 ChinaAFLP2

2 isolate(s) sharing typing data in supercluster 248

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StrainSourceLocationShared Typing Data
B.wiedmannii AFS011906Plant, core (2014)USA, North CarolinaMLST(CS, adk, ccpa, ftsa, glpf, gmk, ilvd, mbl, mdh, muts, pyca1, pyca2, pyre, rpob, succ, tpi)
B.wiedmannii AFS045893Soil (2014)USA, North CarolinaMLST(CS, adk, ccpa, ftsa, glpf, gmk, ilvd, mbl, mdh, muts, pyca1, pyca2, pyre, rpob, succ, tpi)

3 isolate(s) sharing typing data in supercluster 249

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StrainSourceLocationShared Typing Data
B.thuringiensis HD198Animal, Insect, Raisin moth (Cadra figulilella)USAAFLP2
B.thuringiensis HD969  AFLP2
B.thuringiensis HD110 USAAFLP2

4 isolate(s) sharing typing data in supercluster 250

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StrainSourceLocationShared Typing Data
B.mycoides BGSC6A12[non-rhizoidal colony morphology] MLST(P)
B.mycoides BGSC6A11  MLST(P)
B.mycoides BGSC6A13[sequences conflicting with isolate ATCC6463] MLST(P)
B.cereus F77/2809aHuman (1977) [infant born very edematous]UKMLST(P)

3 isolate(s) sharing typing data in supercluster 251

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StrainSourceLocationShared Typing Data
B.thuringiensis HD83  AFLP2
B.thuringiensis HD82  AFLP2
B.thuringiensis HD84  AFLP2

3 isolate(s) sharing typing data in supercluster 252

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StrainSourceLocationShared Typing Data
B.c_group DM55Other, sea water, polluted marine environment (putatively identified as B.thuringiensis) MLST(P)
B.thuringiensis BGSC4B3  MLST(P)
B.cereus R_3039/03Human, blood (2003) [human septicaemia]UK, EnglandMLST(P)

2 isolate(s) sharing typing data in supercluster 253

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StrainSourceLocationShared Typing Data
B.weihenstephanensis INRASASoil AFLP3
B.weihenstephanensis WSBC10295Soil AFLP3

3 isolate(s) sharing typing data in supercluster 254

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StrainSourceLocationShared Typing Data
B.cereus 03BB108Other, dust in workspace associated with clinical case (isolate 03BR1283) (2003) [two complete genomes sequenced for this strain with identical MLST sequences]USA, TexasMLST(CS, P, adk, ftsa, glpt, gyrb, mdh, muts, pyca1, pyre, rpob, succ)
B.cereus MOD1Bc90Food, Whole Black Pepper (2015)USA, MarylandMLST(CS, adk, ftsa, glpt, gmk, gyrb, mdh, muts, purh, pyca1, pyca2, pyre, rpob, succ, tpi)
B.cereus D4214Human, blood (1975)USA, TexasMLST(P)

2 isolate(s) sharing typing data in supercluster 255

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StrainSourceLocationShared Typing Data
B.mycoides SDANFMO427Dairy products, milk [from dairy silo tank] AFLP3
B.mycoides SDAA29Other, manure AFLP3

3 isolate(s) sharing typing data in supercluster 256

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StrainSourceLocationShared Typing Data
B.cereus AFS058404Plant, Weed plant (2014)USA, North CarolinaMLST(TH, H, P, clpc, dinb, gyrb, mbl, mdh, muts, purf, rpob)
B.cereus R_3098/03Human, blood (2003) [human septicaemia]UK, EnglandMLST(TH, P, clpc, dinb, ftsa, gyrb, mdh, muts, purf, pyca1, pyre, rpob, succ)
B.cereus AFS029677Soil (2014)USA, North CarolinaMLST(TH, H, clpc, dinb, gmk, gyrb, mbl, mdh, purf, pyca1, rpob, tpi)

4 isolate(s) sharing typing data in supercluster 257

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StrainSourceLocationShared Typing Data
B.thuringiensis GOE2#1Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(TH, H, K, CS, P)
B.thuringiensis GOE1#1Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(TH, H, K, CS, P)
B.cereus MROC2Animal, Chicken/Red junglefowl (Gallus gallus) faeces/stools (2010)USA, California, Fresno CountyMLST(CS, adk, ftsa, glpf, gmk, gyrb, mdh, muts, pta, pyca1, pyca2, pyre, recf, rpob, succ)
B.cereus MOD1Bc73Food, Paprika (2015)USA, MarylandMLST(K, clpc, ftsa, glpf, glpt, gmk, panc, pta, pyca2, pyre, recf, succ, tpi, yhfl)

2 isolate(s) sharing typing data in supercluster 258

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StrainSourceLocationShared Typing Data
B.c_group A3m5Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group A3o2Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)

2 isolate(s) sharing typing data in supercluster 259

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StrainSourceLocationShared Typing Data
B.thuringiensis HD681  AFLP2
B.thuringiensis HD975  AFLP2

2 isolate(s) sharing typing data in supercluster 260

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StrainSourceLocationShared Typing Data
B.c_group AH542Soil, strawberry field (1993)Norway, MossAFLP1
B.c_group AH565Soil, beech grove (1993)Norway, MossAFLP1

2 isolate(s) sharing typing data in supercluster 261

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StrainSourceLocationShared Typing Data
B.c_group AH553Soil, cabbage field (1993)Norway, MossAFLP1
B.c_group AH549Soil, cabbage field (1993)Norway, MossAFLP1

3 isolate(s) sharing typing data in supercluster 262

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StrainSourceLocationShared Typing Data
B.c_group AH621Soil, heather soil (1994)Norway, Singsaas/SaeterengAFLP1 MLST(TH, H)
B.c_group AH407DairyFinland, ValioMLST(TH, H)
B.c_group AH694Soil, heather soil (1994)Norway, TromsoeAFLP1

4 isolate(s) sharing typing data in supercluster 263

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StrainSourceLocationShared Typing Data
B.cereus AFS009162Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS097384Soil (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS076352Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS088431Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)

2 isolate(s) sharing typing data in supercluster 264

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StrainSourceLocationShared Typing Data
B.cereus S6617Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus Rock3-42SoilUSA, Maryland, RockvilleMLST(P)

2 isolate(s) sharing typing data in supercluster 265

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StrainSourceLocationShared Typing Data
B.c_group AH682Soil, heather soil (1994)Norway, TromsoeAFLP1
B.c_group AH693Soil, heather soil (1994)Norway, TromsoeAFLP1

4 isolate(s) sharing typing data in supercluster 266

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StrainSourceLocationShared Typing Data
B.cereus AFS079629(2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS028664Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.c_group BAG3O-1SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.cereus AFS042904Plant, Wheat plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)

2 isolate(s) sharing typing data in supercluster 267

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StrainSourceLocationShared Typing Data
B.c_group AY4-1Soil (2012)KazakhstanMLST(P)
B.c_group AY8-1Soil (2012)KazakhstanMLST(P)

3 isolate(s) sharing typing data in supercluster 268

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StrainSourceLocationShared Typing Data
B.cereus RIVMBC485(2001) MLST(P, adk, ccpa, clpc, ftsa, muts, pyca1, pyre, rpob, succ, yhfl)
B.cereus AFS035470Soil (2014)USA, New YorkMLST(P, adk, ccpa, clpc, ftsa, muts, pyca1, pyre, rpob, succ, yhfl)
B.thuringiensis PLJAS92/2Soil (2012)PolandMLST(P)

2 isolate(s) sharing typing data in supercluster 269

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StrainSourceLocationShared Typing Data
B.cereus 46R1-ASoil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. hereward grown in a plot in which the previous crop was wheat (Triticum aestivum) var. cadenza]UK, England, RothamstedMLST(P)
B.cereus 46R1Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. hereward grown in a plot in which the previous crop was wheat (Triticum aestivum) var. cadenza]UK, England, RothamstedMLST(P)

2 isolate(s) sharing typing data in supercluster 270

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StrainSourceLocationShared Typing Data
B.thuringiensis HD275  AFLP2
B.thuringiensis HD291  AFLP2

4 isolate(s) sharing typing data in supercluster 271

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StrainSourceLocationShared Typing Data
B.cereus S6612Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6557Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6594Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6611Soil (2007)USA, Maryland, RockvilleMLST(P)

