Bacillus cereus group Multi-Datatype MLST+AFLP Superclusters

The isolates were combined into 455 distinct groups (superclusters), which are detailed below. The superclusters include a total of 3718 isolates.
There are also 1605 singletons, i.e., isolates that do not share a typing profile with any other isolate (i.e., isolates that have unique genotypes). They are listed here.

The superclusters contain isolates sharing identical MLST sequences and/or having identical AFLP profiles and are shown in the tables below. The list of shared MLST schemes and/or alleles is also given (if any). In a given supercluster, every isolate in the table shares the listed loci and/or AFLP profiles with at least one other strain in the group. Press the "Show Network" button to display a network showing what data are shared among which strains (if the group contains 3 isolates or more). Click on the strain name to get full information and links to MLST allele sequences and/or AFLP studies for a given isolate.
MLST schemes are abbreviated as follows: TH, Tourasse−Helgason; H, Helgason; K, Ko; P, Priest; CS, Candelon−Sorokin.
AFLP studies are abbreviated as follows: AFLP1, Ticknor; AFLP2, Hill; AFLP3, Guinebretiere.

In addition, you may press the "Show in Supertree" button to mark the isolates of a supercluster in red in the MLST+AFLP supertree using the Java Archaeopteryx tree viewer. Press the "Extract Subtree" button to display the subtree containing only the isolates of the supercluster (if the group contains 3 isolates or more). The branches of the tree will be colored according to the major phylogenetic clusters of the B. cereus group population, with the following keys:
clusterI,clusterII,clusterIII,clusterIV,clusterV,clusterVI,clusterVII,unclustered.


The trees and subtrees can be saved either in color in PhyloXML format with the associated Archaeopteryx configuration file for viewing with Archaeopteryx (you will need an utility such as "zip/unzip" on Unix/Mac or "WinZip" on Windows to open the files), or in standard (uncolored) Newick/NewHampshire format.

148 isolate(s) sharing typing data in supercluster 1

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.cereus ATCC53522Plant, roots of field-grown alfalfa/Lucerne grass (Medicago sativa) (1985)USA, Wisconsin, ArlingtonAFLP2 MLST(TH, H, K, CS, P)
B.thuringiensis AFS058113Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS075082Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS009218Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS047635Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS039999Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4AD1SoilUSSR, RussiaMLST(TH, H, K, CS, P)
B.thuringiensis AFS029963Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS016919Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS094940Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS052460Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus MLY1Other, activated sludge (2008)China, ShaoxingMLST(TH, H, K, CS, P)
B.thuringiensis AFS071454Plant, Soybean root (2014)USA, MissouriMLST(TH, H, K, CS, P)
B.thuringiensis AFS066710Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS036350Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS002920Plant, Soybean seed (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS053744Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.thuringiensis AFS048014Plant, Soybean leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS054343Plant, Corn root (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.c_group HuB1-1SoilBelgiumMLST(TH, H, K, CS, P)
B.thuringiensis AFS052778Soil (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS026252Plant, Corn (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS061455Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS031631Plant, Corn root (2013)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS048789Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS016894Soil (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS027178Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS097488Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS055854Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS045572Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS020608Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS061653Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS043555Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.c_group BAG1O-3SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.thuringiensis AFS023418Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS063894Food, Mushroom (2013)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS065707Soil (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS059242Other, excrement (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS029475Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS011673Plant, Soybean root (2013)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS076260Plant, Corn grainbin dust (2014)USA, IowaMLST(TH, H, K, CS, P)
B.c_group BAG1X1-2SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.thuringiensis AFS020128Plant, Soybean root (2013)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS095788Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS059526Plant, Corn grainbin dust (2013)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS014334Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS009644Plant, tree leaf (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS056615Plant, Soybean leaf (2014)USA, MissouriMLST(TH, H, K, CS, P)
B.thuringiensis AFS067634Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4AG1Other, grain siloFranceMLST(TH, H, K, CS, P)
B.thuringiensis AFS096978Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS055282Plant, Corn leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS043063Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS014145Plant, Soybean root (2013)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS005083Plant, leaf (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS066836Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS059931Soil (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS009253Plant, tree leaf (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS076597Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS083288Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS078332Plant, Weed plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS040286Plant, Corn seed (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS071638Plant, Soybean root (2013)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS048765Plant, Soybean root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS045516Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS059914Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS090477Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS067605Food, Mushroom (2013)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS061177Plant, Soybean leaf (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS030179Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS011084Plant, Soybean root (2014)USA, MissouriMLST(TH, H, K, CS, P)
B.thuringiensis AFS022658Plant, Soybean leaf (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS055002Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS015432Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS018179Plant, Corn grainbin dust (2013)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS024615Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS002866Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS006689Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS097856Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS026926Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS049152Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS059517Plant, Corn grainbin dust (2013)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS040001Plant, Corn root (2014)USA, IowaMLST(K, CS, P, adk, ftsa, glpt, pyre, recf, succ)
B.thuringiensis AFS092108Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, P, dinb, gdpd, purf, yhfl)
B.thuringiensis AFS071939Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, P, clpc, dinb, gdpd, purf)
B.thuringiensis AFS011939Plant, Soybean root (2014)USA, IowaMLST(H, K, P, clpc, dinb, gdpd, purf, yhfl)
B.thuringiensis AFS079576Plant, core (2014)USA, North CarolinaMLST(TH, H, CS, P, gyrb, mbl, muts, pyca1, rpob)
B.thuringiensis AFS094329Plant, core (2014)USA, North CarolinaMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.thuringiensis AFS087171Plant, core (2014)USA, North CarolinaMLST(H, K, CS, glpf, gmk, ilvd, purh, pyca2, tpi)
B.thuringiensis AFS031651Animal, Insect, beetle (2013)USA, North CarolinaMLST(TH, H, CS, P, gyrb, mbl, muts, pyca1, rpob)
B.thuringiensis AFS059559Soil (2014)USA, North CarolinaMLST(TH, H, K, P, clpc, dinb, gdpd, yhfl)
B.thuringiensis AFS065753Animal, earthworm (2013)USA, MinnesotaMLST(K, CS, P, ccpa, ftsa, glpt, pyre, recf, succ)
B.thuringiensis AFS005023(2014)USA, North CarolinaMLST(TH, H, K, P, dinb, gdpd, purf, yhfl)
B.thuringiensis AFS009835Soil (2014)USA, New YorkMLST(TH, H, K, P, clpc, dinb, purf, yhfl)
B.thuringiensis AFS045814(2014)USA, North CarolinaMLST(TH, H, CS, P, mbl, mdh, muts, pyca1, rpob)
B.thuringiensis AFS025854Plant, Soybean core (2014)USA, IowaMLST(TH, K, CS, P, ftsa, recf, succ)
B.thuringiensis AFS021667Plant, Corn core (2014)USA, IllinoisMLST(TH, H, CS, P, gyrb, mbl, mdh, pyca1, rpob)
B.thuringiensis AFS041586Plant, Grass core (2014)USA, IowaMLST(TH, H, K, P, clpc, gdpd, purf, yhfl)
B.thuringiensis AFS023506Plant, Soybean core (2014)USA, IowaMLST(TH, K, CS, P, ftsa, pyre, succ)
B.thuringiensis AFS012232Plant, Weed plant (2014)USA, IndianaMLST(TH, H, K, P, dinb, gdpd, purf)
B.thuringiensis AFS034126Plant, Corn core (2014)USA, IllinoisMLST(TH, H, CS, gmk, gyrb, ilvd, mbl, mdh, muts, purh, rpob)
B.thuringiensis AFS082639Plant, core (2014)USA, North CarolinaMLST(TH, H, K, P, dinb, gdpd, yhfl)
B.thuringiensis AFS023641Plant, core (2014)USA, North CarolinaMLST(H, K, clpc, dinb, gmk, ilvd, panc, pta, purf, purh, pyca2, tpi, yhfl)
B.thuringiensis AFS019545Plant, core (2014)USA, North CarolinaMLST(TH, H, CS, P, gyrb, mbl, pyca1, rpob)
B.thuringiensis AFS003097(2014)USA, North CarolinaMLST(TH, H, K, P, clpc, dinb, gdpd)
B.thuringiensis AFS054835Plant, Corn leaf (2014)USA, IowaMLST(TH, H, CS, gyrb, ilvd, mbl, mdh, purh, pyca1, rpob, tpi)
B.thuringiensis AFS063640Plant, Corn core (2014)USA, IllinoisMLST(TH, H, P, clpc, dinb, gyrb, mbl, mdh, purf, pyca1, rpob, yhfl)
B.thuringiensis AFS005011Plant, Weed plant (2014)USA, IndianaMLST(H, CS, glpf, gmk, gyrb, ilvd, mbl, muts, purh, pyca1, pyca2, rpob)
B.thuringiensis AFS089732Plant, Corn core (2014)USA, IllinoisMLST(TH, P, dinb, ftsa, gdpd, gyrb, mbl, mdh, purf, pyca1, recf, rpob, succ, yhfl)
B.cereus MOD1Bc83Food, Whole Black Pepper (2015)USA, MarylandMLST(TH, H, P, clpc, dinb, gyrb, mdh, muts, purf, pyca1, rpob)
B.thuringiensis B-2012Other, Sediments (2002)Pacific OceanMLST(CS, P, adk, ccpa, ftsa, gyrb, mbl, mdh, muts, pyre, recf, rpob)
B.thuringiensis AFS029767Plant, Soybean leaf (2014)USA, MinnesotaMLST(H, K, clpc, gdpd, glpf, gmk, ilvd, pta, purf, pyca2, tpi, yhfl)
B.thuringiensis AFS088507Soil (2014)USA, IowaMLST(TH, H, P, clpc, dinb, gyrb, mdh, muts, pyca1, rpob, yhfl)
B.thuringiensis AFS033597Soil (2014)USA, North CarolinaMLST(H, K, clpc, dinb, gdpd, glpf, ilvd, panc, purh, pyca2, tpi, yhfl)
B.cereus FSLK6-0043Dairy products, Laboratory Heat Treated Raw Milk (2012)USA, New YorkMLST(H, clpc, gdpd, glpf, gmk, gyrb, mbl, mdh, panc, purf, purh, pyca1, pyca2, rpob, tpi, yhfl)
B.thuringiensis Bt18247Animal, nematode (Caenorhabditis elegans) MLST(TH, P, clpc, dinb, ftsa, gyrb, mdh, muts, purf, pyca1, recf, rpob, succ)
B.thuringiensis AFS099506Plant, Corn root (2014)USA, IowaMLST(H, K, clpc, gdpd, glpf, gmk, ilvd, panc, purh, pyca2, tpi)
B.thuringiensis AFS096410Plant, Corn leaf (2014)USA, IllinoisMLST(CS, ccpa, ftsa, glpf, glpt, gyrb, ilvd, mbl, pta, purh, pyca1, pyca2, recf, rpob, succ, tpi)
B.thuringiensis AFS052034Plant, Soybean leaf (2014)USA, MinnesotaMLST(K, adk, ccpa, clpc, ftsa, gdpd, glpf, glpt, gmk, ilvd, purf, pyca2, recf, succ, tpi, yhfl)
B.thuringiensis AFS084862Plant, Corn core (2014)USA, IllinoisMLST(H, clpc, dinb, gdpd, glpf, gmk, gyrb, mbl, mdh, purh, pyca1, pyca2, rpob, tpi)
B.thuringiensis AFS056597Soil (2014)USA, North CarolinaMLST(H, dinb, glpf, gmk, gyrb, mbl, mdh, pta, purh, pyca1, pyca2, rpob, yhfl)
B.thuringiensis AFS027250Plant, Corn leaf (2014)USA, IllinoisMLST(K, adk, ccpa, clpc, dinb, ftsa, glpt, ilvd, panc, purh, pyca2, recf)
B.cereus NVH1230/88Food, oriental stew (1988) [strain responsible for a diarrheal food poisoning outbreak]NorwayAFLP2 MLST(P)
B.c_group KW26[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.c_group KW3[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.cereus SB460Human, blood, drug user (2005) [human septicemia]USA, New YorkMLST(P)
B.c_group KW1[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.c_group MCCC1A00361Other, sediments (2006)South China SeaMLST(P)
B.cereus HF54Food (2015)Germany, BerlinMLST(P)
B.cereus S6584Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus HF51Food (2015)Germany, BerlinMLST(P)
B.cereus HF10Food (2014)Germany, BerlinMLST(P)
B.cereus c1617Animal, mouse faeces/stoolsUSA, North CarolinaMLST(P)
B.cereus 2004727352Human, cutaneous lesion (2004) [human wound infection; from an outbreak of cutaneous infection in military cadets; same outbreak as isolates 2004727353 and 2004727354]USA, GeorgiaMLST(P)
B.cereus S6595Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus Bc_BY_D1-1Soil (2015)Belarus, GomelMLST(P)
B.thuringiensis FN31Other, Sediments (2002)Pacific OceanMLST(P)
B.c_group MCCC1A00841Other, sediments (2005)Pacific OceanMLST(P)
B.cereus S6569Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6590Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus LFB1687Animal, Insect, Culicidae (Mosquitoes) (2008)Brazil, Sao PauloMLST(TH)
B.c_group FSLR5-0184Dairy products, milk products (2006)USAMLST(P)
B.cereus S6636Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6624Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus 2004727354Human, cutaneous lesion (2004) [human wound infection; from an outbreak of cutaneous infection in military cadets; same outbreak as isolates 2004727352 and 2004727353]USA, GeorgiaMLST(P)
B.c_group KW7[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.thuringiensis K14_5846(2014)Korea (South)MLST(P)
B.cereus 2004727353Human, cutaneous lesion (2004) [human wound infection; from an outbreak of cutaneous infection in military cadets; same outbreak as isolates 2004727352 and 2004727354]USA, GeorgiaMLST(P)


3 isolate(s) sharing typing data in supercluster 2

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.c_group VDM034SoilSpainMLST(TH, H, P, clpc, gdpd, gyrb, mbl, mdh, purf, pyca1, rpob, yhfl)
B.c_group VDM062SoilUK, ScotlandMLST(TH, H, P, clpc, gdpd, gyrb, mbl, mdh, purf, pyca1, rpob, yhfl)
B.thuringiensis PLmBPN01Soil (2012)PolandMLST(P)


288 isolate(s) sharing typing data in supercluster 3

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.toyonensis AFS058160Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS099364Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.c_group BAG4X2-1SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.c_group HuB2-9SoilBelgiumMLST(TH, H, K, CS, P)
B.toyonensis AFS050593Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus FSLH8-0488Other, Water from hose connected to pond (2006)USA, New YorkMLST(TH, H, K, CS, P)
B.toyonensis AFS014939Plant, Grass core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS028444Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS081127Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS091569Plant, Soybean root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS019346Plant, Soybean leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS083298Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis ZBG4Soil (2014)France, ZellenbergMLST(TH, H, K, CS, P)
B.toyonensis AFS036089Plant, Soybean root (2014)USA, MissouriMLST(TH, H, K, CS, P)
B.toyonensis AFS086269Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS027862Other, excrement (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS033588Plant, Corn leaf (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS064666Plant, Weed leaf (2014)USA, OhioMLST(TH, H, K, CS, P)
B.toyonensis AFS067541Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS091045Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS089729Soil (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.toyonensis AFS084980Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.c_group HuB5-5SoilBelgiumMLST(TH, H, K, CS, P)
B.toyonensis AFS094862Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS006079Plant, Soybean root (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS027629Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS033493Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS089650Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS051123Plant, Wheat plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.toyonensis AFS067067Plant, Corn (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis BCT-7112Soil (1966) [active ingredient of the feed additive preparation Toyocerin]Japan, Shizuoka Prefecture, IzuMLST(TH, H, K, CS, P)
B.toyonensis AFS048987Plant, Weed leaf (2014)USA, OhioMLST(TH, H, K, CS, P)
B.toyonensis AFS031162Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.c_group BAG2O-2SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.toyonensis AFS080033Plant, Soybean leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS001450Plant, Corn (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS089449Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS055530Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS001368Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS028541Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS042148Plant, Corn grainbin dust (2013)USA, IowaMLST(TH, H, K, CS, P)
B.cereus FSLH8-0482Soil (2006) [soil in areas adjacent to barns]USA, New YorkMLST(TH, H, K, CS, P)
B.toyonensis AFS009314Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS045461Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS026256Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS001294Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus IP5832Other, commercial probiotic MLST(TH, H, K, CS, P)
B.c_group BAG5O-1SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.cereus 105NeOther, Water (2011)Switzerland, Neuchatel, Ponts-de-MartelMLST(TH, H, K, CS, P)
B.toyonensis AFS065389Plant, Corn root (2014)USA, IndianaMLST(TH, H, K, CS, P)
B.toyonensis AFS033477Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.toyonensis AFS072190Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS086995Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS035117Plant, Grass core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS097554Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS095380(2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS084149Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS051073Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.toyonensis AFS050801Soil (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.toyonensis AFS093065Plant, Soybean root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS097065Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus Rock4-18SoilUSA, Maryland, RockvilleMLST(TH, H, K, CS, P)
B.toyonensis AFS060522Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS023984Plant, Soybean root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS031495Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS066620Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS091268Plant, Corn root (2014)USA, OhioMLST(TH, H, K, CS, P)
B.toyonensis AFS054329Plant, Corn leaf (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS052350Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.c_group VD148SoilUK, ScotlandMLST(TH, H, K, CS, P)
B.toyonensis AFS052650Animal, Insect, Japanese beetle (2013)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS040610Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.toyonensis AFS018451Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis GOE7#1Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(TH, H, K, CS, P)
B.toyonensis AFS068057Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.c_group BAG6O-1SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.toyonensis AFS000445Plant, Weed plant (2014)USA, IndianaMLST(TH, H, K, CS, P)
B.toyonensis AFS039823Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.toyonensis AFS095804Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS027027Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis GOE5#1Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(TH, H, K, CS, P)
B.toyonensis AFS055990Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS081174Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS039264Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.c_group BAG1O-2SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.cereus NVH141/1/01(2001) [diarrheal food poisoning outbreak]NorwayMLST(TH, H, K, CS, P)
B.toyonensis AFS086630Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.toyonensis AFS072832Plant, Soybean root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS045312Soil (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.toyonensis AFS043269Plant, Corn leaf (2014)USA, OhioMLST(TH, H, K, CS, P)
B.toyonensis AFS055090Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.toyonensis AFS089607Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS097295Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS060293Other, excrement (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS049517Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS095385Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS072123Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.toyonensis AFS061705Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.c_group HuA2-3SoilBelgiumMLST(TH, H, K, CS, P)
B.toyonensis AFS023559Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.toyonensis AFS009906Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS074325Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS022121Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS096476Plant, Soybean root (2013)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS006579Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.toyonensis AFS092321Plant, tree leaf (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.toyonensis AFS081381Plant, Soybean root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS017381Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS000087Soil (2013)USA, North CarolinaMLST(TH, H, K, CS, P)
B.toyonensis AFS059543Plant, Corn (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS027674Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS067879Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS070094Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS099561Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS055514Plant, Weed plant (2014)USA, IndianaMLST(TH, H, K, CS, P)
B.toyonensis AFS041274Plant, Soybean leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS043516Plant, Weed leaf (2014)USA, IndianaMLST(TH, H, K, CS, P)
B.toyonensis AFS045990Plant, Corn (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS057443Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS098702Plant, Soybean root (2013)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS016553Plant, Weed plant (2014)USA, IndianaMLST(TH, H, K, CS, P)
B.toyonensis AFS049391Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS004252Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS036256Plant, Soybean root (2014)USA, MissouriMLST(TH, H, K, CS, P)
B.c_group VD214Other, WaterUK, ScotlandMLST(TH, H, K, CS, P)
B.toyonensis AFS024499Plant, Wheat plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.toyonensis AFS078111Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS007279Plant, Weed plant (2014)USA, IndianaMLST(TH, H, K, CS, P)
B.toyonensis AFS003709Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus Rock3-29SoilUSA, Maryland, RockvilleMLST(TH, H, K, CS, P)
B.toyonensis AFS099300Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.toyonensis AFS082630Plant, Soybean leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS051208Plant, Weed plant (2014)USA, IndianaMLST(TH, H, K, CS, P)
B.toyonensis AFS075404Plant, Soybean root (2013)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS026201Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS093377Plant, Soybean root (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis BAC3151Plant, bean (Phaseolus vulgaris) leaves (2007)Brazil, Minas Gerais, CoimbraMLST(TH, H, K, CS, P)
B.cereus Rock1-3SoilUSA, Maryland, RockvilleMLST(TH, H, K, CS, P)
B.toyonensis AFS081053Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS083176Plant, Soybean root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS020717Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS088186Plant, Soybean root (2013)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS062910Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.toyonensis AFS084242Animal, Insect, Japanese beetle (2013)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS058541Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.toyonensis AFS073024Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS027646Plant, Corn leaf (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.toyonensis AFS013932Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.toyonensis AFS016448Plant, Weed plant (2014)USA, IndianaMLST(TH, H, CS, P, gyrb, mbl, mdh, muts, rpob)
B.toyonensis AFS034981Plant, Corn core (2014)USA, IllinoisMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.toyonensis AFS017687Soil (2014)USA, IowaMLST(H, K, CS, glpf, gmk, ilvd, purh, pyca2, tpi)
B.toyonensis AFS070247Plant, Weed leaf (2014)USA, IndianaMLST(TH, K, CS, P, ftsa, recf, succ)
B.toyonensis AFS070615Plant, Weed leaf (2014)USA, IndianaMLST(TH, K, CS, P, ftsa, pyre, succ)
B.toyonensis AFS056055Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, P, clpc, dinb, purf, yhfl)
B.toyonensis AFS002053Plant, Corn (2014)USA, MinnesotaMLST(TH, H, CS, P, gyrb, mbl, muts, pyca1, rpob)
B.toyonensis AFS017221Plant, Soybean core (2014)USA, IowaMLST(H, K, P, clpc, dinb, gdpd, purf, yhfl)
B.toyonensis AFS068780Other, excrement (2014)USA, IowaMLST(TH, H, CS, P, mbl, mdh, muts, pyca1, rpob)
B.c_group HuB4-10SoilBelgiumMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.toyonensis AFS020011Plant, Grass core (2014)USA, IowaMLST(TH, H, K, CS, gmk, ilvd, purh)
B.toyonensis AFS028618Plant, Corn leaf (2014)USA, IllinoisMLST(H, K, CS, glpf, gmk, ilvd, purh, pyca2, tpi)
B.toyonensis AFS094802Plant, Soybean core (2014)USA, IowaMLST(K, CS, P, adk, ftsa, glpt, pyre, recf, succ)
B.toyonensis AFS042818(2014)USA, North CarolinaMLST(TH, H, CS, P, gyrb, mbl, mdh, muts, rpob)
B.toyonensis AFS041177Plant, Weed leaf (2014)USA, OhioMLST(TH, K, CS, P, ftsa, recf, succ)
B.toyonensis AFS014496Soil (2014)USA, North CarolinaMLST(TH, H, K, P, clpc, dinb, purf, yhfl)
B.toyonensis AFS089688Plant, Grass core (2014)USA, IowaMLST(K, CS, P, adk, ftsa, glpt, pyre, recf, succ)
B.toyonensis AFS062328Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, gmk, ilvd, purh)
B.toyonensis AFS083349Soil (2014)USA, North CarolinaMLST(TH, H, K, P, dinb, gdpd, purf, yhfl)
B.toyonensis AFS026137Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, gmk, purh, tpi)
B.toyonensis AFS027958Plant, Grass core (2014)USA, IowaMLST(TH, H, K, CS, gmk, ilvd, purh)
B.toyonensis AFS064582Plant, Soybean leaf (2014)USA, MinnesotaMLST(H, CS, glpf, gmk, gyrb, ilvd, mdh, muts, purh, pyca1, pyca2, rpob, tpi)
B.toyonensis AFS009420Plant, Soybean leaf (2014)USA, MinnesotaMLST(K, CS, P, ccpa, ftsa, pyre, recf, succ)
B.toyonensis AFS028249Plant, Soybean core (2014)USA, IowaMLST(H, P, clpc, dinb, gdpd, gyrb, mdh, muts, purf, pyca1, rpob, yhfl)
B.toyonensis AFS003846Soil (2014)USA, IowaMLST(TH, H, CS, P, gyrb, mdh, muts, rpob)
B.c_group VD131SoilMartiniqueMLST(TH, H, K, P, dinb, gdpd, purf)
B.toyonensis AFS065951Plant, Corn core (2014)USA, IllinoisMLST(TH, H, CS, P, mdh, muts, pyca1, rpob)
B.toyonensis SJ-S4HumanUSA, Tennessee, MemphisMLST(TH, P, clpc, dinb, gdpd, gyrb, mdh, muts, pyca1, pyre, recf, rpob, succ, yhfl)
B.toyonensis AFS083448Plant, Soybean leaf (2014)USA, MinnesotaMLST(H, K, clpc, dinb, gdpd, glpf, gmk, ilvd, pta, purf, purh, pyca2)
B.toyonensis AFS082731Plant, Weed plant (2014)USA, IndianaMLST(CS, adk, ccpa, ftsa, glpf, glpt, gmk, gyrb, ilvd, mbl, mdh, muts, purh, pyca2, pyre, rpob, succ)
B.toyonensis AFS090953(2014)USA, North CarolinaMLST(P, adk, ccpa, dinb, ftsa, gdpd, gyrb, mdh, muts, panc, purf, pyca1, pyre, recf, succ, yhfl)
B.toyonensis VU-DES13Animal, Springtail/Collembola (Folsomia candida) midgutNetherlands, AmsterdamMLST(TH, CS, ftsa, gyrb, ilvd, muts, purh, pyca1, pyre, succ, tpi)
B.toyonensis AFS044634Plant, Soybean root (2013)USA, MissouriMLST(H, clpc, dinb, glpf, gmk, gyrb, mbl, purf, purh, pyca1, pyca2, rpob, tpi)
B.toyonensis AFS021349Plant, Corn core (2013)USA, IllinoisMLST(K, clpc, dinb, ftsa, glpf, glpt, gmk, purf, pyca2, pyre, tpi)
B.c_group AH1247Soil (1997) [from the site of an anthrax outbreak]France, Pyrenees mountainsMLST(TH, H)
B.cereus S6607Soil (2007)USA, Maryland, RockvilleMLST(P)
B.c_group B4s1Soil (2002)UK, England, BerkshireMLST(P)
B.cereus F4794Human, blood (1982) [pneumonia]USA, MichiganMLST(P)
B.c_group B4m4Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group A3s11Soil (2002)UK, England, BerkshireMLST(P)
B.c_group AH1312Human, bloodGermany, KarlsruheMLST(TH)
B.c_group AH1311Other, probioticGermany, KarlsruheMLST(TH)
B.c_group AR10-1Soil (2012)ArgentinaMLST(P)
B.c_group C3s1Soil (2002)UK, England, BerkshireMLST(P)
B.c_group C3s10Soil (2002)UK, England, BerkshireMLST(P)
B.c_group C3m2Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.cereus S6641Soil (2007)USA, Maryland, RockvilleMLST(P)
B.c_group B4s3Soil (2002)UK, England, BerkshireMLST(P)
B.c_group AR13-1Soil (2012)ArgentinaMLST(P)
B.c_group E2s8Soil (2002)UK, England, BerkshireMLST(P)
B.cereus NC390Human, faeces/stools (1982)JapanMLST(P)
B.c_group A4s9Soil (2002)UK, England, BerkshireMLST(P)
B.cereus S6571Soil (2007)USA, Maryland, RockvilleMLST(P)
B.c_group E2o6Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group B4o11Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3s8Soil (2002)UK, England, BerkshireMLST(P)
B.c_group B4g1Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group A3s7Soil (2002)UK, England, BerkshireMLST(P)
B.cereus S6559Soil (2007)USA, Maryland, RockvilleMLST(P)
B.c_group C3o41Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.cereus B06_023Human, woundFranceMLST(TH)
B.c_group A3s6Soil (2002)UK, England, BerkshireMLST(P)
B.cereus S6635Soil (2007)USA, Maryland, RockvilleMLST(P)
B.c_group A3s9Soil (2002)UK, England, BerkshireMLST(P)
B.c_group B4g7Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3i6Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.cereus S6585Soil (2007)USA, Maryland, RockvilleMLST(P)
B.c_group C3o5Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3o40Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.cereus S6604Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus LB_063Soil (2006)USA, MarylandMLST(P)
B.c_group E5i3Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3s6Soil (2002)UK, England, BerkshireMLST(P)
B.cereus BGSC6A8Other, used in commercial probiotic BACTISUBTIL MLST(P)
B.cereus BFDA96173(2007)Taiwan, Hsinchu cityMLST(P)
B.cereus 2004721594Other, hair clippers (2004)USA, GeorgiaMLST(P)
B.c_group E2o8Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group B4g10Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group A4s2Soil (2002)UK, England, BerkshireMLST(P)
B.c_group PL9Soil MLST(P)
B.cereus S6554Soil (2007)USA, Maryland, RockvilleMLST(P)
B.c_group E2s6Soil (2002)UK, England, BerkshireMLST(P)
B.c_group C3s2Soil (2002)UK, England, BerkshireMLST(P)
B.cereus XJ12BC97Food (2012)China, Uygur RegionMLST(P)
B.c_group C3o14Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.cereus S6606Soil (2007)USA, Maryland, RockvilleMLST(P)
B.c_group E2s1Soil (2002)UK, England, BerkshireMLST(P)
B.c_group 3466-8.1Soil [non-pathogenic; Pasteur Institute]France, ParisMLST(P)
B.c_group E2o10Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group E2o1Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group E2o7Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group A4s10Soil (2002)UK, England, BerkshireMLST(P)
B.c_group B4s5Soil (2002)UK, England, BerkshireMLST(P)
B.c_group C3g3Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.cereus 2004721597Other, hair clippers (2004)USA, GeorgiaMLST(P)
B.c_group KW15[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.c_group C3o19Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3s3Soil (2002)UK, England, BerkshireMLST(P)
B.thuringiensis PLBB15/2Soil (2012)PolandMLST(P)
B.c_group E2m2Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.cereus S6586Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6613Soil (2007)USA, Maryland, RockvilleMLST(P)
B.c_group C3m4Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group AH1308Human, faeces/stoolsGermany, KarlsruheMLST(TH)
B.cereus S6609Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus B03_003Animal, cattle (cow)FranceMLST(TH)
B.cereus S6579Soil (2007)USA, Maryland, RockvilleMLST(P)
B.c_group C3s4Soil (2002)UK, England, BerkshireMLST(P)
B.c_group KW28[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.c_group PL14Soil MLST(P)
B.c_group B4s2Soil (2002)UK, England, BerkshireMLST(P)
B.c_group KW20[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.c_group B4g4Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group PEYR9Soil [non-pathogenic; Pasteur Institute]France, ParisMLST(P)
B.c_group E2s4Soil (2002)UK, England, BerkshireMLST(P)
B.cereus R_3238/03Human, blood (2003) [human septicaemia]UK, EnglandMLST(P)
B.c_group FSLM8-0214Dairy products, milk products (2012)USAMLST(P)
B.c_group C3i8Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.cereus BGSC6A7#1Other, purified from commercial probiotic BIOSUBTYL DALAT, manufactured in Vietnam [sequences conflicting with isolate BGSC6A7#2] MLST(P)
B.cereus S6581Soil (2007)USA, Maryland, RockvilleMLST(P)
B.c_group E2o2Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3i2Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group E2i6Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3g1Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.cereus B03_002Animal, cattle (cow)FranceMLST(TH)
B.c_group A4s5Soil (2002)UK, England, BerkshireMLST(P)
B.c_group E2o4Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group A3s2Soil (2002)UK, England, BerkshireMLST(P)
B.cereus 9305Human, wound (2005)UK, England, TorquayMLST(P)
B.thuringiensis SABCG7Food (2017)AustriaMLST(P)
B.c_group B4o5Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group E2i1Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3i3Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3g5Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.cereus S6632Soil (2007)USA, Maryland, RockvilleMLST(P)
B.thuringiensis PLBPN44/2Soil (2012)PolandMLST(P)
B.c_group PL10Soil MLST(P)
B.c_group E2i4Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group B4g5Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group B4g2Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)