2 isolate(s) sharing typing data in supercluster 272

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StrainSourceLocationShared Typing Data
B.mycoides INRAS57Soil AFLP3
B.mycoides INRAS28Soil AFLP3

6 isolate(s) sharing typing data in supercluster 273

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StrainSourceLocationShared Typing Data
B.cereus FSLW8-0520Other, RO - Liquid (WIP) (2012)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus FSLW8-0523Other, Blended liquid whey silo (2012)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus 910BCERHumanUSA, WashingtonMLST(TH, H, K, CS, P)
B.cereus 896BCERHumanUSA, WashingtonMLST(TH, H, K, CS, P)
B.cereus 2012-6Dairy products, milk productsChinaMLST(P)
B.c_group AH891Human, bloodNorway, OsloMLST(TH)

2 isolate(s) sharing typing data in supercluster 274

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StrainSourceLocationShared Typing Data
B.thuringiensis HD974  AFLP2
B.thuringiensis HD866Animal, Insect, litter of silkworm (Bombyx mori)JapanAFLP2

2 isolate(s) sharing typing data in supercluster 275

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StrainSourceLocationShared Typing Data
B.c_group KW32[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.thuringiensis BGSC4BM1SoilSpainMLST(P)

2 isolate(s) sharing typing data in supercluster 276

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StrainSourceLocationShared Typing Data
B.cereus MOD1Bc217Other, Baby Wipes (2016)USA, MarylandMLST(K, clpc, ftsa, gdpd, glpf, gmk, panc, pta, purf, purh, tpi, yhfl)
B.cereus MOD1Bc72Food, Paprika (2015)USA, MarylandMLST(K, clpc, ftsa, gdpd, glpf, gmk, panc, pta, purf, purh, tpi, yhfl)

2 isolate(s) sharing typing data in supercluster 277

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StrainSourceLocationShared Typing Data
B.thuringiensis BGSC4P1Animal, Insect, Codling moth (Cydia pomonella) [sequences conflicting with isolate HD395]PakistanMLST(P)
B.thuringiensis IBL55Soil (1987)USA, WyomingMLST(P)

4 isolate(s) sharing typing data in supercluster 278

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StrainSourceLocationShared Typing Data
B.thuringiensis BGSC4AN1Soil (1986)ChinaAFLP2 MLST(TH, H, K, CS, P)
B.thuringiensis BGSC4AV1 MalaysiaMLST(TH, H, K, CS, P)
B.c_group KW30[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.c_group BGSC4U1#3[due to conflicting MLST data between isolates BGSC4U1#1 and BGSC4U1#2 it cannot be determined to which isolate the AFLP data correspond to]JapanAFLP2

3 isolate(s) sharing typing data in supercluster 279

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StrainSourceLocationShared Typing Data
B.cereus 35R6Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. x:19 grown in a plot in which the previous crop was wheat (Triticum aestivum) var. cadenza]UK, England, RothamstedMLST(P)
B.cereus 35R4Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. x:19 grown in a plot in which the previous crop was wheat (Triticum aestivum) var. cadenza]UK, England, RothamstedMLST(P)
B.cereus 35R3Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. x:19 grown in a plot in which the previous crop was wheat (Triticum aestivum) var. cadenza]UK, England, RothamstedMLST(P)

7 isolate(s) sharing typing data in supercluster 280

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StrainSourceLocationShared Typing Data
B.cereus NZAS02Food, pasteurized egg white (2015)New Zealand, DunedinMLST(TH, H, K, CS, P)
B.cereus NZAS03Food, unpasteurized egg white (2015)New Zealand, DunedinMLST(TH, H, K, CS, P)
B.cereus NVH0861/00(2000) [diarrheal food poisoning outbreak]NorwayMLST(TH, H, K, CS, P)
B.cereus 16-00177  MLST(TH, H, P, dinb, gdpd, gyrb, mdh, muts, purf, pyca1, rpob, yhfl)
B.cereus BC_34Dairy products, industrial dairy products (2006)Italy (Northeastern)MLST(P)
B.cereus BC_35Dairy products, industrial dairy products (2006)Italy (Northeastern)MLST(P)
B.c_group FSLH7-0344Dairy products, milk products (2005)USAMLST(P)

2 isolate(s) sharing typing data in supercluster 281

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StrainSourceLocationShared Typing Data
B.mycoides SDAA303Other, farm water AFLP3
B.mycoides SDANFMO429Dairy products, milk [from dairy silo tank] AFLP3

2 isolate(s) sharing typing data in supercluster 282

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StrainSourceLocationShared Typing Data
B.thuringiensis KBBE1Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBD8Soil, Forest soil (2000)France, VersaillesMLST(CS)

2 isolate(s) sharing typing data in supercluster 283

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StrainSourceLocationShared Typing Data
B.cereus Bc218 BrazilMLST(P)
B.cereus LFB1130Animal, InsectEgyptMLST(P)

2 isolate(s) sharing typing data in supercluster 284

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StrainSourceLocationShared Typing Data
B.c_group KW11[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.thuringiensis BGSC4AS1Food, black pepper powderBrazilMLST(P)

2 isolate(s) sharing typing data in supercluster 285

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StrainSourceLocationShared Typing Data
B.thuringiensis T09016Other, grain (1988) [sequences conflicting with isolate BGSC4L6]MexicoMLST(P)
B.thuringiensis T09043Food, rice (1994)ThailandMLST(P)

5 isolate(s) sharing typing data in supercluster 286

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StrainSourceLocationShared Typing Data
B.thuringiensis IBL3796Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3797Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3800Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3798Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3799Soil (2009)USA, MarylandMLST(P)

2 isolate(s) sharing typing data in supercluster 287

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StrainSourceLocationShared Typing Data
B.cereus LFB585Human, Urinary infection (<2001)BrazilMLST(P)
B.cereus Bc247 BrazilMLST(P)

2 isolate(s) sharing typing data in supercluster 288

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StrainSourceLocationShared Typing Data
B.cereus 2013-5Dairy products, milk productsChinaMLST(P)
B.c_group VD140SoilUK, ScotlandMLST(P)

3 isolate(s) sharing typing data in supercluster 289

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StrainSourceLocationShared Typing Data
B.cereus R-22311SHuman, vomit [emetic food poisoning, emetic toxin/cereulide producer] AFLP3
B.cereus R-22310Food, pasta salad [emetic food poisoning, emetic toxin/cereulide producer] AFLP3
B.cereus SDANFFE646Other, water AFLP3

3 isolate(s) sharing typing data in supercluster 290

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StrainSourceLocationShared Typing Data
B.c_group E2i8Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group E2s7Soil (2002)UK, England, BerkshireMLST(P)
B.c_group A4g7Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)

7 isolate(s) sharing typing data in supercluster 291

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StrainSourceLocationShared Typing Data
B.cereus RIVMBC120[diarrheal food poisoning] MLST(TH, P, dinb, ftsa, gdpd, gyrb, mdh, purf, pyca1, pyre, recf, rpob)
B.wiedmannii AFS013084Soil (2014)USA, New YorkMLST(TH, dinb, ftsa, gdpd, gyrb, ilvd, mdh, purf, pyca1, pyre, recf, rpob, tpi)
B.c_group PL42SoilPolandMLST(P)
B.c_group C3i10Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group A4o4Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group PL20Soil MLST(P)
B.c_group PL21Soil MLST(P)

2 isolate(s) sharing typing data in supercluster 292

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StrainSourceLocationShared Typing Data
B.thuringiensis LFB861Food, black pepper (1994)BrazilMLST(P)
B.thuringiensis Bt195 BrazilMLST(P)

2 isolate(s) sharing typing data in supercluster 293

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StrainSourceLocationShared Typing Data
B.cereus S6643Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6644Soil (2007)USA, Maryland, RockvilleMLST(P)

4 isolate(s) sharing typing data in supercluster 294

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StrainSourceLocationShared Typing Data
B.cereus WH2015Food, turbot (2015)China, WuhanMLST(TH, H, K, CS, P)
B.cereus D17[Food Research Institute, University of Wisconsin-Madison]USA, Wisconsin, MadisonMLST(TH, H, K, CS, P)
B.cereus 16-00175  MLST(TH, H, K, CS, P)
B.cereus F4370/75#1Food, barbecued chicken (1975) [diarrheal food poisoning outbreak; sequences conflicting with isolate BGSC6A27]Canada or UKMLST(H, glpf, gmk, pta, purh, pyca2)

2 isolate(s) sharing typing data in supercluster 295

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StrainSourceLocationShared Typing Data
B.cereus F439Human, faeces/stools (1981) [diarrheal food poisoning; case linked to that of isolate F438]USA, MichiganMLST(P)
B.cereus F438Human, faeces/stools (1981) [diarrheal food poisoning; case linked to that of isolate F439]USA, MichiganMLST(P)

2 isolate(s) sharing typing data in supercluster 296

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StrainSourceLocationShared Typing Data
B.cereus Bc245 BrazilMLST(P)
B.cereus LFB704Food, soup (1987)BrazilMLST(P)

2 isolate(s) sharing typing data in supercluster 297

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StrainSourceLocationShared Typing Data
B.wiedmannii AFS073563Plant, Corn grainbin dust (2013)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS010764Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)

3 isolate(s) sharing typing data in supercluster 298

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StrainSourceLocationShared Typing Data
B.cereus 25R6Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. x:19 grown in a plot in which the previous crop was wheat (Triticum aestivum) var. cadenza]UK, England, RothamstedMLST(P)
B.c_group T0-17.b.iSoil (2006)UKMLST(P)
B.c_group T0-24.b.iSoil (2006)UKMLST(P)

2 isolate(s) sharing typing data in supercluster 299

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StrainSourceLocationShared Typing Data
B.c_group D10-15.B.i2Soil (2006)UKMLST(P)
B.weihenstephanensis Bw174Food (2005)UK, Wales, CardiffMLST(P)

2 isolate(s) sharing typing data in supercluster 300

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StrainSourceLocationShared Typing Data
B.cereus Bc221 BrazilMLST(P)
B.cereus LFB1133Animal, InsectUSAMLST(P)

4 isolate(s) sharing typing data in supercluster 301

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StrainSourceLocationShared Typing Data
B.cereus 22R4Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. x:19 grown in a plot in which the previous crop was wheat (Triticum aestivum) var. hereward]UK, England, RothamstedMLST(P)
B.cereus 22R2Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. x:19 grown in a plot in which the previous crop was wheat (Triticum aestivum) var. hereward]UK, England, RothamstedMLST(P)
B.weihenstephanensis Bw207Food (2005)UK, Wales, CardiffMLST(P)
B.c_group D10-16.A.iSoil (2006)UKMLST(P)

2 isolate(s) sharing typing data in supercluster 302

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StrainSourceLocationShared Typing Data
B.cereus FSLH7-0926Dairy products, Pasteurized 2% milk (2005)USA, New YorkMLST(P)
B.thuringiensis PLBPN51/1Soil (2012)PolandMLST(P)

2 isolate(s) sharing typing data in supercluster 303

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StrainSourceLocationShared Typing Data
B.mycoides CIP52.59  AFLP3
B.pseudomycoides CIP105701Soil (1936)USAAFLP3

2 isolate(s) sharing typing data in supercluster 304

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StrainSourceLocationShared Typing Data
B.thuringiensis HD819  AFLP2
B.thuringiensis HD848 JapanAFLP2

2 isolate(s) sharing typing data in supercluster 305

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StrainSourceLocationShared Typing Data
B.c_group D10-10.b.iSoil (2006)UKMLST(P)
B.c_group D10-8.b.iSoil (2006)UKMLST(P)

2 isolate(s) sharing typing data in supercluster 306

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StrainSourceLocationShared Typing Data
B.thuringiensis HD537[Wild type isolate] AFLP2
B.thuringiensis HD301Animal, Insect, Almond moth (Ephestia cautella/Cadra cautella)UK, EnglandAFLP2

2 isolate(s) sharing typing data in supercluster 307

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StrainSourceLocationShared Typing Data
B.wiedmannii AFS069629Plant, Soybean core (2014)USA, IowaMLST(P)
B.thuringiensis PLJAS67/5Soil (2012)PolandMLST(P)

2 isolate(s) sharing typing data in supercluster 308

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StrainSourceLocationShared Typing Data
B.thuringiensis jopaSoil (2003)UK, ScotlandMLST(P)
B.thuringiensis T08003(1964)CanadaMLST(P)

2 isolate(s) sharing typing data in supercluster 309

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StrainSourceLocationShared Typing Data
B.cereus S6610Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6600Soil (2007)USA, Maryland, RockvilleMLST(P)

2 isolate(s) sharing typing data in supercluster 310

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StrainSourceLocationShared Typing Data
B.mycoides BGSC6A19SoilJapan, ChibaMLST(P)
B.c_group KW21[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)

2 isolate(s) sharing typing data in supercluster 311

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StrainSourceLocationShared Typing Data
B.c_group AH543Soil, cabbage field (1993)Norway, MossAFLP1
B.c_group AH544Soil, cabbage field (1993)Norway, MossAFLP1

2 isolate(s) sharing typing data in supercluster 312

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StrainSourceLocationShared Typing Data
B.c_group AH569Soil, beech grove (1993)Norway, MossAFLP1
B.c_group AH570Soil, beech grove (1993)Norway, MossAFLP1

3 isolate(s) sharing typing data in supercluster 313

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StrainSourceLocationShared Typing Data
B.c_group AH552Soil, cabbage field (1993)Norway, MossAFLP1 AFLP2
B.c_group AH554Soil, cabbage field (1993)Norway, MossAFLP1
B.c_group AH633Soil, heather soil (1994)Norway, Singsaas/SaeterengAFLP2

2 isolate(s) sharing typing data in supercluster 314

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StrainSourceLocationShared Typing Data
B.c_group KW43[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.cereus XY12-121Dairy products, milk products (2012)ChinaMLST(P)

2 isolate(s) sharing typing data in supercluster 315

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StrainSourceLocationShared Typing Data
B.cereus NC1263Food, rice (1989) [human diarrhea]IndiaMLST(P)
B.cereus PC-1Plant, leaves (2016)China, Shaanxi ProvinceMLST(P)

2 isolate(s) sharing typing data in supercluster 316

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StrainSourceLocationShared Typing Data
B.cereus ATCC10987#2Dairy products, Cheese (1930) [strain named ATCC10987 but sequences conflicting with isolate ATCC10987#1 and different origin]Pakistan, Ravi RiverMLST(TH, H, K, CS, P)
B.cereus G9241#2Animal, fish from river (2013) [carries pXO1 plasmid with anthrax virulence genes and produces a polysaccharide capsule; two complete genomes sequenced for this strain with identical MLST sequences; strain named G9241 but sequences conflicting with isolate G9241#1 and different origin]Pakistan, Ravi RiverMLST(TH, H, K, CS, P)

2 isolate(s) sharing typing data in supercluster 317

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StrainSourceLocationShared Typing Data
B.c_group AH624Soil, heather soil (1994)Norway, Singsaas/SaeterengAFLP2
B.cereus D3[Food Research Institute, University of Wisconsin-Madison]USA, Wisconsin, MadisonAFLP2

2 isolate(s) sharing typing data in supercluster 318

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StrainSourceLocationShared Typing Data
B.c_group C3o31Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group B4o9Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)

2 isolate(s) sharing typing data in supercluster 319

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StrainSourceLocationShared Typing Data
B.cereus BCT3 JapanMLST(P)
B.cereus BCT4 JapanMLST(P)

2 isolate(s) sharing typing data in supercluster 320

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StrainSourceLocationShared Typing Data
B.c_group C3o39Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis 67-S-1Plant, leaves of clover (Trifolium hybridum) (2004)UKMLST(P)

2 isolate(s) sharing typing data in supercluster 321

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StrainSourceLocationShared Typing Data
B.c_group AH691Soil, heather soil (1994)Norway, TromsoeAFLP1
B.c_group AH635Soil, heather soil (1994)Norway, Singsaas/SaeterengAFLP1

4 isolate(s) sharing typing data in supercluster 322

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StrainSourceLocationShared Typing Data
B.thuringiensis HD285Other, airborne contaminant from a plate culture of B.thuringiensis AFLP2
B.thuringiensis HD973  AFLP2
B.thuringiensis HD284  AFLP2
B.thuringiensis HD923  AFLP2