186 isolate(s) sharing typing data in supercluster 4

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.thuringiensis HD29Animal, Insect, Siberian moth (Dendrolimus sibiricus)Czechoslovakia or USSRAFLP2 MLST(TH, H, K, CS, P)
B.thuringiensis HD11Animal, Insect, Oriental Tobacco Budworm/Cape Gooseberry Budworm (Heliothis assulta/Helicoverpa assulta)JapanAFLP2 MLST(TH, H, K, CS, P)
B.thuringiensis BGSC4J1Animal, Insect, Oriental Tobacco Budworm/Cape Gooseberry Budworm (Heliothis assulta/Helicoverpa assulta)JapanMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4L3[Wild type isolate] MLST(TH, H, K, CS, P)
B.thuringiensis AFS018409Plant, Oats (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis HD5  MLST(TH, H, K, CS, P)
B.cereus MOD1Bc21Plant, Natural Sesame Seeds (2015)USA, MarylandMLST(TH, H, K, CS, P)
B.c_group ISP2954Food MLST(TH, H, K, CS, P)
B.thuringiensis AFS061780Plant, Oats (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis HD73Animal, Insect [two complete genomes sequenced for this strain with identical MLST sequences] MLST(TH, H, K, CS, P)
B.cereus B4158Food, vegetables and (fermented) vegetable products (2012)NetherlandsMLST(TH, H, K, CS, P)
B.thuringiensis HD133Animal, Insect, Indian meal moth (Plodia interpunctella) [two complete genomes sequenced for this strain with identical MLST sequences]UK, EnglandMLST(TH, H, K, CS, P)
B.thuringiensis Btm27Animal, Insect, Citrus mealybug (Planococcus citri) (2010)EgyptMLST(TH, H, K, CS, P)
B.thuringiensis AK47Soil (2010)India, OdishaMLST(TH, H, K, CS, P)
B.thuringiensis T07153  MLST(TH, H, K, CS, P)
B.thuringiensis I13  MLST(TH, H, K, CS, P)
B.cereus AFS098022Plant, Corn grainbin dust (2013)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4AE1Animal, Insect, litter of silkworm (Bombyx mori)JapanMLST(TH, H, K, CS, P)
B.cereus RIVMBC934(2002)NetherlandsMLST(TH, H, K, CS, P)
B.thuringiensis AFS031473Plant, Oats (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis T07019  MLST(TH, H, K, CS, P)
B.thuringiensis BP865Plant, phylloplane (1993)Korea (South)MLST(TH, H, K, CS, P)
B.thuringiensis T07128  MLST(TH, H, K, CS, P)
B.thuringiensis BR37Plant, stored grains (2009)Brazil, SertanopolisMLST(TH, H, K, CS, P)
B.thuringiensis G03Soil (2003)China, Hebei, BaodingMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4J5Animal, Insect, Indian meal moth (Plodia interpunctella)UK, EnglandMLST(TH, H, K, CS, P)
B.thuringiensis AFS034084Plant, Wheat (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis 7.1oAnimal, Insect, silkworm (Bombyx mori) (2013)UKMLST(TH, H, K, CS, P)
B.cereus 6/27/SHuman, faeces/stools [human diarrhea] MLST(TH, H, K, CS, P)
B.cereus MOD1Bc231Food, food product (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus AFS045441(2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis BMB3201Soil (2015)China, Hubei ProvinceMLST(TH, H, K, CS, P)
B.thuringiensis Bc601(2012)China, TianjinMLST(TH, H, K, CS, P)
B.c_group HuB13-1SoilBelgiumMLST(TH, H, K, CS, P)
B.cereus MOD1Bc137Food, Dietary Supplements (2015)USA, MarylandMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4G1Animal, Insect, Greater Wax Moth/Honeycomb Moth (Galleria mellonella) (1958)USSRMLST(TH, H, K, CS, P)
B.thuringiensis NBIN-866SoilChina, Hubei ProvinceMLST(TH, H, K, CS, P)
B.thuringiensis 1126_1Soil (2017)China, Hebei ProvinceMLST(TH, H, K, CS, P)
B.cereus MOD1Bc30Food, Dietary Supplements (2015)USA, MarylandMLST(TH, H, K, CS, P)
B.thuringiensis T07005  MLST(TH, H, K, CS, P)
B.cereus AFS004414Plant, Oats plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis T03a001Animal, Insect, Mediterranean flour moth/mill moth (Ephestia kuhniella/Anagasta kuehniella) (1962)FranceMLST(TH, H, K, CS, P)
B.thuringiensis T07148  MLST(TH, H, K, CS, P)
B.thuringiensis T07183  MLST(TH, H, K, CS, P)
B.thuringiensis BGSC4J2Animal, Insect, Indian meal moth (Plodia interpunctella)UK, EnglandMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4T1Soil (1976)ChinaMLST(TH, H, K, CS, P)
B.thuringiensis Leapi01Animal, Insect, Loreyi Leafworm/Cosmopolitan (Mythimna loreyi/Leucania loreyi) dead larvaSpainMLST(TH, H, K, CS, P)
B.c_group BMG1.7  MLST(TH, H, K, CS, P)
B.thuringiensis T07030  MLST(TH, H, K, CS, P)
B.thuringiensis YWC2-8Soil (2007)China, Hailuo Glacier virgin forest, Sichuan basinMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4J3Animal, Insect, Indian meal moth (Plodia interpunctella) [two complete genomes sequenced for this strain with identical MLST sequences]UK, EnglandMLST(TH, H, K, CS, P)
B.thuringiensis AFS043930Plant, Oats (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4X1[Wild type isolate] MLST(TH, H, K, CS, P)
B.thuringiensis BGSC4G4Animal, Insect, Indian meal moth (Plodia interpunctella)UK, EnglandMLST(TH, H, K, CS, P)
B.thuringiensis YC-10Plant, tobacco roots (2010) [two complete genomes sequenced for this strain with identical MLST sequences]China, Hunan ProvinceMLST(TH, H, K, CS, P)
B.thuringiensis Hu4-2Other, dust sample from maize grain siloSpainMLST(TH, H, K, CS, P)
B.thuringiensis BR145Soil, soybean field (2010)Brazil, Parana, Bela Vista do ParaisoMLST(TH, H, K, CS, P)
B.cereus MOD1Bc235Food, food product (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.c_group BAG3X2-2SoilUSA, Massachusetts, BostonMLST(TH, H, K, P, clpc, gdpd, purf, yhfl)
B.thuringiensis T07033Animal, Insect, Oriental Tobacco Budworm/Cape Gooseberry Budworm (Heliothis assulta/Helicoverpa assulta) (1975)JapanAFLP2 MLST(P)
B.thuringiensis BGSC4I5 CanadaAFLP2 MLST(P)
B.thuringiensis BGSC4D14[Wild type isolate] MLST(P)
B.thuringiensis T07180Animal, Insect, Lepidoptera (1992)SpainMLST(P)
B.thuringiensis IBL533Soil (1988)VietnamMLST(P)
B.thuringiensis T05033(1975)USAMLST(P)
B.c_group C3o27Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3o37Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis BGSC4G2 USAMLST(P)
B.thuringiensis BGSC4G3[Wild type isolate] MLST(P)
B.c_group 6_2_YPlant, leaves (2005)UK, England, DorsetMLST(P)
B.thuringiensis BGSC4E7(1991) [sequences conflicting with isolate T04236]IndonesiaMLST(P)
B.c_group C3o10Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis T03a287(1988)KenyaMLST(P)
B.thuringiensis T03a361(1990)AustraliaMLST(P)
B.c_group C3o11Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis IBL966Soil (1984)NepalMLST(P)
B.c_group C3o24Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis IBL661Soil (1988)USA, PennsylvaniaMLST(P)
B.c_group C3o15Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group PL52SoilPolandMLST(P)
B.thuringiensis HD136#2Animal, Insect, rice moth (Corcyra cephalonica) [sequences conflicting with isolate HD136#1]UK, EnglandMLST(P)
B.c_group K14_5759(2014)Korea (South)MLST(P)
B.c_group C3o2Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group D10-18.A.iSoil (2006)UKMLST(P)
B.thuringiensis T04b060Animal, Insect, Almond moth (Ephestia cautella/Cadra cautella) (1987)IraqMLST(P)
B.thuringiensis T05114Other, Astiniae (1985)FranceMLST(P)
B.thuringiensis T03a075Animal, Insect, Small Cabbage White butterfly/Imported Cabbage Worm (Pieris rapae) (1976)IraqMLST(P)
B.thuringiensis YBT-1520  MLST(P)
B.thuringiensis BGSC4D15[Wild type isolate] MLST(P)
B.thuringiensis BGSC4XX5  MLST(P)
B.c_group C3o13Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3o20Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis BGSC4D17Animal, Insect, Cabbage Looper moth (Trichoplusia ni)USA, TexasMLST(P)
B.thuringiensis BGSC4F4[Wild type isolate] MLST(P)
B.c_group C3o25Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.cereus S58Animal, swan faeces/stoolsUSA, MarylandMLST(P)
B.cereus BFDA95191(2006)Taiwan, Taipei countyMLST(P)
B.thuringiensis ABTS351(2008)USAMLST(P)
B.cereus S57Soil, mudUSA, MarylandMLST(P)
B.c_group C3o29Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3o28Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis IBL84Soil (1987)USA, WisconsinMLST(P)
B.c_group C3o22Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.cereus BC_26Food, egg product (2006)Italy (Southern)MLST(P)
B.thuringiensis IBL441Soil (1988)ArgentinaMLST(P)
B.c_group C3o12Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis BGSC4F2Animal, Insect, Almond moth (Ephestia cautella/Cadra cautella)KenyaMLST(P)
B.thuringiensis T04b054(1986)IraqMLST(P)
B.thuringiensis IBL563Soil (1988)USA, North CarolinaMLST(P)
B.c_group C3o4Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis T03a172(1982)PakistanMLST(P)
B.c_group E5s9Soil (2002)UK, England, BerkshireMLST(P)
B.thuringiensis IBL1288Soil (1988)AzoresMLST(P)
B.thuringiensis IBL3757Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL159Soil (1987)USA, New MexicoMLST(P)
B.thuringiensis IBL10012[bears Photorhabdus/Yersinia-like toxin genes] MLST(P)
B.c_group E2o20Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3o9Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis BGSC4D5[Wild type isolate] MLST(P)
B.thuringiensis T04b012Animal, dead insect, Greater Wax Moth/Honeycomb Moth (Galleria mellonella) (1974)BulgariaMLST(P)
B.c_group C3o42Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis BGSC4D19Animal, Insect, dried fruit Beetle (Carpophilus hemipterus)UK, EnglandMLST(P)
B.thuringiensis ABTS2423(2008)USAMLST(P)
B.c_group DiPelOther, DiPel insecticide MLST(P)
B.thuringiensis 248-S-1Plant, leaves of clover (Trifolium hybridum) (2004)UKMLST(P)
B.c_group C3o35Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis IBL3782Soil (2009)USA, MarylandMLST(P)
B.cereus S59Soil, mudUSA, MarylandMLST(P)
B.c_group C3o18Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group E5g1Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3o17Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3o38Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis IBL743Animal, Insect, gut of an Aedes aeygpti mosquito larva (1984)USA, MarylandMLST(P)
B.cereus BGSC6A75(1996) [sequences conflicting with isolate NC1235]JapanMLST(P)
B.cereus B06_035HumanFranceMLST(TH)
B.c_group C3o21Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis BGSC4I2Animal, Insect, Raisin moth (Cadra figulilella)USAMLST(P)
B.thuringiensis ABTS2279(2008)USAMLST(P)
B.c_group C3o8Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis IBL1268Soil (1988)ArgentinaMLST(P)
B.thuringiensis T04b001(1962)KenyaMLST(P)
B.c_group C3o32Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis 164-S-1Plant, leaves of clover (Trifolium hybridum) (2004)UKMLST(P)
B.thuringiensis T05005(1964)USAMLST(P)
B.thuringiensis BGSC4D18Animal, Insect, Cabbage Looper moth (Trichoplusia ni)USAMLST(P)
B.thuringiensis BGSC4I1Animal, Insect, Indian meal moth (Plodia interpunctella)CanadaMLST(P)
B.thuringiensis IBL1247Soil (1987)Korea (South)MLST(P)
B.thuringiensis BGSC4D16[Wild type isolate] MLST(P)
B.c_group C3o3Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3o16Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis T04b073Soil (1993)ChileMLST(P)
B.thuringiensis IBL999Soil (1984)USA, MarylandMLST(P)
B.thuringiensis IBL389Soil (1986)USA, Washington D.C.MLST(P)
B.thuringiensis IBL3777Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL1252Soil (1987)Korea (South)MLST(P)
B.thuringiensis IBL1254Soil (1987)Korea (South)MLST(P)
B.c_group E5m5Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group C3o34Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis T07058Animal, Insect, spiny bollworm/Egyptian stemborer (Earias insulana) (1983)FranceMLST(P)
B.thuringiensis IBL88Soil (1987)USA, North DakotaMLST(P)
B.c_group C3o6Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis BGSC4G6Other, Reisolation of strain BGSC4G1 MLST(P)
B.c_group C3o36Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.thuringiensis IBL749Soil (1984)NepalMLST(P)
B.thuringiensis Dt7.1.oPlant, leaves of wild mustard (Brassica oleracea) (2005)UK, England, DorsetMLST(P)
B.cereus BGSC6A78Human, wound infection (2004) [sequences conflicting with isolate 211250.S]UK, ScotlandMLST(P)
B.thuringiensis HD185  AFLP2
B.thuringiensis HD10Animal, Insect, Indian meal moth (Plodia interpunctella)CanadaAFLP2
B.thuringiensis HD67  AFLP2
B.thuringiensis HD238  AFLP2
B.thuringiensis HD150  AFLP2
B.thuringiensis HD157  AFLP2
B.thuringiensis HD192  AFLP2
B.thuringiensis HD594  AFLP2
B.thuringiensis HD154  AFLP2
B.thuringiensis HD196  AFLP2
B.thuringiensis HD525  AFLP2
B.thuringiensis HD780  AFLP2
B.thuringiensis HD335  AFLP2
B.thuringiensis HD167  AFLP2
B.thuringiensis HD211  AFLP2
B.thuringiensis HD573  AFLP2
B.thuringiensis HD153  AFLP2
B.thuringiensis HD304  AFLP2
B.thuringiensis HD982  AFLP2
B.thuringiensis HD918  AFLP2


11 isolate(s) sharing typing data in supercluster 5

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.c_group HD1#4Animal, Insect, diseased larvae of Pink Bollworm (Pectinophora gossypiella) (1970) [due to conflicting MLST data between isolates HD1#1, HD1#2, HD1#3, and HD1#5 it cannot be determined to which isolate the AFLP and MLEE data correspond to]USAAFLP2
B.thuringiensis HD934  AFLP2
B.thuringiensis HD315Animal, Insect, Cotton bollworm/corn earworm/tomato fruitworm (Heliothis zea/Helicoverpa zea) AFLP2
B.thuringiensis HD250Other, airborne contaminant from a plate culture of B.thuringiensis AFLP2
B.thuringiensis HD926  AFLP2
B.thuringiensis HD88Animal, Insect, Cabbage Looper moth (Trichoplusia ni)USA, TexasAFLP2
B.thuringiensis HD554  AFLP2
B.thuringiensis HD922  AFLP2
B.thuringiensis HD243[Wild type isolate] AFLP2
B.thuringiensis HD338  AFLP2
B.thuringiensis HD342Soil AFLP2


3 isolate(s) sharing typing data in supercluster 6

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.cereus BC_24Food, egg product (2006)Italy (Southern)MLST(P)
B.cereus BC_1Food, egg product (2006)Italy (Southern)MLST(P)
B.thuringiensis NRRLB-23152Animal, Insect, Isoptera (2013)UKMLST(P)


235 isolate(s) sharing typing data in supercluster 7

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.cereus AFS098742Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS043533Plant, Soybean root (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.cereus AFS001542Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS080281Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS094460Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS070662Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS070860Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS071044Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS023898Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus AFS061448Soil (2013)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS006012Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS081512Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS054163Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS024693Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS002848Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS095703Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS059198Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS034246Soil (2013)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS060105Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS089527Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS057596Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS000937Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS093334Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS097327Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS025457Plant, Corn leaf (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS096642Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS075467Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS046340Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS044547Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS073631Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS056399Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS052902Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS073833Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS014598Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS069947Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS068756Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS078211Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS011531Plant, Corn plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS024629Soil (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS035044Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS042006Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS046374Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS059650Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS029513Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS029617Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS070964Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS018668Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS068289Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS038688Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS092789Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS009778Soil (2013)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS084075Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS099621Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS093186Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS015939Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS048213Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS051540Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS054833Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS044880Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4AR1SoilChinaMLST(TH, H, K, CS, P)
B.c_group BAG5X12-1SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.cereus AFS048966Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS006065Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS079244Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS070891Plant, Corn (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS068806Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS043896Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS053336Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS074793Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS071863Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS017211Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS032567Plant, Corn (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS070947Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS057690Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS025653Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS044520Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS095498Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS067935Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS074515Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS057097Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS087654Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4AT1(1986)JapanMLST(TH, H, K, CS, P)
B.cereus AFS076104Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS009411Plant, Soybean root (2014)USA, MissouriMLST(TH, H, K, CS, P)
B.cereus AFS017032Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS051634Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS090123Plant, Corn plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS038126Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS017947Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS071440Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS013685Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS088317Soil (2013)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS025349Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS099737Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS048598Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS088704Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS008265Plant, Corn (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS045152Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS045348Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS038041Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS007693Soil (2013)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS008436Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS093925Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus AFS020204Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS048015Plant, tree leaf (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS075408Soil (2013)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS084233Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS001538Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS037512Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS080604Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS003289Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS068876Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS005998Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS045869Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS035954Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS004701Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS030663Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS030742Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS076729Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS018041Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS082261Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS023730Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS029679Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS025490Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS063234Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS080164Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS021466Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS030991Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS014136Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS001977Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS072104Soil (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS065770Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS042863Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS063645Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS080756Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS043359Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS066354Soil (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS042307Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS071251Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS018489Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS030860Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS057502Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS059960Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS053259Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS013997Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS048989Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS026537Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS002094Plant, Corn plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS009035Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS046747Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS039950Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS085871Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS075030Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS040986Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS062062Plant, Core Corn (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS084355Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS082683Plant, Soybean leaf (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus AFS013880Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS087824Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS095018Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.c_group BAG4X12-1SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.cereus AFS007743Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS010831Soil (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS000524Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS015717Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS076401Soil (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS038754Soil (2013)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS045887(2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS095548Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS093397Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS083123Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS081367Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS087793Plant, Weed plant (2014)USA, North CarolinaMLST(H, K, CS, glpf, gmk, ilvd, purh, pyca2, tpi)
B.cereus AFS081469Plant, Corn core (2014)USA, IllinoisMLST(H, K, CS, glpf, gmk, ilvd, purh, pyca2, tpi)
B.cereus AFS032444Plant, Corn core (2014)USA, North CarolinaMLST(H, K, CS, glpf, gmk, ilvd, pta, purh, tpi)
B.cereus AFS022169Plant, Corn core (2014)USA, North CarolinaMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.cereus AFS023720Soil (2013)USA, North CarolinaMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.cereus AFS017068Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.cereus AFS044532Plant, Corn root (2014)USA, IowaMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.cereus AFS028424Plant, Corn core (2014)USA, North CarolinaMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.cereus AFS071107Plant, Soybean root (2014)USA, IowaMLST(H, K, CS, glpf, gmk, ilvd, pta, purh, tpi)
B.cereus AFS001900Plant, Corn plant (2014)USA, North CarolinaMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.cereus AFS011058Plant, Corn plant (2014)USA, North CarolinaMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.cereus AFS037926Plant, Soybean core (2014)USA, IowaMLST(H, K, CS, glpf, gmk, ilvd, pta, purh, tpi)
B.cereus AFS088052Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, P, dinb, gdpd, purf, yhfl)
B.cereus AFS039692Soil (2013)USA, North CarolinaMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.cereus AFS089031Plant, Weed core (2014)USA, North CarolinaMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.cereus AFS036381Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, P, clpc, dinb, gdpd, purf)
B.cereus AFS043413Soil (2014)USA, New YorkMLST(TH, H, K, P, clpc, gdpd, purf, yhfl)
B.cereus AFS055648Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, P, clpc, dinb, gdpd, yhfl)
B.cereus AFS097377Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, gmk, ilvd, tpi)
B.cereus AFS086528Plant, core (2014)USA, North CarolinaMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.cereus AFS040106Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.cereus AFS073305Plant, Corn core (2014)USA, North CarolinaMLST(K, CS, P, adk, ftsa, glpt, pyre, recf, succ)
B.cereus AFS025120Plant, Soybean core (2014)USA, IowaMLST(TH, H, CS, P, gyrb, mbl, mdh, pyca1, rpob)
B.cereus SJ-S3HumanUSA, Tennessee, MemphisMLST(TH, K, CS, P, ftsa, pyre, recf)
B.cereus AFS052400Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, P, dinb, gdpd, purf, yhfl)
B.cereus AFS047280Plant, Corn core (2014)USA, North CarolinaMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.cereus AFS085674Plant, Corn core (2014)USA, North CarolinaMLST(TH, K, CS, P, ftsa, pyre, succ)
B.cereus AFS008413Soil (2014)USA, New YorkMLST(TH, H, K, CS, gmk, ilvd, tpi)
B.cereus AFS009093Plant, Corn core (2014)USA, North CarolinaMLST(H, K, CS, glpf, gmk, ilvd, purh, pyca2, tpi)
B.cereus AFS043837Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, P, dinb, gdpd, purf, yhfl)
B.cereus AFS097130Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, P, clpc, dinb, gdpd, yhfl)
B.cereus AFS029052Plant, Weed core (2014)USA, North CarolinaMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.cereus AFS016599Plant, Corn (2014)USA, North CarolinaMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.cereus AFS054178Plant, Corn core (2014)USA, North CarolinaMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf)
B.cereus Rock4-2SoilUSA, Maryland, RockvilleMLST(TH, CS, P, ftsa, mbl, mdh, muts, pyca1, pyre, rpob, succ)
B.cereus AFS011950Plant, Corn core (2014)USA, North CarolinaMLST(H, CS, glpf, gmk, gyrb, ilvd, mdh, muts, pta, purh, pyca1, rpob, tpi)
B.cereus AFS041497Plant, core (2014)USA, North CarolinaMLST(TH, K, CS, ftsa, ilvd, purh, recf, succ, tpi)
B.cereus AFS085606Soil (2014)USA, North CarolinaMLST(K, P, ccpa, clpc, ftsa, gdpd, glpt, panc, purf, pyre, recf, succ, yhfl)
B.cereus AFS056025Plant, Corn core (2014)USA, IllinoisMLST(H, K, clpc, dinb, gdpd, gmk, ilvd, panc, pta, purh, pyca2, tpi, yhfl)
B.cereus AFS028351Plant, core (2014)USA, North CarolinaMLST(CS, P, adk, ftsa, glpt, mdh, muts, pyca1, pyre, recf, rpob, succ)
B.thuringiensis BuibuiAnimal, Insect, Coleoptera (2013)UKMLST(TH, H, K, clpc, gdpd, ilvd, purf, purh, tpi)
B.thuringiensis KNU-07Plant, Ginseng (2015)Korea (South)MLST(H, K, clpc, dinb, gmk, ilvd, pta, purf, pyca2, tpi, yhfl)
B.cereus AFS088784Plant, Corn core (2014)USA, North CarolinaMLST(H, K, clpc, gdpd, gmk, panc, pta, purf, pyca2, tpi, yhfl)
B.thuringiensis BGSC4CA1 Korea (South)MLST(K, P, clpc, ftsa, glpt, panc, pyre, recf, succ, yhfl)
B.cereus AFS076596Soil (2014)USA, New YorkMLST(K, CS, ftsa, glpf, gmk, ilvd, pta, pyre, succ, tpi)
B.cereus AFS090431Plant, Oats plant (2014)USA, North CarolinaMLST(K, CS, adk, ccpa, gmk, pyca2, pyre, recf, succ, tpi)
B.cereus AFS061148Plant, Weed core (2014)USA, North CarolinaMLST(P, ccpa, gdpd, muts, purf, pyca1, pyre, recf, rpob, succ, yhfl)
B.cereus AFS010272Plant, Corn core (2014)USA, IllinoisMLST(H, clpc, dinb, glpf, gmk, mbl, mdh, purf, pyca1, rpob, tpi)
B.thuringiensis ST7  MLST(K, P, ftsa, gdpd, yhfl)
B.cereus AFS062641Plant, core (2014)USA, North CarolinaMLST(K, ccpa, dinb, ftsa, glpt, pta, purf, purh, recf, succ)
B.cereus AFS018281Plant, Corn core (2014)USA, North CarolinaMLST(K, adk, dinb, ilvd, pta, purh, recf, succ, tpi)
B.cereus AFS058833Plant, Corn core (2014)USA, North CarolinaMLST(K, ftsa, glpt, pyca2, pyre, recf, succ, tpi, yhfl)
B.cereus HB11BC185Food packaging (2011)China, Hebei ProvinceMLST(P)
B.c_group KW35[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.cereus S6625Soil (2007)USA, Maryland, RockvilleMLST(P)
B.thuringiensis BGSC4D12Animal, Insect, Almond moth (Ephestia cautella/Cadra cautella)UK, EnglandMLST(P)
B.cereus S6630Soil (2007)USA, Maryland, RockvilleMLST(P)
B.c_group KW29[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.c_group KW61[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.cereus 2004721590Soil, mud (2004)USA, GeorgiaMLST(P)
B.c_group 20166Food (2013)ChinaMLST(P)
B.cereus S6639Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus 2004721589Soil, mud (2004)USA, GeorgiaMLST(P)