3 isolate(s) sharing typing data in supercluster 323

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StrainSourceLocationShared Typing Data
B.anthracis B06_039Soil [from a site where a dead animal was buried 2 years before]ItalyMLST(TH)
B.anthracis B04_002Animal, dead sheepSpainMLST(TH)
B.anthracis B04_022Human (1996) [anthrax]France, PoitiersMLST(TH)

2 isolate(s) sharing typing data in supercluster 324

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StrainSourceLocationShared Typing Data
B.thuringiensis Bt198 BrazilMLST(P)
B.thuringiensis LFB914Soil (1992)BrazilMLST(P)

2 isolate(s) sharing typing data in supercluster 325

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StrainSourceLocationShared Typing Data
B.toyonensis AFS073955Soil (2013)USA, North CarolinaMLST(TH, H, K, CS, P)
B.toyonensis AFS044250Soil (2013)USA, North CarolinaMLST(TH, H, K, CS, P)

3 isolate(s) sharing typing data in supercluster 326

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StrainSourceLocationShared Typing Data
B.gaemokensis KCTC13318[Yellow Sea tidal flat sediment (2011) [two complete genomes sequenced for this strain with different MLST sequences and origins; strain sequenced by Super-Bacteria Research Center, KRIBB, Daejeon, South Korea; sequences conflicting with isolate JCM15801]]Korea (South), Yellow SeaMLST(TH, H, K, P, clpc, dinb, gdpd, yhfl)
B.gaemokensis JCM15801[Yellow Sea tidal flat sediment (2011) [two complete genomes sequenced for this strain with different MLST sequences and origins; strain sequenced by The Third Institute of Oceanography, State of Oceanic Administration (SOA), Xiamen, Fujian, China; sequences conflicting with isolate KCTC 13318]] MLST(TH, H, K, P, clpc, dinb, gdpd, yhfl)
B.c_group MCCC1A00707Other, sediments (2008)Yellow SeaMLST(P)

2 isolate(s) sharing typing data in supercluster 327

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StrainSourceLocationShared Typing Data
B.c_group AH639Soil, heather soil (1994)Norway, Singsaas/SaeterengAFLP2
B.c_group AH629Soil, heather soil (1994)Norway, Singsaas/SaeterengAFLP2

2 isolate(s) sharing typing data in supercluster 328

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StrainSourceLocationShared Typing Data
B.c_group PL11Soil MLST(P)
B.c_group PL12Soil MLST(P)

2 isolate(s) sharing typing data in supercluster 329

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StrainSourceLocationShared Typing Data
B.cereus 16-00221  MLST(TH, H, K, CS, gmk, ilvd, purh)
B.cereus MOD1Bc106Other, Oxytetracycline Medicated Fish Feed (2006)USA, MarylandMLST(TH, H, K, CS, gmk, ilvd, purh)

3 isolate(s) sharing typing data in supercluster 330

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StrainSourceLocationShared Typing Data
B.cereus AFS052525Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS050720Plant, Soybean plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS020704Plant, Corn core (2014)USA, North CarolinaMLST(TH, K, CS, P, ftsa, pyre, recf)

3 isolate(s) sharing typing data in supercluster 331

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StrainSourceLocationShared Typing Data
B.cereus AFS092566Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.c_group BAG2X1-1SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.thuringiensis PLBB16/2Soil (2012)PolandMLST(P)

2 isolate(s) sharing typing data in supercluster 332

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StrainSourceLocationShared Typing Data
B.thuringiensis HD972  AFLP2
B.thuringiensis HD635  AFLP2

4 isolate(s) sharing typing data in supercluster 333

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StrainSourceLocationShared Typing Data
B.thuringiensis IBL3763Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3778Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3803Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3747Soil (2009)USA, MarylandMLST(P)

2 isolate(s) sharing typing data in supercluster 334

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StrainSourceLocationShared Typing Data
B.c_group AH620Soil, heather soil (1994)Norway, Singsaas/SaeterengAFLP1
B.c_group AH686Soil, heather soil (1994)Norway, TromsoeAFLP1

2 isolate(s) sharing typing data in supercluster 335

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StrainSourceLocationShared Typing Data
B.cereus BGSC6A10[Wild type isolate; Host for phages Bastille and TP21] MLST(P)
B.c_group KW53[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)

2 isolate(s) sharing typing data in supercluster 336

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StrainSourceLocationShared Typing Data
B.thuringiensis AH251Animal, Insect, Almond moth (Ephestia cautella/Cadra cautella)USAAFLP2
B.thuringiensis HD295  AFLP2

3 isolate(s) sharing typing data in supercluster 337

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StrainSourceLocationShared Typing Data
B.cereus BC_30Food, ready-to-eat product (2006)Italy (Northwestern)MLST(P)
B.cereus NC466Dairy products, milk products (1982)JapanMLST(P)
B.cereus 4105Food (2005)UK, England, ChelmsfordMLST(P)

2 isolate(s) sharing typing data in supercluster 338

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StrainSourceLocationShared Typing Data
B.wiedmannii AFS023732Soil (2014)USA, IowaMLST(H, clpc, dinb, gmk, gyrb, ilvd, mbl, muts, panc, pta, purf, purh, pyca1, pyca2, rpob, tpi, yhfl)
B.wiedmannii AFS054589Plant, Soybean core (2014)USA, IowaMLST(H, clpc, dinb, gmk, gyrb, ilvd, mbl, muts, panc, pta, purf, purh, pyca1, pyca2, rpob, tpi, yhfl)

2 isolate(s) sharing typing data in supercluster 339

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StrainSourceLocationShared Typing Data
B.cereus ATCC4342Dairy products, milk (1900) [sensitive to gamma phage infecting B.anthracis; three complete genomes sequenced for this strain with identical MLST sequences]USAMLST(K, adk, ccpa, dinb, ftsa, glpf, gmk, ilvd, pta, purf, purh, recf, tpi)
B.cereus FT9Other, hot springsBrazil, Goias, Caldas NovasMLST(K, adk, ccpa, dinb, ftsa, glpf, gmk, ilvd, pta, purf, purh, recf, tpi)

2 isolate(s) sharing typing data in supercluster 340

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StrainSourceLocationShared Typing Data
B.c_group T0-23.b.iSoil (2006)UKMLST(P)
B.c_group T0-7.a.iSoil (2006)UKMLST(P)

4 isolate(s) sharing typing data in supercluster 341

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StrainSourceLocationShared Typing Data
B.cereus BC_25Food, egg product (2006)Italy (Southern)MLST(P)
B.cereus BC_21Food, egg product (2006)Italy (Southern)MLST(P)
B.cereus BC_11Food, egg product (2006)Italy (Southern)MLST(P)
B.cereus BC_3Food, egg product (2006)Italy (Southern)MLST(P)

2 isolate(s) sharing typing data in supercluster 342

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StrainSourceLocationShared Typing Data
B.thuringiensis IBL66Soil (1987)USA, IllinoisMLST(P)
B.thuringiensis BGSC4K9  MLST(P)

2 isolate(s) sharing typing data in supercluster 343

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StrainSourceLocationShared Typing Data
B.cereus Bc211 BrazilMLST(P)
B.cereus LFB1123Animal, InsectMadagascarMLST(P)

2 isolate(s) sharing typing data in supercluster 344

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StrainSourceLocationShared Typing Data
B.thuringiensis KBBE6Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBE8Soil, Forest soil (2000)France, VersaillesMLST(CS)

2 isolate(s) sharing typing data in supercluster 345

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StrainSourceLocationShared Typing Data
B.thuringiensis LFB476Soil (1998)BrazilMLST(P)
B.thuringiensis Bt206 BrazilMLST(P)

2 isolate(s) sharing typing data in supercluster 346

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StrainSourceLocationShared Typing Data
B.c_group K14_789(2014)Korea (South)MLST(P)
B.cereus B4088Food (2013)NetherlandsMLST(P)

2 isolate(s) sharing typing data in supercluster 347

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StrainSourceLocationShared Typing Data
B.thuringiensis PLmBB34Soil (2012)PolandMLST(P)
B.weihenstephanensis FSLW7-1108Dairy products, raw milk (2010)USAMLST(P)

2 isolate(s) sharing typing data in supercluster 348

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StrainSourceLocationShared Typing Data
B.thuringiensis HD963  AFLP2
B.thuringiensis HD33  AFLP2

2 isolate(s) sharing typing data in supercluster 349

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StrainSourceLocationShared Typing Data
B.cereus KBCH4Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.cereus KBCC4Soil, Forest soil (2000)France, VersaillesMLST(CS)

2 isolate(s) sharing typing data in supercluster 350

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StrainSourceLocationShared Typing Data
B.cereus 1R5Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. hereward grown in a plot in which the previous crop was wheat (Triticum aestivum) var. hereward]UK, England, RothamstedMLST(P)
B.cereus 1R6Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. hereward grown in a plot in which the previous crop was wheat (Triticum aestivum) var. hereward]UK, England, RothamstedMLST(P)

2 isolate(s) sharing typing data in supercluster 351

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StrainSourceLocationShared Typing Data
B.thuringiensis HD584  AFLP2
B.thuringiensis HD586  AFLP2

2 isolate(s) sharing typing data in supercluster 352

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StrainSourceLocationShared Typing Data
B.c_group BC00081Dairy products, milk products (2017)Italy, ApuliaMLST(P)
B.cereus B4147Food, cereals, cereal products, (fermented) breads, pasta and pastries (2012)NetherlandsMLST(P)

2 isolate(s) sharing typing data in supercluster 353

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StrainSourceLocationShared Typing Data
B.cereus 16-00195  MLST(P)
B.cereus HB12BC215Food packaging (2012)China, Hebei ProvinceMLST(P)

3 isolate(s) sharing typing data in supercluster 354

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StrainSourceLocationShared Typing Data
B.thuringiensis HD977Animal, Insect, Oriental Leafworm Moth/Cluster caterpillar/Cotton leafworm/Tobacco cutworm/Tobacco caterpillar/Tropical armyworm (Spodoptera litura/Prodenia litura)ChinaAFLP2 MLST(P)
B.c_group KW9[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.thuringiensis HD976  AFLP2

2 isolate(s) sharing typing data in supercluster 355

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StrainSourceLocationShared Typing Data
B.mycoides DSM384Plant, onion roots AFLP3
B.mycoides INRAZI3-4Soil AFLP3

3 isolate(s) sharing typing data in supercluster 356

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StrainSourceLocationShared Typing Data
B.thuringiensis h16  MLST(TH, H, K, CS, P)
B.thuringiensis BGSC4V1Animal, Insect, silkworm (Bombyx mori) (1981)JapanMLST(TH, H, K, CS, P)
B.c_group KW39[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)

2 isolate(s) sharing typing data in supercluster 357

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StrainSourceLocationShared Typing Data
B.cereus 2002734433Human, blood (2004)USA, CaliforniaMLST(P)
B.cereus 04S_00334Human, blood (2004)USA, CaliforniaMLST(P)

2 isolate(s) sharing typing data in supercluster 358

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StrainSourceLocationShared Typing Data
B.cereus 905Soil or plant [wheat (Triticum) rhizosphere (1985)]China, BeijingMLST(P)
B.c_group 34Food (2014)China, BeijingMLST(P)

2 isolate(s) sharing typing data in supercluster 359

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StrainSourceLocationShared Typing Data
B.cereus 24R1Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. x:19 grown in a plot in which the previous crop was wheat (Triticum aestivum) var. cadenza]UK, England, RothamstedMLST(P)
B.c_group D10-16.B.iSoil (2006)UKMLST(P)

2 isolate(s) sharing typing data in supercluster 360

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StrainSourceLocationShared Typing Data
B.mycoides BGSC6A20  MLST(P)
B.c_group KW45[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)

2 isolate(s) sharing typing data in supercluster 361

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StrainSourceLocationShared Typing Data
B.thuringiensis HD633  AFLP2
B.thuringiensis HD226  AFLP2

3 isolate(s) sharing typing data in supercluster 362

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StrainSourceLocationShared Typing Data
B.thuringiensis IBL3676Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3678Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3677Soil (2009)USA, MarylandMLST(P)

2 isolate(s) sharing typing data in supercluster 363

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StrainSourceLocationShared Typing Data
B.weihenstephanensis AFS084669Soil (2014)USA, New YorkMLST(P)
B.thuringiensis PLJAS21/4Soil (2012)PolandMLST(P)

2 isolate(s) sharing typing data in supercluster 364

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StrainSourceLocationShared Typing Data
B.cereus AFS053592Plant, core (2014)USA, North CarolinaMLST(K, P, adk, clpc, dinb, ftsa, gdpd, panc, purf, pyre, succ)
B.cereus AFS024089Plant, core (2014)USA, North CarolinaMLST(K, P, adk, clpc, dinb, ftsa, gdpd, panc, purf, pyre, succ)

2 isolate(s) sharing typing data in supercluster 365

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StrainSourceLocationShared Typing Data
B.thuringiensis HD4Animal, Insect, silkworm (Bombyx mori)FranceAFLP2
B.thuringiensis HD44  AFLP2

2 isolate(s) sharing typing data in supercluster 366

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StrainSourceLocationShared Typing Data
B.c_group AH573Soil, beech grove (1993)Norway, MossAFLP1
B.c_group AH584Soil, beech grove (1993)Norway, MossAFLP1

2 isolate(s) sharing typing data in supercluster 367

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StrainSourceLocationShared Typing Data
B.weihenstephanensis WSBC10001Dairy products, pasteurized milkGermanyAFLP3
B.weihenstephanensis WSBC10415Dairy products, pasteurized milk AFLP3

2 isolate(s) sharing typing data in supercluster 368

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StrainSourceLocationShared Typing Data
B.thuringiensis LFB860Food, black pepper (1994)BrazilMLST(P)
B.thuringiensis Bt193 BrazilMLST(P)

2 isolate(s) sharing typing data in supercluster 369

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StrainSourceLocationShared Typing Data
B.mycoides NRRLBD-3  AFLP3
B.mycoides SDAA28Other, manure AFLP3

2 isolate(s) sharing typing data in supercluster 370

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StrainSourceLocationShared Typing Data
B.thuringiensis HD281  AFLP2
B.thuringiensis HD260  AFLP2

2 isolate(s) sharing typing data in supercluster 371

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StrainSourceLocationShared Typing Data
B.cereus Bc235 BrazilMLST(P)
B.cereus LFB693Food, ice cream (1987)BrazilMLST(P)

5 isolate(s) sharing typing data in supercluster 372

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StrainSourceLocationShared Typing Data
B.c_group AH540Soil, strawberry field (1993)Norway, MossAFLP1 AFLP2
B.c_group AH574Soil, beech grove (1993)Norway, MossAFLP1
B.cereus D23[Food Research Institute, University of Wisconsin-Madison]USA, Wisconsin, MadisonAFLP2
B.c_group AH537Soil, strawberry field (1993)Norway, MossAFLP1
B.c_group AH513Soil, leaf and grass compost (1993)Norway, MossAFLP1

3 isolate(s) sharing typing data in supercluster 373

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StrainSourceLocationShared Typing Data
B.c_group B4s8Soil (2002)UK, England, BerkshireMLST(P)
B.c_group B4o12Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group B4o13Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)

4 isolate(s) sharing typing data in supercluster 374

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StrainSourceLocationShared Typing Data
B.anthracis AFS044195Plant, tree leaf (2013)USA, North CarolinaMLST(TH, H, K, CS, P)
B.anthracis AFS003761Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.anthracis AFS027725Plant, core (2014)USA, North CarolinaMLST(H, K, CS, gmk, ilvd, pta, purh, pyca2, tpi)
B.anthracis AFS096050Plant, Corn (2014)USA, North CarolinaMLST(TH, H, K, dinb, gmk, purf, purh, tpi, yhfl)

2 isolate(s) sharing typing data in supercluster 375

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StrainSourceLocationShared Typing Data
B.mycoides ATCC23258Soil (1949) MLST(P)
B.mycoides KCCM40260SoilNew GuineaMLST(P)

2 isolate(s) sharing typing data in supercluster 376

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StrainSourceLocationShared Typing Data
B.thuringiensis LFB472Animal, InsectPakistanMLST(P)
B.thuringiensis Bt173 BrazilMLST(P)

2 isolate(s) sharing typing data in supercluster 377

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StrainSourceLocationShared Typing Data
B.thuringiensis HD589  AFLP2
B.thuringiensis HD591  AFLP2

4 isolate(s) sharing typing data in supercluster 378

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StrainSourceLocationShared Typing Data
B.thuringiensis HD605  AFLP2
B.thuringiensis HD847Other, grain dust samplesUSAAFLP2
B.thuringiensis HD860  AFLP2
B.thuringiensis HD228  AFLP2