120 isolate(s) sharing typing data in supercluster 8

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.cereus FSLR5-0811Dairy products, pasteurized milk (2006)USAMLST(TH, H, K, CS, P)
B.weihenstephanensis FSLR5-860Dairy products, pasteurized milk (2006)USAMLST(TH, H, K, CS, P)
B.cereus FSLM8-0473(2015)USAMLST(TH, H, K, CS, P)
B.cereus FORC024Food, chicken soupKorea (South), IncheonMLST(TH, H, K, CS, P)
B.cereus BDRD-Cer4[Biological Defense Research Directorate (BDRD)]USA, Maryland, RockvilleMLST(TH, H, K, CS, P)
B.cereus AFS012400Plant, Cucumber plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus 16-00196  MLST(TH, H, K, CS, P)
B.cereus AH725Human, eye (1995)Norway, SkienMLST(TH, H, K, CS, P)
B.cereus B4155Food (2013)NetherlandsMLST(TH, H, K, CS, P)
B.c_group VD045SoilGreenlandMLST(TH, H, K, CS, P)
B.cereus AFS053406Plant, Corn plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS011918Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus FORC021Other, KnifeKorea (South), UlsanMLST(TH, H, K, CS, P)
B.cereus 16SBCL1279Human, Breast milk (2016)France, Ile-de-France Lactarium, ParisMLST(TH, H, K, CS, P)
B.thuringiensis Pasteur_Standard[two complete genomes sequenced for this strain with identical MLST sequences] MLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.cereus BHU1Soil, Cropfield soil (2016)IndiaMLST(TH, H, K, P, clpc, dinb, gdpd, yhfl)
B.cereus 16-00198  MLST(TH, H, K, P, clpc, dinb, gdpd, yhfl)
B.cereus F4430/73Other, pea soup or faeces/stools (1973) [diarrheal food poisoning outbreak]BelgiumMLST(TH, H, K, P, clpc, dinb, gdpd, purf)
B.cereus A8S3Other, Sediments (2003)Pacific OceanMLST(TH, H, CS, P, gyrb, mbl, mdh, pyca1, rpob)
B.cereus AFS070416Plant, core (2014)USA, North CarolinaMLST(TH, H, K, P, dinb, gdpd, purf, yhfl)
B.cereus SJ-S27HumanUSA, Tennessee, MemphisMLST(TH, H, K, CS, gmk, purh, tpi)
B.cereus INRAC3Food, pasteurized carrot (1996) (1996)France, VaucluseMLST(TH, H, K, P, dinb, gdpd, purf, yhfl)
B.cereus MOD1Bc218Other, Baby Wipes (2016)USA, MarylandMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.cereus LK9(2010)Malaysia, MalaccaMLST(TH, H, CS, P, gyrb, mbl, mdh, pyca1, rpob)
B.c_group VD169SoilUAE, DubaiMLST(TH, K, CS, P, ftsa, pyre, succ)
B.cereus ATCC14579Other, Farm, cow-shed air (1916)USAAFLP1 AFLP2 MLST(TH, K, CS, ftsa, ilvd, purh, recf, succ)
B.cereus MOD1Bc92Food, Whole Black Pepper (2015)USA, MarylandMLST(TH, H, CS, P, mbl, mdh, muts, pyca1, rpob)
B.c_group VD166SoilUAE, DubaiMLST(TH, H, K, P, dinb, gdpd, yhfl)
B.cereus B4081Food (2013)NetherlandsMLST(TH, H, P, clpc, dinb, gdpd, gyrb, mbl, mdh, purf, pyca1, rpob)
B.cereus 16-00184  MLST(TH, H, P, clpc, dinb, gdpd, gyrb, mdh, muts, purf, pyca1, rpob)
B.cereus Co15Other, Sediments (2003)Pacific OceanMLST(K, P, adk, clpc, dinb, ftsa, gdpd, glpt, panc, pyre, recf, succ, yhfl)
B.cereus MOD1Bc230Food, food product (2016)USA, MarylandMLST(TH, H, P, clpc, gdpd, mbl, mdh, muts, purf, pyca1, rpob, yhfl)
B.cereus FSLK6-1030Dairy products, condensed milk (2013)USAMLST(TH, H, K, P, clpc, dinb, gdpd)
B.cereus SJ-S23HumanUSA, Tennessee, MemphisMLST(TH, K, clpc, dinb, gdpd, gmk, purf, purh, pyre, recf, succ, tpi)
B.cereus C1LSoil or plant, rhizosphere (2003)Taiwan, Taroko National Park, HualienMLST(H, K, clpc, dinb, gdpd, glpf, gmk, ilvd, purf, purh, pyca2, yhfl)
B.thuringiensis T69001 MalaysiaMLST(TH, K, P, clpc, dinb, ftsa, purf, pyre, succ)
B.cereus B4120Food (2013)NetherlandsMLST(TH, H, P, clpc, dinb, gdpd, mbl, muts, pyca1, rpob, yhfl)
B.cereus E41Other, salt lake (2016)Algeria, Ain Mlila-Oum El BouaghiMLST(H, clpc, dinb, gdpd, gmk, gyrb, ilvd, mbl, muts, panc, pta, purh, pyca1, pyca2, rpob, tpi)
B.cereus Rock1-15SoilUSA, Maryland, RockvilleMLST(K, P, adk, clpc, dinb, ftsa, gdpd, glpt, panc, recf, succ)
B.cereus MOD1Bc86Food, Whole Black Pepper (2015)USA, MarylandMLST(TH, H, clpc, dinb, gdpd, gmk, gyrb, ilvd, mdh, muts, purh, pyca1, rpob)
B.thuringiensis BGSC4BW1 SpainMLST(H, P, clpc, dinb, gdpd, gyrb, mbl, muts, pyca1, rpob)
B.cereus MOD1Bc85Food, Ground Black Pepper (2015)USA, MarylandMLST(K, adk, dinb, ftsa, gdpd, glpf, glpt, gmk, panc, purf, purh, pyca2, pyre, recf, succ, tpi)
B.cereus SJ-S9HumanUSA, Tennessee, MemphisMLST(TH, CS, ilvd, mbl, mdh, purh, recf, rpob, succ, tpi)
B.thuringiensis BGSC4H2(1968)CanadaMLST(TH, clpc, dinb, ftsa, gdpd, gyrb, ilvd, mbl, mdh, purh, pyca1, recf, rpob, succ)
B.thuringiensis BGSC4CF1 MalaysiaMLST(K, adk, clpc, dinb, glpf, glpt, gmk, ilvd, panc, pta, purh, pyca2, pyre, succ)
B.c_group VD196SoilUAE, DubaiMLST(H, dinb, gmk, gyrb, ilvd, mbl, mdh, panc, pyca1, pyca2, rpob, tpi)
B.c_group AH716Human, pusNorway, SkienMLST(TH, H)
B.c_group AH1293Human, bloodNorway, TromsoeMLST(TH, H)
B.c_group AH889Human, bloodNorwayMLST(TH, H)
B.c_group AH1294Human, bloodNorway, TromsoeMLST(TH, H)
B.c_group AH726Human, urineNorway, SkienMLST(TH, H)
B.cereus F2668/90Food, lamb (1990) [diarrheal food poisoning outbreak]NetherlandsAFLP2 MLST(P)
B.thuringiensis T09010(1979)USAMLST(P)
B.c_group K15_115(2014)Korea (South)MLST(P)
B.cereus R_2955/03Human, blood (2003) [human septicaemia]UK, EnglandMLST(P)
B.cereus BC_9Food, egg product (2006)Italy (Southern)MLST(P)
B.thuringiensis IBL695Soil (1976)HawaiiMLST(P)
B.cereus BFDA95192(2006)Taiwan, Taipei countyMLST(P)
B.thuringiensis T09024(1991)IndonesiaMLST(P)
B.cereus K15-3447Human, faeces/stools (2015)Korea (South)MLST(P)
B.cereus CBC_99006Human, diarrheaJapanMLST(P)
B.c_group BC00001Dairy products, milk products (2017)Italy, ApuliaMLST(P)
B.cereus 108229.NHuman, wound infection (2004)UK, ScotlandMLST(P)
B.cereus R_3149/03Human, blood (2003) [human septicaemia]UK, EnglandMLST(P)
B.thuringiensis T09011Animal, Insect, Lepidoptera (1987)IraqMLST(P)
B.c_group MCCC1A00418Other, sediments (2005)Pacific OceanMLST(P)
B.c_group MCCC1A00432Other, sediments (2005)Pacific OceanMLST(P)
B.cereus 000-843-51Human, blood (2004) [human pneumonia]JapanMLST(P)
B.cereus NC1225Human, faeces/stools (1996)JapanMLST(P)
B.thuringiensis BGSC4L5(1990) [sequences conflicting with isolate T09020]ItalyMLST(P)
B.c_group MCCC1A06185Other, middle seawater (2009)Pacific OceanMLST(P)
B.cereus 200593.XHuman, wound infection (2004)UK, ScotlandMLST(P)
B.c_group FSLR5-0859Dairy products, milk products (2006)USAMLST(P)
B.c_group MCCC1A00495Other, sediments (2005)Pacific OceanMLST(P)
B.cereus 149041.SHuman, wound infection (2004)UK, ScotlandMLST(P)
B.cereus Sve1Human, blood (2003)ItalyMLST(P)
B.thuringiensis T09034(1992)BrazilMLST(P)
B.cereus BC_5Food, egg product (2006)Italy (Southern)MLST(P)
B.cereus EFBC85Food (2017)AustriaMLST(P)
B.cereus S6566Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus B548  MLST(P)
B.c_group MCCC1A01400Other, sediments (2006)Indian OceanMLST(P)
B.cereus 134070.JHuman, wound infection (2004)UK, ScotlandMLST(P)
B.cereus NC499Food (1983)JapanMLST(P)
B.cereus 2003-I-1253Human, blood (2003) [human septicaemia, fatal]USA, OregonMLST(P)
B.cereus 2003-I-1254Human, blood (2003) [human, fatal]USA, OregonMLST(P)
B.cereus BFDA96117Food (2007)Taiwan, Taoyuan countyMLST(P)
B.cereus CBC_03004Human, diarrheaJapanMLST(P)
B.c_group K14_4528(2014)Korea (South)MLST(P)
B.cereus BC_32Food, ready-to-eat product (2006)Italy (Northwestern)MLST(P)
B.cereus BGSC6A42Food packaging [sequences conflicting with isolate TSP8] MLST(P)
B.cereus BC_17Food, egg product (2006)Italy (Southern)MLST(P)
B.c_group MCCC1A08490Other, sediments (2011)Arctic OceanMLST(P)
B.c_group MCCC1A01874Other, sediments (2006)Pacific OceanMLST(P)
B.cereus F6722Food (1985) [diarrheal food poisoning]USA, AlabamaMLST(P)
B.cereus F99/5941Other, environmental (1999) [food-water-environment survey isolate] MLST(P)
B.cereus LFB541Food, Rice cream (1982)BrazilMLST(TH)
B.cereus XA12-18Dairy products, milk products (2012)ChinaMLST(P)
B.c_group MCCC1A00298Other, sediments (2006)Pacific OceanMLST(P)
B.thuringiensis T09052Other, spider web (1999)CanadaMLST(P)
B.c_group MCCC1A00360Other, sediments (2006)Pacific OceanMLST(P)
B.c_group MCCC1A06183Other, bottom seawater (2009)Pacific OceanMLST(P)
B.cereus 177147.YHuman, wound infection (2005)UK, ScotlandMLST(P)
B.cereus NC1292Food, rice (1999)JapanMLST(P)
B.cereus BC_29Food, ready-to-eat product (2006)Italy (Northwestern)MLST(P)
B.thuringiensis BGSC4L2Animal, Insect, Almond moth (Ephestia cautella/Cadra cautella)UK, EnglandMLST(P)
B.c_group MCCC1A06184Other, surface seawater (2009)Pacific OceanMLST(P)
B.cereus BFDA96166Food, rice (2007)Taiwan, Taipei countyMLST(P)
B.cereus D8096Human, blood (1971)USA, LouisianaMLST(P)
B.c_group MCCC1A04083Other, surface seawater (2009)Pacific OceanMLST(P)
B.thuringiensis BGSC4L1Animal, Insect, Almond moth (Cadra cautella) [sequences conflicting with isolate HD125]UK, EnglandMLST(P)
B.c_group MCCC1A08292Other, sediments (2011)Arctic OceanMLST(P)
B.cereus G2008Human, faeces/stools (1988) [food poisoning]USA, PennsylvaniaMLST(P)
B.cereus 201183.DHuman, wound infection (2003)UK, ScotlandMLST(P)
B.cereus 653-154-7Human, blood (2003) [human pneumonia]JapanMLST(P)
B.cereus HF16Food (2014)Germany, BerlinMLST(P)
B.cereus B06_036Human, bloodTahiti, PapeeteMLST(TH)
B.thuringiensis HD489Animal, Insect, Oriental Leafworm Moth/Cluster caterpillar/Cotton leafworm/Tobacco cutworm/Tobacco caterpillar/Tropical armyworm (Spodoptera litura/Prodenia litura) on sweet potatoUSAAFLP2
B.cereus D26Food; Food Research Institute, University of Wisconsin-MadisonUSA, Wisconsin, MadisonAFLP2
B.c_group AH585Soil, beech grove (1993)Norway, MossAFLP1


2 isolate(s) sharing typing data in supercluster 9

Click here to save the colored tree file or here for the uncolored tree.

Click here to save the table as a tab-delimited text file.

StrainSourceLocationShared Typing Data
B.thuringiensis HD540 GermanyAFLP2
B.thuringiensis HD201Animal, Insect, Greater Wax Moth/Honeycomb Moth (Galleria mellonella)UK, EnglandAFLP2


3 isolate(s) sharing typing data in supercluster 10

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.cereus MOD1Bc69Food, Paprika (2015)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc18Plant, Sesame Seed White (2015)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc75Plant, Sesame Seed (2015)USA, MarylandMLST(TH, H, K, CS, P)


72 isolate(s) sharing typing data in supercluster 11

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.thuringiensis HD521Soil, soybean fieldUSA, IndianaMLST(TH, H, K, CS, P)
B.thuringiensis GOE4#1Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(TH, H, K, CS, P)
B.c_group BAG4O-1SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.cereus AFS002530Plant, Weed leaf (2014)USA, OhioMLST(TH, H, K, CS, P)
B.cereus AFS096226Plant, Soybean leaf (2013)USA, MinnesotaMLST(TH, H, K, CS, P)
B.cereus AFS033276Plant, tree leaf (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.c_group BAG3O-2SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.cereus AFS009734Plant, Weed core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS064975(2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS034541Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS002102Plant, Soybean leaf (2013)USA, MinnesotaMLST(TH, H, K, CS, P)
B.cereus AFS060282Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS011006Plant, Soybean leaf (2013)USA, MinnesotaMLST(TH, H, K, CS, P)
B.cereus AFS001073Plant, Weed leaf (2014)USA, OhioMLST(TH, H, K, CS, P)
B.cereus tsu1Other, contaminated cellulose-agar plate (2009)USA, Tennessee, NashvilleMLST(TH, H, K, CS, P)
B.cereus AFS072350Plant, Soybean leaf (2013)USA, MinnesotaMLST(TH, H, K, CS, P)
B.cereus AFS016365Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS097474Plant, Weed leaf (2014)USA, IndianaMLST(TH, H, K, CS, P)
B.cereus AFS003410Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus AFS041041Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus K8#2Food, Korean fermented food (2016)Korea (South)MLST(TH, H, K, CS, P)
B.cereus AFS015304Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS063157Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus LCR12Plant, karkalla (Carpobrotus rossii) (2014) [from Cadmium-contaminated soil]Australia, MelbourneMLST(TH, H, K, CS, P)
B.cereus FSLW8-0767Other, Sifter powder (2012)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS029029Plant, Corn (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS051626Plant, Weed leaf (2014)USA, IndianaMLST(TH, H, K, CS, P)
B.cereus AFS093833Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS003807Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, P, clpc, dinb, gdpd, purf)
B.thuringiensis BGSC4BF1 GermanyMLST(TH, H, K, P, dinb, gdpd, purf, yhfl)
B.cereus AFS086321Plant, core (2014)USA, North CarolinaMLST(H, K, P, clpc, dinb, gdpd, purf, yhfl)
B.thuringiensis INTAFr7-4SoilArgentina, MisionesMLST(TH, H, K, P, clpc, dinb, gdpd, purf)
B.cereus AFS070889Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, P, clpc, dinb, gdpd, yhfl)
B.cereus 172560.WHuman, burn wound (2003) [human wound infection]UK, Scotland, GlasgowMLST(TH, H, K, P, clpc, gdpd, purf)
B.cereus AFS024973Plant, core (2014)USA, North CarolinaMLST(H, CS, gmk, gyrb, ilvd, mdh, muts, pta, purh, pyca1, pyca2, rpob, tpi)
B.cereus MOD1Bc57Other, Baby Wipes (2016)USA, MarylandMLST(H, K, CS, gmk, ilvd, purh, pyca2, tpi)
B.cereus SJ-S19HumanUSA, Tennessee, MemphisMLST(TH, H, K, clpc, dinb, gdpd, gmk, ilvd, tpi, yhfl)
B.cereus AFS099102Plant, Weed leaf (2014)USA, IndianaMLST(TH, H, K, clpc, dinb, gdpd, gmk, ilvd, purf, tpi)
B.cereus MOD1Bc139Food, Dietary Supplements (2015)USA, MarylandMLST(TH, H, P, dinb, gdpd, gyrb, mdh, muts, purf, pyca1, rpob, yhfl)
B.cereus SJ-S22  MLST(P, ccpa, dinb, ftsa, gdpd, glpt, gyrb, mbl, mdh, muts, panc, purf, pyca1, pyre, recf, succ, yhfl)
B.cereus AFS041581Plant, Soybean root (2014)USA, MissouriMLST(P, adk, clpc, dinb, ftsa, gdpd, glpt, gyrb, mdh, muts, purf, pyca1, pyre, rpob, succ, yhfl)
B.cereus A1Other, sludge of an anaerobic digestion reactor (2011) [efficient starch-utilizing producer of hydrogen]China, BeijingMLST(K, P, adk, ccpa, ftsa, panc, pyre, recf, succ, yhfl)
B.cereus AH1134Human, eye [pediatric endophthalmitis case]USA, OklahomaMLST(TH, H, K, dinb, gdpd, purf, tpi)
B.cereus SJ-S5HumanUSA, Tennessee, MemphisMLST(K, adk, ccpa, clpc, dinb, glpf, glpt, gmk, ilvd, pta, purf, purh, pyre, recf, succ)
B.cereus SJ-S10HumanUSA, Tennessee, MemphisMLST(K, adk, ccpa, clpc, ftsa, gdpd, glpf, glpt, ilvd, pta, purf, pyca2, pyre, recf, tpi)
B.cereus AFS093276Plant, core (2014)USA, North CarolinaMLST(P, adk, dinb, ftsa, gdpd, glpt, gyrb, mdh, muts, purf, pyre, recf, rpob, succ)
B.cereus SJ-S29HumanUSA, Tennessee, MemphisMLST(K, ccpa, ftsa, gdpd, glpt, gmk, ilvd, panc, pta, purf, purh, pyca2, pyre, succ, tpi)
B.thuringiensis DB27[highly nematicidal] MLST(K, P, ftsa, glpt, purf, recf)
B.c_group AH1129Human, eyeUSA, OklahomaMLST(TH, H)
B.thuringiensis HD516Soil, soybean fieldUSAAFLP2 MLST(P)
B.thuringiensis 2008724754Animal, Insect, dung beetle (2009)GermanyMLST(P)
B.thuringiensis IBL3576Soil (1983)USA, PennsylvaniaMLST(P)
B.cereus S6637Soil (2007)USA, Maryland, RockvilleMLST(P)
B.thuringiensis 2008724755Animal, Insect, dung beetle (2009)GermanyMLST(P)
B.c_group K14_5491(2014)Korea (South)MLST(P)
B.c_group C3g6Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.cereus B06_034HumanFranceMLST(TH)
B.cereus F95/2410Human, gangrene, cellulitis; Public Health Laboratory (1995)UK, Wales, CardiffMLST(P)
B.thuringiensis 2013746963Human, blood (2013) [human vomiting]USA, California, San DiegoMLST(P)
B.cereus E1149Human, lung (1978)USA, MissouriMLST(P)
B.cereus 101937.QHuman, wound infection (2004)UK, ScotlandMLST(P)
B.c_group KW38[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.c_group FSLM8-0139Dairy products, milk products (2012)USAMLST(P)
B.thuringiensis T13028Soil (1993)ChileMLST(P)
B.thuringiensis IBL77Soil (1988)USA, WyomingMLST(P)
B.c_group KW22[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.cereus 180215.FHuman, wound infection (2004)UK, ScotlandMLST(P)
B.thuringiensis 2008724756Animal, Insect, dung beetle (2009)GermanyMLST(P)
B.cereus 140936.SHuman, wound infection (2004)UK, ScotlandMLST(P)
B.c_group Wang  MLST(P)
B.thuringiensis IBL673Soil (1987)USA, New HampshireMLST(P)
B.thuringiensis HD511Soil, barley fieldUSA, North DakotaAFLP2