2 isolate(s) sharing typing data in supercluster 379

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StrainSourceLocationShared Typing Data
B.cereus 7/27/SHuman, faeces/stools [human diarrhea] MLST(P)
B.cereus 163907.WHuman, wound infection (2004)UK, ScotlandMLST(P)

2 isolate(s) sharing typing data in supercluster 380

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StrainSourceLocationShared Typing Data
B.thuringiensis BGSC4L6Other, grain (1988) [sequences conflicting with isolate T09016]MexicoMLST(P)
B.cereus m1576Food, poultry (1987)BrazilMLST(P)

2 isolate(s) sharing typing data in supercluster 381

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StrainSourceLocationShared Typing Data
B.cereus F2105/89(1989) [emetic toxin/cereulide producer]UKAFLP2
B.cereus F3748/75Human, faeces/stools (1975) [emetic toxin/cereulide producer isolated in association with an emetic food poisoning outbreak] AFLP2

2 isolate(s) sharing typing data in supercluster 382

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StrainSourceLocationShared Typing Data
B.mycoides LFB120  MLST(P)
B.mycoides ATCC1177[Foundation Oswaldo Cruz (FIOCRUZ), National Institute for Health Quality Control]Brazil, Rio de JaneiroMLST(P)

5 isolate(s) sharing typing data in supercluster 383

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StrainSourceLocationShared Typing Data
B.cereus RIVMBC938Food, lamb-s lettuce/Corn salad (2002) MLST(K, P, adk, clpc, ftsa, gdpd, glpt, panc, purf, pyre, succ, yhfl)
B.cereus INRAZB5-J  AFLP3 MLST(K, CS, adk, ftsa, glpf, glpt, purh, pyca2, pyre, succ, tpi)
B.cereus ADDABC45Dairy products, milk products (2017)AustriaMLST(P)
B.cereus F2038/78Human, wound (1978) [non-toxic, non-infectious isolate from transplantation wound]UKMLST(CS)
B.cereus INRAZU-JFood, raw zucchini AFLP3

6 isolate(s) sharing typing data in supercluster 384

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StrainSourceLocationShared Typing Data
B.thuringiensis BGSC4BT1#1Soil, red soil [two complete genomes sequenced for this strain with different MLST sequences; both genomes sequenced by State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, Hubei, China; sequences conflicting with isolate BGSC4BT1#2]ChinaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4BT1#2[two complete genomes sequenced for this strain with different MLST sequences; both genomes sequenced by State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, Hubei, China; sequences conflicting with isolate BGSC4BT1#1]ChinaMLST(TH, H, K, CS, P)
B.thuringiensis SCG04-02Soil (1992)ChinaMLST(TH, H, K, CS, P)
B.cereus BC04#1Human, faeces/stools (2012)IndiaMLST(H, clpc, dinb, glpf, gmk, gyrb, mdh, muts, panc, pyca1, pyca2, rpob, tpi)
B.c_group KW17[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.c_group KW47[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)

4 isolate(s) sharing typing data in supercluster 385

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StrainSourceLocationShared Typing Data
B.cereus MYb212Soil, compostGermany, RoxelMLST(TH, H, K, CS, P)
B.cereus MOD1Bc88Food, Whole Black Pepper (2015)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MYb220Soil, compostGermany, RoxelMLST(TH, H, K, CS, P)
B.cereus MOD1Bc214Other, Baby Wipes (2016)USA, MarylandMLST(P, adk, ccpa, clpc, ftsa, gyrb, mdh, muts, panc, purf, pyca1, pyre, recf, rpob, succ, yhfl)

3 isolate(s) sharing typing data in supercluster 386

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StrainSourceLocationShared Typing Data
B.thuringiensis INRALM3161Soil from an island AFLP3
B.thuringiensis INRALM5268Soil from an island AFLP3
B.thuringiensis INRALM6Soil from an island AFLP3

3 isolate(s) sharing typing data in supercluster 387

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StrainSourceLocationShared Typing Data
B.c_group C3i5Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.cereus SJ1Other, chromium-contaminated wastewater of a metal electroplating factory [chromate-resistant and reducing isolate]China, GuangdongMLST(P)
B.c_group C3o1Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)

4 isolate(s) sharing typing data in supercluster 388

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StrainSourceLocationShared Typing Data
B.wiedmannii AFS081123Plant, Corn core (2014)USA, IllinoisMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.wiedmannii AFS036521Plant, Tomato plant (2014)USA, North CarolinaMLST(K, CS, ccpa, ftsa, glpt, gmk, ilvd, pta, purh, pyca2, pyre, recf, succ, tpi)
B.wiedmannii AFS023423Plant, Corn (2014)USA, IowaMLST(K, ccpa, clpc, dinb, ftsa, gmk, ilvd, panc, pta, purf, purh, pyca2, pyre, recf, succ, tpi)
B.wiedmannii AFS033387Soil (2014)USA, IowaMLST(P, adk, ccpa, clpc, dinb, ftsa, gyrb, mdh, muts, pyca1, pyre, recf, rpob, succ)

2 isolate(s) sharing typing data in supercluster 389

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StrainSourceLocationShared Typing Data
B.cereus IF69-1Food (2014) [human vomiting]China, Hubei ProvinceMLST(P)
B.cereus IF6-2Food (2014) [emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)

2 isolate(s) sharing typing data in supercluster 390

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StrainSourceLocationShared Typing Data
B.cereus S1-7[Food Research Institute, University of Wisconsin-Madison]USA, Wisconsin, MadisonAFLP2
B.thuringiensis HD1014Soil AFLP2

2 isolate(s) sharing typing data in supercluster 391

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StrainSourceLocationShared Typing Data
B.c_group E5m10Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group E5m7Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)

2 isolate(s) sharing typing data in supercluster 392

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StrainSourceLocationShared Typing Data
B.thuringiensis T36001 MalaysiaAFLP3
B.thuringiensis T14001Animal, insect AFLP3

2 isolate(s) sharing typing data in supercluster 393

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StrainSourceLocationShared Typing Data
B.thuringiensis BGSC4H4Animal, Insect, Lepidoptera larvae (1980) [sequences conflicting with isolate T05a01]PakistanMLST(P)
B.cereus PC-7Soil (2016)China, Shaanxi ProvinceMLST(P)

2 isolate(s) sharing typing data in supercluster 394

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StrainSourceLocationShared Typing Data
B.c_group AH674Soil, heather soil (1994)Norway, TromsoeAFLP1
B.c_group AH649Soil, heather soil (1994)Norway, SteigenAFLP1

2 isolate(s) sharing typing data in supercluster 395

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StrainSourceLocationShared Typing Data
B.cereus KBAC4Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.cereus KBAC8Soil, Forest soil (2000)France, VersaillesMLST(CS)

2 isolate(s) sharing typing data in supercluster 396

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StrainSourceLocationShared Typing Data
B.thuringiensis HD629  AFLP2
B.thuringiensis HD721  AFLP2

2 isolate(s) sharing typing data in supercluster 397

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StrainSourceLocationShared Typing Data
B.cereus BFDA96143Food, rice (2007)Taiwan, Taipei countyMLST(P)
B.cereus BHU2Soil, forest soil (2016)IndiaMLST(P)

2 isolate(s) sharing typing data in supercluster 398

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StrainSourceLocationShared Typing Data
B.thuringiensis T10024(1975)PakistanMLST(P)
B.cereus 2002734477Human, blood (2004) [human septicaemia]USAMLST(P)

2 isolate(s) sharing typing data in supercluster 399

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StrainSourceLocationShared Typing Data
B.cereus F3502/73Food, rice (1973) [emetic food poisoning outbreak, emetic toxin/cereulide producer which also caused diarrheal symptoms] AFLP2
B.cereus MGBC145Human, eyeUSA, OklahomaAFLP2

3 isolate(s) sharing typing data in supercluster 400

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StrainSourceLocationShared Typing Data
B.cereus AFS042343Plant, Corn grainbin dust (2013)USA, IowaMLST(K, P, adk, ccpa, clpc, ftsa, gdpd, panc, pyre, recf, succ)
B.cereus AFS079345Other, excrement (2014)USA, IowaMLST(K, adk, ccpa, clpc, ftsa, gdpd, gmk, panc, pta, pyca2, pyre, recf, succ, tpi)
B.cereus E3911Human, blood (1978)USA, TexasMLST(P)

2 isolate(s) sharing typing data in supercluster 401

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StrainSourceLocationShared Typing Data
B.cereus S6556aSoil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6556Soil (2007)USA, Maryland, RockvilleMLST(P)

2 isolate(s) sharing typing data in supercluster 402

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StrainSourceLocationShared Typing Data
B.thuringiensis BGSC4Z1(1975)ChinaMLST(P)
B.c_group KW40[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)

2 isolate(s) sharing typing data in supercluster 403

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StrainSourceLocationShared Typing Data
B.cereus KBCD4Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.cereus KBCD5Soil, Forest soil (2000)France, VersaillesMLST(CS)

2 isolate(s) sharing typing data in supercluster 404

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StrainSourceLocationShared Typing Data
B.cereus AFS070861Plant, core (2014)USA, North CarolinaMLST(TH, P, clpc, dinb, ftsa, gdpd, gyrb, mbl, mdh, muts, purf, pyca1, recf, succ)
B.cereus AFS040054Plant, core (2014)USA, North CarolinaMLST(TH, P, clpc, dinb, ftsa, gdpd, gyrb, mbl, mdh, muts, purf, pyca1, recf, succ)

2 isolate(s) sharing typing data in supercluster 405

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StrainSourceLocationShared Typing Data
B.c_group AY14-9Soil (2012)KazakhstanMLST(P)
B.c_group AY15-7Soil (2012)KazakhstanMLST(P)

2 isolate(s) sharing typing data in supercluster 406

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StrainSourceLocationShared Typing Data
B.cereus AFS085794Plant, Corn leaf (2014)USA, IllinoisMLST(TH, H, K, P, clpc, dinb, purf, yhfl)
B.cereus AFS039342Plant, Corn leaf (2014)USA, IllinoisMLST(TH, H, K, P, clpc, dinb, purf, yhfl)

2 isolate(s) sharing typing data in supercluster 407

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StrainSourceLocationShared Typing Data
B.cereus DSM336Soil, garden soilGermanyMLST(H)
B.cereus DSM318Soil, garden soilGermanyMLST(H)

2 isolate(s) sharing typing data in supercluster 408

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StrainSourceLocationShared Typing Data
B.thuringiensis Bt155 BrazilMLST(P)
B.thuringiensis LFB683SoilBrazilMLST(P)

2 isolate(s) sharing typing data in supercluster 409

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StrainSourceLocationShared Typing Data
B.c_group AH623Soil, heather soil (1994)Norway, Singsaas/SaeterengAFLP1
B.c_group AH627Soil, heather soil (1994)Norway, Singsaas/SaeterengAFLP1

2 isolate(s) sharing typing data in supercluster 410

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StrainSourceLocationShared Typing Data
B.cereus 147749.KHuman, wound infection (2004)UK, ScotlandMLST(P)
B.cereus 167181.DHuman, wound infection (2004)UK, ScotlandMLST(P)

2 isolate(s) sharing typing data in supercluster 411

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StrainSourceLocationShared Typing Data
B.c_group BC00002Dairy products, milk products (2017)Italy, ApuliaMLST(P)
B.wiedmannii AFS077478Plant, Soybean leaf (2014)USA, MinnesotaMLST(P)

2 isolate(s) sharing typing data in supercluster 412

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StrainSourceLocationShared Typing Data
B.cereus AFS005901Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, ilvd, purh, tpi)
B.cereus AFS056099Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, ilvd, purh, tpi)

2 isolate(s) sharing typing data in supercluster 413

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StrainSourceLocationShared Typing Data
B.wiedmannii AFS004017Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.wiedmannii AFS049329Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)

2 isolate(s) sharing typing data in supercluster 414

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StrainSourceLocationShared Typing Data
B.toyonensis TYU3Plant, Japanese yew (Taxus cuspidata) (2015)Korea (South)MLST(TH, H, K, CS, P)
B.toyonensis TYU4Plant, Japanese yew (Taxus cuspidata) (2015)Korea (South)MLST(TH, H, K, CS, P)

2 isolate(s) sharing typing data in supercluster 415

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StrainSourceLocationShared Typing Data
B.thuringiensis HD235  AFLP2
B.thuringiensis HD158  AFLP2

2 isolate(s) sharing typing data in supercluster 416

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StrainSourceLocationShared Typing Data
B.cereus AX BrazilMLST(P)
B.cereus LFB1181Animal, Bird [from an outbreak of fatal septicaemia in captive birds]BrazilMLST(P)

3 isolate(s) sharing typing data in supercluster 417

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StrainSourceLocationShared Typing Data
B.cereus 005-810-6Human, blood (2003) [human pyrexia]JapanMLST(P)
B.cereus BGSC6A91Human, wound infection (2004) [sequences conflicting with isolate 142521.S]UK, ScotlandMLST(P)
B.cereus 144993.AHuman, wound infection (2004)UK, ScotlandMLST(P)

2 isolate(s) sharing typing data in supercluster 418

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StrainSourceLocationShared Typing Data
B.thuringiensis HD43  AFLP2
B.thuringiensis ATCC10792#4Animal, Insect, Mediterranean flour moth/mill moth (Ephestia kuhniella/Anagasta kuehniella) [due to conflicting MLST data between isolates ATCC10792#1, ATCC10792#2, and ATCC10792#3 it cannot be determined to which isolate the AFLP and MLEE data correspond to]IsraelAFLP2

3 isolate(s) sharing typing data in supercluster 419

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StrainSourceLocationShared Typing Data
B.thuringiensis 261-1Soil (2003)China, Hebei, BaodingMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4BH1Food, rice paddyThailandMLST(TH, H, K, CS, P)
B.c_group KW31[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)

2 isolate(s) sharing typing data in supercluster 420

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StrainSourceLocationShared Typing Data
B.thuringiensis Bt202 BrazilMLST(P)
B.thuringiensis LFB584Animal, InsectIsraelMLST(P)

2 isolate(s) sharing typing data in supercluster 421

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StrainSourceLocationShared Typing Data
B.thuringiensis PLBPN13/1Soil (2012)PolandMLST(P)
B.thuringiensis PLJAS84/4Soil (2012)PolandMLST(P)

3 isolate(s) sharing typing data in supercluster 422

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StrainSourceLocationShared Typing Data
B.thuringiensis YGd22-03Soil (1992)ChinaMLST(TH, H, K, CS, P)
B.thuringiensis IPPBIOTSUC1012Soil, forest park (2011)China, BeijingMLST(TH, H, K, CS, P)
B.c_group KW49[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)

2 isolate(s) sharing typing data in supercluster 423

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StrainSourceLocationShared Typing Data
B.c_group AH688Soil, heather soil (1994)Norway, TromsoeAFLP1
B.c_group AH689Soil, heather soil (1994)Norway, TromsoeAFLP1

3 isolate(s) sharing typing data in supercluster 424

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StrainSourceLocationShared Typing Data
B.thuringiensis PLBB01/2Soil (2012)PolandMLST(P)
B.cereus AFS087218Soil (2014)USA, North CarolinaMLST(P)
B.thuringiensis PLBB34/5Soil (2012)PolandMLST(P)

2 isolate(s) sharing typing data in supercluster 425

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StrainSourceLocationShared Typing Data
B.thuringiensis HD169  AFLP2
B.thuringiensis HD203Animal, Insect, diseased Tobacco Budworm (Heliothis virescens) AFLP2

2 isolate(s) sharing typing data in supercluster 426

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StrainSourceLocationShared Typing Data
B.thuringiensis HD34  AFLP2
B.thuringiensis HD7Animal, Insect, Siberian moth (Dendrolimus sibiricus)FranceAFLP2

2 isolate(s) sharing typing data in supercluster 427

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StrainSourceLocationShared Typing Data
B.cereus NC422Human, faeces/stools (1982)JapanMLST(P)
B.thuringiensis c25Soil (2017)Korea (South)MLST(P)

2 isolate(s) sharing typing data in supercluster 428

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StrainSourceLocationShared Typing Data
B.thuringiensis Et10/1Other, Water (2011) [altitude 3997 m.]Chile, Lirima thermal springsMLST(TH, H, K, CS, P)
B.thuringiensis Lr3/2Other, Water (2011) [altitude 3997 m.]Chile, Lirima thermal springsMLST(TH, H, K, CS, P)