219 isolate(s) sharing typing data in supercluster 12

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.anthracis A0465Animal, cattle (Cow), spleen (1997) [two complete genomes sequenced for this strain with identical MLST sequences; pXO1+/pXO2+]France, Pyrenees mountainsAFLP2 MLST(TH, H, K, CS, P)
B.anthracis Sterne USAAFLP1 MLST(TH, H, K, CS, P)
B.anthracis Australia94Animal, cattle (Bovine) (1994) [pXO1+/pXO2+]Australia, Victoria ProvinceAFLP2 MLST(TH, H, K, CS, P)
B.anthracis K8215[pXO1+/pXO2+]ArgentinaAFLP2 MLST(TH, H, K, CS, P)
B.anthracis Vollum[this strain is used in research studies and is found in the UK, Spain, and Zimbabwe; pXO1+/pXO2+; two complete genomes sequenced for this strain with identical MLST sequences] AFLP1 MLST(TH, H, K, CS, P)
B.anthracis A0463Animal, sheep (1978) [reported as pXO1+/pXO2+ but no pXO2 sequence in genome]PakistanAFLP2 MLST(TH, H, K, CS, P)
B.anthracis K4516Animal, cattle (Bovine) (1939) [pXO1+/pXO2+]USA, MarylandAFLP2 MLST(TH, H, K, CS, P)
B.anthracis ATCC14185Animal, cattle (bovine) (1951) [United States Human Vaccine strain; pXO1+/pXO2-; two complete genomes sequenced for this strain with identical MLST sequences]USA, FloridaAFLP2 MLST(TH, H, K, CS, P)
B.anthracis A0248Human (1968) [pXO1+/pXO2+]USA, OhioAFLP2 MLST(TH, H, K, CS, P)
B.anthracis K1285[pXO1+/pXO2+]NamibiaAFLP2 MLST(TH, H, K, CS, P)
B.anthracis K3Human [pXO1+/pXO2+]South AfricaMLST(TH, H, K, CS, P)
B.anthracis Ba-7673/89-GeoSoil (1989)GeorgiaMLST(TH, H, K, CS, P)
B.anthracis 3166SoilBulgariaMLST(TH, H, K, CS, P)
B.anthracis Ba-8784/92-GeoFood, Beef (1992)GeorgiaMLST(TH, H, K, CS, P)
B.anthracis Canadian_bisonAnimal, Bison [pXO1+/pXO2+]CanadaMLST(TH, H, K, CS, P)
B.anthracis TI[Soviet Union livestock vaccine strain; pXO1+/pXO2+]USSRMLST(TH, H, K, CS, P)
B.anthracis K2129(1997)China, ChangpingMLST(TH, H, K, CS, P)
B.anthracis 2000031006(1956)USA, New MexicoMLST(TH, H, K, CS, P)
B.anthracis 2000032979 USA, New JerseyMLST(TH, H, K, CS, P)
B.anthracis Sen3 SenegalMLST(TH, H, K, CS, P)
B.anthracis P482  MLST(TH, H, K, CS, P)
B.anthracis PR09-4 USAMLST(TH, H, K, CS, P)
B.anthracis ANSES94  MLST(TH, H, K, CS, P)
B.anthracis Shikan-NIIDAnimal, horse (1928) [pXO1+/pXO2+; two complete genomes sequenced for this strain with identical MLST sequences]Japan, TokyoMLST(TH, H, K, CS, P)
B.anthracis BF1Animal, cattle (cow) carcass (2009) [from a cow that had succumbed to anthrax; pXO1+/pXO2+]Germany, BavariaMLST(TH, H, K, CS, P)
B.anthracis PR10-4 USAMLST(TH, H, K, CS, P)
B.anthracis PR07 USAMLST(TH, H, K, CS, P)
B.anthracis 44-NIAH[pXO1+/pXO2+; two complete genomes sequenced for this strain with identical MLST sequences] MLST(TH, H, K, CS, P)
B.anthracis SVA11Animal, cattle (2011) [from an outbreak in cattle that occurred in a Swedish nature reserve; pXO1+/pXO2+]SwedenMLST(TH, H, K, CS, P)
B.anthracis CNEVAHuman [pXO1+/pXO2+]France (Southern)MLST(TH, H, K, CS, P)
B.anthracis 2000031027Animal, cattle (1957)USA, OklahomaMLST(TH, H, K, CS, P)
B.anthracis A1055[belongs to the divergent C branch; pXO1-/pXO2+]USA, LouisianaMLST(TH, H, K, CS, P)
B.anthracis 2000032989  MLST(TH, H, K, CS, P)
B.anthracis 500  MLST(TH, H, K, CS, P)
B.anthracis Ba-9108/08-GeoHuman, Patient ulcer (2008)GeorgiaMLST(TH, H, K, CS, P)
B.anthracis 2000032975(1966) MLST(TH, H, K, CS, P)
B.anthracis PR02 USAMLST(TH, H, K, CS, P)
B.anthracis 663  MLST(TH, H, K, CS, P)
B.anthracis ANSES101  MLST(TH, H, K, CS, P)
B.anthracis ANSES00-82Animal, cattle (bovine) (2000)France, SavoieMLST(TH, H, K, CS, P)
B.anthracis Ba-9065/08-GeoHuman, Patient ulcer (2008)GeorgiaMLST(TH, H, K, CS, P)
B.anthracis 4599Human, Scottish heroin user (2009)UK, Scotland, GlasgowMLST(TH, H, K, CS, P)
B.anthracis 3154SoilBulgariaMLST(TH, H, K, CS, P)
B.anthracis BFV[pXO1+/pXO2+] MLST(TH, H, K, CS, P)
B.anthracis K0021Animal, Sheep (1995)ItalyMLST(TH, H, K, CS, P)
B.anthracis PR01 USAMLST(TH, H, K, CS, P)
B.anthracis BA1004(2000) [pXO1+/pXO2+]USA, TexasMLST(TH, H, K, CS, P)
B.anthracis DS201579Animal, Blue Wildebeest (Connochaetes taurinus) (2015)South Africa, Kruger National Park, PafuriMLST(TH, H, K, CS, P)
B.anthracis A.Br.003Human, child cutaneous anthraxUK, Scotland, DundeeMLST(TH, H, K, CS, P)
B.anthracis Sen2Col2 SenegalMLST(TH, H, K, CS, P)
B.anthracis K1Soil (2014)Namibia, Etosha National ParkMLST(TH, H, K, CS, P)
B.anthracis 9080-GSoil (1998) [pXO1+/pXO2+]Georgia, GardabaniMLST(TH, H, K, CS, P)
B.anthracis 52-GAnimal, cattle (bovine) (2009) [pXO1+/pXO2+]Georgia, TbilisiMLST(TH, H, K, CS, P)
B.anthracis H9401Human, cutaneous anthrax patient [pXO1+/pXO2+]Korea (South)MLST(TH, H, K, CS, P)
B.anthracis PollinoAnimal, cattle (bovine) carcass (2014) [from a bovine anthrax-burial site; pXO1+/pXO2+]Italy, Pollino National Park, BasilicataMLST(TH, H, K, CS, P)
B.anthracis Kafkas-60Animal, Sheep (2006)Turkey, ArpacayMLST(TH, H, K, CS, P)
B.anthracis 95014[pXO1+/pXO2-] MLST(TH, H, K, CS, P)
B.anthracis Kafkas-68Animal, Cattle (2007)Turkey, KarsMLST(TH, H, K, CS, P)
B.anthracis Ba-1897/12-GeoFood, Beef (2012)GeorgiaMLST(TH, H, K, CS, P)
B.anthracis K3974(1995)SlovakiaMLST(TH, H, K, CS, P)
B.anthracis ANSES89  MLST(TH, H, K, CS, P)
B.anthracis ANSES88  MLST(TH, H, K, CS, P)
B.anthracis Parent2 USAMLST(TH, H, K, CS, P)
B.anthracis 781  MLST(TH, H, K, CS, P)
B.anthracis ANSES118  MLST(TH, H, K, CS, P)
B.anthracis 2000031023Animal, cattle (1957) MLST(TH, H, K, CS, P)
B.anthracis Ba-8782/92-GeoAnimal, Sheepskin (1992)GeorgiaMLST(TH, H, K, CS, P)
B.anthracis FDAARGOS341Other, Colorado Serum Co., Anthrax Spore Vaccine (2015) MLST(TH, H, K, CS, P)
B.anthracis 2000032832  MLST(TH, H, K, CS, P)
B.anthracis Kafkas-86Animal, Cattle (2006)Turkey, KarsMLST(TH, H, K, CS, P)
B.anthracis Parent1 USAMLST(TH, H, K, CS, P)
B.anthracis PR08 USAMLST(TH, H, K, CS, P)
B.anthracis ANSES92  MLST(TH, H, K, CS, P)
B.anthracis K4834Animal, cattle (Bovine) (1997)AustraliaMLST(TH, H, K, CS, P)
B.anthracis Ames[pXO1-/pXO2-; Ames strain cured of the pXO1 and pXO2 plasmids at UK Defence Science and Technology Laboratory]UK, England, Porton DownMLST(TH, H, K, CS, P)
B.anthracis A1144[pXO1+/pXO2+; shows mucoid colony morphology]ArgentinaMLST(TH, H, K, CS, P)
B.anthracis A0021Animal, Hippopotamus (1997)Zambia, Western ProvinceMLST(TH, H, K, CS, P)
B.anthracis 2000032967  MLST(TH, H, K, CS, P)
B.anthracis 2000031765  MLST(TH, H, K, CS, P)
B.anthracis K2883Human (1997)IndiaMLST(TH, H, K, CS, P)
B.anthracis CDC684[originally labeled B.megaterium; shows significant attenuation of virulence; pXO1+/pXO2+] MLST(TH, H, K, CS, P)
B.anthracis BA1035Human, Clinical [pXO1+/pXO2+]South AfricaMLST(TH, H, K, CS, P)
B.anthracis 721  MLST(TH, H, K, CS, P)
B.anthracis HYU01Soil (2009) [pXO1+/pXO2+]Korea (South), ChangnyeongMLST(TH, H, K, CS, P)
B.anthracis A0389#2[pXO1+/pXO2+; two complete genomes sequenced for this strain with different MLST sequences; strain sequenced by Biosurveillance, MRIGlobal, Palm Bay, Florida, USA; sequences conflicting with isolate A0389#1]Indonesia, West Java, BekasiMLST(TH, H, K, CS, P)
B.anthracis 2000031038(1957) MLST(TH, H, K, CS, P)
B.anthracis A1075Animal, cattle [pXO1+/pXO2+]Chile, Lago Ranco-Valdivia Agricola Quillin Va. RegionMLST(TH, H, K, CS, P)
B.anthracis A1039Animal, cattle (1999)Bolivia, Santa CruzMLST(TH, H, K, CS, P)
B.anthracis Kafkas-215Soil (2014)Turkey, SelimMLST(TH, H, K, CS, P)
B.anthracis 2000032968  MLST(TH, H, K, CS, P)
B.anthracis P417  MLST(TH, H, K, CS, P)
B.anthracis Vollum1BHuman (1951) [weaponized Vollum substrain used in American warheads during the 1960-s; pXO1+/pXO2+]USAMLST(TH, H, K, CS, P)
B.anthracis 2000031039Animal, cattle (1957) MLST(TH, H, K, CS, P)
B.anthracis A16R[attenuated variant of strain A16; pXO1+/pXO2-] MLST(TH, H, K, CS, P)
B.anthracis PasteurAnimal, cat [pXO1-/pXO2+] MLST(TH, H, K, CS, P)
B.anthracis PR06 USAMLST(TH, H, K, CS, P)
B.anthracis ANSES32  MLST(TH, H, K, CS, P)
B.anthracis Tangail-1Soil (2012)Bangladesh, TangailMLST(TH, H, K, CS, P)
B.anthracis 2000031008 USA, AlabamaMLST(TH, H, K, CS, P)
B.anthracis StendalAnimal, cattle (bovine) (Bos bovis) (2012)Germany, Saxony-AnhaltMLST(TH, H, K, CS, P)
B.anthracis Sterne34F2Animal, cattle (cow) (1937) [Animal vaccine strain; pXO1+/pXO2-; two complete genomes sequenced for this strain with identical MLST sequences]South AfricaMLST(TH, H, K, CS, P)
B.anthracis K2Soil (2014)Namibia, Etosha National ParkMLST(TH, H, K, CS, P)
B.anthracis PR05 USAMLST(TH, H, K, CS, P)
B.anthracis Turkey32Human, skin (1991) [pXO1+/pXO2+]Turkey, YozgatMLST(TH, H, K, CS, P)
B.anthracis 2002013094Soil (1956) [pXO1+/pXO2+; two complete genomes sequenced for this strain with identical MLST sequences]USAMLST(TH, H, K, CS, P)
B.anthracis Ba-8785/92-GeoHuman, Patient ulcer (1992)GeorgiaMLST(TH, H, K, CS, P)
B.anthracis PR09-1 USAMLST(TH, H, K, CS, P)
B.anthracis ANSES08-8_20Animal, cattle (bovine) (2008)France, DoubsMLST(TH, H, K, CS, P)
B.anthracis Tyrol4675Animal, cattle (Cow) (1988)Austria, TyrolMLST(TH, H, K, CS, P)
B.anthracis 55-VNIIVViMOther, Commercial vial (2014)Georgia, TbilisiMLST(TH, H, K, CS, P)
B.anthracis K1129Animal, goat hair (1995)PakistanMLST(TH, H, K, CS, P)
B.anthracis ANSES122  MLST(TH, H, K, CS, P)
B.anthracis 2000031075Animal, cattleSouth AfricaMLST(TH, H, K, CS, P)
B.anthracis AmesAncAnimal, cattle (Cow) (1981) [this strain is the progenitor of all the Ames strains used as research tools in laboratories around the world; pXO1+/pXO2+]USA, Texas, SaritaMLST(TH, H, K, CS, P)
B.anthracis ANSES86  MLST(TH, H, K, CS, P)
B.anthracis 2000031031Human (1957)USA, MassachusettsMLST(TH, H, K, CS, P)
B.anthracis deltaSterne[pXO1-/pXO2-] MLST(TH, H, K, CS, P)
B.anthracis 52-40-NIAHAnimal, horse (1940) [pXO1+/pXO2+; two complete genomes sequenced for this strain with identical MLST sequences]ChinaMLST(TH, H, K, CS, P)
B.anthracis WestNAAnimal, Bison [pXO1+/pXO2+]CanadaMLST(TH, H, K, CS, P)
B.anthracis CZC5Animal, Hippopotamus tissues (2011) [from hippopotamuses that had died during an anthrax outbreak]ZambiaMLST(TH, H, K, CS, P)
B.anthracis KrugerB[pXO1+/pXO2+]South Africa, Kruger National ParkMLST(TH, H, K, CS, P)
B.anthracis A16[pXO1+/pXO2+] MLST(TH, H, K, CS, P)
B.anthracis Ba-8884/94-GeoHuman, Patient ulcer (1994)GeorgiaMLST(TH, H, K, CS, P)
B.anthracis 2000031709(1956)USA, CarolinasMLST(TH, H, K, CS, P)
B.anthracis Kafkas-100Soil (2009)Turkey, DigorMLST(TH, H, K, CS, P)
B.anthracis A0157Animal, Pig (1996) [derived from strain ATCC4728; pXO1-/pXO2+]USAMLST(TH, H, K, CS, P)
B.anthracis 2000032819  MLST(TH, H, K, CS, P)
B.anthracis 2000032951Human (1958) MLST(TH, H, K, CS, P)
B.anthracis 14RA5914Animal, cattle (bovine) (Bos primigenius taurus) spleen (2014)Germany, DobichauMLST(TH, H, K, CS, P)
B.anthracis Carbosap[attenuated, toxigenic, capsulated strain; shows significant attenuation of virulence; used in Italy as a live spore vaccine for cattle and sheep; pXO1+/pXO2+; two complete genomes sequenced for this strain with identical MLST sequences between]Somalia, Asmara, Institute Vacci nogeno or Italy, RomeMLST(TH, H, K, CS, P)
B.anthracis STI-1[vaccine strain; pXO1+/pXO2-]RussiaMLST(TH, H, K, CS, P)
B.anthracis Kafkas-149Soil (2012)Turkey, SelimMLST(TH, H, K, CS, P)
B.anthracis FloridaHuman [from bioterror mailing attacks in 2001; pXO1+/pXO2+]USA, FloridaMLST(TH, H, K, CS, P)
B.anthracis Ba-8776/92-GeoHuman, Patient ulcer (1992)GeorgiaMLST(TH, H, K, CS, P)
B.anthracis SPV842_15Animal, cattle (bovine) (Bos taurus) liver [from bovine aborted fetus] (2015)BrazilMLST(TH, H, K, CS, P)
B.anthracis STI1Other, laboratory strain (1970) [vaccine strain; pXO1+/pXO2-]Russia, SaratovMLST(TH, H, K, CS, P)
B.anthracis Kafkas-78Animal, Cattle (2008)Turkey, KarsMLST(TH, H, K, CS, P)
B.anthracis Smith1013[pXO1-/pXO2+] MLST(TH, H, K, CS, P)
B.anthracis Gmb1 GambiaMLST(TH, H, K, CS, P)
B.anthracis A0389#1[pXO1+/pXO2+; two complete genomes sequenced for this strain with different MLST sequences; strain sequenced by Los Alamos National Laboratory, Los Alamos, New Mexico, USA; sequences conflicting with isolate A0389#2]Indonesia, West Java, BekasiMLST(H, K, CS, gmk, ilvd, pta, purh, pyca2, tpi)
B.anthracis A0193Animal, cattle (cow) (1996) [pXO1+/pXO2+]USA, South DakotaAFLP2 MLST(K, CS, ccpa, ftsa, glpt, gmk, ilvd, pta, purh, pyca2, pyre, recf, succ, tpi)
B.anthracis 8903-GSoil (1997) [pXO1+/pXO2+]Georgia, GardabaniMLST(TH, K, CS, P, ftsa, pyre, recf)
B.anthracis A0174Animal, cattle (bovine) (1974) [pXO1+/pXO2-]CanadaMLST(H, K, CS, gmk, ilvd, pta, purh, pyca2, tpi)
B.anthracis OhioACBAnimal, pig [pXO1+/pXO2+]USA, OhioMLST(TH, K, CS, P, ftsa, recf, succ)
B.anthracis Ba-1802/12-GeoHuman, Patient ulcer (2012)GeorgiaMLST(H, K, P, clpc, dinb, gdpd, purf, yhfl)
B.anthracis A0488Animal, cattle (cow) (1935) [pXO1+/pXO2+]UK, England, OxfordshireAFLP2 MLST(K, CS, ccpa, ftsa, glpt, gmk, ilvd, pta, purh, pyca2, pyre, recf, succ, tpi)
B.anthracis LarissaAnimal, sheep (Ovis) (2012)GreeceMLST(TH, H, K, P, clpc, gdpd, purf, yhfl)
B.anthracis ANSES99-100Animal, cattle (bovine) (1999)France, NievreMLST(TH, H, K, CS, ilvd, purh, tpi)
B.anthracis 2000031052Animal, cattle (1956)USA, WyomingMLST(TH, K, CS, P, ftsa, recf, succ)
B.anthracis 2000032879(1962) MLST(TH, H, K, CS, gmk, ilvd, tpi)
B.anthracis BrazilianVaccinalAnimal, cattle (bovine) (Bos taurus) Vaccine strain (2016)BrazilMLST(TH, H, K, CS, gmk, purh, tpi)
B.anthracis Zimbabwe89 ZimbabweMLST(TH, H, K, P, dinb, gdpd, purf, yhfl)
B.anthracis ANSES90  MLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.anthracis SK-102Other, Wool from Pakistan (1976) [pXO1+/pXO2+]USA, New JerseyMLST(TH, H, CS, P, gyrb, mbl, mdh, muts, pyca1)
B.anthracis A0442Animal, Kudu (1975) [pXO1+/pXO2+]South Africa, Kruger National ParkAFLP2 MLST(K, CS, ccpa, ftsa, glpt, gmk, ilvd, pta, purh, pyca2, pyre, recf, tpi)
B.anthracis UR-1Human, blood (2012) [from a german heroin user; fatal case of injectional anthrax; pXO1+/pXO2+]Germany, BavariaMLST(TH, K, P, clpc, dinb, gdpd, pyre, recf, succ, yhfl)
B.anthracis 2000032892  MLST(H, K, clpc, dinb, gdpd, glpf, gmk, ilvd, pta, purf, purh, pyca2, yhfl)
B.anthracis HanAnimal, dead cow blood (2013) [from the site of an anthrax outbreak]China, Liaoning ProvinceMLST(K, CS, adk, ccpa, glpt, gmk, ilvd, pta, purh, pyca2, pyre, recf, tpi)
B.anthracis Cvac02Animal, dead cow blood (2013) [from the site of an anthrax outbreak]China, Liaoning ProvinceMLST(TH, K, P, clpc, dinb, pyre, recf, succ, yhfl)
B.anthracis A15[University of Hohenheim; pXO1+/pXO2-]Germany, HohenheimMLST(H, P)
B.anthracis Mali[University of Goettingen; pXO1+/pXO2-]Germany, GoettingenMLST(H, P)
B.anthracis 13/38[Federal Research Centre for Virus Diseases of Animals (BFAV); pXO1+/pXO2+]Germany, JenaMLST(H, P)
B.anthracis 53/59[Federal Research Centre for Virus Diseases of Animals (BFAV); pXO1+/pXO2+]Germany, JenaMLST(H, P)
B.anthracis 4463[Federal Research Centre for Virus Diseases of Animals (BFAV); pXO1+/pXO2+]Germany, JenaMLST(H, P)
B.anthracis 527[Federal Research Centre for Virus Diseases of Animals (BFAV); pXO1+/pXO2+]Germany, JenaMLST(H, P)
B.anthracis 19/57[Federal Research Centre for Virus Diseases of Animals (BFAV); pXO1+/pXO2+]Germany, JenaMLST(H, P)
B.anthracis UDIII-7[Federal Research Centre for Virus Diseases of Animals (BFAV); pXO1+/pXO2+]Germany, JenaMLST(H, P)
B.anthracis B11/38[Federal Research Centre for Virus Diseases of Animals (BFAV); pXO1+/pXO2+]Germany, JenaMLST(H, P)
B.anthracis 19/37[Federal Research Centre for Virus Diseases of Animals (BFAV); pXO1+/pXO2+]Germany, JenaMLST(H, P)
B.anthracis 2157[University of Goettingen; pXO1+/pXO2+]Germany, GoettingenMLST(H, P)
B.anthracis 5261[Federal Research Centre for Virus Diseases of Animals (BFAV); pXO1-/pXO2+]Germany, JenaMLST(H, P)
B.anthracis B22/39[Federal Research Centre for Virus Diseases of Animals (BFAV); pXO1+/pXO2+]Germany, JenaMLST(H, P)
B.anthracis A58[University of Hohenheim; pXO1-/pXO2-]Germany, HohenheimMLST(H, P)
B.anthracis Behring[Federal Research Centre for Virus Diseases of Animals (BFAV); pXO1-/pXO2+]Germany, JenaMLST(H, P)
B.anthracis BCAnimal, cattle (cow) [pXO1-/pXO2+]Korea (South), BongcheonMLST(K, P)
B.anthracis CAU-1Human, blood (1994) [septicaemia anthrax; pXO1+/pXO2+; pXO1+/pXO2+]Korea (South), Kyungjoo CityMLST(K, P)
B.anthracis Pasteur2[pXO1+/pXO2- or pXO1-/pXO2-] MLST(K, P)
B.anthracis B19/39[Federal Research Centre for Virus Diseases of Animals (BFAV); pXO1+/pXO2+]Germany, JenaMLST(P, adk, ccpa, ftsa, glpt, recf, succ)
B.anthracis ATCC14186[pXO1+/pXO2-] MLST(K, P)
B.anthracis 7700[pXO1-/pXO2-]AfricaMLST(TH, H)
B.anthracis NVH93Animal, cattle (Bovine) (1993)NorwayMLST(TH, H)
B.anthracis NVH87Animal, cattle (Bovine) (1987)NorwayMLST(TH, H)
B.anthracis EPI674Human, muscle, Heroin abuserNorwayMLST(TH, H)
B.anthracis A0462#1Animal, Guinea pig (1988) [Ames strain reisolated from guinea pig; pXO1+/pXO2+]UKAFLP2 MLST(P)
B.anthracis A0102Animal, pig (1944) [pXO1+/pXO2+]Mozambique, MaputoAFLP2 MLST(P)
B.anthracis A0034Animal, cattle (bovine) (1990) [cattle anthrax; pXO1+/pXO2+]China, ChangpingAFLP2 MLST(P)
B.anthracis A0062Animal, cattle (bovine) (1962) [pXO1+/pXO2+ or pXO1-/pXO2+]PolandAFLP2 MLST(P)
B.anthracis CN2Soil (2000) [pXO1+/pXO2+]Korea (South), ChangnyeongMLST(P)
B.anthracis ET-51B(2000)Namibia, Etosha National ParkMLST(P)
B.anthracis 2000031756[pXO1-/pXO2-] MLST(P)
B.anthracis CAU-2Human, blood (1994) [septicaemia anthrax; pXO1+/pXO2+]Korea (South), Kyungjoo CityMLST(P)
B.anthracis B04_025Animal, cattle (cow)FranceMLST(TH)
B.anthracis Ames_BA1004(2000)USAMLST(P)
B.anthracis ANT1HumanJapanMLST(P)
B.anthracis A73[University of Hohenheim; pXO1-/pXO2+]Germany, HohenheimMLST(H)
B.anthracis ET-79B(2000)Namibia, Etosha National ParkMLST(P)
B.anthracis 2002013066[pXO1-/pXO2-] MLST(P)
B.anthracis A0462#2Animal, dead cow (1981) [cattle]USAMLST(P)
B.anthracis B06_040SoilItalyMLST(TH)
B.anthracis B06_038SoilItalyMLST(TH)
B.anthracis ET-76B(2000)Namibia, Etosha National ParkMLST(P)
B.anthracis CN1Human, blood (2000) [septicaemia anthrax; pXO1+/pXO2+]Korea (South), ChangnyeongMLST(P)
B.anthracis 2000032882[pXO1-/pXO2+] MLST(P)
B.anthracis 2002721544[pXO1+/pXO2-] MLST(P)
B.anthracis CAU-3Human, blood (1994) [septicaemia anthrax; pXO1+/pXO2+]Korea (South), Kyungjoo CityMLST(P)
B.anthracis 2000031021SoilUSAMLST(P)
B.anthracis HSAnimal, cattle (Cow)KoreaMLST(K)
B.anthracis GJ-2Animal, cattle (Cow)KoreaMLST(K)
B.anthracis CNAnimal, cattle (Cow)KoreaMLST(K)
B.anthracis K0404  AFLP2
B.anthracis K2484[pXO1+/pXO2+]GermanyAFLP2
B.anthracis K9002[pXO1+/pXO2+]TurkeyAFLP2
B.anthracis K4241[pXO1+/pXO2+]ItalyAFLP2
B.anthracis K7948[pXO1+/pXO2+]TurkeyAFLP2
B.anthracis K6428[pXO1+/pXO2+]TurkeyAFLP2
B.anthracis K7038[pXO1+/pXO2+]Korea (South)AFLP2
B.anthracis K0123[pXO1+/pXO2+]ZambiaAFLP2
B.anthracis K7222[pXO1+/pXO2+]PakistanAFLP2
B.anthracis K7441 CanadaAFLP2


19 isolate(s) sharing typing data in supercluster 13

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.c_group MCCC1A00460Other, sediments (2005)Pacific OceanMLST(P)
B.c_group MCCC1A06361Other, sediments (2010)Gulf of MexicoMLST(P)
B.c_group MCCC1A00394Other, sediments (2005)Pacific OceanMLST(P)
B.c_group MCCC1A00239Other, sediments (2005)Pacific OceanMLST(P)
B.c_group MCCC1A00447Other, sediments (2005)Pacific OceanMLST(P)
B.c_group MCCC1A00262Other, sediments (2005)Pacific OceanMLST(P)
B.c_group MCCC1A06360Other, sediments (2010)Gulf of MexicoMLST(P)
B.c_group MCCC1A00267Other, sediments (2005)Pacific OceanMLST(P)
B.c_group MCCC1A00235Other, sediments (2005)Pacific OceanMLST(P)
B.c_group MCCC1A00266Other, sediments (2005)Pacific OceanMLST(P)
B.c_group MCCC1A00268Other, sediments (2005)Pacific OceanMLST(P)
B.c_group MCCC1A00265Other, sediments (2005)Pacific OceanMLST(P)
B.c_group MCCC1A00431Other, sediments (2005)Pacific OceanMLST(P)
B.c_group MCCC1A00395Other, sediments (2005)Pacific OceanMLST(P)
B.c_group MCCC1A06359Other, sediments (2010)Gulf of MexicoMLST(P)
B.c_group MCCC1A00274Other, sediments (2005)Pacific OceanMLST(P)
B.cereus BGSC6A88Human, wound infection (2004) [sequences conflicting with isolate 179989.X]UK, ScotlandMLST(P)
B.c_group MCCC1A00430Other, sediments (2005)Pacific OceanMLST(P)
B.c_group MCCC1A00419Other, sediments (2005)Pacific OceanMLST(P)


6 isolate(s) sharing typing data in supercluster 14

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.cereus AFS080002Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS028292Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS064200Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS065496Plant, Corn core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS039661Soil (2014)USA, New YorkMLST(H, CS, glpf, gmk, gyrb, ilvd, mdh, muts, purh, pyca1, pyca2, rpob, tpi)
B.cereus AFS075781Plant, Soybean core (2014)USA, IowaMLST(TH, CS, P, ftsa, gyrb, mdh, muts, pyca1, recf, rpob, succ)


43 isolate(s) sharing typing data in supercluster 15

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.cereus 822BCERHumanUSA, WashingtonMLST(TH, H, K, CS, P)
B.cereus AFS030229Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus FSLW8-0268Other, Evaporator (last effect) - Liquid (WIP) (2012)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus 823BTHUHumanUSA, WashingtonMLST(TH, H, K, CS, P)
B.cereus 820BCERHumanUSA, WashingtonMLST(TH, H, K, CS, P)
B.cereus SJ-S21HumanUSA, Tennessee, MemphisMLST(TH, H, K, CS, P)
B.cereus B4118Food (2013)NetherlandsMLST(TH, H, K, CS, P)
B.cereus MOD1Bc77Plant, Sesame Seed (2015)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus DSM626(1966)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus N31Other, Sediments (2002)China, South China SeaMLST(TH, H, K, CS, P)
B.cereus SJ-S17HumanUSA, Tennessee, MemphisMLST(TH, H, K, P, clpc, dinb, purf, yhfl)
B.cereus FORC005Food, chicken cutlett (2014)Korea (South), InchonMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.thuringiensis GOE3#1Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(H, K, CS, gmk, ilvd, pta, purh, pyca2, tpi)
B.cereus 29Animal, crab (Callinectes sp.) gastrointestinal tract (2016)Brazil, Ceara, Pacoti River, FortalezaMLST(H, K, CS, glpf, gmk, ilvd, pta, tpi)
B.cereus #17Animal, Mouse microbiota MLST(TH, H, P, clpc, dinb, gdpd, gyrb, mbl, mdh, purf, pyca1, rpob)
B.cereus AFS009840Plant, core (2014)USA, North CarolinaMLST(TH, H, P, clpc, dinb, gdpd, gyrb, mdh, muts, purf, pyca1, rpob)
B.cereus INRAA3Food, starch (1998) (1998)France, NormandieMLST(H, K, clpc, dinb, glpf, gmk, ilvd, panc, pta, purf, purh, tpi, yhfl)
B.cereus A50(2014)AustraliaMLST(TH, H, CS, gmk, gyrb, mdh, muts, purh, pyca1, rpob, tpi)
B.cereus FORC048Plant, Sesame leaf (2014)Korea (South), GwangjuMLST(TH, K, P, clpc, dinb, ftsa, gdpd, purf, pyre, recf)
B.cereus AFS099306Plant, core (2014)USA, North CarolinaMLST(H, K, P, clpc, dinb, purf)
B.cereus MIT0214Other, Deep subsurface (2010) [isolated through enrichment of samples from geologic sequestration sites in pressurized bioreactors containing a supercritical CO2 headspace]USA, TexasMLST(H, K, clpc, dinb, gdpd, gmk, ilvd, panc, purf, purh, pyca2, tpi)
B.cereus AFS033081Animal, Insect, beetle (2013)USA, North CarolinaMLST(TH, H, clpc, dinb, gdpd, gmk, gyrb, ilvd, mdh, muts, purf, pyca1, rpob, tpi)
B.cereus AFS049840Plant, Wheat plant (2014)USA, North CarolinaMLST(TH, H, P, dinb, gyrb, mdh, muts, purf, pyca1, rpob, yhfl)
B.cereus m1550Food, uncooked chicken (1987)BrazilMLST(TH, H, K, P, dinb, yhfl)
B.cereus AFS004498(2014)USA, North CarolinaMLST(TH, H, clpc, dinb, gdpd, gmk, gyrb, ilvd, mdh, purf, purh, pyca1, rpob)
B.cereus D12_2Food, Korean fermented food (2016)Korea (South)MLST(K, adk, ccpa, clpc, dinb, ftsa, gdpd, glpt, gmk, pta, purf, pyca2, recf, succ, tpi, yhfl)
B.cereus 25#1Animal, crab (Ucides sp.) gastrointestinal tract (2016)Brazil, Ceara, Pacoti River, FortalezaMLST(K, adk, ccpa, clpc, dinb, gdpd, glpf, glpt, gmk, ilvd, panc, pta, pyre, recf, succ, tpi)
B.cereus AFS092659Plant, Corn core (2014)USA, North CarolinaMLST(K, adk, ccpa, clpc, dinb, ftsa, glpt, gmk, purf, purh, pyca2, recf, succ, tpi, yhfl)
B.cereus AFS082409Plant, core (2014)USA, North CarolinaMLST(H, clpc, dinb, gdpd, gmk, gyrb, mbl, mdh, pta, pyca1, pyca2, rpob, tpi)
B.cereus VD184  MLST(H, gdpd, glpf, gyrb, ilvd, muts, pta, purf, pyca1, pyca2, rpob, yhfl)
B.cereus B4264Human, blood and pleural fluid (1969) [human fatal pneumonia] MLST(K, adk, ccpa, dinb, ftsa, glpt, gmk, pta, purf, purh, pyca2, succ, tpi)
B.cereus BGSC6A1[Wild type isolate] MLST(CS, P)
B.c_group ATCC11778[B.cereus or B.mycoides]USA, New YorkAFLP1 AFLP2 MLST(P, mbl)
B.c_group K14_4228(2014)Korea (South)MLST(P)
B.cereus K15-3521Human, faeces/stools (2015)Korea (South)MLST(P)
B.thuringiensis S86  MLST(P)
B.cereus S6552Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus BGSC6A2[Wild type isolate] MLST(P)
B.thuringiensis BGSC4E6(1965) [sequences conflicting with isolate T04002]CanadaMLST(P)
B.c_group MCCC1A01404Other, sediments (2006)South China SeaMLST(P)
B.c_group DVM_32SoilJapanMLST(P)
B.cereus ATCC31293  AFLP1 AFLP2
B.c_group AH577Soil, beech grove (1993)Norway, MossAFLP1


10 isolate(s) sharing typing data in supercluster 16

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.thuringiensis IBL3565Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3792Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3682Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3683Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3681Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3793Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3791Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3795Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3794Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3680Soil (2009)USA, MarylandMLST(P)


3 isolate(s) sharing typing data in supercluster 17

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.thuringiensis IMSNU12090[derived from strain KCTC1509 cured of the insecticidal crystal toxin] MLST(K)
B.thuringiensis IMSNU11043  MLST(K)
B.thuringiensis IMSNU10051Animal, diseased insect larvae MLST(K)


41 isolate(s) sharing typing data in supercluster 18

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.cereus MOD1Bc199Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc181Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc194Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc197Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc62Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc193Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc59Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc196Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc200Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc186Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc191Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus Q1Other, deep-subsurface oil reservoirChina (Northeastern), Daqing oil fieldMLST(TH, H, K, CS, P)
B.cereus MOD1Bc188Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc178Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc61Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc202Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc192Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc185Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc65Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc180Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc179Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc60Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc183Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc198Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc56Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc63Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc189Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc58Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc204Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc182Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc195Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.c_group AH826Human, periodontitis (1996)Norway, RogalandMLST(TH, H)
B.c_group AH819Human, periodontitis (1995)Norway, OsloMLST(TH, H)
B.c_group AH825Human, periodontitis (1996)Norway, AkershusMLST(TH, H)
B.c_group AH829Human, periodontitis (1996)Norway, AkershusMLST(TH, H)
B.c_group AH824Human, periodontitis (1996)Norway, AkershusMLST(TH, H)
B.c_group AH828Human, periodontitis (1996)Norway, OsloMLST(TH, H)
B.c_group AH827Human, periodontitis (1996)Norway, HedmarkMLST(TH, H)
B.c_group AH823Human, periodontitis (1996)Norway, OsloMLST(TH, H)
B.c_group AH831Human, periodontitis (1996)Norway, OsloMLST(H, glpf, panc, pta)
B.c_group KW64[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)


10 isolate(s) sharing typing data in supercluster 19

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.pseudomycoides AFS017092Soil (2014)USA, New YorkMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.pseudomycoides AFS060037Soil (2014)USA, New YorkMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.mycoides SB4Food (2016)NetherlandsMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.pseudomycoides AFS018975Soil (2014)USA, New YorkMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.c_group VDM021SoilGreenlandMLST(K, CS, P, adk, ccpa, ftsa, pyre, succ)
B.pseudomycoides FSLK6-0042Dairy products, raw milk (2012)USA, New YorkMLST(K, P, adk, ccpa, clpc, dinb, ftsa, gdpd, purf, pyre, recf, succ, yhfl)
B.c_group VD136SoilUK, ScotlandMLST(K, adk, ccpa, clpc, dinb, ftsa, gdpd, glpf, gmk, ilvd, panc, pta, pyca2, pyre, recf, succ, tpi, yhfl)
B.c_group VDM006SoilSpainMLST(K, adk, ccpa, clpc, dinb, ftsa, gdpd, glpf, gmk, ilvd, panc, pta, pyca2, pyre, succ, tpi)
B.c_group FSLH8-0481Dairy products, milk products (2012)USAMLST(P)
B.c_group FSLK6-1142Other, environmental (2006)USAMLST(P)


45 isolate(s) sharing typing data in supercluster 20

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.mycoides WSBC10969Dairy products, raw milk (2014)GermanyMLST(TH, H, K, CS, P)
B.mycoides S3E15Soil (2016)NetherlandsMLST(TH, H, K, CS, P)
B.mycoides GM5LPPlant, English ray-grass (Lolium perenne)GermanyMLST(TH, H, K, CS, P)
B.mycoides GM6LPPlant, English ray-grass (Lolium perenne)GermanyMLST(TH, H, K, CS, P)
B.weihenstephanensis BtB2-4Soil, forest soil mud [emetic toxin/cereulide producer]BelgiumMLST(TH, H, K, CS, P)
B.mycoides MOD1Bc228Food, food product (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.mycoides M2E15Food, Potato (2014)NetherlandsMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4BQ1SoilSpainMLST(TH, H, K, CS, P)
B.weihenstephanensis CER057Food, parsley [emetic toxin/cereulide producer]BelgiumMLST(TH, H, K, CS, P)
B.c_group VDM019SoilGreenlandMLST(TH, H, K, CS, P)
B.mycoides FSLE2-0214Food, finished RTE dairy food product (2014)USAMLST(K, CS, P, adk, ftsa, glpt, pyre, recf, succ)
B.weihenstephanensis CER074Dairy products, raw milk [emetic toxin/cereulide producer]BelgiumMLST(TH, K, CS, P, ftsa, pyre, recf)
B.mycoides EC18Soil (2016)NetherlandsMLST(TH, K, CS, P, ftsa, pyre, succ)
B.mycoides SB8Soil (2016)NetherlandsMLST(TH, H, CS, P, gyrb, mbl, mdh, muts, pyca1)
B.mycoides S2E19Soil (2016)NetherlandsMLST(H, K, P, clpc, dinb, gdpd, purf)
B.c_group VDM022SoilGreenlandMLST(CS, P, adk, ftsa, glpt, gyrb, mdh, muts, pyca1, pyre, recf, rpob, succ)
B.mycoides FSLH7-0683Dairy products, pasteurized 2% milk (2005)USAMLST(TH, H, K, P, clpc, dinb, purf)
B.mycoides FSLM7-0109Dairy products, raw milk (2011)USAMLST(TH, K, P, clpc, dinb, ftsa, gdpd, pyre, succ)
B.mycoides MOD1Bc221Food, food product (2016)USA, MarylandMLST(TH, H, P, clpc, dinb, gyrb, mbl, mdh, muts, purf, pyca1)
B.c_group VD078SoilGreenlandMLST(TH, H, clpc, gdpd, gmk, mbl, mdh, muts, purh, pyca1, rpob, tpi)
B.mycoides B4117Food (2013)NetherlandsMLST(TH, H, dinb, gdpd, gmk, gyrb, ilvd, mdh, muts, pyca1, rpob, tpi)
B.mycoides ATCC6462SoilKorea (South), SeoulMLST(K, adk, ccpa, clpc, gdpd, glpf, gmk, ilvd, panc, purh, pyca2, pyre, recf, succ, yhfl)
B.mycoides FSLM7-0669Dairy products, raw milk (2011)USAMLST(K, P, adk, dinb, glpt, panc, purf, pyre, succ)
B.thuringiensis PLBPN37/1Soil (2012)PolandMLST(P)
B.c_group KW19[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.thuringiensis PLmBPN20Soil (2012)PolandMLST(P)
B.cereus 37R3Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. hereward grown in a plot in which the previous crop was wheat (Triticum aestivum) var. hereward]UK, England, RothamstedMLST(P)
B.thuringiensis PLmJAS15Soil (2012)PolandMLST(P)
B.thuringiensis PLmJAS20Soil (2012)PolandMLST(P)
B.cereus 37R5Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. cadenza grown in a plot in which the previous crop was wheat (Triticum aestivum) var. hereward]UK, England, RothamstedMLST(P)
B.c_group D10-8.A.iSoil (2006)UKMLST(P)
B.cereus 32R6Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. hereward grown in a plot in which the previous crop was wheat (Triticum aestivum) var. hereward]UK, England, RothamstedMLST(P)
B.cereus 22R5Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. x:19 grown in a plot in which the previous crop was wheat (Triticum aestivum) var. hereward]UK, England, RothamstedMLST(P)
B.weihenstephanensis Bw204Food (2005)UK, Wales, CardiffMLST(P)
B.cereus 58R3Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. hereward grown in a plot in which the previous crop was wheat (Triticum aestivum) var. cadenza]UK, England, RothamstedMLST(P)
B.cereus 37R1Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. hereward grown in a plot in which the previous crop was wheat (Triticum aestivum) var. hereward]UK, England, RothamstedMLST(P)
B.c_group D28-3.B.iSoil (2006)UKMLST(P)
B.cereus 37R6Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. hereward grown in a plot in which the previous crop was wheat (Triticum aestivum) var. hereward]UK, England, RothamstedMLST(P)
B.cereus 32R3Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. cadenza grown in a plot in which the previous crop was wheat (Triticum aestivum) var. hereward]UK, England, RothamstedMLST(P)
B.c_group D28-13.b.iSoil (2006)UKMLST(P)
B.c_group 9304Food (2004)UK, England, BristolMLST(P)
B.mycoides B0518  MLST(P)
B.c_group B951  MLST(P)
B.c_group PL15Soil MLST(P)
B.c_group E5i6Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)


11 isolate(s) sharing typing data in supercluster 21

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.cereus AFS012491Plant, Core Other Plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis JM-Mgvxx-63Other, oil-contaminated mangrove sediment (2013)Brazil, Sao Paulo, BertiogaMLST(TH, H, K, P, clpc, dinb, gdpd, yhfl)
B.cereus AFS085114Plant, Core Other Plant (2014)USA, North CarolinaMLST(H, K, clpc, dinb, gdpd, glpf, gmk, ilvd, panc, purf, pyca2, tpi)
B.thuringiensis BA04Soil (2013)India, AssamMLST(TH, H, CS, gyrb, ilvd, muts, pyca1, rpob, tpi)
B.thuringiensis HS18-1Soil (2009)China, Sichuan ProvinceMLST(H, clpc, gdpd, glpf, gmk, mdh, muts, purf, pyca1, pyca2, rpob, tpi)
B.cereus RIVMBC964Food, kebab (2002)NetherlandsMLST(H, clpc, glpf, gyrb, mdh, muts, panc, purh, pyca1, pyca2, rpob)
B.thuringiensis AFS065400Soil (2014)USA, New YorkMLST(H, clpc, gdpd, glpf, gyrb, ilvd, muts, pyca2, rpob, tpi)
B.cereus S6646Soil (2007)USA, Maryland, RockvilleMLST(P)
B.thuringiensis KBAD4Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBAD6Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBAD1Soil, Forest soil (2000)France, VersaillesMLST(CS)


141 isolate(s) sharing typing data in supercluster 22

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.thuringiensis HD542Animal, insectUSAAFLP2 AFLP3 MLST(TH, H, K, CS, P)
B.thuringiensis HD600Animal, Insect, silkworm (2007)JapanAFLP2 MLST(TH, H, K, CS, P)
B.thuringiensis BGSC4C1Animal, Insect, silkworm (Bombyx mori) (1987) [two complete genomes sequenced for this strain with identical MLST sequences]CzechoslovakiaAFLP2 MLST(TH, H, K, CS, P)
B.thuringiensis Lr7/2Other, Water (2011)Chile, Lirima thermal springsMLST(TH, H, K, CS, P)
B.thuringiensis L-7601(2015)China, TianjinMLST(TH, H, K, CS, P)
B.thuringiensis AFS066483Plant, Corn leaf (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS070359Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis WBt-2Soil (2003)China, Hebei, BaodingMLST(TH, H, K, CS, P)
B.c_group TIAC219Food MLST(TH, H, K, CS, P)
B.thuringiensis AFS046081Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS018331Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS056670Plant, Corn grainbin dust (2013)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS023096Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4AA1Soil (1987) [originally classified as B.thuringiensis tenebrionis; two complete genomes sequenced for this strain with identical MLST sequences]UKMLST(TH, H, K, CS, P)
B.thuringiensis AFS036437Food, Mushroom (2013)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS055470Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS054059Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS054136Plant, Corn grainbin dust (2013)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS059859(2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS086178(2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS065825Plant, Soybean root (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS029508Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS002494Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS095989Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS094730Plant, Soybean leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS030095Plant, Soybean root (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS093126Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS040661Plant, Corn leaf (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS066671Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4BR1Animal, Insect, Black Arches/Nun Moth (Lymantria monacha) larvaeDenmarkMLST(TH, H, K, CS, P)
B.thuringiensis AFS064999Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS046545Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS090355Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis HD12Soil (2012)USAMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4M3#2Animal, Insect, silkworm (Bombyx mori) (2013) [two complete genomes sequenced for this strain with different MLST sequences and origins; strain sequenced by Biology and Biochemistry, University of Bath, England, UK; sequences conflicting with isolate BGSC4M3#1]UKMLST(TH, H, K, CS, P)
B.thuringiensis AFS000517Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.c_group SchrouffFood MLST(TH, H, K, CS, P)
B.c_group VD022Other, Water from a small pond siteBelgiumMLST(TH, H, K, CS, P)
B.thuringiensis AFS032723Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS095482Other, excrement (2014)USA, IowaMLST(TH, H, K, CS, P)
B.c_group K-5975cFood MLST(TH, H, K, CS, P)
B.thuringiensis AFS004356Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS050333Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4AK1(1994)Korea (South)MLST(TH, H, K, CS, P)
B.thuringiensis BGSC4K1Animal, Insect, silkworm (Bombyx mori) (2013)UKMLST(TH, H, K, CS, P)
B.thuringiensis AFS019758Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS053027Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS043402Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS061760Plant, Corn (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4C3Animal, Insect, silkworm (Bombyx mori)FranceMLST(TH, H, K, CS, P)
B.thuringiensis AFS015413Plant, Corn grainbin dust (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS076262Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS022028Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS055421Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus G9842Human, faeces/stools (1996) [from the same food poisoning outbreak as isolates G9843 and G9844; human diarrhea]USA, NebraskaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4R1[Wild type isolate] MLST(TH, H, K, CS, P)
B.thuringiensis HD771  MLST(TH, H, K, CS, P)
B.thuringiensis AFS043499Plant, Soybean root (2013)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS054440Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS075396Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS022064Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.c_group MSX-A1  MLST(TH, H, K, CS, P)
B.thuringiensis AFS066485Food, Mushroom (2013)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis YBT-032SoilChinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS053994Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS016611Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS040987Plant, Soybean root (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS042804Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS031210Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS053253Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS050550Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.thuringiensis AFS075683Animal, earthworm (2013)USA, MinnesotaMLST(TH, H, CS, P, gyrb, mbl, mdh, muts, rpob)
B.thuringiensis AFS007900Plant, Soybean core (2014)USA, IowaMLST(TH, K, CS, P, ftsa, pyre, recf)
B.thuringiensis BGSC4E3[Wild type isolate]UKMLST(K, CS, P, ccpa, ftsa, glpt, pyre, recf, succ)
B.thuringiensis T04001 CanadaMLST(H, K, CS, gmk, ilvd, pta, purh, pyca2, tpi)
B.thuringiensis DAR81934#2[exhibits molluscicidal activity toward the pest snail Cernuella virgata; two complete genomes sequenced for this strain with different MLST sequences; strain sequenced by Joint Genome Institute, Walnut Creek, California, USA; sequences conflicting with isolate DAR81934#1]Australia, Port Campbell National ParkMLST(TH, H, CS, P, gyrb, mbl, mdh, muts, rpob)
B.thuringiensis AFS017371(2014)USA, IowaMLST(TH, H, K, P, dinb, gdpd, purf, yhfl)
B.cereus MOD1Bc143Food, Hybrid Tilapia (2006)USA, MarylandMLST(TH, H, P, clpc, dinb, gdpd, gyrb, mbl, muts, pyca1, rpob, yhfl)
B.thuringiensis DAR81934#1[exhibits molluscicidal activity toward the pest snail Cernuella virgata; two complete genomes sequenced for this strain with different MLST sequences; strain sequenced by School of Agricultural and Wine Sciences, Charles Sturt University, Wagga Wagga, New South Wales, Australia; sequences conflicting with isolate DAR81934#2]Australia, Port Campbell National ParkMLST(TH, CS, P, ftsa, gyrb, mbl, mdh, muts, recf, rpob, succ)
B.thuringiensis BGSC4BS1SoilSpainMLST(TH, H, CS, P, gyrb, mbl, muts, rpob)
B.thuringiensis BGSC4BZ1Soil, black soilChinaMLST(TH, H, P, clpc, dinb, gdpd, gyrb, mdh, muts, rpob, yhfl)
B.c_group HuB4-4SoilBelgiumMLST(TH, CS, P, ftsa, gyrb, mbl, mdh, muts, pyre, rpob)
B.thuringiensis AFS089089Plant, Corn grainbin dust (2013)USA, IowaMLST(P, adk, ccpa, clpc, dinb, ftsa, gdpd, glpt, gyrb, mdh, muts, pyca1, recf, rpob, yhfl)
B.thuringiensis AFS049207Other, excrement (2014)USA, IowaMLST(TH, P, clpc, gdpd, gyrb, muts, purf, pyca1, rpob, succ, yhfl)
B.thuringiensis IBL273Soil (1983) [bears Photorhabdus/Yersinia-like toxin genes]USA, WyomingMLST(P)
B.thuringiensis BGSC4K5  MLST(P)
B.thuringiensis T08023(1987)BrazilMLST(P)
B.thuringiensis T08012Animal, Insect, silkworm (Bombyx mori) (1980)PakistanMLST(P)
B.thuringiensis T04016Animal, Insect, silkworm (Bombyx mori) (1980)PakistanMLST(P)
B.thuringiensis T10018Animal, Insect, silkworm (Bombyx mori) (1982)JapanMLST(P)
B.thuringiensis IBL3579Soil (1983) [bears Photorhabdus/Yersinia-like toxin genes]USA, New YorkMLST(P)
B.cereus B06_032HumanFranceMLST(TH)
B.thuringiensis T08001(1963)USAMLST(P)
B.thuringiensis T04024(1981)PakistanMLST(P)
B.thuringiensis LFB1588Dairy products, pasteurized whole milk (2011)BrazilMLST(TH)
B.thuringiensis IBL122Soil (1983) [bears Photorhabdus/Yersinia-like toxin genes]USA, WyomingMLST(P)
B.thuringiensis IBL500Soil (1986) [bears Photorhabdus/Yersinia-like toxin genes]NorwayMLST(P)
B.thuringiensis 2810-S-16Plant, leaves of clover (Trifolium hybridum) (2004)UKMLST(P)
B.cereus G9844Human, faeces/stools (1996) [from the same food poisoning outbreak as isolates G9842 and G9843]USA, NebraskaMLST(P)
B.thuringiensis T04002(1965) [sequences conflicting with isolate BGSC4E6]CanadaMLST(P)
B.thuringiensis 4btt USAMLST(P)
B.cereus G9843Human, faeces/stools (1996) [from the same food poisoning outbreak as isolates G9842 and G9844]USA, NebraskaMLST(P)
B.thuringiensis IBL1410Other, Novodor bio-insecticide from Mycogen (1994)USA, California, San DiegoMLST(P)
B.thuringiensis IBL10011[bears Photorhabdus/Yersinia-like toxin genes] MLST(P)
B.c_group 295618Other, heroinUKMLST(TH)
B.thuringiensis IBL10010[bears Photorhabdus/Yersinia-like toxin genes] MLST(P)
B.cereus 3L4Dairy products, milk products (2016)China, Shaanxi ProvinceMLST(P)
B.c_group FSLK6-0268Dairy products, milk products (2012)USAMLST(P)
B.c_group KW63[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.cereus B06_005Human, woundFranceMLST(TH)
B.thuringiensis 169-S-16Plant, leaves of clover (Trifolium hybridum) (2004)UKMLST(P)
B.thuringiensis IBL3090Soil (1983) [bears Photorhabdus/Yersinia-like toxin genes]USA, New YorkMLST(P)
B.c_group KW27[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.thuringiensis BGSC4M2 UK, EnglandMLST(P)
B.thuringiensis T10017Soil (1982)USAMLST(P)
B.thuringiensis T08009#1(1979) [sequences conflicting with isolate T08009#2]USAMLST(P)
B.c_group KW55[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.c_group FSLW7-1101Dairy products, milk products (2010)USAMLST(P)
B.thuringiensis T08031Other, lake sediments (1991)BrazilMLST(P)
B.thuringiensis 127-S-3Plant, leaves of clover (Trifolium hybridum) (2004)UKMLST(P)
B.c_group 295171Human, bloodUKMLST(TH)
B.cereus BC_14Food, egg product (2006)Italy (Southern)MLST(P)
B.thuringiensis T10001(1967)GermanyMLST(P)
B.c_group FSLW7-1334Human, faeces/stools (2011)USAMLST(P)
B.c_group BGSC4Q4[Wild type isolate] MLST(P)
B.thuringiensis IBL747Soil (1983) [bears Photorhabdus/Yersinia-like toxin genes]USA, New YorkMLST(P)
B.thuringiensis IBL275Soil (1983) [bears Photorhabdus/Yersinia-like toxin genes]USA, WyomingMLST(P)
B.thuringiensis IBL3476SoilUSA, MarylandMLST(P)
B.thuringiensis 286-S-6Plant, leaves of clover (Trifolium hybridum) (2004)UKMLST(P)
B.thuringiensis T15001Soil (1983)USA, North DakotaMLST(P)
B.cereus HF31Food (2015)Germany, BerlinMLST(P)
B.thuringiensis 158-S-3Plant, leaves of clover (Trifolium hybridum) (2004)UKMLST(P)
B.thuringiensis HD520Animal, Insect, House mosquito (Culex pipiens) larvae AFLP2
B.thuringiensis HD776  AFLP2
B.thuringiensis HD265Animal, Insect, Lesser Wax moth (Achroia grisella)UK, EnglandAFLP2
B.thuringiensis HD775  AFLP2
B.thuringiensis HD597Other, silkworm farmJapanAFLP2
B.thuringiensis INRALM1523ASoil from an island AFLP3
B.thuringiensis HD266  AFLP2
B.thuringiensis INRALM1573Soil from an island AFLP3
B.thuringiensis HD115  AFLP2