2 isolate(s) sharing typing data in supercluster 429

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StrainSourceLocationShared Typing Data
B.wiedmannii AFS080080Plant, Corn core (2014)USA, IllinoisMLST(TH, H, gmk, gyrb, mdh, purh, tpi)
B.wiedmannii AFS052302Plant, Soybean core (2014)USA, IowaMLST(TH, H, gmk, gyrb, mdh, purh, tpi)

2 isolate(s) sharing typing data in supercluster 430

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StrainSourceLocationShared Typing Data
B.cereus C1783Human, faeces/stools (1972) [diarrheal food poisoning; from the same incident as isolates C1784 and C1785]USA, FloridaMLST(P)
B.cereus C1785Food, soup (1972) [diarrheal food poisoning; from the same incident as isolates C1783 and C1784]USA, FloridaMLST(P)

3 isolate(s) sharing typing data in supercluster 431

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StrainSourceLocationShared Typing Data
B.cereus AFS065816Plant, Weed leaf (2014)USA, IndianaMLST(TH, H, K, CS, P)
B.cereus AFS006766Plant, Weed leaf (2014)USA, IndianaMLST(TH, H, K, CS, P)
B.cereus AFS029810Plant, Soybean root (2014)USA, MinnesotaMLST(TH, P, clpc, ftsa, gyrb, muts, purf, pyca1, pyre, recf, rpob, yhfl)

2 isolate(s) sharing typing data in supercluster 432

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StrainSourceLocationShared Typing Data
B.c_group AH653Soil, heather soil (1994)Norway, SteigenAFLP1
B.c_group AH679Soil, heather soil (1994)Norway, TromsoeAFLP1

2 isolate(s) sharing typing data in supercluster 433

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StrainSourceLocationShared Typing Data
B.c_group KW8[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.thuringiensis BGSC4AH1(1994)Korea (South)MLST(P)

3 isolate(s) sharing typing data in supercluster 434

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StrainSourceLocationShared Typing Data
B.thuringiensis HD1011(1915)IndiaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4BA1Soil [two complete genomes sequenced for this strain with identical MLST sequences]IndiaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4AB1  MLST(TH, P)

2 isolate(s) sharing typing data in supercluster 435

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StrainSourceLocationShared Typing Data
B.c_group MCCC1A01412Other, sediments (2006)South China SeaMLST(P)
B.anthracis L19Other, Sediment (2006)China, South China SeaMLST(P)

2 isolate(s) sharing typing data in supercluster 436

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StrainSourceLocationShared Typing Data
B.c_group AH586Soil, beech grove (1993)Norway, MossAFLP1
B.c_group AH589Soil, beech grove (1993)Norway, MossAFLP1

4 isolate(s) sharing typing data in supercluster 437

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StrainSourceLocationShared Typing Data
B.cereus AFS041803Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS000724Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS055486Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS003117Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)

2 isolate(s) sharing typing data in supercluster 438

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StrainSourceLocationShared Typing Data
B.cereus B06_013Human, bloodFranceMLST(TH)
B.cereus B06_014HumanFranceMLST(TH)

2 isolate(s) sharing typing data in supercluster 439

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StrainSourceLocationShared Typing Data
B.c_group B4s6Soil (2002)UK, England, BerkshireMLST(P)
B.c_group A3g3Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)

2 isolate(s) sharing typing data in supercluster 440

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StrainSourceLocationShared Typing Data
B.cereus Bc255 BrazilMLST(P)
B.cereus LFB598Human, faeces/stoolsBrazilMLST(P)

2 isolate(s) sharing typing data in supercluster 441

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StrainSourceLocationShared Typing Data
B.c_group AH647#2[due to conflicting MLST data between isolates AH647#1 and BGSC6A36 it cannot be determined to which isolate the AFLP and MLEE data correspond to] AFLP1
B.c_group AH684Soil, heather soil (1994)Norway, TromsoeAFLP1

2 isolate(s) sharing typing data in supercluster 442

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StrainSourceLocationShared Typing Data
B.c_group A3s8Soil (2002)UK, England, BerkshireMLST(P)
B.c_group E2i2Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)

2 isolate(s) sharing typing data in supercluster 443

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StrainSourceLocationShared Typing Data
B.mycoides ADDABC113Dairy products, milk products (2017)AustriaMLST(P)
B.cereus ADDABC31Dairy products, milk products (2017)AustriaMLST(P)

2 isolate(s) sharing typing data in supercluster 444

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StrainSourceLocationShared Typing Data
B.c_group AH515Soil, leaf and grass compost (1993)Norway, MossAFLP1
B.c_group AH528Soil, strawberry field (1993)Norway, MossAFLP1

2 isolate(s) sharing typing data in supercluster 445

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StrainSourceLocationShared Typing Data
B.thuringiensis 1710-S-2Plant, leaves of clover (Trifolium hybridum) (2004)UKMLST(P)
B.thuringiensis 286-S-1Plant, leaves of clover (Trifolium hybridum) (2004)UKMLST(P)

2 isolate(s) sharing typing data in supercluster 446

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StrainSourceLocationShared Typing Data
B.thuringiensis T68001 ThailandMLST(CS, adk, ccpa, glpt, gmk, gyrb, ilvd, mbl, mdh, muts, pta, purh, pyre, recf, rpob, succ, tpi)
B.c_group VD102SoilGuadeloupeMLST(CS, adk, ccpa, glpt, gmk, gyrb, ilvd, mbl, mdh, muts, pta, purh, pyre, recf, rpob, succ, tpi)

2 isolate(s) sharing typing data in supercluster 447

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StrainSourceLocationShared Typing Data
B.cereus Bc213 BrazilMLST(P)
B.cereus LFB1125Animal, InsectMadagascarMLST(P)

2 isolate(s) sharing typing data in supercluster 448

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StrainSourceLocationShared Typing Data
B.cereus KBCC7Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.cereus KBCD1Soil, Forest soil (2000)France, VersaillesMLST(CS)

2 isolate(s) sharing typing data in supercluster 449

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StrainSourceLocationShared Typing Data
B.cereus SJ-S6HumanUSA, Tennessee, MemphisMLST(P)
B.cereus K15-1330Human, faeces/stools (2015)Korea (South)MLST(P)

2 isolate(s) sharing typing data in supercluster 450

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StrainSourceLocationShared Typing Data
B.c_group AH659Soil, woodland soil (1994)Norway, BrekkvasselvAFLP1
B.c_group AH660Soil, woodland soil (1994)Norway, BrekkvasselvAFLP1

3 isolate(s) sharing typing data in supercluster 451

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StrainSourceLocationShared Typing Data
B.cereus CMCCP0011Soil (1984)ChinaMLST(TH, H, K, CS, P)
B.cereus CMCCP0021Soil (1979)ChinaMLST(TH, H, K, CS, P)
B.c_group KM007-1Food (2006) [human vomiting and diarrhea]China, Yunnan ProvinceMLST(P)

2 isolate(s) sharing typing data in supercluster 452

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StrainSourceLocationShared Typing Data
B.cereus A9(2014)AustraliaMLST(P)
B.cereus F3261Human, faeces/stools (1982) [human bloody diarrhea]USAMLST(P)

2 isolate(s) sharing typing data in supercluster 453

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StrainSourceLocationShared Typing Data
B.c_group AH644Soil, heather soil (1994)Norway, SteigenAFLP1
B.c_group AH619Soil, heather soil (1994)Norway, Singsaas/SaeterengAFLP1

2 isolate(s) sharing typing data in supercluster 454

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StrainSourceLocationShared Typing Data
B.cereus AFS005615Plant, leaf (2014)USA, North CarolinaMLST(K, adk, ccpa, ftsa, gdpd, glpf, gmk, ilvd, panc, purf, pyre, recf, succ, tpi)
B.cereus CZ-2Soil, paddy soilChina, NanjingMLST(K, adk, ccpa, ftsa, gdpd, glpf, gmk, ilvd, panc, purf, pyre, recf, succ, tpi)

2 isolate(s) sharing typing data in supercluster 455

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StrainSourceLocationShared Typing Data
B.c_group KW24[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.cereus BFDA96163Food, rice (2007)Taiwan, Taipei countyMLST(P)

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