22 isolate(s) sharing typing data in supercluster 23

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.c_group WSBC10311[B.cereus or B.weihenstephanensis]Germany, WeihenstephanAFLP3 MLST(TH, H, K, CS, P)
B.wiedmannii AFS054563Plant, Corn leaf (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.wiedmannii AFS064159Plant, Weed leaf (2014)USA, OhioMLST(TH, H, K, CS, P)
B.wiedmannii AFS057498Plant, Weed plant (2014)USA, IndianaMLST(TH, H, K, CS, P)
B.wiedmannii AFS071466Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.c_group BAG6X1-1SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.wiedmannii AFS028955Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.wiedmannii AFS026476(2014)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS090430Plant, Corn grainbin dust (2013)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS078926Plant, Soybean core (2014)USA, IowaMLST(TH, K, CS, P, ftsa, recf, succ)
B.wiedmannii AFS063338Soil (2014)USA, IowaMLST(TH, K, CS, P, pyre, recf, succ)
B.wiedmannii AFS064408Other, excrement (2014)USA, IowaMLST(TH, H, CS, P, gyrb, mbl, mdh, pyca1, rpob)
B.cereus FSLM8-0091Dairy products, raw milk (2012)USAMLST(TH, H, K, P, clpc, dinb, purf, yhfl)
B.wiedmannii AFS072284Plant, Soybean leaf (2014)USA, IllinoisMLST(TH, K, CS, ftsa, gmk, purh, pyre, recf, tpi)
B.wiedmannii AFS056359Plant, Weed plant (2014)USA, IndianaMLST(TH, H, P, dinb, gdpd, gyrb, mbl, mdh, muts, purf, pyca1, yhfl)
B.wiedmannii AFS002707Plant, Soybean leaf (2014)USA, IllinoisMLST(K, CS, P, adk, ftsa, glpt, recf, succ)
B.thuringiensis GOE6#1Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(CS, P, ccpa, ftsa, glpt, gyrb, mdh, muts, pyca1, pyre, recf, rpob, succ)
B.c_group BAG2X1-2SoilUSA, Massachusetts, BostonMLST(K, CS, adk, ccpa, ftsa, glpf, glpt, gmk, ilvd, pta, purh, recf, tpi)
B.c_group PL24Soil MLST(P)
B.c_group PL16Soil MLST(P)
B.thuringiensis PLBB18/1Soil (2012)PolandMLST(P)
B.cereus INRABSFood, raw zucchini AFLP3


25 isolate(s) sharing typing data in supercluster 24

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.thuringiensis IBL3708Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3712Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3761Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3759Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3713Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3690Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3688Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3731Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3692Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3700Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3726Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3715Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3801Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3691Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3724Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3716Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3686Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3684Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3802Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3694Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3717Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3709Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3728Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3714Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3687Soil (2009)USA, MarylandMLST(P)


26 isolate(s) sharing typing data in supercluster 25

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.wiedmannii AFS056211Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS052086Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS075437Other, excrement (2014)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS024711Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.wiedmannii AFS025735Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.wiedmannii AFS036771Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.wiedmannii AFS021943Plant, Soybean leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS027918Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS002508Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS067814Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.wiedmannii AFS030115Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS008930Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.wiedmannii AFS061181Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS086460Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.wiedmannii AFS089520Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.wiedmannii AFS024024Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, gmk, ilvd, purh)
B.wiedmannii AFS078153Animal, earthworm (2013)USA, MinnesotaMLST(H, K, P, clpc, dinb, gdpd, purf, yhfl)
B.wiedmannii AFS005864Plant, Corn (2014)USA, MinnesotaMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.wiedmannii AFS042581Animal, earthworm (2013)USA, MinnesotaMLST(H, K, CS, glpf, gmk, ilvd, pta, purh, tpi)
B.wiedmannii AFS015207Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, P, clpc, dinb, purf, yhfl)
B.wiedmannii AFS032503Soil (2014)USA, New YorkMLST(TH, K, CS, P, ftsa, pyre, recf)
B.wiedmannii AFS070572Plant, Soybean root (2014)USA, IowaMLST(TH, H, K, CS, gmk, ilvd, purh)
B.wiedmannii AFS038776Animal, earthworm (2013)USA, MinnesotaMLST(H, K, clpc, dinb, gdpd, glpf, gmk, ilvd, pta, purf, purh, pyca2, yhfl)
B.wiedmannii AFS089424Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, clpc, dinb, ilvd, purf, purh, yhfl)
B.wiedmannii AFS053236Plant, Corn root (2014)USA, IowaMLST(K, adk, clpc, dinb, ftsa, gdpd, glpf, glpt, gmk, ilvd, purf, purh, pyca2, pyre, recf, succ, tpi, yhfl)
B.c_group AR14-5Soil (2012)ArgentinaMLST(P)


64 isolate(s) sharing typing data in supercluster 26

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.thuringiensis T01001Animal, Insect, Mediterranean flour moth/mill moth (Ephestia kuhniella/Anagasta kuehniella) (1958)CanadaMLST(TH, H, K, CS, P)
B.thuringiensis AFS097514Plant, Soybean leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS073530Plant, Soybean leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS030961Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4A3Animal, Insect, silkworm (Bombyx mori) (2013)UKMLST(TH, H, K, CS, P)
B.thuringiensis AFS098336Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS057829Plant, Wheat plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis ATCC10792#3Animal, Insect, Mediterranean flour moth/mill moth (Ephestia kuhniella/Anagasta kuehniella) [three complete genomes sequenced for this strain with different sequences and origins; strain sequenced by Biological Defense Research Directorate (BDRD), Rockville, Maryland, USA; sequences conflicting with isolates ATCC10792#1 and ATCC10792#2]IsraelMLST(TH, H, K, CS, P)
B.thuringiensis NA205-3Other, dust from maize siloSpainMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4A4Animal, Insect, tobacco moth/cacao moth/warehouse moth (Ephestia elutella)UK, EnglandMLST(TH, H, K, CS, P)
B.thuringiensis IS5056Soil (2005)Poland, Biebrza National ParkMLST(TH, H, K, CS, P)
B.thuringiensis AFS040438Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis CT-43 ChinaMLST(TH, H, K, CS, P)
B.thuringiensis T01328Soil (1994)Brazil, Sao Paulo, Cubatao countyMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4BP1Soil, sesame fieldKorea (South)MLST(TH, H, K, CS, P)
B.thuringiensis BGSC4BN1Food, beansChinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS052794Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.thuringiensis AFS047495Plant, Corn (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS082247Plant, Corn leaf (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS039774Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS010823Plant, Soybean leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS081620Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS077661Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS094706(2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis Bt407[Pasteur Institute; well studied isolate that has been cured of the plasmid that encodes the insecticidal crystal toxin; three complete genomes sequenced for this strain with identical MLST sequences]France, ParisMLST(TH, H, K, CS, P)
B.thuringiensis AFS052676Plant, Soybean leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS099505Plant, Soybean core (2014)USA, IowaMLST(H, K, P, clpc, dinb, gdpd, purf, yhfl)
B.thuringiensis AFS038158Plant, Soybean root (2013)USA, MinnesotaMLST(TH, H, CS, P, gyrb, mbl, mdh, muts, rpob)
B.thuringiensis AFS057784Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, gmk, ilvd, purh)
B.thuringiensis AFS060060Plant, Soybean core (2014)USA, IowaMLST(TH, H, CS, gmk, gyrb, mdh, muts, purh, pyca1, rpob, tpi)
B.thuringiensis ATCC10792#2Animal tissue (1946) [three complete genomes sequenced for this strain with different sequences and origins; strain sequenced by School of Applied Biosciences, Kyungpook National University, Daegu, South Korea; sequences conflicting with isolates ATCC10792#1 and ATCC10792#3]USAMLST(TH, K, P, clpc, dinb, ftsa, gdpd, purf, recf, succ)
B.thuringiensis AFS099341Plant, Corn leaf (2014)USA, IllinoisMLST(H, K, CS, glpf, gmk, purh, pyca2, tpi)
B.thuringiensis AFS007186Plant, Corn leaf (2014)USA, IllinoisMLST(H, K, CS, glpf, gmk, ilvd, purh, pyca2)
B.thuringiensis ATCC10792#1[three complete genomes sequenced for this strain with different sequences and origins; strain sequenced by Department of Food Science and Biotechnology College of Biotechnology and Bioscience, Kangwon National University, Chunchon, South Korea; sequences conflicting with isolates ATCC10792#2 and ATCC10792#3] MLST(P, ccpa, dinb, ftsa, gdpd, glpt, gyrb, mbl, mdh, muts, panc, purf, pyca1, pyre, recf, succ, yhfl)
B.thuringiensis AFS098506Plant, Corn root (2014)USA, IowaMLST(K, CS, adk, ftsa, glpf, glpt, gmk, ilvd, pta, pyca2, recf, succ, tpi)
B.thuringiensis AFS011848Plant, Soybean core (2014)USA, IowaMLST(TH, H, clpc, gdpd, gmk, gyrb, ilvd, mbl, mdh, muts, rpob, tpi, yhfl)
B.thuringiensis AFS058254Plant, Soybean leaf (2014)USA, MinnesotaMLST(K, P, clpc, ftsa, glpt, panc, purf, pyre, recf, succ, yhfl)
B.thuringiensis AFS001991Plant, Corn leaf (2014)USA, IllinoisMLST(TH, H, CS, gyrb, mbl, mdh, purh, rpob)
B.thuringiensis T01058(1964)SwitzerlandMLST(P)
B.thuringiensis BGSC4A2[Wild type isolate] MLST(P)
B.thuringiensis BGSC4A1#2(1915) [Wild type isolate; sequences conflicting with isolate BGSC4A1#1] MLST(P)
B.thuringiensis T01015(1962)BulgariaMLST(P)
B.thuringiensis BGSC4D3[Wild type isolate] MLST(P)
B.thuringiensis BGSC4A8  MLST(P)
B.thuringiensis BGSC4A6[Wild type isolate] MLST(P)
B.thuringiensis BGSC4A1#1(1915) [Wild type isolate; sequences conflicting with isolate BGSC4A1#2] MLST(P)
B.thuringiensis IBL425Soil (1983)USA, New YorkMLST(P)
B.thuringiensis T01022Animal, earthworm/redworm (Eisenia foetida) (1964)USAMLST(P)
B.thuringiensis BGSC4A7[acrystalliferous] MLST(P)
B.c_group DVM_30SoilJapanMLST(P)
B.thuringiensis T01326Soil (1994)ChileMLST(P)
B.c_group KW33[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.thuringiensis BGSC4A5 CzechoslovakiaMLST(P)
B.thuringiensis KBBF3Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBB7Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBB5Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBB8Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBF4Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBB6Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBF2Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBF6Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBE5Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBB4Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBF1Soil, Forest soil (2000)France, VersaillesMLST(CS)


6 isolate(s) sharing typing data in supercluster 27

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.cereus MB.22Food (2014)Germany, MunichMLST(TH, H, K, CS, P)
B.cereus MOD1Bc97Other, Oxytetracycline Medicated Fish Feed (2006)USA, MarylandMLST(TH, H, K, P, clpc, dinb, purf, yhfl)
B.cereus AFS061996(2014)USA, North CarolinaMLST(TH, K, P, clpc, dinb, gdpd, purf)
B.cereus NVH0246/02Food, shrimps (2002) [originally proposed as B.anthracis]ThailandMLST(H)
B.c_group TE7-9Soil (2011)KenyaMLST(P)
B.cereus F5191Human, lung tissue (1983) [from the same patient biopsy as isolate F5190]USA, CaliforniaMLST(P)


39 isolate(s) sharing typing data in supercluster 28

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.thuringiensis IBL3755Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3746Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3745Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3756Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3772Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3758Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3739Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3765Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3762Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3769Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3741Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3718Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3733Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3773Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3735Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3736Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3744Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3768Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3786Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3787Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3775Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3753Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3748Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3774Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3743Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3732Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3784Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3749Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3754Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3734Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3737Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3740Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3764Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3767Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3770Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3752Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3771Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3730Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3750Soil (2009)USA, MarylandMLST(P)


19 isolate(s) sharing typing data in supercluster 29

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.cereus MOD1Bc187Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc177Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc213Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc55Plant, Sesame Seed (2015)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc212Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc210Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus SJ-S2HumanUSA, Tennessee, MemphisMLST(TH, H, K, CS, P)
B.cereus MOD1Bc201Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus AFS099758Plant, Corn (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus MOD1Bc190Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc136Food, Dietary Supplements (2015)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus SJ-S24HumanUSA, Tennessee, MemphisMLST(TH, H, K, CS, P)
B.cereus MOD1Bc184Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc64Other, Baby Wipes (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus 16-00191  MLST(TH, H, K, P, clpc, dinb, gdpd, purf)
B.cereus FRI35  MLST(TH, K, CS, P, ftsa, pyre, succ)
B.cereus 143298.BHuman, wound infection (2004)UK, ScotlandMLST(P)
B.cereus FJ15BC328Dairy products, milk products (2015)China, Fujian ProvinceMLST(P)
B.cereus H1548Human, blood (2000) [human septicaemia, fatal]USA, North CarolinaMLST(P)


2 isolate(s) sharing typing data in supercluster 30

Click here to save the colored tree file or here for the uncolored tree.

Click here to save the table as a tab-delimited text file.

StrainSourceLocationShared Typing Data
B.wiedmannii AFS001911Plant, core (2014)USA, North CarolinaMLST(H, K, CS, gmk, ilvd, pta, pyca2, tpi)
B.wiedmannii AFS057349Plant, core (2014)USA, North CarolinaMLST(H, K, CS, gmk, ilvd, pta, pyca2, tpi)


3 isolate(s) sharing typing data in supercluster 31

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.c_group A3i1Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group A3i3Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group PL17Soil MLST(P)


2 isolate(s) sharing typing data in supercluster 32

Click here to save the colored tree file or here for the uncolored tree.

Click here to save the table as a tab-delimited text file.

StrainSourceLocationShared Typing Data
B.cereus F3920Human, lung (1982) [human pneumonia]USA, South DakotaMLST(P)
B.cereus G1440Human, lung (1988) [human pneumonia]USA, LouisianaMLST(P)


2 isolate(s) sharing typing data in supercluster 33

Click here to save the colored tree file or here for the uncolored tree.

Click here to save the table as a tab-delimited text file.

StrainSourceLocationShared Typing Data
B.thuringiensis Bt194 BrazilMLST(P)
B.thuringiensis LFB862Food, black pepper (1994)BrazilMLST(P)


3 isolate(s) sharing typing data in supercluster 34

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.c_group A4i4Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group A4s3Soil (2002)UK, England, BerkshireMLST(P)
B.c_group A3o5Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)


10 isolate(s) sharing typing data in supercluster 35

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.thuringiensis IBL3705Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3704Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3697Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3706Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3698Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3707Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3695Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3699Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3696Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3702Soil (2009)USA, MarylandMLST(P)


4 isolate(s) sharing typing data in supercluster 36

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.thuringiensis BGSC4CC1Soil, grain fieldPakistanMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4CE1SoilAzoresMLST(TH, H, K, CS, P)
B.thuringiensis CEB02/079[Pasteur Institute]France, ParisMLST(H)
B.cereus BGSC6A7#2Other, purified from commercial probiotic BIOSUBTYL DALAT, manufactured in Vietnam [sequences conflicting with isolate BGSC6A7#1] MLST(P)


66 isolate(s) sharing typing data in supercluster 37

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.thuringiensis AFS099677Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS094922Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS076772Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS076861Plant, tree leaf (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS097917Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4AO1(1989)JapanMLST(TH, H, K, CS, P)
B.thuringiensis AFS034818Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS036383Plant, Soybean leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS034600Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS088016Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS081470Plant, Weed plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS056280Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS005140Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS030866Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS065666Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.thuringiensis AFS096960Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS058532Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS045876Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS098170Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS018617Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.thuringiensis AFS058843Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS097325Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS040392Plant, Grass leaf (2013)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS006334Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis IBL200Human, healthy human hand (1985) [israelensis-like serovar; bears Photorhabdus/Yersinia-like toxin genes]USA, MarylandMLST(TH, H, K, CS, P)
B.thuringiensis AFS059039Soil (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS020602Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.thuringiensis AFS024266Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS067808Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4N1Animal, Insect, Greater Wax Moth/Honeycomb Moth (Galleria mellonella)UK, EnglandMLST(TH, H, K, CS, P)
B.thuringiensis AFS025510Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.thuringiensis AFS013213Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.thuringiensis AFS060054Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS011659Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.thuringiensis AFS022086Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.thuringiensis AFS031814Soil (2014)USA, New YorkMLST(TH, H, CS, P, mbl, mdh, muts, pyca1, rpob)
B.thuringiensis AFS041525Plant, core (2014)USA, North CarolinaMLST(TH, K, CS, P, ftsa, pyre, succ)
B.thuringiensis AFS055708Plant, core (2014)USA, North CarolinaMLST(TH, H, K, P, clpc, dinb, gdpd, purf)
B.thuringiensis BGSC4AP1(1989)JapanMLST(TH, H, K, P, clpc, gdpd, purf, yhfl)
B.thuringiensis AFS085829Plant, core (2014)USA, North CarolinaMLST(TH, H, CS, P, mbl, mdh, muts, pyca1, rpob)
B.thuringiensis AFS012085Plant, Corn root (2014)USA, IowaMLST(TH, H, CS, P, gyrb, mbl, mdh, muts, pyca1)
B.thuringiensis AFS086961Soil (2014)USA, New YorkMLST(TH, K, CS, P, ftsa, pyre, succ)
B.cereus FSLK6-0040Dairy products, Laboratory Heat Treated Raw Milk (2012)USA, New YorkMLST(K, CS, P, ccpa, ftsa, glpt, pyre, recf, succ)
B.thuringiensis AFS085496Plant, core (2014)USA, North CarolinaMLST(TH, K, CS, P, ftsa, pyre, recf)
B.thuringiensis AFS006923Soil (2014)USA, North CarolinaMLST(TH, H, K, P, clpc, dinb, gdpd, yhfl)
B.thuringiensis AFS066175Plant, core (2014)USA, North CarolinaMLST(TH, H, K, P, clpc, dinb, gdpd, yhfl)
B.thuringiensis AFS034546Plant, Soybean root (2014)USA, MinnesotaMLST(K, CS, P, adk, ftsa, pyre, recf, succ)
B.thuringiensis AFS036336Plant, core (2014)USA, North CarolinaMLST(K, CS, adk, ccpa, ftsa, glpt, gmk, ilvd, pta, purh, pyca2, pyre, recf, tpi)
B.thuringiensis AFS085011Plant, core (2014)USA, North CarolinaMLST(TH, H, CS, gmk, gyrb, mbl, mdh, purh, pyca1, rpob, tpi)
B.thuringiensis AFS019518Plant, Soybean core (2014)USA, IowaMLST(CS, P, ccpa, ftsa, glpt, gyrb, muts, pyca1, pyre, recf, rpob, succ)
B.thuringiensis AFS057244Soil (2014)USA, New YorkMLST(K, CS, adk, ccpa, ftsa, pta, purh, pyca2, pyre, recf, succ, tpi)
B.thuringiensis IBL1115Soil (1986) [bears Photorhabdus/Yersinia-like toxin genes]IcelandMLST(P)
B.thuringiensis IBL90Soil (1987) [bears Photorhabdus/Yersinia-like toxin genes]USA, WyomingMLST(P)
B.thuringiensis IBL26Soil (1987) [bears Photorhabdus/Yersinia-like toxin genes]USA, WisconsinMLST(P)
B.thuringiensis IBL950Soil (1983) [bears Photorhabdus/Yersinia-like toxin genes]USA, North CarolinaMLST(P)
B.thuringiensis IBL1140Soil (1986) [bears Photorhabdus/Yersinia-like toxin genes]NorwayMLST(P)
B.thuringiensis IBL3790Soil (2009)USA, MarylandMLST(P)
B.c_group KW10[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.thuringiensis IBL888Soil (1986) [bears Photorhabdus/Yersinia-like toxin genes]IcelandMLST(P)
B.thuringiensis IBL110Soil (1983) [bears Photorhabdus/Yersinia-like toxin genes]USA, New YorkMLST(P)
B.thuringiensis IBL3788Soil (2009)USA, MarylandMLST(P)
B.c_group KW37[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.thuringiensis K14_5790(2014)Korea (South)MLST(P)
B.thuringiensis IBL54Soil (1987) [bears Photorhabdus/Yersinia-like toxin genes]USA, MontanaMLST(P)
B.thuringiensis IBL3789Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL61Soil (1987) [bears Photorhabdus/Yersinia-like toxin genes]USA, MontanaMLST(P)


18 isolate(s) sharing typing data in supercluster 38

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.weihenstephanensis GOE7#2Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(TH, H, K, CS, P)
B.weihenstephanensis GOE13Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(TH, H, K, CS, P)
B.weihenstephanensis GOE1#2Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(TH, H, K, CS, P)
B.weihenstephanensis GOE6#2Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(TH, H, K, CS, P)
B.weihenstephanensis GOE3#2Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(TH, H, K, CS, P)
B.weihenstephanensis GOE11Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(TH, H, K, CS, P)
B.weihenstephanensis ADRIAI21(1991)FranceMLST(TH, H, K, CS, P)
B.weihenstephanensis GOE4#2Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(TH, H, K, CS, P)
B.weihenstephanensis GOE12Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(TH, H, K, CS, P)
B.weihenstephanensis GOE5#2Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(TH, H, K, CS, P)
B.weihenstephanensis GOE2#2Soil or plant, tomato (Solanum lycopersicum) rhizosphere (2014)Germany, GoettingenMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.c_group BAG6O-2SoilUSA, Massachusetts, BostonMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.c_group E5i2Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group D10-15.B.iSoil (2006)UKMLST(P)
B.thuringiensis PLBB29/2Soil (2012)PolandMLST(P)
B.c_group A4g4Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group E2i5Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.cereus KBCH8Soil, Forest soil (2000)France, VersaillesMLST(CS)


5 isolate(s) sharing typing data in supercluster 39

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.pseudomycoides AFS070925Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.pseudomycoides AFS018356Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.pseudomycoides AFS009013Plant, Corn leaf (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.pseudomycoides AFS099456Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.pseudomycoides AFS040159Plant, Soybean root (2014)USA, MissouriMLST(TH, K, CS, ftsa, gmk, ilvd, recf, succ, tpi)


2 isolate(s) sharing typing data in supercluster 40

Click here to save the colored tree file or here for the uncolored tree.

Click here to save the table as a tab-delimited text file.

StrainSourceLocationShared Typing Data
B.thuringiensis HD800  AFLP2
B.thuringiensis HD552  AFLP2


6 isolate(s) sharing typing data in supercluster 41

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.cereus LCT-BC235Other, culture sent to space aboard the Shenzhou-8 spacecraft; isolated after space flight MLST(TH, H, K, CS, P)
B.cereus LCT-BC25Other, culture sent to space aboard the Shenzhou-8 spacecraft; isolated after space flight MLST(TH, H, K, CS, P)
B.cereus LCT-BC244  MLST(TH, H, K, CS, P)
B.cereus TS2Other, Saltern sediment (2014)India, Tamil Nadu, Tuticorin (Thoothukudi)MLST(H, K, P, clpc, dinb, gdpd, purf)
B.cereus MOD1Bc107Other, Oxytetracycline Medicated Fish Feed (2006)USA, MarylandMLST(K, adk, ccpa, clpc, dinb, ftsa, gdpd, gmk, purh, pyca2, recf)
B.cereus 2013-10Dairy products, milk productsChinaMLST(P)


44 isolate(s) sharing typing data in supercluster 42

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.cereus 13061  MLST(TH, H, K, CS, P)
B.cereus WSBC10035Dairy products, pasteurized milk (1993)GermanyMLST(TH, H, K, CS, P)
B.cereus MHI86Food, infant foodGermanyMLST(TH, H, K, CS, P)
B.cereus MOD1Bc138Food, Dietary Supplements (2015)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc224Food, food product (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus B4086Food, boiled rice (2012)NetherlandsMLST(TH, H, K, CS, P)
B.cereus RIVMBC90Human, faeces/stools (1999) [diarrheal food poisoning outbreak]NetherlandsAFLP3 MLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.c_group AND1407Food MLST(TH, H, K, CS, P)
B.cereus MB.1Food (2014)Germany, MunichMLST(TH, H, K, CS, P)
B.cereus MOD1Bc67Other, Powdered Infant Formula (2015)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus F4429/71Food, vanilla pudding (1971) [diarrheal food poisoning outbreak]NetherlandsMLST(TH, H, K, CS, P)
B.cereus MOD1Bc105Other, Oxytetracycline Medicated Fish Feed (2006)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc140Food, Dietary Supplements (2015)USA, MarylandMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4H1Animal, Insect, Prominent moth (Notodonta aniera)Czechoslovakia or USSRMLST(TH, H, K, CS, P)
B.cereus MOD1Bc99Other, Oxytetracycline Medicated Fish Feed (2006)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc119Food, Whole Black Pepper (2015)USA, MarylandMLST(TH, H, K, CS, gmk, ilvd, purh)
B.cereus MB.17Food (2014)Germany, MunichMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.cereus FSLW8-0003Dairy products, Ricotta/mozzarella whey (2012)USA, New YorkMLST(H, K, P, clpc, dinb, gdpd, purf, yhfl)
B.cereus MOD1Bc113Other, Powdered Infant Formula (2015)USA, MarylandMLST(TH, H, K, P, dinb, gdpd, purf, yhfl)
B.c_group MSX-D12  MLST(H, K, CS, gmk, ilvd, pta, purh, pyca2, tpi)
B.cereus AFS076904Plant, Corn root (2013)USA, IowaMLST(TH, P, clpc, dinb, gdpd, gyrb, mdh, muts, purf, pyca1, recf, rpob, succ)
B.cereus H3081.97Food (1997) [emetic toxin/cereulide producer; from the same food poisoning outbreak as isolates H3074.97 and H3076.97; outbreak linked to rice]USA, TexasMLST(P, ccpa, clpc, dinb, ftsa, glpt, gyrb, mbl, mdh, muts, panc, purf, pyca1, pyre, recf, yhfl)
B.cereus CC-1Other, marine sediments (2015)China, Bo Hai, Liaodong Bay, PanjinMLST(CS, adk, ccpa, ftsa, gmk, pta, purh, pyca1, pyca2, pyre, rpob, succ)
B.cereus EGD-AQ9Other, sewage (2016)India, Maharashtra, NagpurMLST(H, gmk, gyrb, ilvd, mdh, pta, purh, pyca1, pyca2, rpob, yhfl)
B.c_group AH840[sequences conflicting with isolate T01001] MLST(TH, H)
B.cereus B06_007Human, cutaneousNorwayMLST(TH)
B.cereus F00/3086Human, neutropenia in child; Public Health Laboratory (2000)UK, England, ChelmsfordMLST(P)
B.cereus BFDA96178Food (2007)Taiwan, Taoyuan countyMLST(P)
B.thuringiensis BGSC4I3 USAMLST(P)
B.cereus NC1276Food, rice (1997) [emetic toxin/cereulide producer]IndiaMLST(P)
B.cereus NC113Other, environmental (1983) [emetic toxin/cereulide producer]JapanMLST(P)
B.cereus B06_003Human, bloodNorwayMLST(TH)
B.cereus NC526Other, environmental (1983) [emetic toxin/cereulide producer]JapanMLST(P)
B.cereus NC610Other, environmental (1990) [emetic toxin/cereulide producer]JapanMLST(P)
B.cereus H3076.97Human, faeces/stools (1997) [emetic toxin/cereulide producer; from the same food poisoning outbreak as isolates H3074.97 and H3081.97; outbreak linked to rice]USA, TexasMLST(P)
B.cereus BC_28Food, ready-to-eat product (2006)Italy (Northwestern)MLST(P)
B.cereus B33  MLST(P)
B.cereus NC111Food, rice (1983) [emetic toxin/cereulide producer]JapanMLST(P)
B.cereus NC1274Human, vomit (1997) [human vomiting, emetic toxin/cereulide producer]IndiaMLST(P)
B.cereus NC-stdFood, rice [emetic toxin/cereulide producer]UKMLST(P)
B.c_group AH1124HumanFranceMLST(TH)
B.cereus HZ12-67Dairy products, milk products (2012)ChinaMLST(P)
B.c_group KW2[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.cereus INRAC24Food, chilled pasteurized carrot (4 degrees C.) (1996)France, VaucluseAFLP3


24 isolate(s) sharing typing data in supercluster 43

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.cereus BDRD-ST24[Biological Defense Research Directorate (BDRD)]USA, Maryland, RockvilleMLST(TH, H, K, CS, P)
B.cereus M13Food, Korean fermented food (2016)Korea (South)MLST(TH, H, K, CS, P)
B.cereus 16-00187  MLST(TH, H, K, CS, P)
B.cereus FSLW8-0824Food, Finished RTE food product (2012)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus 16-00188  MLST(H, K, CS, glpf, gmk, ilvd, purh, pyca2, tpi)
B.cereus SJ-S28HumanUSA, Tennessee, MemphisMLST(K, CS, ccpa, ftsa, glpf, glpt, gmk, pta, purh, pyca2, pyre, recf, succ, tpi)
B.cereus MOD1Bc219Other, Baby Wipes (2016)USA, MarylandMLST(H, CS, glpf, gmk, gyrb, ilvd, mdh, muts, purh, pyca1, pyca2, rpob, tpi)
B.cereus WSBC10028Dairy products, pasteurized milk (1993) [from the same dairy as isolates WSBC10029, WSBC10030, WSBC10031, WSBC10042, WSBC10201, WSBC10204, WSBC10205, WSBC10206, WSBC10208, and WSBC10211]Germany, WeihenstephanMLST(H, P)
B.cereus ATCC12480Animal, sheep rumen MLST(P, mbl, mdh, muts, pyca1, rpob)
B.cereus BC_8Food, egg product (2006)Italy (Southern)MLST(P)
B.cereus NC1272Food, pasta (1993) [human diarrhea]SwitzerlandMLST(P)
B.cereus F4976Human, lung (1983) [human pneumonia]USA, OregonMLST(P)
B.cereus BC_27Food, ready-to-eat product (2006)Italy (Northwestern)MLST(P)
B.cereus Cal3Other, board machine (1998)FinlandMLST(P)
B.cereus NCIB6349(1950) MLST(P)
B.cereus NC1216Dairy products, milk products (1996)JapanMLST(P)
B.cereus BC_37Dairy products, industrial dairy products (2006)Italy (Northeastern)MLST(P)
B.cereus De1Human, blood (2001)ItalyMLST(P)
B.cereus NC478Food (1983)JapanMLST(P)
B.cereus BC_4Food, egg product (2006)Italy (Southern)MLST(P)
B.cereus FP17Food, pasta (2002)ItalyMLST(P)
B.cereus NC392Human, faeces/stools (1982)JapanMLST(P)
B.cereus NC383Human, faeces/stools (1982)JapanMLST(P)
B.cereus NC545Food, rice (1983)JapanMLST(P)


18 isolate(s) sharing typing data in supercluster 44

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.thuringiensis T02001Animal, Insect, forest tent caterpillar moth (Malacosoma disstria) (1958) [two complete genomes sequenced for this strain with identical MLST sequences]USAMLST(TH, H, K, CS, P)
B.thuringiensis YBT-020  MLST(TH, H, K, CS, ilvd, purh, tpi)
B.thuringiensis NCTC4041  MLST(P)
B.thuringiensis BGSC4D2[Wild type isolate] MLST(P)
B.thuringiensis IBL480Soil (1986)SwedenMLST(P)
B.thuringiensis IBL523Soil (1987)USA, CaliforniaMLST(P)
B.thuringiensis IBL3268Soil (1984)NepalMLST(P)
B.thuringiensis IBL535Soil (1988)USA, MarylandMLST(P)
B.thuringiensis IBL3870Soil (1983)USA, WyomingMLST(P)
B.thuringiensis IBL1211Other, snow (1985)USA, MarylandMLST(P)
B.thuringiensis BGSC4B5  MLST(P)
B.thuringiensis IBL1132Soil (1986)NorwayMLST(P)
B.thuringiensis IBL1613Soil (1985)SpainMLST(P)
B.thuringiensis IBL674Soil (1984)IndiaMLST(P)
B.thuringiensis BGSC4B1[Wild type isolate] MLST(P)
B.thuringiensis IBL1489Soil (1985)SpainMLST(P)
B.thuringiensis IBL2408Soil (1985)SpainMLST(P)
B.thuringiensis IBL631Soil (1985)MoroccoMLST(P)


15 isolate(s) sharing typing data in supercluster 45

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.cereus 2000032803Soil (1963) MLST(P)
B.cereus 2002013139  MLST(P)
B.cereus 2002013140  MLST(P)
B.cereus 2002013138  MLST(P)
B.cereus 2002013145  MLST(P)
B.cereus 2002013146  MLST(P)
B.cereus 2000032950  MLST(P)
B.cereus 2000032884  MLST(P)
B.cereus 2000032847  MLST(P)
B.cereus 2000032849  MLST(P)
B.cereus 2000031061  MLST(P)
B.cereus 2000032947  MLST(P)
B.cereus 2000032928  MLST(P)
B.cereus 2000032805  MLST(P)
B.cereus 2000031062  MLST(P)


2 isolate(s) sharing typing data in supercluster 46

Click here to save the colored tree file or here for the uncolored tree.

Click here to save the table as a tab-delimited text file.

StrainSourceLocationShared Typing Data
B.c_group PL28Soil MLST(P)
B.c_group A3s10Soil (2002)UK, England, BerkshireMLST(P)


120 isolate(s) sharing typing data in supercluster 47

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.cereus F4810/72Human, vomit (1972) [emetic food poisoning outbreak; human vomiting; reference emetic toxin/cereulide producer]UKAFLP2 AFLP3 MLST(TH, H, K, CS, P)
B.cereus NC7401Human, faeces/stools or vomit (1974 or 1994) [human vomiting, emetic food poisoning outbreak, emetic toxin/cereulide producer]JapanAFLP3 MLST(TH, H, K, CS, P)
B.cereus F1-15  MLST(TH, H, K, CS, P)
B.cereus MB.15Food (2014)Germany, MunichMLST(TH, H, K, CS, P)
B.cereus MOD1Bc234Human, faeces/stools (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus HZBCE-09Food, pork (2015)China, HangzhouMLST(TH, H, K, CS, P)
B.cereus MOD1Bc225Human, faeces/stools (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus 16-00174  MLST(TH, H, K, CS, P)
B.cereus 16-00176  MLST(TH, H, K, CS, P)
B.c_group IS075Animal, MammalsPolandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc220Food, food product (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus 16-00183  MLST(TH, H, K, CS, P)
B.cereus HZBCE-01Human, stomach (2015)China, HangzhouMLST(TH, H, K, CS, P)
B.cereus MB.8Food (2014)Germany, MunichMLST(TH, H, K, CS, P)
B.c_group IS845/00Animal, MammalsPolandMLST(TH, H, K, CS, P)
B.c_group MSX-A12  MLST(TH, H, K, CS, P)
B.cereus HZBCE-10Food, pork (2015)China, HangzhouMLST(TH, H, K, CS, P)
B.cereus HZBCE-08Food, Fried fish (2015)China, HangzhouMLST(TH, H, K, CS, P)
B.cereus MB.21Food (2014)Germany, MunichMLST(TH, H, K, CS, P)
B.cereus HZBCE-02Human, stomach (2015)China, HangzhouMLST(TH, H, K, CS, P)
B.cereus BDRD-ST26[Biological Defense Research Directorate (BDRD)]USA, Maryland, RockvilleMLST(TH, H, K, CS, P)
B.cereus B4153Dairy products, milk, (fermented) dairy products and desserts (2012)NetherlandsMLST(TH, H, K, CS, P)
B.cereus B4116Food (2013)NetherlandsMLST(TH, H, K, CS, P)
B.cereus HZBCE-07Food, Fried fish (2015)China, HangzhouMLST(TH, H, K, CS, P)
B.cereus MOD1Bc233Human, faeces/stools (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MB.16Food (2014)Germany, MunichMLST(TH, H, K, CS, P)
B.cereus SJ-S30HumanUSA, Tennessee, MemphisMLST(TH, H, K, CS, P)
B.cereus B4085Food (2013)NetherlandsMLST(TH, H, K, CS, P)
B.cereus NVH0075/95Food, stew with vegetables, food poisoning (1995) (1995) [diarrheal food poisoning outbreak]NorwayMLST(TH, H, K, CS, P)
B.c_group IS195Animal, MammalsPolandMLST(TH, H, K, CS, P)
B.cereus BCE-01Human, stomach (2015)China, HangzhouMLST(TH, H, K, CS, P)
B.cereus B4078(2012)NetherlandsMLST(TH, H, K, P, clpc, dinb, purf, yhfl)
B.cereus MB.20Food (2014)Germany, MunichMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.cereus UBA5641  MLST(H, K, CS, gmk, ilvd, pta, purh, pyca2, tpi)
B.cereus MB.8-1Food (2014)Germany, MunichMLST(TH, H, K, P, clpc, dinb, purf, yhfl)
B.c_group AH817Human, periodontitis (1995)Norway, AkershusMLST(TH, H)
B.cereus F3351/87Human, faeces/stools (1987) [emetic food poisoning outbreak, emetic toxin/cereulide producer]UKAFLP3 MLST(H)
B.cereus IF1-1Food (2014) [emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus WSBC10879Food, rice [emetic toxin/cereulide producer] MLST(H)
B.c_group XA13-312Food, rice (2013)China, Shanxi ProvinceMLST(P)
B.c_group XA13-176Food, rice (2013)China, Shanxi ProvinceMLST(P)
B.cereus E6345Human, lung (1979)USA, New HampshireMLST(P)
B.cereus CR27-3Food, rice (2013) [human vomiting, emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus CR110-1(2013) [human vomiting, emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus B05_010HumanFranceMLST(TH)
B.cereus 2002734478Human, blood (2004) [human septicaemia]USAMLST(P)
B.cereus NC622Other, environmental (1990) [emetic toxin/cereulide producer]JapanMLST(P)
B.cereus H2573.97Food (1997) [emetic toxin/cereulide producer; from the same food poisoning outbreak as isolate H2576.97; outbreak linked to rice]UK, EnglandMLST(P)
B.cereus F665Human, faeces/stools (1981) [emetic toxin/cereulide producer; from the same food poisoning outbreak as isolates F663, F666, and F667; outbreak linked to rice]USA, North CarolinaMLST(P)
B.cereus F3080B/87Food, chicken korma and rice (1987) [human vomiting, emetic food poisoning outbreak, emetic toxin/cereulide producer]UKMLST(P)
B.cereus BGSC6A18[Wild type isolate; USSR Research Institute for Antibiotics] MLST(P)
B.cereus SX15-28Dairy products, milk products (2015)ChinaMLST(P)
B.cereus CR15-1Food, rice (2013) [human vomiting, emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus H2576.97Food (1997) [emetic toxin/cereulide producer; from the same food poisoning outbreak as isolate H2573.97; outbreak linked to rice]UK, EnglandMLST(P)
B.cereus IF60-2Food (2014) [emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus F3942/87Food, boiled rice (1987) [human vomiting, emetic food poisoning outbreak, emetic toxin/cereulide producer]UKMLST(P)
B.cereus NC-I55Human, faeces/stools (1980) [human vomiting, emetic toxin/cereulide producer]JapanMLST(P)
B.cereus NC524Other, environmental (1983) [emetic toxin/cereulide producer]JapanMLST(P)
B.cereus CR62-4Food, rice (2013) [human vomiting, emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus CR27-1Food, rice (2013) [human vomiting, emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus NC199Other, environmental (1979) [emetic toxin/cereulide producer]JapanMLST(P)
B.cereus IF24-2Food (2014) [emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus 192Food, rice (2011)China, Zhejiang ProvinceMLST(TH)
B.cereus F95/9130Other, washing machine water rack, Birmingham Women-s Hospital (1995)UK, England, BirminghamMLST(P)
B.cereus NC1363Human, faeces/stools (2001) [human vomiting, emetic toxin/cereulide producer]JapanMLST(P)
B.cereus H9312Human, vomit (2000) [food poisoning outbreak, emetic toxin/cereulide producer]USA, MinnesotaMLST(P)
B.cereus CR5-1Food, rice (2013) [human vomiting, emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus IH41385Human, Dialysis liquid (1998) [connected to illness, emetic toxin/cereulide producer]FinlandMLST(H)
B.cereus F663Food (1981) [emetic toxin/cereulide producer; from the same food poisoning outbreak as isolates F665, F666, and F667; outbreak linked to rice]USA, North CarolinaMLST(P)
B.cereus IF46-1Food (2014) [emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus H9310Human, vomit (2000) [food poisoning outbreak, emetic toxin/cereulide producer]USA, MinnesotaMLST(P)
B.cereus G0501Food, rice (2005) [human vomiting, emetic toxin/cereulide producer]JapanMLST(P)
B.cereus AK14-66Dairy products, milk products (2014)ChinaMLST(P)
B.cereus SX15-16Dairy products, milk products (2015)ChinaMLST(P)
B.cereus XA12-5Dairy products, milk products (2012)ChinaMLST(P)
B.cereus BFDA96175Food, rice (2007)Taiwan, Taoyuan countyMLST(P)
B.cereus CR43-1Food, rice (2013) [human vomiting, emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus BGSC6A6Other, used in probiotic SUBTYL [proposed as B.cereus var. vietnami or a new species B.vietnami] MLST(P)
B.cereus SX15-22Dairy products, milk products (2015)ChinaMLST(P)
B.cereus B06_008Human, bloodFranceMLST(TH)
B.cereus CR63-3Food, rice (2013) [human vomiting, emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus NC1237Food, rice (1996) [emetic toxin/cereulide producer]JapanMLST(P)
B.cereus H3074.97Human, faeces/stools (1997) [emetic toxin/cereulide producer; from the same food poisoning outbreak as isolates H3076.97 and H3081.97; outbreak linked to rice]USA, TexasMLST(P)
B.c_group XA13-110Food, rice (2013)China, Shanxi ProvinceMLST(P)
B.cereus S710  MLST(P)
B.cereus H9311Food (2000) [food poisoning outbreak, emetic toxin/cereulide producer]USA, MinnesotaMLST(P)
B.cereus SX16-44Dairy products, milk products (2016)ChinaMLST(P)
B.cereus IF5-1Food (2014) [emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus RIVMBC62Human, Vomit (1996) [emetic food poisoning outbreak, emetic toxin/cereulide producer]NetherlandsMLST(H)
B.cereus CBC_99014Human, vomitingJapanMLST(P)
B.cereus IF51-1Food (2014) [emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus IF26-1Food (2014) [emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus B06_018Human, peritonealFranceMLST(TH)
B.cereus F667Human, faeces/stools (1981) [emetic toxin/cereulide producer; from the same food poisoning outbreak as isolates F663, F665, and F666; outbreak linked to rice]USA, North CarolinaMLST(P)
B.cereus S74Food, fried rice MLST(P)
B.cereus NC-G15Human, faeces/stools (1995) [human vomiting, emetic toxin/cereulide producer]JapanMLST(P)
B.thuringiensis IBL1297Soil (1990)USA, MarylandMLST(P)
B.cereus IF7-1Food (2014) [emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.c_group XA13-310Food, rice (2013)China, Shanxi ProvinceMLST(P)
B.cereus NC529Other, environmental (1983) [emetic toxin/cereulide producer]JapanMLST(P)
B.cereus NC1291Dairy products, milk products (1999) [human vomiting, emetic toxin/cereulide producer]JapanMLST(P)
B.cereus BC_7Food, egg product (2006)Italy (Southern)MLST(P)
B.cereus NC541Other, environmental (1983) [emetic toxin/cereulide producer]JapanMLST(P)
B.cereus CR27-2Food, rice (2013) [human vomiting, emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus NC92Human, faeces/stools (1978) [emetic toxin/cereulide producer]JapanMLST(P)
B.cereus IF78-2Food (2014) [emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus SDAGr177aDairy products, raw milk (1998) [emetic toxin/cereulide producer]SwedenMLST(H)
B.cereus CBC_04001Human, vomitingJapanMLST(P)
B.cereus CR24-1Food, rice (2013) [human vomiting, emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.c_group AK16-112Food, rice (2013)China, Shanxi ProvinceMLST(P)
B.cereus NC1247Food, rice (1996) [human vomiting, emetic toxin/cereulide producer]JapanMLST(P)
B.cereus CR73-1Food, rice (2013) [human vomiting, emetic toxin/cereulide producer]China, Hubei ProvinceMLST(P)
B.cereus NC444Other, environmental (1982) [emetic toxin/cereulide producer]JapanMLST(P)
B.cereus NC1239Food, rice (1996) [emetic toxin/cereulide producer]JapanMLST(P)
B.cereus BFDA96139Food (2007)Taiwan, Taipei countyMLST(P)
B.cereus NC604Other, environmental (1990) [emetic toxin/cereulide producer]JapanMLST(P)
B.cereus CBC_04003Human, vomitingJapanMLST(P)
B.cereus BFDA96146(2007)Taiwan, Taipei countyMLST(P)
B.cereus MHI1305Food, indian rice dish (2001) [emetic food poisoning outbreak, emetic toxin/cereulide producer]Germany, PassauAFLP3
B.cereus F1-1[Food Research Institute, University of Wisconsin-Madison]USA, Wisconsin, MadisonAFLP2


3 isolate(s) sharing typing data in supercluster 48

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.mycoides WSBC10275Soil AFLP3
B.mycoides INRAS38Soil AFLP3
B.mycoides SDA1R7Soil AFLP3


24 isolate(s) sharing typing data in supercluster 49

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.cereus ATCC10987#1Dairy products, Cheese (1930)CanadaMLST(TH, H, K, CS, P)
B.cereus KS100BcFood service operation (2014)Korea (South), Gyeonggi-doMLST(TH, H, K, CS, P)
B.cereus F3162/04Human, faeces/stools (2004) [clinical isolate] MLST(TH, H, K, CS, P)
B.cereus MOD1Bc111Other, Powdered Infant Formula (2015)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus FSLW8-0050Other, Condensed food product from evaporator (2012)USA, New YorkMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.cereus B06_009Human, cerebrospinal fluid (2008)France, ParisMLST(TH, H, K, P, clpc, dinb, purf, yhfl)
B.c_group MCCC1A06194Other, middle seawater (2009)Pacific OceanMLST(P)
B.c_group MCCC1A06192Other, bottom seawater (2009)Pacific OceanMLST(P)
B.cereus MM_2Food (2003)USAMLST(P)
B.c_group MCCC1A06939Other, bottom seawater (2010)Pacific OceanMLST(P)
B.c_group MCCC1A06182Other, bottom seawater (2009)Pacific OceanMLST(P)
B.cereus BGSC6A40Dairy products, milk products (1998) [sequences conflicting with isolate M21]FinlandMLST(P)
B.c_group MCCC1A06928Other, bottom seawater (2010)Pacific OceanMLST(P)
B.c_group MCCC1A06941Other, middle seawater (2010)Pacific OceanMLST(P)
B.c_group MCCC1A06188Other, sediments (2009)Pacific OceanMLST(P)
B.c_group MCCC1A06940Other, bottom seawater (2010)Pacific OceanMLST(P)
B.c_group MCCC1A06937Other, surface seawater (2010)Pacific OceanMLST(P)
B.c_group MCCC1A06942Other, bottom seawater (2010)Pacific OceanMLST(P)
B.c_group MCCC1A06189Other, bottom seawater (2009)Pacific OceanMLST(P)
B.c_group MCCC1A06191Other, sediments (2009)Pacific OceanMLST(P)
B.cereus B309[German Armed Forces (Bundeswehr) Institute of Microbiology]Germany, MunichMLST(H)
B.cereus BFDA96145Food (2007)Taiwan, Taipei countyMLST(P)
B.c_group MCCC1A06193Other, sediments (2009)Pacific OceanMLST(P)
B.c_group MCCC1A06187Other, surface seawater (2009)Pacific OceanMLST(P)


4 isolate(s) sharing typing data in supercluster 50

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.thuringiensis BGSC4AY1Food, black pepper powderBrazilMLST(P)
B.thuringiensis BGSC4XX1  MLST(P)
B.thuringiensis BGSC4XX2  MLST(P)
B.thuringiensis BGSC4XX3Animal, Insect, dead larvaArgentinaMLST(P)


31 isolate(s) sharing typing data in supercluster 51

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.thuringiensis HD1002Other, SewageIsraelAFLP2 MLST(TH, H, K, CS, P)
B.thuringiensis HD789  AFLP2 MLST(TH, H, K, CS, P)
B.thuringiensis BR58Plant, stored grain (2000)Brazil, LondrinaMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4Q1Animal, Insect, Culicidae (Mosquitoes) larvae (1977) [two complete genomes sequenced for this strain with identical MLST sequences]IsraelMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4AX1SoilUSSRMLST(TH, H, K, CS, P)
B.thuringiensis UBA3967  MLST(TH, H, K, CS, P)
B.thuringiensis 147Soil (2014)Brazil, Tocantins StateMLST(TH, H, K, CS, P)
B.thuringiensis IBL4222Animal, cat-s paw (1985) [israelensis-like serovar]USA, MarylandMLST(TH, H, K, CS, P)
B.thuringiensis BGSC4Q7Soil (1976) [plasmid-cured; acrystalliferous; widely used as a recombination host]IsraelMLST(TH, H, K, CS, P)
B.thuringiensis ATCC35646Other, raw sewage pond (1977)Israel, Kibbutz HuldaMLST(CS, adk, ccpa, ftsa, glpt, gmk, ilvd, mbl, muts, pta, purh, pyca1, pyca2, pyre, recf, rpob)
B.thuringiensis T05a030Soil (1987)IraqMLST(P)
B.thuringiensis IBL184Soil (1986)USA, Washington D.C.MLST(P)
B.thuringiensis IBL431Soil (1985)SpainMLST(P)
B.thuringiensis IBL3241Soil (1986)NorwayMLST(P)
B.thuringiensis IBL439Soil (1985)MoroccoMLST(P)
B.thuringiensis IBL621Soil (1987)EgyptMLST(P)
B.thuringiensis BGSC4Q3Animal, Insect, Culicidae (Mosquitoes)IsraelMLST(P)
B.thuringiensis T08025Other, grain silo dust (1988)FranceMLST(P)
B.thuringiensis IBL416Soil (1985)ChinaMLST(P)
B.thuringiensis IBL117Soil (1983)USA, WyomingMLST(P)
B.thuringiensis DSM5815Soil, sandy loam garden soilUSAMLST(P)
B.thuringiensis CCCT2259(1993)BrazilMLST(P)
B.thuringiensis KBBG5Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBD7Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBG4Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBD6Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBC1Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis KBBE4Soil, Forest soil (2000)France, VersaillesMLST(CS)
B.thuringiensis HD799  AFLP2
B.thuringiensis HD795  AFLP2
B.thuringiensis HD1008  AFLP2


2 isolate(s) sharing typing data in supercluster 52

Click here to save the colored tree file or here for the uncolored tree.

Click here to save the table as a tab-delimited text file.

StrainSourceLocationShared Typing Data
B.cereus S6616Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6570aSoil (2007)USA, Maryland, RockvilleMLST(P)


2 isolate(s) sharing typing data in supercluster 53

Click here to save the colored tree file or here for the uncolored tree.

Click here to save the table as a tab-delimited text file.

StrainSourceLocationShared Typing Data
B.toyonensis AFS015017Plant, Corn core (2014)USA, IllinoisMLST(CS, P, ccpa, ftsa, glpt, gyrb, mdh, muts, pyca1, succ)
B.toyonensis AFS071669Plant, Corn core (2014)USA, IllinoisMLST(CS, P, ccpa, ftsa, glpt, gyrb, mdh, muts, pyca1, succ)


2 isolate(s) sharing typing data in supercluster 54

Click here to save the colored tree file or here for the uncolored tree.

Click here to save the table as a tab-delimited text file.

StrainSourceLocationShared Typing Data
B.cereus 140099.DHuman, wound infection (2005)UK, ScotlandMLST(P)
B.cereus SPS2Other, kaolin (1999) MLST(P)


2 isolate(s) sharing typing data in supercluster 55

Click here to save the colored tree file or here for the uncolored tree.

Click here to save the table as a tab-delimited text file.

StrainSourceLocationShared Typing Data
B.cereus Bc219 BrazilMLST(P)
B.cereus LFB1131Animal, InsectCzechoslovakiaMLST(P)


11 isolate(s) sharing typing data in supercluster 56

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.wiedmannii AFS011149Plant, Soybean leaf (2014)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS074234Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.wiedmannii AFS079268Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS009340Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS024429Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.wiedmannii AFS013151Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS000938Plant, Corn core (2014)USA, IllinoisMLST(TH, H, CS, P, gyrb, mbl, mdh, muts, rpob)
B.wiedmannii AFS029838Plant, Corn core (2014)USA, IllinoisMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.wiedmannii AFS064234Plant, Soybean core (2014)USA, IowaMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.wiedmannii AFS023251Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, P, clpc, dinb, gdpd, yhfl)
B.wiedmannii AFS034073Plant, Soybean core (2014)USA, IowaMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)


10 isolate(s) sharing typing data in supercluster 57

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.thuringiensis IBL3780Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3785Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3729Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3776Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3689Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3760Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3725Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3779Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3719Soil (2009)USA, MarylandMLST(P)
B.thuringiensis IBL3781Soil (2009)USA, MarylandMLST(P)


8 isolate(s) sharing typing data in supercluster 58

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.cereus HWW274-2Dairy products, Milk powder (2004)GermanyMLST(TH, H, K, CS, P)
B.cereus FSLW8-0275Dairy products, Raw liquid milk and whey perm (2012)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus B4087Food, pea soup (2012)NetherlandsMLST(TH, H, K, P, dinb, gdpd, purf, yhfl)
B.c_group HZ15-64Food, rice (2016)China, Shanxi ProvinceMLST(P)
B.cereus HZ15-Y105Food, pasta (2015)China, Shaanxi ProvinceMLST(P)
B.cereus 2012-41Dairy products, milk productsChinaMLST(P)
B.cereus HZ15-Y066Food (2015)China, Shaanxi ProvinceMLST(P)
B.cereus HZ15-Y064Food (2015)China, Shaanxi ProvinceMLST(P)


20 isolate(s) sharing typing data in supercluster 59

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.wiedmannii FSLM7-0938Dairy products, raw milk (2011)USA, New YorkMLST(TH, H, K, CS, P)
B.wiedmannii FSLH8-0032Dairy food in process (2005)USA, New YorkMLST(TH, H, K, CS, P)
B.wiedmannii AFS052419Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.wiedmannii FSLH7-0353Food, finished ready-to-eat dairy food product (2005)USA, New YorkMLST(TH, H, K, CS, P)
B.wiedmannii FSLM7-1251Dairy products, raw milk (2011)USA, New YorkMLST(TH, H, K, CS, P)
B.wiedmannii FSLW8-0169Dairy products, Raw milk (2012)USA, New YorkMLST(H, CS, glpf, gmk, gyrb, ilvd, mdh, muts, purh, pyca1, pyca2, rpob, tpi)
B.wiedmannii MOD1Bc223Food, food product (2016)USA, MarylandMLST(K, CS, P, adk, ftsa, glpt, recf, succ)
B.cereus KPR-7A  MLST(TH, H, CS, gmk, gyrb, ilvd, mdh, muts, pyca1, rpob, tpi)
B.c_group BAG5X2-1SoilUSA, Massachusetts, BostonMLST(TH, H, CS, gyrb, ilvd, mdh, muts, purh, pyca1, rpob, tpi)
B.wiedmannii FSLM7-0044Dairy products, raw milk (2011)USA, New YorkMLST(TH, H, K, clpc, dinb, gdpd, gmk, tpi, yhfl)
B.cereus INRASAp  MLST(TH, H, P, clpc, dinb, gyrb, mdh, muts, purf, pyca1, rpob)
B.wiedmannii FSLP2-0558Dairy food in process (2009)USA, New YorkMLST(TH, H, P, clpc, dinb, gdpd, gyrb, mdh, muts, pyca1, rpob)
B.cereus 14294-3Food, ice cream (2004)GermanyMLST(TH, CS, P, ftsa, gyrb, mdh, pyca1, recf, rpob, succ)
B.wiedmannii FSLP4-0569Dairy food in process (2010)USA, New YorkMLST(CS, ccpa, ftsa, glpf, gmk, gyrb, mdh, muts, pta, purh, pyca1, pyca2, pyre, recf, rpob, succ, tpi)
B.c_group AH536Soil, strawberry field (1993)Norway, MossAFLP1 MLST(TH, H)
B.c_group AH572Soil, beech grove (1993)Norway, MossMLST(TH, H)
B.c_group AH519Soil, strawberry field (1993)Norway, MossMLST(TH, H)
B.thuringiensis PLBB54/4Soil (2012)PolandMLST(P)
B.thuringiensis PLBB08/1Soil (2012)PolandMLST(P)
B.c_group AH538Soil, strawberry field (1993)Norway, MossAFLP1


2 isolate(s) sharing typing data in supercluster 60

Click here to save the colored tree file or here for the uncolored tree.

Click here to save the table as a tab-delimited text file.

StrainSourceLocationShared Typing Data
B.cereus MOD1Bc229Food, food product (2016)USA, MarylandMLST(TH, H, K, CS, P)
B.cereus MOD1Bc222Food, food product (2016)USA, MarylandMLST(TH, H, K, CS, P)


4 isolate(s) sharing typing data in supercluster 61

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.cereus ISSFR-3FOther, Air (2011) MLST(TH, H, K, CS, P)
B.cereus JEM-2Other, Surface (2009) MLST(TH, H, K, CS, P)
B.cereus ISSFR-9FOther, Air (2011) MLST(TH, H, K, CS, P)
B.cereus ISSFR-23FOther, Air from the International Space Station (ISS) (2011) MLST(H, K, P, clpc, dinb, gdpd, purf, yhfl)


3 isolate(s) sharing typing data in supercluster 62

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.cereus NC401Food (1982)JapanMLST(P)
B.cereus m1280Food, vegetable soup (1987)BrazilMLST(P)
B.cereus WSBC10249Soil (1999)DenmarkMLST(P)


3 isolate(s) sharing typing data in supercluster 63

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.c_group BGSC4AZ2  MLST(P)
B.thuringiensis BGSC4AZ1(1984)CzechoslovakiaMLST(P)
B.c_group KW23[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)


19 isolate(s) sharing typing data in supercluster 64

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.pseudomycoides AFS013396Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.pseudomycoides AFS074367Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.pseudomycoides AFS058668Soil (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS055788Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.pseudomycoides AFS074519Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS042788Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides FSLH8-0534Soil (2006) [soil adjacent to bovine farm]USAMLST(TH, H, K, CS, P)
B.pseudomycoides AFS028766Plant, Corn plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS040883Soil (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.pseudomycoides AFS098856Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.pseudomycoides AFS003288Plant, Corn leaf (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.pseudomycoides AFS092115Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.pseudomycoides AFS084126Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.pseudomycoides AFS008599Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.pseudomycoides DSM12442SoilGhana or Sweden or USAMLST(TH, H, K, CS, P)
B.pseudomycoides AFS048805Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, P, clpc, dinb, gdpd, purf)
B.pseudomycoides AFS037117Soil (2014)USA, IowaMLST(TH, H, K, P, clpc, dinb, gdpd, yhfl)
B.pseudomycoides AFS054473Plant, Corn core (2014)USA, North CarolinaMLST(H, clpc, gdpd, glpf, gmk, gyrb, mbl, mdh, panc, purf, purh, pyca1, pyca2, rpob, yhfl)
B.c_group FSLK6-0220Animal, cattleUSAMLST(P)


28 isolate(s) sharing typing data in supercluster 65

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.wiedmannii AFS014747Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.wiedmannii AFS057001Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.wiedmannii AFS053866Plant, Corn leaf (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus RIVMBC126#1Human, faeces/stools (1999) [diarrheal food poisoning; two complete genomes sequenced for this strain with different MLST sequences; strain sequenced by INRA-MIG, Unit MIG (Mathematique, Informatique et Genome), Jouy en Josas, France; sequences conflicting with isolate RIVMBC126#2]NetherlandsMLST(TH, H, K, CS, P)
B.wiedmannii AFS050757Plant, Soybean root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.wiedmannii AFS022373Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.wiedmannii RIVMBC126#2Human, faeces/stools (1999) [diarrheal food poisoning; two complete genomes sequenced for this strain with different MLST sequences; strain sequenced by Lehrstuhl fuer Mikrobielle Oekologie, Technische Universitaet Muenchen, Freising, Germany; sequences conflicting with isolate RIVMBC126#1]NetherlandsMLST(TH, H, K, CS, P)
B.wiedmannii AFS026518Plant, soybean seed (2014)USA, IowaMLST(TH, H, K, P, clpc, dinb, gdpd, yhfl)
B.wiedmannii AFS061931Soil (2014)USA, New YorkMLST(TH, H, K, CS, gmk, purh, tpi)
B.wiedmannii AFS029692Plant, core (2014)USA, North CarolinaMLST(H, K, CS, gmk, ilvd, pta, purh, pyca2, tpi)
B.cereus AFS034338Plant, Core Other Plant (2014)USA, North CarolinaMLST(H, K, CS, gmk, ilvd, pta, purh, pyca2, tpi)
B.wiedmannii AFS020690Food, Mushroom (2013)USA, IowaMLST(TH, H, K, CS, gmk, ilvd, purh)
B.wiedmannii AFS029396Plant, Corn core (2014)USA, IllinoisMLST(TH, H, CS, P, gyrb, mbl, mdh, muts, rpob)
B.wiedmannii AFS018713Plant, Corn (2014)USA, IowaMLST(TH, H, CS, P, mbl, mdh, muts, pyca1, rpob)
B.wiedmannii AFS063010(2014)USA, North CarolinaMLST(H, K, CS, glpf, ilvd, purh, pyca2, tpi)
B.wiedmannii AFS080672Soil (2014)USA, New YorkMLST(H, K, clpc, gdpd, gmk, ilvd, panc, pta, purf, purh, pyca2, tpi, yhfl)
B.wiedmannii AFS078322Soil (2014)USA, New YorkMLST(TH, H, P, clpc, dinb, gdpd, gyrb, mdh, muts, purf, pyca1, rpob)
B.wiedmannii AFS045501Soil (2014)USA, New YorkMLST(TH, H, K, P, clpc, purf, yhfl)
B.wiedmannii AFS048126Plant, Corn root (2014)USA, IowaMLST(H, K, CS, glpf, gmk, ilvd, pyca2, tpi)
B.wiedmannii AFS006440Plant, Soybean core (2014)USA, IowaMLST(H, P, clpc, dinb, gdpd, gyrb, mdh, muts, purf, pyca1, rpob, yhfl)
B.wiedmannii AFS045844Plant, core (2014)USA, North CarolinaMLST(TH, H, CS, gmk, gyrb, mbl, mdh, purh, pyca1, rpob, tpi)
B.wiedmannii AFS002659Soil (2014)USA, New YorkMLST(K, CS, adk, ccpa, ftsa, glpf, gmk, ilvd, pta, purh, pyca2, recf, succ)
B.wiedmannii AFS017127Plant, core (2014)USA, North CarolinaMLST(TH, H, CS, gmk, gyrb, mbl, mdh, muts, rpob, tpi)
B.wiedmannii AFS009197Soil (2014)USA, New YorkMLST(TH, H, K, clpc, dinb, gmk, ilvd, purh)
B.wiedmannii AFS010157Plant, Corn core (2014)USA, IllinoisMLST(TH, K, dinb, ftsa, gmk, purf, purh, recf, tpi, yhfl)
B.wiedmannii AFS077115Soil (2014)USA, New YorkMLST(H, clpc, gmk, gyrb, ilvd, mdh, muts, panc, pta, pyca1, rpob, tpi, yhfl)
B.wiedmannii AFS066156Plant, core (2014)USA, North CarolinaMLST(H, clpc, dinb, gmk, gyrb, mbl, mdh, muts, panc, pta, purh, pyca1, pyca2)
B.thuringiensis IBL3720Soil (2009)USA, MarylandMLST(P)


2 isolate(s) sharing typing data in supercluster 66

Click here to save the colored tree file or here for the uncolored tree.

Click here to save the table as a tab-delimited text file.

StrainSourceLocationShared Typing Data
B.thuringiensis Bt183 BrazilMLST(P)
B.thuringiensis LFB858Food, black pepper (1994)BrazilMLST(P)


2 isolate(s) sharing typing data in supercluster 67

Click here to save the colored tree file or here for the uncolored tree.

Click here to save the table as a tab-delimited text file.

StrainSourceLocationShared Typing Data
B.c_group KW25[Children-s Hospital Oakland Research Institute (CHORI)]USA, CaliforniaMLST(P)
B.thuringiensis T24001 MexicoMLST(P)


6 isolate(s) sharing typing data in supercluster 68

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.cereus BC_19Food, egg product (2006)Italy (Southern)MLST(P)
B.cereus BC_2Food, egg product (2006)Italy (Southern)MLST(P)
B.cereus BC_6Food, egg product (2006)Italy (Southern)MLST(P)
B.cereus BC_16Food, egg product (2006)Italy (Southern)MLST(P)
B.cereus BC_23Food, egg product (2006)Italy (Southern)MLST(P)
B.cereus BC_15Food, egg product (2006)Italy (Southern)MLST(P)


5 isolate(s) sharing typing data in supercluster 69

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.cereus AFS024404Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS026312Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS034468Soil (2014)USA, New YorkMLST(H, K, CS, gmk, ilvd, pta, purh, pyca2, tpi)
B.cereus AFS080704Plant, core (2014)USA, North CarolinaMLST(H, K, CS, gmk, pta, purh, pyca2, tpi)
B.cereus AFS014678Soil (2014)USA, New YorkMLST(TH, H, CS, gyrb, ilvd, mdh, muts, purh, pyca1, rpob, tpi)


4 isolate(s) sharing typing data in supercluster 70

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.c_group B4o6Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.cereus S6621Soil (2007)USA, Maryland, RockvilleMLST(P)
B.c_group A4o6Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)
B.c_group B4o1Plant, leaves of broad-leaved dock (Rumex obtusifolius) (2002)UK, England, BerkshireMLST(P)


6 isolate(s) sharing typing data in supercluster 71

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.cereus NVH0597/99Food, spice mix (1999) [strain believed to be the cause of a diarrheal food poisoning outbreak]NorwayMLST(TH, H, K, CS, P)
B.cereus MOD1Bc122Food, Paprika (2015)USA, MarylandMLST(TH, H, K, CS, P)
B.anthracis RIT375Plant, Insulin plant/Spiral flag (Costus igneus) Internal Stem Tissue (2015)Puerto RicoMLST(TH, CS, P, ftsa, gyrb, mdh, muts, pyca1, pyre, rpob, succ)
B.cereus B5780Human, blood (1970)USA, TexasMLST(P)
B.cereus 191560.KHuman, calf tissue (2003) [human wound infection following insect bite]UK, Scotland, GlasgowMLST(P)
B.cereus B06_020Human, woundFranceMLST(TH)


4 isolate(s) sharing typing data in supercluster 72

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.toyonensis AFS045425Plant, Soybean leaf (2014)USA, MissouriMLST(TH, H, K, CS, P)
B.toyonensis AFS061268Plant, Soybean leaf (2014)USA, MinnesotaMLST(TH, H, K, CS, P)
B.toyonensis AFS044782Plant, Soybean leaf (2014)USA, IowaMLST(H, CS, glpf, gmk, gyrb, ilvd, mdh, muts, purh, pyca1, pyca2, tpi)
B.toyonensis AFS096303Plant, Soybean leaf (2014)USA, MinnesotaMLST(H, clpc, dinb, glpf, gmk, gyrb, ilvd, mdh, muts, panc, purh, pyca1, pyca2, rpob, yhfl)


2 isolate(s) sharing typing data in supercluster 73

Click here to save the colored tree file or here for the uncolored tree.

Click here to save the table as a tab-delimited text file.

StrainSourceLocationShared Typing Data
B.mycoides R-22293Dairy products, raw milk AFLP3
B.mycoides R-22292Dairy products, raw milk AFLP3


2 isolate(s) sharing typing data in supercluster 74

Click here to save the colored tree file or here for the uncolored tree.

Click here to save the table as a tab-delimited text file.

StrainSourceLocationShared Typing Data
B.cereus AFS046754Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS079194Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)


2 isolate(s) sharing typing data in supercluster 75

Click here to save the colored tree file or here for the uncolored tree.

Click here to save the table as a tab-delimited text file.

StrainSourceLocationShared Typing Data
B.cereus B06_025Human, bloodGuyaneMLST(TH)
B.cereus B06_031HumanMartiniqueMLST(TH)


3 isolate(s) sharing typing data in supercluster 76

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.cereus 1Y58Dairy products, milk products (2016)China, Shaanxi ProvinceMLST(P)
B.cereus 1Y55Dairy products, milk products (2016)China, Shaanxi ProvinceMLST(P)
B.cereus 5L45Dairy products, milk products (2016)China, Shaanxi ProvinceMLST(P)


12 isolate(s) sharing typing data in supercluster 77

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.toyonensis BacAerHuman, biopsy of an epithelial lesionBrazil, Rio de JaneiroMLST(K, P, adk, ccpa, clpc, dinb, ftsa, gdpd, panc, pyre, succ, yhfl)
B.cereus Rock3-28SoilUSA, Maryland, RockvilleMLST(K, P, adk, ccpa, clpc, dinb, ftsa, gdpd, panc, pyre, succ, yhfl)
B.cereus S6623Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6645Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6618Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6620Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6563Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6563aSoil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus S6576Soil (2007)USA, Maryland, RockvilleMLST(P)
B.cereus BFDA96174(2007)Taiwan, Hsinchu cityMLST(P)
B.cereus CCBH7517(2011)Brazil, Rio de JaneiroMLST(P)
B.cereus S6603Soil (2007)USA, Maryland, RockvilleMLST(P)


7 isolate(s) sharing typing data in supercluster 78

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.cereus AFS067272Plant, Weed plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS077416Plant, Weed plant (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS016912Plant, core (2014)USA, North CarolinaMLST(TH, H, CS, P, gyrb, mdh, pyca1, rpob)
B.cereus AFS068308Plant, tree leaf (2014)USA, North CarolinaMLST(TH, H, K, clpc, dinb, gdpd, gmk, ilvd, purf)
B.cereus AFS030055Plant, tree leaf (2014)USA, North CarolinaMLST(CS, P, adk, ftsa, glpt, gyrb, pyca1, pyre, recf, rpob, succ)
B.cereus AFS074395Plant, tree leaf (2014)USA, North CarolinaMLST(H, clpc, gdpd, gmk, gyrb, ilvd, mdh, muts, panc, purf, purh, pyca1, pyca2, rpob, tpi)
B.cereus Rock3-44SoilUSA, Maryland, RockvilleMLST(TH, clpc, gdpd, gmk, gyrb, purf, purh, pyca1, recf, rpob, succ, tpi)


2 isolate(s) sharing typing data in supercluster 79

Click here to save the colored tree file or here for the uncolored tree.

Click here to save the table as a tab-delimited text file.

StrainSourceLocationShared Typing Data
B.thuringiensis Bt152 BrazilMLST(P)
B.thuringiensis LFB563SoilBrazilMLST(P)


2 isolate(s) sharing typing data in supercluster 80

Click here to save the colored tree file or here for the uncolored tree.

Click here to save the table as a tab-delimited text file.

StrainSourceLocationShared Typing Data
B.cereus BFDA96167Food, rice (2007)Taiwan, Taipei countyMLST(P)
B.cereus BFDA96161Food, rice (2007)Taiwan, Taipei countyMLST(P)


2 isolate(s) sharing typing data in supercluster 81

Click here to save the colored tree file or here for the uncolored tree.

Click here to save the table as a tab-delimited text file.

StrainSourceLocationShared Typing Data
B.c_group AH587Soil, beech grove (1993)Norway, MossAFLP1
B.c_group AH588Soil, beech grove (1993)Norway, MossAFLP1


2 isolate(s) sharing typing data in supercluster 82

Click here to save the colored tree file or here for the uncolored tree.

Click here to save the table as a tab-delimited text file.

StrainSourceLocationShared Typing Data
B.c_group AH677Soil, heather soil (1994)Norway, TromsoeAFLP1
B.c_group AH680Soil, heather soil (1994)Norway, TromsoeAFLP1


2 isolate(s) sharing typing data in supercluster 83

Click here to save the colored tree file or here for the uncolored tree.

Click here to save the table as a tab-delimited text file.

StrainSourceLocationShared Typing Data
B.thuringiensis HBF-18Soil (2003)China, Hebei, BaodingMLST(TH, H, K, CS, P)
B.thuringiensis Fcd114Soil (2003)China, Hebei, BaodingMLST(TH, H, K, CS, P)


2 isolate(s) sharing typing data in supercluster 84

Click here to save the colored tree file or here for the uncolored tree.

Click here to save the table as a tab-delimited text file.

StrainSourceLocationShared Typing Data
B.cereus AFS010695Soil (2014)USA, North CarolinaMLST(TH, ftsa, gdpd, gmk, gyrb, muts, purf, purh, pyca1, pyre, rpob, succ, tpi)
B.c_group BAG2X1-3SoilUSA, Massachusetts, BostonMLST(TH, ftsa, gdpd, gmk, gyrb, muts, purf, purh, pyca1, pyre, rpob, succ, tpi)


48 isolate(s) sharing typing data in supercluster 85

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.cereus AFS025909Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS003338Plant, Corn (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS031264Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS004748Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS077972Plant, Soybean root (2013)USA, MinnesotaMLST(TH, H, K, CS, P)
B.cereus AFS025485Plant, Corn (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS007868Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS086892Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS037584Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus AFS040984Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus AFS020233Plant, Corn root (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus AFS032151Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS014847Plant, Corn (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS000144Plant, Corn (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS028514Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus AFS063866Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS074370Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS028516Plant, Corn leaf (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus AFS027898Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS011202Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS094413Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS026439Plant, Soybean root (2014)USA, MissouriMLST(TH, H, K, CS, P)
B.cereus AFS023425Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS047135Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS051030(2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS009443Plant, Corn core (2014)USA, IllinoisMLST(TH, H, K, CS, P)
B.cereus AFS082524Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS050653Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS008423Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS095084Plant, Soybean root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS036159Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS060621Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS024540Soil (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS006340Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS079942Plant, Corn root (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS000175Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS017700Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS024847Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS048756Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS007234Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS046388Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS091626Plant, Soybean core (2014)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS019247Plant, Corn (2014)USA, IowaMLST(TH, H, K, P, clpc, gdpd, purf, yhfl)
B.cereus AFS074868Plant, Corn leaf (2014)USA, IowaMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.cereus AFS065445Plant, Corn core (2014)USA, North CarolinaMLST(CS, adk, ccpa, ftsa, glpt, gyrb, mdh, muts, pta, purh, pyca1, pyca2, pyre, recf)
B.cereus 163770.KHuman, wound infection (2005)UK, ScotlandMLST(P)
B.cereus F5157Food (1983) [diarrheal food poisoning]USA, CaliforniaMLST(P)
B.cereus ATCC6464Soil MLST(CS)


10 isolate(s) sharing typing data in supercluster 86

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.cereus AFS041242Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.c_group BAG2O-3SoilUSA, Massachusetts, BostonMLST(TH, H, K, CS, P)
B.c_group B5-2SoilChinaMLST(TH, H, K, CS, P)
B.cereus AFS047977Plant, core (2014)USA, North CarolinaMLST(TH, H, K, CS, P)
B.cereus AFS077649Soil (2014)USA, New YorkMLST(TH, H, K, CS, P)
B.cereus AFS069564Plant, Corn root (2013)USA, IowaMLST(TH, H, K, CS, P)
B.cereus AFS086766(2014)USA, North CarolinaMLST(TH, H, CS, P, gyrb, mdh, muts, pyca1, rpob)
B.cereus AFS038165Soil (2014)USA, New YorkMLST(K, CS, P, adk, ccpa, ftsa, pyre, recf, succ)
B.cereus AFS040108Plant, Oats plant (2014)USA, North CarolinaMLST(TH, H, CS, P, mdh, muts, pyca1, rpob)
B.cereus AFS009781Soil (2014)USA, New YorkMLST(H, CS, glpf, gmk, gyrb, ilvd, muts, purh, pyca1, pyca2, rpob, tpi)


3 isolate(s) sharing typing data in supercluster 87

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.cereus BC_20Food, egg product (2006)Italy (Southern)MLST(P)
B.cereus BC_22Food, egg product (2006)Italy (Southern)MLST(P)
B.cereus BC_13Food, egg product (2006)Italy (Southern)MLST(P)


2 isolate(s) sharing typing data in supercluster 88

Click here to save the colored tree file or here for the uncolored tree.

Click here to save the table as a tab-delimited text file.

StrainSourceLocationShared Typing Data
B.thuringiensis HD41  AFLP2
B.thuringiensis HD288  AFLP2


2 isolate(s) sharing typing data in supercluster 89

Click here to save the colored tree file or here for the uncolored tree.

Click here to save the table as a tab-delimited text file.

StrainSourceLocationShared Typing Data
B.cereus UHB154Food, cake (2000) [diarrheal food poisoning outbreak]FinlandAFLP3
B.cereus NVH0230/00Food, mushroom stew (2000) [diarrheal food poisoning outbreak]NorwayAFLP3


4 isolate(s) sharing typing data in supercluster 90

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.thuringiensis HD529 JapanAFLP2
B.thuringiensis HD526 JapanAFLP2
B.thuringiensis HD528 JapanAFLP2
B.thuringiensis HD527 JapanAFLP2


3 isolate(s) sharing typing data in supercluster 91

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.cereus 644-715-5Human, blood (2003) [human pyrexia]JapanMLST(P)
B.cereus BCT1 JapanMLST(P)
B.cereus BCT2 JapanMLST(P)


2 isolate(s) sharing typing data in supercluster 92

Click here to save the colored tree file or here for the uncolored tree.

Click here to save the table as a tab-delimited text file.

StrainSourceLocationShared Typing Data
B.cereus F2404B/79(1979) [diarrheal food poisoning outbreak] MLST(P)
B.thuringiensis K15_252(2015)Korea (South)MLST(P)


3 isolate(s) sharing typing data in supercluster 93

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.thuringiensis HD577 ChinaAFLP2
B.thuringiensis HD501 ChinaAFLP2
B.thuringiensis HD536 ChinaAFLP2


2 isolate(s) sharing typing data in supercluster 94

Click here to save the colored tree file or here for the uncolored tree.

Click here to save the table as a tab-delimited text file.

StrainSourceLocationShared Typing Data
B.c_group AH618Soil, heather soil (1994)Norway, Singsaas/SaeterengAFLP1
B.c_group AH645Soil, heather soil (1994)Norway, SteigenAFLP1


3 isolate(s) sharing typing data in supercluster 95

Click here to save the colored tree file or here for the uncolored tree.
Click here to save the colored subtree file or here for uncolored subtree.
Click here to save the table as a tab-delimited text file.
StrainSourceLocationShared Typing Data
B.cereus 58R4Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. hereward grown in a plot in which the previous crop was wheat (Triticum aestivum) var. cadenza]UK, England, RothamstedMLST(P)
B.c_group D10-6.A.iSoil (2006)UKMLST(P)
B.cereus 58R2Soil or plant [Isolated from rhizosphere of wheat (Triticum aestivum) var. hereward grown in a plot in which the previous crop was wheat (Triticum aestivum) var. cadenza]UK, England, RothamstedMLST(P)


8 isolate(s) sharing typing data in supercluster 96

Click here to save the colored tree file or here for the uncolored tree.